Search of human proteins with 169216354

Search of human proteins with 169216354

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169216354 PREDICTED: similar to armadillo repeat containing,
X-linked 6, partial [Homo sapiens]
         (189 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169217162 PREDICTED: similar to armadillo repeat containing, ...   377   e-105
gi|169216354 PREDICTED: similar to armadillo repeat containing, ...   377   e-105
gi|169216627 PREDICTED: similar to armadillo repeat containing, ...   377   e-105
gi|34147335 armadillo repeat containing, X-linked 6 [Homo sapiens]    345   2e-95
gi|57546906 armadillo repeat containing, X-linked 6 [Homo sapiens]    345   2e-95
gi|29540566 armadillo repeat containing, X-linked 3 [Homo sapiens]    106   1e-23
gi|29540564 armadillo repeat containing, X-linked 3 [Homo sapiens]    106   1e-23
gi|7705274 armadillo repeat containing, X-linked 3 [Homo sapiens]     106   1e-23
gi|238776793 SVH protein isoform b [Homo sapiens]                      88   4e-18
gi|31377663 SVH protein isoform a [Homo sapiens]                       88   4e-18
gi|7706143 armadillo repeat containing, X-linked 1 [Homo sapiens]      84   6e-17
gi|7662162 ALEX2 protein [Homo sapiens]                                82   2e-16
gi|29540562 ALEX2 protein [Homo sapiens]                               82   2e-16
gi|239757861 PREDICTED: similar to armadillo repeat containing, ...    68   4e-12
gi|238776797 SVH protein isoform e [Homo sapiens]                      62   4e-10
gi|169165522 PREDICTED: similar to SVH protein isoform 1 [Homo s...    62   4e-10
gi|169165931 PREDICTED: similar to SVH protein isoform 1 [Homo s...    60   9e-10
gi|113414573 PREDICTED: similar to SVH protein isoform 2 [Homo s...    60   9e-10
gi|216547715 basic helix-loop-helix domain containing, class B, ...    60   9e-10
gi|216547682 basic helix-loop-helix domain containing, class B, ...    60   9e-10
gi|216547672 basic helix-loop-helix domain containing, class B, ...    60   9e-10
gi|216547663 basic helix-loop-helix domain containing, class B, ...    60   9e-10
gi|216547655 basic helix-loop-helix domain containing, class B, ...    60   9e-10
gi|216547646 basic helix-loop-helix domain containing, class B, ...    60   9e-10
gi|216547639 basic helix-loop-helix domain containing, class B, ...    60   9e-10
gi|39930463 basic helix-loop-helix domain containing, class B, 9...    60   9e-10
gi|41054846 armadillo repeat containing, X-linked 5 [Homo sapiens]     55   4e-08
gi|51702248 G protein-coupled receptor associated sorting protei...    49   3e-06
gi|19923967 G protein-coupled receptor associated sorting protei...    49   3e-06
gi|150378528 G protein-coupled receptor associated sorting prote...    44   6e-05

>gi|169217162 PREDICTED: similar to armadillo repeat containing,
           X-linked 6 [Homo sapiens]
          Length = 200

 Score =  377 bits (967), Expect = e-105
 Identities = 189/189 (100%), Positives = 189/189 (100%)

Query: 1   MTYSPNENKKISGYAQNFKNGSCVLDLSKCLFIQGKLLFAEPKDAGFPFSQDINSHLASL 60
           MTYSPNENKKISGYAQNFKNGSCVLDLSKCLFIQGKLLFAEPKDAGFPFSQDINSHLASL
Sbjct: 1   MTYSPNENKKISGYAQNFKNGSCVLDLSKCLFIQGKLLFAEPKDAGFPFSQDINSHLASL 60

Query: 61  SMARNTSPTPDPTVREALCAPDNLNASIESQGQIKMYINEVCRETVSRCCNSFLQQAGLN 120
           SMARNTSPTPDPTVREALCAPDNLNASIESQGQIKMYINEVCRETVSRCCNSFLQQAGLN
Sbjct: 61  SMARNTSPTPDPTVREALCAPDNLNASIESQGQIKMYINEVCRETVSRCCNSFLQQAGLN 120

Query: 121 LLISMTVINNMLAKSASDLKFPLISEGSGCAKVQVLKPLMGLSEKPVLAGELVGAQMLFS 180
           LLISMTVINNMLAKSASDLKFPLISEGSGCAKVQVLKPLMGLSEKPVLAGELVGAQMLFS
Sbjct: 121 LLISMTVINNMLAKSASDLKFPLISEGSGCAKVQVLKPLMGLSEKPVLAGELVGAQMLFS 180

Query: 181 FMSLFIRNG 189
           FMSLFIRNG
Sbjct: 181 FMSLFIRNG 189


>gi|169216354 PREDICTED: similar to armadillo repeat containing,
           X-linked 6, partial [Homo sapiens]
          Length = 189

 Score =  377 bits (967), Expect = e-105
 Identities = 189/189 (100%), Positives = 189/189 (100%)

