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Search of human proteins with 169216745
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169216745 PREDICTED: similar to hCG1653500 [Homo sapiens]
(133 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169216502 PREDICTED: similar to hCG1653500 [Homo sapiens] 268 7e-73
gi|169216745 PREDICTED: similar to hCG1653500 [Homo sapiens] 268 7e-73
gi|21735569 claspin [Homo sapiens] 40 4e-04
gi|71040098 Rho GTPase activating protein 30 isoform 1 [Homo sap... 39 0.001
gi|4503351 DNA (cytosine-5-)-methyltransferase 1 isoform b [Homo... 37 0.005
gi|145279222 WD repeat domain 66 [Homo sapiens] 37 0.006
gi|32484979 adaptor-related protein complex 3, beta 1 subunit [H... 36 0.008
gi|150170670 piccolo isoform 2 [Homo sapiens] 36 0.008
gi|150378539 piccolo isoform 1 [Homo sapiens] 36 0.008
gi|83035129 coiled-coil domain containing 108 isoform 1 [Homo sa... 36 0.008
gi|195927037 DNA (cytosine-5-)-methyltransferase 1 isoform a [Ho... 35 0.013
gi|21396500 HIRA interacting protein 3 [Homo sapiens] 35 0.013
gi|221219020 NYD-SP11 protein [Homo sapiens] 35 0.023
gi|239754909 PREDICTED: hypothetical protein [Homo sapiens] 35 0.023
gi|14195601 protein phosphatase 1, regulatory (inhibitor) subuni... 35 0.023
gi|4505319 protein phosphatase 1, regulatory (inhibitor) subunit... 35 0.023
gi|55741677 SET domain containing 1A [Homo sapiens] 34 0.030
gi|148746195 trichohyalin [Homo sapiens] 34 0.030
gi|20336205 transcriptional regulator ATRX isoform 2 [Homo sapiens] 34 0.030
gi|20336209 transcriptional regulator ATRX isoform 1 [Homo sapiens] 34 0.030
gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Hom... 34 0.030
gi|223718207 ets variant gene 3 isoform 1 [Homo sapiens] 34 0.030
gi|157168329 formin 1 [Homo sapiens] 34 0.039
gi|4758172 dentin matrix acidic phosphoprotein 1 isoform 1 precu... 34 0.039
gi|121256621 dentin matrix acidic phosphoprotein 1 isoform 2 pre... 34 0.039
gi|195976805 hypoxia up-regulated 1 precursor [Homo sapiens] 34 0.039
gi|5453832 hypoxia up-regulated 1 precursor [Homo sapiens] 34 0.039
gi|156104891 general transcription factor IIF, polypeptide 1, 74... 34 0.039
gi|32967605 bromodomain adjacent to zinc finger domain, 1A isofo... 34 0.039
gi|32967603 bromodomain adjacent to zinc finger domain, 1A isofo... 34 0.039
>gi|169216502 PREDICTED: similar to hCG1653500 [Homo sapiens]
Length = 133
Score = 268 bits (686), Expect = 7e-73
Identities = 133/133 (100%), Positives = 133/133 (100%)
Query: 1 MEENIQISRAEGKSTAKASRWPVKHKPPTQLSRDNHPQHQRGEEEEGPLSTKIQKPSEDS 60
MEENIQISRAEGKSTAKASRWPVKHKPPTQLSRDNHPQHQRGEEEEGPLSTKIQKPSEDS
Sbjct: 1 MEENIQISRAEGKSTAKASRWPVKHKPPTQLSRDNHPQHQRGEEEEGPLSTKIQKPSEDS 60
Query: 61 QDNPEGKRESLREFQEKSHSRKTAASRKPEEGRGPTLSSHSDQLNEELNQKEPQQDQESE 120
QDNPEGKRESLREFQEKSHSRKTAASRKPEEGRGPTLSSHSDQLNEELNQKEPQQDQESE
Sbjct: 61 QDNPEGKRESLREFQEKSHSRKTAASRKPEEGRGPTLSSHSDQLNEELNQKEPQQDQESE 120
Query: 121 ETSTISSVSLDSQ 133
ETSTISSVSLDSQ
Sbjct: 121 ETSTISSVSLDSQ 133
>gi|169216745 PREDICTED: similar to hCG1653500 [Homo sapiens]
Length = 133
Score = 268 bits (686), Expect = 7e-73
Identities = 133/133 (100%), Positives = 133/133 (100%)
Query: 1 MEENIQISRAEGKSTAKASRWPVKHKPPTQLSRDNHPQHQRGEEEEGPLSTKIQKPSEDS 60
MEENIQISRAEGKSTAKASRWPVKHKPPTQLSRDNHPQHQRGEEEEGPLSTKIQKPSEDS
Sbjct: 1 MEENIQISRAEGKSTAKASRWPVKHKPPTQLSRDNHPQHQRGEEEEGPLSTKIQKPSEDS 60
Query: 61 QDNPEGKRESLREFQEKSHSRKTAASRKPEEGRGPTLSSHSDQLNEELNQKEPQQDQESE 120
QDNPEGKRESLREFQEKSHSRKTAASRKPEEGRGPTLSSHSDQLNEELNQKEPQQDQESE
Sbjct: 61 QDNPEGKRESLREFQEKSHSRKTAASRKPEEGRGPTLSSHSDQLNEELNQKEPQQDQESE 120
Query: 121 ETSTISSVSLDSQ 133
ETSTISSVSLDSQ
Sbjct: 121 ETSTISSVSLDSQ 133
>gi|21735569 claspin [Homo sapiens]
Length = 1339
Score = 40.4 bits (93), Expect = 4e-04
Identities = 29/128 (22%), Positives = 55/128 (42%), Gaps = 4/128 (3%)
Query: 3 ENIQISRAEGKSTAKASRWPVKHKPPTQLSRDNHPQHQRGEEEEGPLSTKIQKPSEDSQD 62
E +Q+ +A+ + K R+ + K DN + EEEE ++ + ++ E+ +
Sbjct: 592 EKLQVLKAKLQEAMKLRRFEERQKRQALFKLDNEDGFEEEEEEEEEMTDESEEDGEEKVE 651
Query: 63 NPEGKRESLREFQEKSHSRKTAASRKPEEGRGPTLSSHSDQLNEELNQKEPQQDQESEET 122
E K E L E +EK + +++ E LSS + +E + D SE
Sbjct: 652 KEE-KEEELEEEEEKEEEEEEEGNQETAEF---LLSSEEIETKDEKEMDKENNDGSSEIG 707
Query: 123 STISSVSL 130
+ +S+
Sbjct: 708 KAVGFLSV 715
>gi|71040098 Rho GTPase activating protein 30 isoform 1 [Homo
sapiens]
Length = 1101
Score = 38.9 bits (89), Expect = 0.001
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 43 EEEEGPLSTKIQ--KPSED------SQDNP----EGKRESLREFQEKSHSRKTAASRKPE 90
EE EG TK++ K SED SQ+ EG RE +EKS +K A S + +
Sbjct: 673 EEAEGSPETKVEAGKASEDRGEAGGSQETKVRLREGSREETEAKEEKSKGQKKADSMEAK 732
Query: 91 EGRGPTLSSHSDQLNEELNQKEPQQDQESE 120
P ++D+ +E+ ++E +Q +E++
Sbjct: 733 GVEEPGGDEYTDEKEKEIEREEDEQREEAQ 762
>gi|4503351 DNA (cytosine-5-)-methyltransferase 1 isoform b [Homo
sapiens]
Length = 1616
Score = 37.0 bits (84), Expect = 0.005
Identities = 29/127 (22%), Positives = 53/127 (41%), Gaps = 20/127 (15%)
Query: 3 ENIQISRAEGKSTAKASRWPVKHKPPTQLSRDNHPQHQRGEEEEGPLSTKIQKPSEDSQD 62
EN +R+E + A + PP LS+ P+ + + E P +
Sbjct: 108 ENGNQARSEARRVGMADA----NSPPKPLSKPRTPRRSKSDGEAKP----------EPSP 153
Query: 63 NPEGKRESLREFQEKSHSRKTAASRKPEEGRGPTLSSHSDQLNEELNQKEPQQDQESEET 122
+P R+S R+ SH K A RKP+E S + +E + +++ QD++
Sbjct: 154 SPRITRKSTRQTTITSHFAKGPAKRKPQE------ESERAKSDESIKEEDKDQDEKRRRV 207
Query: 123 STISSVS 129
++ V+
Sbjct: 208 TSRERVA 214
Score = 29.6 bits (65), Expect = 0.74
Identities = 23/114 (20%), Positives = 50/114 (43%), Gaps = 18/114 (15%)
Query: 38 QHQRGEEEEGPLSTKIQKPSEDSQDNPEGKRESLR--------------EFQEKSHSRKT 83
+ +R E+EE L ++ ++P+ + E RE+ E + +S +
Sbjct: 234 EEERDEKEEKRLRSQTKEPTPKQKLKEEPDREARAGVQADEDEDGDEKDEKKHRSQPKDL 293
Query: 84 AASRKPEEGR----GPTLSSHSDQLNEELNQKEPQQDQESEETSTISSVSLDSQ 133
AA R+PEE P +S D+ +E +++ + +E+ + ++S+
Sbjct: 294 AAKRRPEEKEPEKVNPQISDEKDEDEKEEKRRKTTPKEPTEKKMARAKTVMNSK 347
>gi|145279222 WD repeat domain 66 [Homo sapiens]
Length = 1149
Score = 36.6 bits (83), Expect = 0.006
Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 12/112 (10%)
Query: 28 PTQLSRDNHPQHQRGEEEEGPLSTKIQKPSEDSQDNPEGKRESLREFQEKSHSRKTAASR 87
P + + +N + EEE P +++ P ++S+D+ RES E RKT
Sbjct: 8 PREATGENGETEMKEEEEPNPNYKEVEDPQQESKDDTIAWRESQEE------ERKTGEEE 61
Query: 88 KPEEGR--GPTLSSHSDQLNEELNQKEPQQDQE----SEETSTISSVSLDSQ 133
EEG+ + +++ E+ +KE QE + T S + L++Q
Sbjct: 62 GEEEGKEDKKIVMEETEEKAGEVQEKEASGIQEETTVEPQEVTASMIRLETQ 113
>gi|32484979 adaptor-related protein complex 3, beta 1 subunit [Homo
sapiens]
Length = 1094
Score = 36.2 bits (82), Expect = 0.008
Identities = 28/119 (23%), Positives = 47/119 (39%), Gaps = 2/119 (1%)
Query: 16 AKASRWPVKHKPPTQLSRDNHPQHQRGEEEEGPLSTKIQKPSEDSQDNPEGKRESLREFQ 75
AK K ++ D+ E E G S + + E+ N + +S E Q
Sbjct: 666 AKQENSAKKFYSESEEEEDSSDSSSDSESESGSESGEQGESGEEGDSNEDSSEDSSSE-Q 724
Query: 76 EKSHSRKTAASRKPEEGRGPTLSSHSDQLN-EELNQKEPQQDQESEETSTISSVSLDSQ 133
+ R++ K R SD + E+ N+K D ++E+S+I S DS+
Sbjct: 725 DSESGRESGLENKRTAKRNSKAKGKSDSEDGEKENEKSKTSDSSNDESSSIEDSSSDSE 783
Score = 26.9 bits (58), Expect = 4.8
Identities = 20/90 (22%), Positives = 38/90 (42%), Gaps = 3/90 (3%)
Query: 2 EENIQISRAEGKSTAKASRWPVKHKPPTQLSRDNHPQHQRGE--EEEGPLSTKIQKPSED 59
E++ + R G + ++ K K + S D ++++ + + S+ I+ S D
Sbjct: 723 EQDSESGRESGLENKRTAKRNSKAKGKSD-SEDGEKENEKSKTSDSSNDESSSIEDSSSD 781
Query: 60 SQDNPEGKRESLREFQEKSHSRKTAASRKP 89
S+ E + ES K +KT R P
Sbjct: 782 SESESEPESESESRRVTKEKEKKTKQDRTP 811
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 36.2 bits (82), Expect = 0.008
Identities = 38/154 (24%), Positives = 65/154 (42%), Gaps = 34/154 (22%)
Query: 8 SRAEGKSTAKASRWPVKHKPPTQLS----RDNHPQHQRGEEEE---------GPLSTKIQ 54
SR EG S+ AS + P + S D+ P H++GE ++ GPL I+
Sbjct: 1712 SRGEGSSSLHASSFTPGTSPTSVSSLDEDSDSSPSHKKGESKQQRKARHRPHGPLLPTIE 1771
Query: 55 KPSEDSQDNPE-------GKRESLREFQEKSHSRKT-------AASRKPEEGRGPTL--- 97
SE+ + E K+ + + Q KS S+K+ A R+ E + P
Sbjct: 1772 DSSEEEELREEEELLKEQEKQREIEQQQRKSSSKKSKKDKDELRAQRRRERPKTPPSNLS 1831
Query: 98 ----SSHSDQLNEELNQKEPQQDQESEETSTISS 127
+S +++L + +E + SE + +I S
Sbjct: 1832 PIEDASPTEELRQAAEMEELHRSSCSEYSPSIES 1865
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 36.2 bits (82), Expect = 0.008