Query: 1   MTYSPNENKKISGYAQNFKNGSCVLDLSKCLFIQGKLLFAEPKDAGFPFSQDINSHLASL 60
           MTYSPNENKKISGYAQNFKNGSCVLDLSKCLFIQGKLLFAEPKDAGFPFSQDINSHLASL
Sbjct: 1   MTYSPNENKKISGYAQNFKNGSCVLDLSKCLFIQGKLLFAEPKDAGFPFSQDINSHLASL 60

Query: 61  SMARNTSPTPDPTVREALCAPDNLNASIESQGQIKMYINEVCRETVSRCCNSFLQQAGLN 120
           SMARNTSPTPDPTVREALCAPDNLNASIESQGQIKMYINEVCRETVSRCCNSFLQQAGLN
Sbjct: 61  SMARNTSPTPDPTVREALCAPDNLNASIESQGQIKMYINEVCRETVSRCCNSFLQQAGLN 120

Query: 121 LLISMTVINNMLAKSASDLKFPLISEGSGCAKVQVLKPLMGLSEKPVLAGELVGAQMLFS 180
           LLISMTVINNMLAKSASDLKFPLISEGSGCAKVQVLKPLMGLSEKPVLAGELVGAQMLFS
Sbjct: 121 LLISMTVINNMLAKSASDLKFPLISEGSGCAKVQVLKPLMGLSEKPVLAGELVGAQMLFS 180

Query: 181 FMSLFIRNG 189
           FMSLFIRNG
Sbjct: 181 FMSLFIRNG 189


>gi|169216627 PREDICTED: similar to armadillo repeat containing,
           X-linked 6 [Homo sapiens]
          Length = 200

 Score =  377 bits (967), Expect = e-105
 Identities = 189/189 (100%), Positives = 189/189 (100%)

Query: 1   MTYSPNENKKISGYAQNFKNGSCVLDLSKCLFIQGKLLFAEPKDAGFPFSQDINSHLASL 60
           MTYSPNENKKISGYAQNFKNGSCVLDLSKCLFIQGKLLFAEPKDAGFPFSQDINSHLASL
Sbjct: 1   MTYSPNENKKISGYAQNFKNGSCVLDLSKCLFIQGKLLFAEPKDAGFPFSQDINSHLASL 60

Query: 61  SMARNTSPTPDPTVREALCAPDNLNASIESQGQIKMYINEVCRETVSRCCNSFLQQAGLN 120
           SMARNTSPTPDPTVREALCAPDNLNASIESQGQIKMYINEVCRETVSRCCNSFLQQAGLN
Sbjct: 61  SMARNTSPTPDPTVREALCAPDNLNASIESQGQIKMYINEVCRETVSRCCNSFLQQAGLN 120

Query: 121 LLISMTVINNMLAKSASDLKFPLISEGSGCAKVQVLKPLMGLSEKPVLAGELVGAQMLFS 180
           LLISMTVINNMLAKSASDLKFPLISEGSGCAKVQVLKPLMGLSEKPVLAGELVGAQMLFS
Sbjct: 121 LLISMTVINNMLAKSASDLKFPLISEGSGCAKVQVLKPLMGLSEKPVLAGELVGAQMLFS 180

Query: 181 FMSLFIRNG 189
           FMSLFIRNG
Sbjct: 181 FMSLFIRNG 189


>gi|34147335 armadillo repeat containing, X-linked 6 [Homo sapiens]
          Length = 300

 Score =  345 bits (884), Expect = 2e-95
 Identities = 177/185 (95%), Positives = 179/185 (96%), Gaps = 1/185 (0%)

Query: 5   PNENKKISGYAQNFKNGSCVLDLSKCLFIQGKLLFAEPKDAGFPFSQDINSHLASLSMAR 64
           P E+K  +  AQN KNGSCVLDLSKCLFIQGKLLFAEPKDAGFPFSQDINSHLASLSMAR
Sbjct: 106 PYEHKN-TWSAQNCKNGSCVLDLSKCLFIQGKLLFAEPKDAGFPFSQDINSHLASLSMAR 164

Query: 65  NTSPTPDPTVREALCAPDNLNASIESQGQIKMYINEVCRETVSRCCNSFLQQAGLNLLIS 124
           NTSPTPDPTVREALCAPDNLNASIESQGQIKMYINEVCRETVSRCCNSFLQQAGLNLLIS
Sbjct: 165 NTSPTPDPTVREALCAPDNLNASIESQGQIKMYINEVCRETVSRCCNSFLQQAGLNLLIS 224

Query: 125 MTVINNMLAKSASDLKFPLISEGSGCAKVQVLKPLMGLSEKPVLAGELVGAQMLFSFMSL 184
           MTVINNMLAKSASDLKFPLISEGSGCAKVQVLKPLMGLSEKPVLAGELVGAQMLFSFMSL
Sbjct: 225 MTVINNMLAKSASDLKFPLISEGSGCAKVQVLKPLMGLSEKPVLAGELVGAQMLFSFMSL 284