Identities = 38/154 (24%), Positives = 65/154 (42%), Gaps = 34/154 (22%)
Query: 8 SRAEGKSTAKASRWPVKHKPPTQLS----RDNHPQHQRGEEEE---------GPLSTKIQ 54
SR EG S+ AS + P + S D+ P H++GE ++ GPL I+
Sbjct: 1712 SRGEGSSSLHASSFTPGTSPTSVSSLDEDSDSSPSHKKGESKQQRKARHRPHGPLLPTIE 1771
Query: 55 KPSEDSQDNPE-------GKRESLREFQEKSHSRKT-------AASRKPEEGRGPTL--- 97
SE+ + E K+ + + Q KS S+K+ A R+ E + P
Sbjct: 1772 DSSEEEELREEEELLKEQEKQREIEQQQRKSSSKKSKKDKDELRAQRRRERPKTPPSNLS 1831
Query: 98 ----SSHSDQLNEELNQKEPQQDQESEETSTISS 127
+S +++L + +E + SE + +I S
Sbjct: 1832 PIEDASPTEELRQAAEMEELHRSSCSEYSPSIES 1865
>gi|83035129 coiled-coil domain containing 108 isoform 1 [Homo
sapiens]
Length = 1925
Score = 36.2 bits (82), Expect = 0.008
Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 10/107 (9%)
Query: 24 KHKPPTQLSRDNHP---QHQRGEEEEGPLSTKIQKPSEDSQDNPEGKRESLREFQEKSHS 80
K K P + +++P + + GEEE+G + + E+ ++ E + E +EK
Sbjct: 1742 KGKQPKEDRPEHYPGLGKKEEGEEEKGEEEEEELEEEEEEEEETEEEELGKEEIEEKEEE 1801
Query: 81 RKTAASRKPEEGRGPTLSSHSD-----QLNEELN--QKEPQQDQESE 120
R + G GPT S Q ++LN KE Q+ E E
Sbjct: 1802 RDEKEEKVSWAGIGPTPQPESQESMQWQWQQQLNVMVKEEQEQDEKE 1848
Score = 26.9 bits (58), Expect = 4.8
Identities = 17/73 (23%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Query: 52 KIQKPSEDSQDNPEGKRESLREFQEKSHSRKTAASRKPEEGRGPTLSSHSDQLN-EELNQ 110
K ++P ED ++ G + +EK + + EE + ++L EE+ +
Sbjct: 1742 KGKQPKEDRPEHYPGLGKKEEGEEEKGEEEEEELEEEEEEEE----ETEEEELGKEEIEE 1797
Query: 111 KEPQQDQESEETS 123
KE ++D++ E+ S
Sbjct: 1798 KEEERDEKEEKVS 1810
>gi|195927037 DNA (cytosine-5-)-methyltransferase 1 isoform a [Homo
sapiens]
Length = 1632
Score = 35.4 bits (80), Expect = 0.013
Identities = 30/133 (22%), Positives = 58/133 (43%), Gaps = 16/133 (12%)
Query: 3 ENIQISRAEGKSTAKASRWPVKHKPPTQLSRDNHPQHQRGEEE-----EGPLS-TKIQKP 56
EN +R+E + A + PP LS+ P+ + + E + P S +++
Sbjct: 108 ENGNQARSEARRVGMADA----NSPPKPLSKPRTPRRSKSDGEAKRSRDPPASASQVTGI 163
Query: 57 SEDSQDNPEGKRESLREFQEKSHSRKTAASRKPEEGRGPTLSSHSDQLNEELNQKEPQQD 116
+ +P R+S R+ SH K A RKP+E S + +E + +++ QD
Sbjct: 164 RAEPSPSPRITRKSTRQTTITSHFAKGPAKRKPQE------ESERAKSDESIKEEDKDQD 217
Query: 117 QESEETSTISSVS 129
++ ++ V+
Sbjct: 218 EKRRRVTSRERVA 230
Score = 29.6 bits (65), Expect = 0.74
Identities = 23/114 (20%), Positives = 50/114 (43%), Gaps = 18/114 (15%)
Query: 38 QHQRGEEEEGPLSTKIQKPSEDSQDNPEGKRESLR--------------EFQEKSHSRKT 83
+ +R E+EE L ++ ++P+ + E RE+ E + +S +
Sbjct: 250 EEERDEKEEKRLRSQTKEPTPKQKLKEEPDREARAGVQADEDEDGDEKDEKKHRSQPKDL 309
Query: 84 AASRKPEEGR----GPTLSSHSDQLNEELNQKEPQQDQESEETSTISSVSLDSQ 133
AA R+PEE P +S D+ +E +++ + +E+ + ++S+
Sbjct: 310 AAKRRPEEKEPEKVNPQISDEKDEDEKEEKRRKTTPKEPTEKKMARAKTVMNSK 363
>gi|21396500 HIRA interacting protein 3 [Homo sapiens]
Length = 556
Score = 35.4 bits (80), Expect = 0.013
Identities = 38/125 (30%), Positives = 60/125 (48%), Gaps = 11/125 (8%)
Query: 6 QISRAEGKSTAKASRWPVKHKPPTQLSRDNHPQH--QRGEEEEGPLSTKIQKPSEDSQDN 63
++S A+ ++ +AS+ V+ + RD Q + EEEE K +K +
Sbjct: 123 EVSPAKEENPRRASK-AVEESSDEERQRDLPAQRGEESSEEEEKGYKGKTRKKPVVKKQA 181
Query: 64 PEGK----RESLREFQEKSHSRKTAASRKPEEGRGPTLS-SHSDQLNEE--LNQKEPQQD 116
P GK R+ RE E+S + + K EG T S S+Q +EE L QK+ Q++
Sbjct: 182 P-GKASVSRKQAREESEESEAEPVQRTAKKVEGNKGTKSLKESEQESEEEILAQKKEQRE 240
Query: 117 QESEE 121
+E EE
Sbjct: 241 EEVEE 245
>gi|221219020 NYD-SP11 protein [Homo sapiens]
Length = 2873
Score = 34.7 bits (78), Expect = 0.023
Identities = 21/104 (20%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 30 QLSRDNHPQHQRGEEEEGPLSTKIQKPSEDSQDNPEGKRESLREFQEKSHSRKTAASRKP 89
Q S + + +R EEEE ++++ E+ ++ EG+ + + + +E+ +K ++
Sbjct: 2240 QESLSSEEEEEREEEEERE-EEEVREEEEERKEEEEGEEKQVEKEEEEKKKKKKEKKKEE 2298
Query: 90 EEGRGPTLSSHSDQLNEELNQKEPQQDQESEETSTISSVSLDSQ 133
+ + + ++EE + E D+E EE S +D +
Sbjct: 2299 VQEKEEVFEEKEEIMSEE--ETESLSDEEEEEESCSLEEEVDRE 2340
>gi|239754909 PREDICTED: hypothetical protein [Homo sapiens]
Length = 245
Score = 34.7 bits (78), Expect = 0.023
Identities = 25/119 (21%), Positives = 51/119 (42%), Gaps = 1/119 (0%)
Query: 2 EENIQISRAEGKSTAKASRWPVKHKPPTQLSRDNHPQHQRGEEE-EGPLSTKIQKPSEDS 60
EE + + E K + S+ + + + R+ + +R +EE E K +K E
Sbjct: 110 EEKEKRKKKEKKERGRTSKEGKERERKEERKREERKERERKKEEREKERERKERKKRERK 169
Query: 61 QDNPEGKRESLREFQEKSHSRKTAASRKPEEGRGPTLSSHSDQLNEELNQKEPQQDQES 119
Q + + +E +E+ + RK E R ++ +E +KE Q+D+++
Sbjct: 170 QVGEKEEERKEKERKERKKRERNRKERKKERERKERRERKKERKKKEERKKERQKDRQT 228
Score = 33.9 bits (76), Expect = 0.039
Identities = 23/120 (19%), Positives = 52/120 (43%), Gaps = 3/120 (2%)
Query: 2 EENIQISRAEGKSTAKASRWPVKHKPPTQLSRDNHPQHQRGEEEEGPLSTKIQKPSEDSQ 61
E + R GK K R K + + R +++ GEE+E + ++ S+
Sbjct: 72 EREKERKRERGKKEKKGER---KKEERERKKRRREKENKEGEEKEKRKKKEKKERGRTSK 128
Query: 62 DNPEGKRESLREFQEKSHSRKTAASRKPEEGRGPTLSSHSDQLNEELNQKEPQQDQESEE 121
+ E +R+ R+ +E+ + R+ E R Q+ E+ +++ ++ +E ++
Sbjct: 129 EGKERERKEERKREERKERERKKEEREKERERKERKKRERKQVGEKEEERKEKERKERKK 188
Score = 30.8 bits (68), Expect = 0.33
Identities = 22/115 (19%), Positives = 52/115 (45%), Gaps = 9/115 (7%)
Query: 8 SRAEGKSTAKASRWPVKH-KPPTQLSRDNHPQHQRGEEEEGPLSTKIQKPSEDSQDNPEG 66
+R EGK ++ R + + + R+ + +RG++E+ K ++ E+ +
Sbjct: 47 TRKEGKKERESERKKERREREKRKREREKERKRERGKKEK-----KGERKKEERERKKRR 101
Query: 67 KRESLREFQEKSHSRKTAASRKPEEGRGPTLSSHSDQLNEELNQKEPQQDQESEE 121
+ + +E +EK +K K E GR ++ E ++ +++++ EE
Sbjct: 102 REKENKEGEEKEKRKK---KEKKERGRTSKEGKERERKEERKREERKERERKKEE 153
Score = 27.7 bits (60), Expect = 2.8
Identities = 28/124 (22%), Positives = 51/124 (41%), Gaps = 13/124 (10%)
Query: 16 AKASRWPVKHKPPTQLSRDNH---PQHQRG-----EEEEGPLSTKIQKPSEDSQDNPEGK 67
A +SR VK Q+ +H P Q G E E + T+ + E + + +
Sbjct: 4 AISSRAAVKLNTELQMVSCSHISKPCTQPGWQSEIREREREIETRKEGKKERESERKKER 63
Query: 68 RESLREFQEKSHSRKTAASRKPEEGRGPT-----LSSHSDQLNEELNQKEPQQDQESEET 122
RE + +E+ RK +K ++G ++ N+E +KE ++ +E +E
Sbjct: 64 REREKRKREREKERKRERGKKEKKGERKKEERERKKRRREKENKEGEEKEKRKKKEKKER 123
Query: 123 STIS 126
S
Sbjct: 124 GRTS 127
>gi|14195601 protein phosphatase 1, regulatory (inhibitor) subunit
12B isoform b [Homo sapiens]
Length = 998
Score = 34.7 bits (78), Expect = 0.023
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 55 KPSEDSQDNPEGKRESLREFQEKSHSRKTAASRKPEEGRGPTL--SSHSDQLNEELNQKE 112
KP E ++P R LR+ + + A SR+P RG ++ SS S +++ L+ K
Sbjct: 426 KPEEPKDESPSSWRLGLRKTGSHNMLSEVANSREPIRDRGSSIYRSSSSPRISALLDNK- 484
Query: 113 PQQDQESEETSTISSVS 129
D+E E S ISS++
Sbjct: 485 ---DKERENKSYISSLA 498
>gi|4505319 protein phosphatase 1, regulatory (inhibitor) subunit
12B isoform a [Homo sapiens]
Length = 982
Score = 34.7 bits (78), Expect = 0.023
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 55 KPSEDSQDNPEGKRESLREFQEKSHSRKTAASRKPEEGRGPTL--SSHSDQLNEELNQKE 112
KP E ++P R LR+ + + A SR+P RG ++ SS S +++ L+ K
Sbjct: 426 KPEEPKDESPSSWRLGLRKTGSHNMLSEVANSREPIRDRGSSIYRSSSSPRISALLDNK- 484
Query: 113 PQQDQESEETSTISSVS 129
D+E E S ISS++
Sbjct: 485 ---DKERENKSYISSLA 498
>gi|55741677 SET domain containing 1A [Homo sapiens]
Length = 1707
Score = 34.3 bits (77), Expect = 0.030
Identities = 29/129 (22%), Positives = 58/129 (44%), Gaps = 17/129 (13%)
Query: 10 AEGKSTAKASRWP---VKHKPPTQLSRDNHPQHQRGEEEEGPLSTKIQKPSEDSQDNPEG 66
A G A R P VK K P+++S EE+ P + P+E+ +D+PE
Sbjct: 879 AFGSGLRGALRLPSFKVKRKEPSEISE--------ASEEKRP---RPSTPAEEDEDDPEQ 927
Query: 67 KRESLREFQEKSHSRKTAASRKPEEG---RGPTLSSHSDQLNEELNQKEPQQDQESEETS 123
++E+ + + K R +G + L S ++ ++E + ++ ++D E +E
Sbjct: 928 EKEAGEPGRPGTKPPKRDEERGKTQGKHRKSFALDSEGEEASQESSSEKDEEDDEEDEED 987
Query: 124 TISSVSLDS 132
++D+
Sbjct: 988 EDREEAVDT 996
>gi|148746195 trichohyalin [Homo sapiens]
Length = 1943
Score = 34.3 bits (77), Expect = 0.030
Identities = 31/138 (22%), Positives = 56/138 (40%), Gaps = 16/138 (11%)
Query: 1 MEENIQISRAEGKSTAKASR--------WPVKHKPPTQLSR--------DNHPQHQRGEE 44
ME+ Q+ R EG+ + R ++ + QL R + PQ +R E
Sbjct: 1598 MEDEQQLRRQEGQQQLRQERDRKFREDEQLLQEREEQQLHRQERDRKFLEEEPQLRRQER 1657
Query: 45 EEGPLSTKIQKPSEDSQDNPEGKRESLREFQEKSHSRKTAASRKPEEGRGPTLSSHSDQL 104
E+ + +K E+ Q EG+ + LR + R+ + +E L
Sbjct: 1658 EQQLRHDRDRKFREEEQLLQEGEEQQLRRQERDRKFREEEQQLRRQERERKFLQEEQQLR 1717
Query: 105 NEELNQKEPQQDQESEET 122
+EL +K +++Q +ET
Sbjct: 1718 RQELERKFREEEQLRQET 1735
Score = 33.1 bits (74), Expect = 0.067
Identities = 22/96 (22%), Positives = 39/96 (40%), Gaps = 7/96 (7%)