Query: 185 FIRNG 189
           FIRNG
Sbjct: 285 FIRNG 289


>gi|57546906 armadillo repeat containing, X-linked 6 [Homo sapiens]
          Length = 300

 Score =  345 bits (884), Expect = 2e-95
 Identities = 177/185 (95%), Positives = 179/185 (96%), Gaps = 1/185 (0%)

Query: 5   PNENKKISGYAQNFKNGSCVLDLSKCLFIQGKLLFAEPKDAGFPFSQDINSHLASLSMAR 64
           P E+K  +  AQN KNGSCVLDLSKCLFIQGKLLFAEPKDAGFPFSQDINSHLASLSMAR
Sbjct: 106 PYEHKN-TWSAQNCKNGSCVLDLSKCLFIQGKLLFAEPKDAGFPFSQDINSHLASLSMAR 164

Query: 65  NTSPTPDPTVREALCAPDNLNASIESQGQIKMYINEVCRETVSRCCNSFLQQAGLNLLIS 124
           NTSPTPDPTVREALCAPDNLNASIESQGQIKMYINEVCRETVSRCCNSFLQQAGLNLLIS
Sbjct: 165 NTSPTPDPTVREALCAPDNLNASIESQGQIKMYINEVCRETVSRCCNSFLQQAGLNLLIS 224

Query: 125 MTVINNMLAKSASDLKFPLISEGSGCAKVQVLKPLMGLSEKPVLAGELVGAQMLFSFMSL 184
           MTVINNMLAKSASDLKFPLISEGSGCAKVQVLKPLMGLSEKPVLAGELVGAQMLFSFMSL
Sbjct: 225 MTVINNMLAKSASDLKFPLISEGSGCAKVQVLKPLMGLSEKPVLAGELVGAQMLFSFMSL 284

Query: 185 FIRNG 189
           FIRNG
Sbjct: 285 FIRNG 289


>gi|29540566 armadillo repeat containing, X-linked 3 [Homo sapiens]
          Length = 379

 Score =  106 bits (264), Expect = 1e-23
 Identities = 71/186 (38%), Positives = 108/186 (58%), Gaps = 6/186 (3%)

Query: 4   SPNENKKISGYAQNFKNGSCVLDLSKCLFIQGKLLFAEPKDAGFPFSQDINSHLASLSMA 63
           SPN +  +    Q  +   C++++S+  +I    L A   +A + F++DI   L  L + 
Sbjct: 110 SPNSDDTVLS-PQELQKVLCLVEMSEKPYILEAALIALGNNAAYAFNRDIIRDLGGLPIV 168

Query: 64  RNTSPTPDPTVRE-ALCAPDNLNASIESQGQIKMYINEVCRETVSRCCNSFLQQAGLNLL 122
                T DP V+E AL   +NL+ + E+Q ++K+Y+N+VC +T++   NS +Q AGL LL
Sbjct: 169 AKILNTRDPIVKEKALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRLNSSVQLAGLRLL 228

Query: 123 ISMTVIN---NMLAKSASDLKFPLISEGSGCAKVQVLKPLMGLSEKPVLAGELVGAQMLF 179
            +MTV N   +MLA S SD  F L S G+   K+QVLK L+ L+E P +  EL+ AQ+  
Sbjct: 229 TNMTVTNEYQHMLANSISDF-FRLFSAGNEETKLQVLKLLLNLAENPAMTRELLRAQVPS 287

Query: 180 SFMSLF 185
           S  SLF
Sbjct: 288 SLGSLF 293


>gi|29540564 armadillo repeat containing, X-linked 3 [Homo sapiens]
          Length = 379

 Score =  106 bits (264), Expect = 1e-23
 Identities = 71/186 (38%), Positives = 108/186 (58%), Gaps = 6/186 (3%)

Query: 4   SPNENKKISGYAQNFKNGSCVLDLSKCLFIQGKLLFAEPKDAGFPFSQDINSHLASLSMA 63
           SPN +  +    Q  +   C++++S+  +I    L A   +A + F++DI   L  L + 
Sbjct: 110 SPNSDDTVLS-PQELQKVLCLVEMSEKPYILEAALIALGNNAAYAFNRDIIRDLGGLPIV 168

Query: 64  RNTSPTPDPTVRE-ALCAPDNLNASIESQGQIKMYINEVCRETVSRCCNSFLQQAGLNLL 122
                T DP V+E AL   +NL+ + E+Q ++K+Y+N+VC +T++   NS +Q AGL LL
Sbjct: 169 AKILNTRDPIVKEKALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRLNSSVQLAGLRLL 228

Query: 123 ISMTVIN---NMLAKSASDLKFPLISEGSGCAKVQVLKPLMGLSEKPVLAGELVGAQMLF 179
            +MTV N   +MLA S SD  F L S G+   K+QVLK L+ L+E P +  EL+ AQ+  
Sbjct: 229 TNMTVTNEYQHMLANSISDF-FRLFSAGNEETKLQVLKLLLNLAENPAMTRELLRAQVPS 287