Query: 33 RDNHPQHQRGEEEEGPLSTKI-------QKPSEDSQDNPEGKRESLREFQEKSHSRKTAA 85
++ PQ QR +EE K+ ++ E+ Q + + LR QE+ +
Sbjct: 261 QEEEPQRQRELQEEEEQLRKLERQELRRERQEEEQQQQRLRREQQLRRKQEEERREQQEE 320
Query: 86 SRKPEEGRGPTLSSHSDQLNEELNQKEPQQDQESEE 121
R+ +E R QL E ++ QQ + +E
Sbjct: 321 RREQQERREQQEERREQQLRREQEERREQQLRREQE 356
Score = 30.4 bits (67), Expect = 0.43
Identities = 18/92 (19%), Positives = 39/92 (42%)
Query: 30 QLSRDNHPQHQRGEEEEGPLSTKIQKPSEDSQDNPEGKRESLREFQEKSHSRKTAASRKP 89
QL + + +R +EE ++++ + + E +RE E +E+ R+ R+
Sbjct: 277 QLRKLERQELRRERQEEEQQQQRLRREQQLRRKQEEERREQQEERREQQERREQQEERRE 336
Query: 90 EEGRGPTLSSHSDQLNEELNQKEPQQDQESEE 121
++ R QL E ++ +Q E+
Sbjct: 337 QQLRREQEERREQQLRREQEEERREQQLRREQ 368
Score = 30.4 bits (67), Expect = 0.43
Identities = 29/120 (24%), Positives = 47/120 (39%), Gaps = 5/120 (4%)
Query: 2 EENIQISRAEGKSTAKASRWPVKHKPPTQLSRDNHPQHQRGEEEEGPLSTKIQKPSEDSQ 61
EE Q+ R E + ++ + + R+ Q E+E+ + +K E+ Q
Sbjct: 1695 EEEQQLRRQERERKFLQEEQQLRRQELERKFREEEQLRQETEQEQLRRQERYRKILEEEQ 1754
Query: 62 DNPEGKRESLREFQEKSHSRKTAASRKPEEGRGPTLSSHSDQLNEELNQKEPQQDQESEE 121
PE + + LR QE+ + + E S SD+ E E Q QE EE
Sbjct: 1755 LRPEREEQQLRR-QERDRKFREEEQLRQEREEQQLRSQESDRKFRE----EEQLRQEREE 1809
Score = 29.6 bits (65), Expect = 0.74
Identities = 21/101 (20%), Positives = 42/101 (41%), Gaps = 2/101 (1%)
Query: 21 WPVKHKPPTQLSRDNHPQHQRGEEEEGPLSTKIQKPSEDSQDNPEGKRESLREFQEKSHS 80
W + + + ++ Q + ++EE ++ E+ ++ E + + LR QE+
Sbjct: 457 WLKREEETERHEQERRKQQLKRDQEEERRERWLKLEEEERREQQERREQQLRREQEE--R 514
Query: 81 RKTAASRKPEEGRGPTLSSHSDQLNEELNQKEPQQDQESEE 121
R+ R+ EE R QL E ++ Q + EE
Sbjct: 515 REQRLKRQEEEERLQQRLRSEQQLRREQEERREQLLKREEE 555
Score = 28.5 bits (62), Expect = 1.6
Identities = 16/85 (18%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
Query: 34 DNHPQHQRGEEEEGPLSTKIQKPSEDSQDNPEGKRESLREFQEK---SHSRKTAASRKPE 90
+ Q + +EEE L +++ + ++ E + + L+ +EK R+ R+ E
Sbjct: 513 ERREQRLKRQEEEERLQQRLRSEQQLRREQEERREQLLKREEEKRLEQERREQRLKREQE 572
Query: 91 EGRGPTLSSHSDQLNEELNQKEPQQ 115
E R L ++ + L +++ ++
Sbjct: 573 ERRDQLLKREEERRQQRLKREQEER 597
Score = 28.1 bits (61), Expect = 2.2
Identities = 25/121 (20%), Positives = 49/121 (40%), Gaps = 1/121 (0%)
Query: 1 MEENIQISRAEGKSTAKASRWPVKHKPPTQLSRDNHPQHQRGEEEEGPLSTKIQKPSEDS 60
++E Q+ E + + R + QLSR + R EE++ + +K E+
Sbjct: 1393 LKEEQQLRCQEREQQLRQDRDRKFREEEQQLSRQERDRKFREEEQQVRRQERERKFLEEE 1452
Query: 61 QDNPEGKRESLREFQEKSHSRKTAASRKPEEGRGPTLSSHSDQLNEELNQKEPQQDQESE 120
Q + + RE ++ R+ + E R L +E ++K +Q+ S+
Sbjct: 1453 QQLRQERHRKFREEEQLLQEREEQQLHRQERDR-KFLEEEQQLRRQERDRKFREQELRSQ 1511
Query: 121 E 121
E
Sbjct: 1512 E 1512
Score = 27.7 bits (60), Expect = 2.8
Identities = 19/91 (20%), Positives = 40/91 (43%)
Query: 30 QLSRDNHPQHQRGEEEEGPLSTKIQKPSEDSQDNPEGKRESLREFQEKSHSRKTAASRKP 89
+L R + + +EEE L + +K ++ + E L++ +E+ + R+
Sbjct: 1075 ELERQYRKEEELQQEEEQLLREEPEKRRRQERERQCREEEELQQEEEQLLREEREKRRRQ 1134
Query: 90 EEGRGPTLSSHSDQLNEELNQKEPQQDQESE 120
E R Q E+L ++EP++ + E
Sbjct: 1135 ELERQYREEEEVQQEEEQLLREEPEKRRRQE 1165
Score = 26.6 bits (57), Expect = 6.3
Identities = 24/104 (23%), Positives = 41/104 (39%), Gaps = 1/104 (0%)
Query: 17 KASRWPVKHKPPTQLSRDNHPQHQRGEEEEGPLSTKIQKPSEDSQDNPEGKRESLREFQE 76
K R + KP Q Q + EEEE + +K Q+ + E L++ +E
Sbjct: 883 KRRRHTLYAKPALQEQLRKEQQLLQEEEEELQREER-EKRRRQEQERQYREEEQLQQEEE 941
Query: 77 KSHSRKTAASRKPEEGRGPTLSSHSDQLNEELNQKEPQQDQESE 120
+ + R+ E R Q E+L +EP++ + E
Sbjct: 942 QLLREEREKRRRQERERQYRKDKKLQQKEEQLLGEEPEKRRRQE 985
>gi|20336205 transcriptional regulator ATRX isoform 2 [Homo sapiens]
Length = 2454
Score = 34.3 bits (77), Expect = 0.030
Identities = 28/130 (21%), Positives = 59/130 (45%), Gaps = 4/130 (3%)
Query: 6 QISRAEGKSTAKASRWPVKHKPPTQLSRD--NHPQHQRGEEEEGPLSTKIQKPSEDSQDN 63
+++ ++G+S + P +HK +R + + + +E +S ++ + SED Q
Sbjct: 1306 KLTVSDGESGEEKKTKPKEHKEVKGRNRRKVSSEDSEDSDFQESGVSEEVSE-SEDEQ-R 1363
Query: 64 PEGKRESLREFQEKSHSRKTAASRKPEEGRGPTLSSHSDQLNEELNQKEPQQDQESEETS 123
P + E +E S K R+ + + + S + EE +KE ++++E EE
Sbjct: 1364 PRTRSAKKAELEENQRSYKQKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEE 1423
Query: 124 TISSVSLDSQ 133
+ DS+
Sbjct: 1424 EEEDENDDSK 1433
>gi|20336209 transcriptional regulator ATRX isoform 1 [Homo sapiens]
Length = 2492
Score = 34.3 bits (77), Expect = 0.030
Identities = 28/130 (21%), Positives = 59/130 (45%), Gaps = 4/130 (3%)
Query: 6 QISRAEGKSTAKASRWPVKHKPPTQLSRD--NHPQHQRGEEEEGPLSTKIQKPSEDSQDN 63
+++ ++G+S + P +HK +R + + + +E +S ++ + SED Q
Sbjct: 1344 KLTVSDGESGEEKKTKPKEHKEVKGRNRRKVSSEDSEDSDFQESGVSEEVSE-SEDEQ-R 1401
Query: 64 PEGKRESLREFQEKSHSRKTAASRKPEEGRGPTLSSHSDQLNEELNQKEPQQDQESEETS 123
P + E +E S K R+ + + + S + EE +KE ++++E EE
Sbjct: 1402 PRTRSAKKAELEENQRSYKQKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEE 1461
Query: 124 TISSVSLDSQ 133
+ DS+
Sbjct: 1462 EEEDENDDSK 1471
>gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Homo
sapiens]
Length = 1152
Score = 34.3 bits (77), Expect = 0.030
Identities = 20/91 (21%), Positives = 38/91 (41%), Gaps = 3/91 (3%)
Query: 30 QLSRDNHPQHQRGEEEEGPLSTKIQKPSEDSQDNPEGKRESLREFQEKSHSRKTAASRKP 89
++ +H GEEEEG + +K E + EG+ E + +EK + R
Sbjct: 726 EMEEGGEEEHGEGEEEEGDREEEEEKEGEGKE---EGEGEEVEGEREKEEGERKKEERAG 782
Query: 90 EEGRGPTLSSHSDQLNEELNQKEPQQDQESE 120
+E +G + EE + ++++ E
Sbjct: 783 KEEKGEEEGDQGEGEEEETEGRGEEKEEGGE 813
Score = 32.7 bits (73), Expect = 0.087
Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 42 GEEEEGPLSTKIQKPSEDSQDNPEGKRESLREFQEKSHSRKTAASRKPEEGRGPTLSSHS 101
GEEEEG + ++ E+ ++ EG+ E E +E+ + + EEG G
Sbjct: 981 GEEEEGEGEGEEEEGEEEGEEEGEGEEEGEGEGEEEEEG-EVEGEVEGEEGEGEGEEEEG 1039
Query: 102 DQLNEELNQ----KEPQQDQESEE 121
++ EE + +E ++++E EE
Sbjct: 1040 EEEGEEREKEGEGEENRRNREEEE 1063
Score = 30.0 bits (66), Expect = 0.57
Identities = 24/87 (27%), Positives = 33/87 (37%), Gaps = 11/87 (12%)
Query: 35 NHPQHQRGEEEEGPLSTKIQKPSEDSQDNPEGKRESLREFQEKSHSRKTAASRKPEEGRG 94
N + GEEE G + E+ + EGK E E + + K RK EE G
Sbjct: 724 NQEMEEGGEEEHGEGEEEEGDREEEEEKEGEGKEEGEGE-EVEGEREKEEGERKKEERAG 782
Query: 95 PTLSSHSDQLNEELNQKEPQQDQESEE 121
EE ++E Q + EE
Sbjct: 783 ----------KEEKGEEEGDQGEGEEE 799
Score = 30.0 bits (66), Expect = 0.57
Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 4/89 (4%)
Query: 33 RDNHPQHQRGEEEEGPLSTKIQKPSEDSQDNPEGK-RESLREFQEKSHSRKTAASRKPEE 91
R+ + GEEEEG ++ E ++ EGK E E + + + + EE
Sbjct: 826 REEEEEEGEGEEEEGEGE---EEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEGEGEEEE 882
Query: 92 GRGPTLSSHSDQLNEELNQKEPQQDQESE 120
G G + EE + E +++ E E
Sbjct: 883 GEGEGEEEGEGEGEEEEGEGEGEEEGEGE 911
Score = 28.5 bits (62), Expect = 1.6
Identities = 21/90 (23%), Positives = 40/90 (44%), Gaps = 2/90 (2%)
Query: 33 RDNHPQHQRGEEEEGPLSTKIQKPSEDSQD-NPEGKRESLREFQEKSHSRKTAASRKPEE 91
RD Q Q+ E E+G + Q+ E ++ + EG+ E +E+ + + EE
Sbjct: 705 RDGEEQEQK-EREQGHQKERNQEMEEGGEEEHGEGEEEEGDREEEEEKEGEGKEEGEGEE 763
Query: 92 GRGPTLSSHSDQLNEELNQKEPQQDQESEE 121
G ++ EE KE + ++E ++
Sbjct: 764 VEGEREKEEGERKKEERAGKEEKGEEEGDQ 793
Score = 28.1 bits (61), Expect = 2.2
Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 4/84 (4%)
Query: 42 GEEEEGPLSTKIQKPSEDSQDNPEGKRESLREFQEKSHSRKTAASRKPEEGRGPTLSSHS 101
GEEEEG + + E ++ EG+ E E + + + + EEG G
Sbjct: 878 GEEEEGEGEGEEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEEEG 937
Query: 102 DQLNE----ELNQKEPQQDQESEE 121
+ E E ++E + + E EE
Sbjct: 938 EGEGEDGEGEGEEEEGEWEGEEEE 961
Score = 27.7 bits (60), Expect = 2.8
Identities = 19/84 (22%), Positives = 35/84 (41%), Gaps = 1/84 (1%)
Query: 38 QHQRGEEEEGPLSTKIQKPSEDSQDNPEGKRESLREFQEKSHSRKTAASRKPEEGRGPTL 97
+ + GE ++ + K +K E+ D EG+ E E+ + EEG+G
Sbjct: 769 EKEEGERKKEERAGKEEKGEEEG-DQGEGEEEETEGRGEEKEEGGEVEGGEVEEGKGERE 827
Query: 98 SSHSDQLNEELNQKEPQQDQESEE 121
+ EE + +++ E EE
Sbjct: 828 EEEEEGEGEEEEGEGEEEEGEGEE 851
Score = 27.3 bits (59), Expect = 3.7
Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 3/89 (3%)
Query: 34 DNHPQHQRGEEEEGPLSTKIQ-KPSEDSQDNPEGKRESLREFQEKSHSRKTAASRKPEEG 92
+ + GEEEEG + + + E ++ EG+ E E E + + EEG
Sbjct: 841 EGEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEGEGEEEEGEGEGEEEGEGEGEEEEG 900
Query: 93 RGPTLSSHSDQLNEELNQKEPQQDQESEE 121
G + EE + E + ++E EE
Sbjct: 901 EGEGEEEGEGEGEEE--EGEGKGEEEGEE 927
Score = 27.3 bits (59), Expect = 3.7