Query: 180 SFMSLF 185
           S  SLF
Sbjct: 288 SLGSLF 293


>gi|7705274 armadillo repeat containing, X-linked 3 [Homo sapiens]
          Length = 379

 Score =  106 bits (264), Expect = 1e-23
 Identities = 71/186 (38%), Positives = 108/186 (58%), Gaps = 6/186 (3%)

Query: 4   SPNENKKISGYAQNFKNGSCVLDLSKCLFIQGKLLFAEPKDAGFPFSQDINSHLASLSMA 63
           SPN +  +    Q  +   C++++S+  +I    L A   +A + F++DI   L  L + 
Sbjct: 110 SPNSDDTVLS-PQELQKVLCLVEMSEKPYILEAALIALGNNAAYAFNRDIIRDLGGLPIV 168

Query: 64  RNTSPTPDPTVRE-ALCAPDNLNASIESQGQIKMYINEVCRETVSRCCNSFLQQAGLNLL 122
                T DP V+E AL   +NL+ + E+Q ++K+Y+N+VC +T++   NS +Q AGL LL
Sbjct: 169 AKILNTRDPIVKEKALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRLNSSVQLAGLRLL 228

Query: 123 ISMTVIN---NMLAKSASDLKFPLISEGSGCAKVQVLKPLMGLSEKPVLAGELVGAQMLF 179
            +MTV N   +MLA S SD  F L S G+   K+QVLK L+ L+E P +  EL+ AQ+  
Sbjct: 229 TNMTVTNEYQHMLANSISDF-FRLFSAGNEETKLQVLKLLLNLAENPAMTRELLRAQVPS 287

Query: 180 SFMSLF 185
           S  SLF
Sbjct: 288 SLGSLF 293


>gi|238776793 SVH protein isoform b [Homo sapiens]
          Length = 308

 Score = 88.2 bits (217), Expect = 4e-18
 Identities = 58/146 (39%), Positives = 89/146 (60%), Gaps = 5/146 (3%)

Query: 44  DAGFPFSQDINSHLASLSMARNTSPTPDPTVRE-ALCAPDNLNASIESQGQIKMYINEVC 102
           +A F  +Q I   L  + +  N     + +++E AL A +NL+ ++E+Q +IK+YI++VC
Sbjct: 89  NAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKIYISQVC 148

Query: 103 RETVSRCCNSFLQQAGLNLLISMTVIN---NMLAKSASDLKFPLISEGSGCAKVQVLKPL 159
            +  S   NS +Q AGL LL +MTV N   +ML    +DL F ++  G+G  KVQVLK L
Sbjct: 149 EDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHMLHSYITDL-FQVLLTGNGNTKVQVLKLL 207

Query: 160 MGLSEKPVLAGELVGAQMLFSFMSLF 185
           + LSE P +   L+ AQ+  SF+SL+
Sbjct: 208 LNLSENPAMTEGLLRAQVDSSFLSLY 233


>gi|31377663 SVH protein isoform a [Homo sapiens]
          Length = 343

 Score = 88.2 bits (217), Expect = 4e-18
 Identities = 58/146 (39%), Positives = 89/146 (60%), Gaps = 5/146 (3%)

Query: 44  DAGFPFSQDINSHLASLSMARNTSPTPDPTVRE-ALCAPDNLNASIESQGQIKMYINEVC 102
           +A F  +Q I   L  + +  N     + +++E AL A +NL+ ++E+Q +IK+YI++VC
Sbjct: 124 NAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKIYISQVC 183

Query: 103 RETVSRCCNSFLQQAGLNLLISMTVIN---NMLAKSASDLKFPLISEGSGCAKVQVLKPL 159
            +  S   NS +Q AGL LL +MTV N   +ML    +DL F ++  G+G  KVQVLK L
Sbjct: 184 EDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHMLHSYITDL-FQVLLTGNGNTKVQVLKLL 242

Query: 160 MGLSEKPVLAGELVGAQMLFSFMSLF 185
           + LSE P +   L+ AQ+  SF+SL+
Sbjct: 243 LNLSENPAMTEGLLRAQVDSSFLSLY 268


>gi|7706143 armadillo repeat containing, X-linked 1 [Homo sapiens]
          Length = 453

 Score = 84.3 bits (207), Expect = 6e-17
 Identities = 55/166 (33%), Positives = 92/166 (55%), Gaps = 5/166 (3%)

Query: 24  VLDLSKCLFIQGKLLFAEPKDAGFPFSQDINSHLASLSMARNTSPTPDPTVREALC-APD 82
           +L+ +   FIQ   L     +A + F+Q+    L  + +      T DP +RE    A +
Sbjct: 213 ILERTNDPFIQEVALVTLGNNAAYSFNQNAIRELGGVPIIAKLIKTKDPIIREKTYNALN 272