Identities = 20/82 (24%), Positives = 32/82 (39%), Gaps = 2/82 (2%)
Query: 42 GEEEEGPLSTKIQKPSEDSQDNPEGKRE--SLREFQEKSHSRKTAASRKPEEGRGPTLSS 99
GEEEEG + + E + EG+ E +E+ EEG G
Sbjct: 957 GEEEEGEGEGEEEGEGEGEEGEGEGEEEEGEGEGEEEEGEEEGEEEGEGEEEGEGEGEEE 1016
Query: 100 HSDQLNEELNQKEPQQDQESEE 121
++ E+ +E + + E EE
Sbjct: 1017 EEGEVEGEVEGEEGEGEGEEEE 1038
>gi|223718207 ets variant gene 3 isoform 1 [Homo sapiens]
Length = 512
Score = 34.3 bits (77), Expect = 0.030
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Query: 17 KASRWPVKHKPPTQLSRDNHPQHQRGEEEEGPLSTKIQ-------KPSEDSQDNPEGKRE 69
+++++ +K +PP + R N + EE P++T K S+ +PE R+
Sbjct: 338 ESTQFSIKLQPPP-VGRKNR-ERVESSEESAPVTTPTMASIPPRIKVEPASEKDPESLRQ 395
Query: 70 SLREFQEKSHSRKTAASRKPEEGRG 94
S RE +E + T SR EE +G
Sbjct: 396 SAREKEEHTQEEGTVPSRTIEEEKG 420
>gi|157168329 formin 1 [Homo sapiens]
Length = 1196
Score = 33.9 bits (76), Expect = 0.039
Identities = 32/126 (25%), Positives = 52/126 (41%), Gaps = 8/126 (6%)
Query: 2 EENIQISRAEG-KSTAKASRWPVKHKPPTQLSRDNHPQHQRGEEEEGPLSTK--IQKPSE 58
+E + +S +G K R + H S D + + G GP S + +PS+
Sbjct: 119 QELLPLSTLKGTKDDVICVRGTLVHTTSDSDSDDGGQEPEEGSSTNGPKSPSGVLSEPSQ 178
Query: 59 DSQDNPEGKRESLREFQEKSHSRKTAASRKPEEGRGPTLSSHSDQLNEEL-NQKEPQQDQ 117
+S++NP G RE+ + + P +SS + N L ++ P QDQ
Sbjct: 179 ESKENPGGFREN----TVTGEMNGAELCAEDPQRIPPEMSSKLEAGNGGLQTERRPSQDQ 234
Query: 118 ESEETS 123
EE S
Sbjct: 235 VGEEGS 240
>gi|4758172 dentin matrix acidic phosphoprotein 1 isoform 1
precursor [Homo sapiens]
Length = 513
Score = 33.9 bits (76), Expect = 0.039
Identities = 22/99 (22%), Positives = 46/99 (46%), Gaps = 2/99 (2%)
Query: 35 NHPQHQRGEEEEGPLSTKIQKPSEDSQDNPEGKRESLREFQEKSHSRKTAASRKPEEGRG 94
+H + + EE+ S++ SE+S ++PE + S +E + S + S +
Sbjct: 393 SHSKSESREEQADSESSESLNFSEESPESPEDENSSSQEGLQSHSSSAESQSEESHSEED 452
Query: 95 PTLSSHSDQLNEELNQKEPQQDQESEETSTISSVSLDSQ 133
+ S S + E+ N E + SEE + ++ ++S+
Sbjct: 453 DSDSQDSSRSKEDSNSTESK--SSSEEDGQLKNIEIESR 489
Score = 30.4 bits (67), Expect = 0.43
Identities = 25/102 (24%), Positives = 44/102 (43%), Gaps = 2/102 (1%)
Query: 32 SRDNHPQHQRGEEEEGPLSTKIQKPSEDSQDNP-EGKRESLREFQEKSHSRKTAASRKPE 90
S++N Q + + +GP S Q+ + SQ+N E + E + E + + T+ E
Sbjct: 321 SKENLSQEE-SQNVDGPSSESSQEANLSSQENSSESQEEVVSESRGDNPDPTTSYVEDQE 379
Query: 91 EGRGPTLSSHSDQLNEELNQKEPQQDQESEETSTISSVSLDS 132
+ S + + +E Q D ES E+ S S +S
Sbjct: 380 DSDSSEEDSSHTLSHSKSESREEQADSESSESLNFSEESPES 421
Score = 26.6 bits (57), Expect = 6.3
Identities = 18/90 (20%), Positives = 32/90 (35%)
Query: 38 QHQRGEEEEGPLSTKIQKPSEDSQDNPEGKRESLREFQEKSHSRKTAASRKPEEGRGPTL 97
Q EE T SE ++ + + F E+S + +EG
Sbjct: 378 QEDSDSSEEDSSHTLSHSKSESREEQADSESSESLNFSEESPESPEDENSSSQEGLQSHS 437
Query: 98 SSHSDQLNEELNQKEPQQDQESEETSTISS 127
SS Q E ++++ Q+S + S+
Sbjct: 438 SSAESQSEESHSEEDDSDSQDSSRSKEDSN 467
>gi|121256621 dentin matrix acidic phosphoprotein 1 isoform 2
precursor [Homo sapiens]
Length = 497
Score = 33.9 bits (76), Expect = 0.039
Identities = 22/99 (22%), Positives = 46/99 (46%), Gaps = 2/99 (2%)
Query: 35 NHPQHQRGEEEEGPLSTKIQKPSEDSQDNPEGKRESLREFQEKSHSRKTAASRKPEEGRG 94
+H + + EE+ S++ SE+S ++PE + S +E + S + S +
Sbjct: 377 SHSKSESREEQADSESSESLNFSEESPESPEDENSSSQEGLQSHSSSAESQSEESHSEED 436
Query: 95 PTLSSHSDQLNEELNQKEPQQDQESEETSTISSVSLDSQ 133
+ S S + E+ N E + SEE + ++ ++S+
Sbjct: 437 DSDSQDSSRSKEDSNSTESK--SSSEEDGQLKNIEIESR 473
Score = 30.4 bits (67), Expect = 0.43
Identities = 25/102 (24%), Positives = 44/102 (43%), Gaps = 2/102 (1%)
Query: 32 SRDNHPQHQRGEEEEGPLSTKIQKPSEDSQDNP-EGKRESLREFQEKSHSRKTAASRKPE 90
S++N Q + + +GP S Q+ + SQ+N E + E + E + + T+ E
Sbjct: 305 SKENLSQEE-SQNVDGPSSESSQEANLSSQENSSESQEEVVSESRGDNPDPTTSYVEDQE 363
Query: 91 EGRGPTLSSHSDQLNEELNQKEPQQDQESEETSTISSVSLDS 132
+ S + + +E Q D ES E+ S S +S
Sbjct: 364 DSDSSEEDSSHTLSHSKSESREEQADSESSESLNFSEESPES 405
Score = 26.6 bits (57), Expect = 6.3
Identities = 18/90 (20%), Positives = 32/90 (35%)
Query: 38 QHQRGEEEEGPLSTKIQKPSEDSQDNPEGKRESLREFQEKSHSRKTAASRKPEEGRGPTL 97
Q EE T SE ++ + + F E+S + +EG
Sbjct: 362 QEDSDSSEEDSSHTLSHSKSESREEQADSESSESLNFSEESPESPEDENSSSQEGLQSHS 421
Query: 98 SSHSDQLNEELNQKEPQQDQESEETSTISS 127