Query: 83  NLNASIESQGQIKMYINEVCRETVSRCCNSFLQQAGLNLLISMTVIN---NMLAKSASDL 139
           NL+ + E+QG+IK YI++VC +T+    +S +Q AGL LL +MTV N   ++L+ S  D 
Sbjct: 273 NLSVNAENQGKIKTYISQVCDDTMVCRLDSAVQMAGLRLLTNMTVTNHYQHLLSYSFPDF 332

Query: 140 KFPLISEGSGCAKVQVLKPLMGLSEKPVLAGELVGAQMLFSFMSLF 185
            F L+  G+   K+Q++K ++  +E P +  ELV  ++    +SLF
Sbjct: 333 -FALLFLGNHFTKIQIMKLIINFTENPAMTRELVSCKVPSELISLF 377


>gi|7662162 ALEX2 protein [Homo sapiens]
          Length = 632

 Score = 82.4 bits (202), Expect = 2e-16
 Identities = 58/185 (31%), Positives = 100/185 (54%), Gaps = 6/185 (3%)

Query: 5   PNENKKISGYAQNFKNGSCVLDLSKCLFIQGKLLFAEPKDAGFPFSQDINSHLASLSMAR 64
           P E  +I G  ++ +    +L  S   FIQ   L     +A +  +Q+    L  L +  
Sbjct: 376 PYEIDEILG-VRDLRKVLALLQKSDDPFIQQVALLTLSNNANYSCNQETIRKLGGLPIIA 434

Query: 65  NTSPTPDPTVRE-ALCAPDNLNASIESQGQIKMYINEVCRETVSRCCNSFLQQAGLNLLI 123
           N     DP ++E AL A +NL+ + E+QG++++Y+N+V  + ++   NS +Q  GL  L 
Sbjct: 435 NMINKTDPHIKEKALMAMNNLSENYENQGRLQVYMNKVMDDIMASNLNSAVQVVGLKFLT 494

Query: 124 SMTVIN---NMLAKSASDLKFPLISEGSGCAKVQVLKPLMGLSEKPVLAGELVGAQMLFS 180
           +MT+ N   ++L  S ++  F L+S+G G  KV++LK L   +E P +  +L+  Q+  S
Sbjct: 495 NMTITNDYQHLLVNSIANF-FRLLSQGGGKIKVEILKILSNFAENPDMLKKLLSTQVPAS 553

Query: 181 FMSLF 185
           F SL+
Sbjct: 554 FSSLY 558


>gi|29540562 ALEX2 protein [Homo sapiens]
          Length = 632

 Score = 82.4 bits (202), Expect = 2e-16
 Identities = 58/185 (31%), Positives = 100/185 (54%), Gaps = 6/185 (3%)

Query: 5   PNENKKISGYAQNFKNGSCVLDLSKCLFIQGKLLFAEPKDAGFPFSQDINSHLASLSMAR 64
           P E  +I G  ++ +    +L  S   FIQ   L     +A +  +Q+    L  L +  
Sbjct: 376 PYEIDEILG-VRDLRKVLALLQKSDDPFIQQVALLTLSNNANYSCNQETIRKLGGLPIIA 434

Query: 65  NTSPTPDPTVRE-ALCAPDNLNASIESQGQIKMYINEVCRETVSRCCNSFLQQAGLNLLI 123
           N     DP ++E AL A +NL+ + E+QG++++Y+N+V  + ++   NS +Q  GL  L 
Sbjct: 435 NMINKTDPHIKEKALMAMNNLSENYENQGRLQVYMNKVMDDIMASNLNSAVQVVGLKFLT 494

Query: 124 SMTVIN---NMLAKSASDLKFPLISEGSGCAKVQVLKPLMGLSEKPVLAGELVGAQMLFS 180
           +MT+ N   ++L  S ++  F L+S+G G  KV++LK L   +E P +  +L+  Q+  S
Sbjct: 495 NMTITNDYQHLLVNSIANF-FRLLSQGGGKIKVEILKILSNFAENPDMLKKLLSTQVPAS 553

Query: 181 FMSLF 185
           F SL+
Sbjct: 554 FSSLY 558


>gi|239757861 PREDICTED: similar to armadillo repeat containing,
            X-linked 4 [Homo sapiens]
          Length = 2382

 Score = 68.2 bits (165), Expect = 4e-12
 Identities = 43/145 (29%), Positives = 83/145 (57%), Gaps = 5/145 (3%)

Query: 45   AGFPFSQDINSHLASLSMARNTSPTPDPTVRE-ALCAPDNLNASIESQGQIKMYINEVCR 103
            A + +S ++  ++  +S+  +    P P+VR+ AL A +N++ + E+  ++K Y+N+VC 
Sbjct: 2162 ADYSYSHEVVRNVGGISVIESLLNNPYPSVRQKALNALNNISVAAENHRKVKTYLNQVCE 2221

Query: 104  ETVSRCCNSFLQQAGLNLLISMTVIN---NMLAKSASDLKFPLISEGSGCAKVQVLKPLM 160
            +TV+   NS +Q AGL L+  +T+ +   +M+    S+    L++ GSG  K  VL  L+
Sbjct: 2222 DTVTYPLNSNVQLAGLRLIRHLTITSEYQHMVTNYISEF-LRLLTVGSGETKDHVLGMLL 2280

Query: 161  GLSEKPVLAGELVGAQMLFSFMSLF 185
              S+ P +  +L+ A    S +++F
Sbjct: 2281 NFSKNPSMTKDLLIANAPTSLINIF 2305


>gi|238776797 SVH protein isoform e [Homo sapiens]
          Length = 284

 Score = 61.6 bits (148), Expect = 4e-10
 Identities = 42/114 (36%), Positives = 67/114 (58%), Gaps = 5/114 (4%)

Query: 44  DAGFPFSQDINSHLASLSMARNTSPTPDPTVRE-ALCAPDNLNASIESQGQIKMYINEVC 102
           +A F  +Q I   L  + +  N     + +++E AL A +NL+ ++E+Q +IK+YI++VC
Sbjct: 89  NAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKIYISQVC 148

Query: 103 RETVSRCCNSFLQQAGLNLLISMTVIN---NMLAKSASDLKFPLISEGSGCAKV 153
            +  S   NS +Q AGL LL +MTV N   +ML    +DL F ++  G+G  KV
Sbjct: 149 EDVFSGPLNSAVQLAGLTLLTNMTVTNDHQHMLHSYITDL-FQVLLTGNGNTKV 201


>gi|169165522 PREDICTED: similar to SVH protein isoform 1 [Homo
           sapiens]
          Length = 284

 Score = 61.6 bits (148), Expect = 4e-10
 Identities = 42/114 (36%), Positives = 67/114 (58%), Gaps = 5/114 (4%)

Query: 44  DAGFPFSQDINSHLASLSMARNTSPTPDPTVRE-ALCAPDNLNASIESQGQIKMYINEVC 102
           +A F  +Q I   L  + +  N     + +++E AL A +NL+ ++E+Q +IK+YI++VC
Sbjct: 89  NAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKIYISQVC 148

Query: 103 RETVSRCCNSFLQQAGLNLLISMTVIN---NMLAKSASDLKFPLISEGSGCAKV 153
            +  S   NS +Q AGL LL +MTV N   +ML    +DL F ++  G+G  KV
Sbjct: 149 EDVFSGPLNSAVQLAGLRLLTNMTVTNDHQHMLHSYITDL-FQVLLTGNGNTKV 201


>gi|169165931 PREDICTED: similar to SVH protein isoform 1 [Homo
           sapiens]
          Length = 284

 Score = 60.5 bits (145), Expect = 9e-10
 Identities = 41/114 (35%), Positives = 67/114 (58%), Gaps = 5/114 (4%)

Query: 44  DAGFPFSQDINSHLASLSMARNTSPTPDPTVRE-ALCAPDNLNASIESQGQIKMYINEVC 102
           +A F  +Q I   L  + +  N     + ++++ AL A +NL+ ++E+Q +IK+YI++VC
Sbjct: 89  NAAFSVNQAIIRELGGIPIVANKINHSNQSIKDKALNALNNLSVNVENQIKIKIYISQVC 148

Query: 103 RETVSRCCNSFLQQAGLNLLISMTVIN---NMLAKSASDLKFPLISEGSGCAKV 153
            +  S   NS +Q AGL LL +MTV N   +ML    +DL F ++  G+G  KV
Sbjct: 149 EDVFSGPLNSAVQLAGLRLLTNMTVTNDHQHMLHSYITDL-FQVLLTGNGNTKV 201


>gi|113414573 PREDICTED: similar to SVH protein isoform 2 [Homo
           sapiens]
          Length = 284

 Score = 60.5 bits (145), Expect = 9e-10
 Identities = 41/114 (35%), Positives = 67/114 (58%), Gaps = 5/114 (4%)

Query: 44  DAGFPFSQDINSHLASLSMARNTSPTPDPTVRE-ALCAPDNLNASIESQGQIKMYINEVC 102
           +A F  +Q I   L  + +  N     + ++++ AL A +NL+ ++E+Q +IK+YI++VC
Sbjct: 89  NAAFSVNQAIIRELGGIPIVANKINHSNQSIKDKALNALNNLSVNVENQIKIKIYISQVC 148

Query: 103 RETVSRCCNSFLQQAGLNLLISMTVIN---NMLAKSASDLKFPLISEGSGCAKV 153
            +  S   NS +Q AGL LL +MTV N   +ML    +DL F ++  G+G  KV
Sbjct: 149 EDVFSGPLNSAVQLAGLRLLTNMTVTNDHQHMLHSYITDL-FQVLLTGNGNTKV 201


>gi|216547715 basic helix-loop-helix domain containing, class B, 9
           [Homo sapiens]
          Length = 547