SS Q E ++++ Q+S + S+
Sbjct: 422 SSAESQSEESHSEEDDSDSQDSSRSKEDSN 451
>gi|195976805 hypoxia up-regulated 1 precursor [Homo sapiens]
Length = 999
Score = 33.9 bits (76), Expect = 0.039
Identities = 20/74 (27%), Positives = 36/74 (48%)
Query: 9 RAEGKSTAKASRWPVKHKPPTQLSRDNHPQHQRGEEEEGPLSTKIQKPSEDSQDNPEGKR 68
+ E K A+A PP + D P+ ++ E+E ++ QKPSE ++ PEG
Sbjct: 619 QVELKEEAEAPVEDGSQPPPPEPKGDATPEGEKATEKENGDKSEAQKPSEKAEAGPEGVA 678
Query: 69 ESLREFQEKSHSRK 82
+ +++ +RK
Sbjct: 679 PAPEGEKKQKPARK 692
Score = 27.7 bits (60), Expect = 2.8
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 24 KHKPPTQLSRDNH-PQHQRGEEEEGPLSTKIQKPSEDSQDN--PEGKRESLREFQEKSHS 80
+ + P + S+D Q + EE E P+ Q P + + + PEG++ + +E +KS +
Sbjct: 604 EEESPAEGSKDEPGEQVELKEEAEAPVEDGSQPPPPEPKGDATPEGEKATEKENGDKSEA 663
Query: 81 RKTAASRKPEEG 92
+K S K E G
Sbjct: 664 QK--PSEKAEAG 673
>gi|5453832 hypoxia up-regulated 1 precursor [Homo sapiens]
Length = 999
Score = 33.9 bits (76), Expect = 0.039
Identities = 20/74 (27%), Positives = 36/74 (48%)
Query: 9 RAEGKSTAKASRWPVKHKPPTQLSRDNHPQHQRGEEEEGPLSTKIQKPSEDSQDNPEGKR 68
+ E K A+A PP + D P+ ++ E+E ++ QKPSE ++ PEG
Sbjct: 619 QVELKEEAEAPVEDGSQPPPPEPKGDATPEGEKATEKENGDKSEAQKPSEKAEAGPEGVA 678
Query: 69 ESLREFQEKSHSRK 82
+ +++ +RK
Sbjct: 679 PAPEGEKKQKPARK 692
Score = 27.7 bits (60), Expect = 2.8
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 24 KHKPPTQLSRDNH-PQHQRGEEEEGPLSTKIQKPSEDSQDN--PEGKRESLREFQEKSHS 80
+ + P + S+D Q + EE E P+ Q P + + + PEG++ + +E +KS +
Sbjct: 604 EEESPAEGSKDEPGEQVELKEEAEAPVEDGSQPPPPEPKGDATPEGEKATEKENGDKSEA 663
Query: 81 RKTAASRKPEEG 92
+K S K E G
Sbjct: 664 QK--PSEKAEAG 673
>gi|156104891 general transcription factor IIF, polypeptide 1, 74kDa
[Homo sapiens]
Length = 517
Score = 33.9 bits (76), Expect = 0.039
Identities = 28/125 (22%), Positives = 54/125 (43%), Gaps = 13/125 (10%)
Query: 1 MEENIQISR-AEGKSTAKASRWPVKHKPPTQLSRDNHPQHQRGEEEEGPLSTKIQKPSED 59
+E+++++S A S + R P K + ++G ++E ED
Sbjct: 210 LEDDLEMSSDASDASGEEGGRVPKAKKKAPLAKGGRKKKKKKGSDDEA---------FED 260
Query: 60 SQDNP-EGKR-ESLREFQEKSHSRKTAASRKPEEGRGPT-LSSHSDQLNEELNQKEPQQD 116
S D EG+ + + + S + ++ P++ GP + SD E +K P++D
Sbjct: 261 SDDGDFEGQEVDYMSDGSSSSQEEPESKAKAPQQEEGPKGVDEQSDSSEESEEEKPPEED 320
Query: 117 QESEE 121
+E EE
Sbjct: 321 KEEEE 325
>gi|32967605 bromodomain adjacent to zinc finger domain, 1A isoform b
[Homo sapiens]
Length = 1524
Score = 33.9 bits (76), Expect = 0.039
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
Query: 42 GEEEEGPLSTKIQKPSEDSQDNPEGKRESLREFQEKSHSRKTAASRKPEEGRGPTLSSHS 101
G+EEEG + + +D D+ E + SL + R R P + RG SS S
Sbjct: 1199 GDEEEGQSEEEEYEVEQDEDDSQEEEEVSLPK-------RGRPQVRLPVKTRGKLSSSFS 1251
Query: 102 DQLNEELNQKEPQQDQESEETSTISS 127
+ ++ + P + Q+S +T+SS
Sbjct: 1252 SRGQQQEPGRYPSRSQQSTPKTTVSS 1277
>gi|32967603 bromodomain adjacent to zinc finger domain, 1A isoform a
[Homo sapiens]
Length = 1556
Score = 33.9 bits (76), Expect = 0.039
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
Query: 42 GEEEEGPLSTKIQKPSEDSQDNPEGKRESLREFQEKSHSRKTAASRKPEEGRGPTLSSHS 101
G+EEEG + + +D D+ E + SL + R R P + RG SS S
Sbjct: 1231 GDEEEGQSEEEEYEVEQDEDDSQEEEEVSLPK-------RGRPQVRLPVKTRGKLSSSFS 1283
Query: 102 DQLNEELNQKEPQQDQESEETSTISS 127
+ ++ + P + Q+S +T+SS
Sbjct: 1284 SRGQQQEPGRYPSRSQQSTPKTTVSS 1309
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.297 0.116 0.309
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,814,354
Number of Sequences: 37866
Number of extensions: 279987
Number of successful extensions: 1953
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 187
Number of HSP's successfully gapped in prelim test: 291
Number of HSP's that attempted gapping in prelim test: 1382
Number of HSP's gapped (non-prelim): 796
length of query: 133
length of database: 18,247,518
effective HSP length: 91
effective length of query: 42
effective length of database: 14,801,712
effective search space: 621671904
effective search space used: 621671904
T: 11
A: 40
X1: 17 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 44 (21.9 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.