 Score = 60.5 bits (145), Expect = 9e-10
 Identities = 40/141 (28%), Positives = 77/141 (54%), Gaps = 4/141 (2%)

Query: 48  PFSQDINSHLASLSMARNTSPTPDPTVREALCAPDNLNASIESQGQIKMYINEVCRETVS 107
           PF+Q+  + +  +++  +    P P +R+      N  +  E Q +I++++  +C+ET+S
Sbjct: 355 PFAQEFINEVGVVTLIESLLSFPSPEMRKKTVITLNPPSGDERQRKIELHVKHMCKETMS 414

Query: 108 RCCNSFLQQAGLNLLISMT---VINNMLAKSASDLKFPLISEGSGCAKVQVLKPLMGLSE 164
              NS  QQ+GL +L  +T   V + ++A   S+L F L+S G+   +  VLK L+ +SE
Sbjct: 415 FPLNSPGQQSGLKILGQLTTDFVHHYIVANYFSEL-FHLLSSGNCKTRNLVLKLLLNMSE 473

Query: 165 KPVLAGELVGAQMLFSFMSLF 185
            P  A +++  + L +   +F
Sbjct: 474 NPTAARDMINMKALAALKLIF 494


>gi|216547682 basic helix-loop-helix domain containing, class B, 9
           [Homo sapiens]
          Length = 547

 Score = 60.5 bits (145), Expect = 9e-10
 Identities = 40/141 (28%), Positives = 77/141 (54%), Gaps = 4/141 (2%)

Query: 48  PFSQDINSHLASLSMARNTSPTPDPTVREALCAPDNLNASIESQGQIKMYINEVCRETVS 107
           PF+Q+  + +  +++  +    P P +R+      N  +  E Q +I++++  +C+ET+S
Sbjct: 355 PFAQEFINEVGVVTLIESLLSFPSPEMRKKTVITLNPPSGDERQRKIELHVKHMCKETMS 414

Query: 108 RCCNSFLQQAGLNLLISMT---VINNMLAKSASDLKFPLISEGSGCAKVQVLKPLMGLSE 164
              NS  QQ+GL +L  +T   V + ++A   S+L F L+S G+   +  VLK L+ +SE
Sbjct: 415 FPLNSPGQQSGLKILGQLTTDFVHHYIVANYFSEL-FHLLSSGNCKTRNLVLKLLLNMSE 473

Query: 165 KPVLAGELVGAQMLFSFMSLF 185
            P  A +++  + L +   +F
Sbjct: 474 NPTAARDMINMKALAALKLIF 494


>gi|216547672 basic helix-loop-helix domain containing, class B, 9
           [Homo sapiens]
          Length = 547

 Score = 60.5 bits (145), Expect = 9e-10
 Identities = 40/141 (28%), Positives = 77/141 (54%), Gaps = 4/141 (2%)

Query: 48  PFSQDINSHLASLSMARNTSPTPDPTVREALCAPDNLNASIESQGQIKMYINEVCRETVS 107
           PF+Q+  + +  +++  +    P P +R+      N  +  E Q +I++++  +C+ET+S
Sbjct: 355 PFAQEFINEVGVVTLIESLLSFPSPEMRKKTVITLNPPSGDERQRKIELHVKHMCKETMS 414

Query: 108 RCCNSFLQQAGLNLLISMT---VINNMLAKSASDLKFPLISEGSGCAKVQVLKPLMGLSE 164
              NS  QQ+GL +L  +T   V + ++A   S+L F L+S G+   +  VLK L+ +SE
Sbjct: 415 FPLNSPGQQSGLKILGQLTTDFVHHYIVANYFSEL-FHLLSSGNCKTRNLVLKLLLNMSE 473

Query: 165 KPVLAGELVGAQMLFSFMSLF 185
            P  A +++  + L +   +F
Sbjct: 474 NPTAARDMINMKALAALKLIF 494


>gi|216547663 basic helix-loop-helix domain containing, class B, 9
           [Homo sapiens]
          Length = 547

 Score = 60.5 bits (145), Expect = 9e-10
 Identities = 40/141 (28%), Positives = 77/141 (54%), Gaps = 4/141 (2%)

Query: 48  PFSQDINSHLASLSMARNTSPTPDPTVREALCAPDNLNASIESQGQIKMYINEVCRETVS 107
           PF+Q+  + +  +++  +    P P +R+      N  +  E Q +I++++  +C+ET+S
Sbjct: 355 PFAQEFINEVGVVTLIESLLSFPSPEMRKKTVITLNPPSGDERQRKIELHVKHMCKETMS 414

Query: 108 RCCNSFLQQAGLNLLISMT---VINNMLAKSASDLKFPLISEGSGCAKVQVLKPLMGLSE 164
              NS  QQ+GL +L  +T   V + ++A   S+L F L+S G+   +  VLK L+ +SE
Sbjct: 415 FPLNSPGQQSGLKILGQLTTDFVHHYIVANYFSEL-FHLLSSGNCKTRNLVLKLLLNMSE 473

Query: 165 KPVLAGELVGAQMLFSFMSLF 185
            P  A +++  + L +   +F
Sbjct: 474 NPTAARDMINMKALAALKLIF 494


>gi|216547655 basic helix-loop-helix domain containing, class B, 9
           [Homo sapiens]
          Length = 547

 Score = 60.5 bits (145), Expect = 9e-10
 Identities = 40/141 (28%), Positives = 77/141 (54%), Gaps = 4/141 (2%)

Query: 48  PFSQDINSHLASLSMARNTSPTPDPTVREALCAPDNLNASIESQGQIKMYINEVCRETVS 107
           PF+Q+  + +  +++  +    P P +R+      N  +  E Q +I++++  +C+ET+S
Sbjct: 355 PFAQEFINEVGVVTLIESLLSFPSPEMRKKTVITLNPPSGDERQRKIELHVKHMCKETMS 414

Query: 108 RCCNSFLQQAGLNLLISMT---VINNMLAKSASDLKFPLISEGSGCAKVQVLKPLMGLSE 164
              NS  QQ+GL +L  +T   V + ++A   S+L F L+S G+   +  VLK L+ +SE
Sbjct: 415 FPLNSPGQQSGLKILGQLTTDFVHHYIVANYFSEL-FHLLSSGNCKTRNLVLKLLLNMSE 473

Query: 165 KPVLAGELVGAQMLFSFMSLF 185
            P  A +++  + L +   +F
Sbjct: 474 NPTAARDMINMKALAALKLIF 494


>gi|216547646 basic helix-loop-helix domain containing, class B, 9
           [Homo sapiens]
          Length = 547

 Score = 60.5 bits (145), Expect = 9e-10
 Identities = 40/141 (28%), Positives = 77/141 (54%), Gaps = 4/141 (2%)

Query: 48  PFSQDINSHLASLSMARNTSPTPDPTVREALCAPDNLNASIESQGQIKMYINEVCRETVS 107
           PF+Q+  + +  +++  +    P P +R+      N  +  E Q +I++++  +C+ET+S
Sbjct: 355 PFAQEFINEVGVVTLIESLLSFPSPEMRKKTVITLNPPSGDERQRKIELHVKHMCKETMS 414

Query: 108 RCCNSFLQQAGLNLLISMT---VINNMLAKSASDLKFPLISEGSGCAKVQVLKPLMGLSE 164
              NS  QQ+GL +L  +T   V + ++A   S+L F L+S G+   +  VLK L+ +SE
Sbjct: 415 FPLNSPGQQSGLKILGQLTTDFVHHYIVANYFSEL-FHLLSSGNCKTRNLVLKLLLNMSE 473

Query: 165 KPVLAGELVGAQMLFSFMSLF 185
            P  A +++  + L +   +F
Sbjct: 474 NPTAARDMINMKALAALKLIF 494


>gi|216547639 basic helix-loop-helix domain containing, class B, 9
           [Homo sapiens]
          Length = 547

 Score = 60.5 bits (145), Expect = 9e-10
 Identities = 40/141 (28%), Positives = 77/141 (54%), Gaps = 4/141 (2%)

Query: 48  PFSQDINSHLASLSMARNTSPTPDPTVREALCAPDNLNASIESQGQIKMYINEVCRETVS 107
           PF+Q+  + +  +++  +    P P +R+      N  +  E Q +I++++  +C+ET+S
Sbjct: 355 PFAQEFINEVGVVTLIESLLSFPSPEMRKKTVITLNPPSGDERQRKIELHVKHMCKETMS 414

Query: 108 RCCNSFLQQAGLNLLISMT---VINNMLAKSASDLKFPLISEGSGCAKVQVLKPLMGLSE 164
              NS  QQ+GL +L  +T   V + ++A   S+L F L+S G+   +  VLK L+ +SE
Sbjct: 415 FPLNSPGQQSGLKILGQLTTDFVHHYIVANYFSEL-FHLLSSGNCKTRNLVLKLLLNMSE 473

Query: 165 KPVLAGELVGAQMLFSFMSLF 185
            P  A +++  + L +   +F
Sbjct: 474 NPTAARDMINMKALAALKLIF 494


>gi|39930463 basic helix-loop-helix domain containing, class B, 9
           [Homo sapiens]
          Length = 547

 Score = 60.5 bits (145), Expect = 9e-10
 Identities = 40/141 (28%), Positives = 77/141 (54%), Gaps = 4/141 (2%)

Query: 48  PFSQDINSHLASLSMARNTSPTPDPTVREALCAPDNLNASIESQGQIKMYINEVCRETVS 107
           PF+Q+  + +  +++  +    P P +R+      N  +  E Q +I++++  +C+ET+S
Sbjct: 355 PFAQEFINEVGVVTLIESLLSFPSPEMRKKTVITLNPPSGDERQRKIELHVKHMCKETMS 414

Query: 108 RCCNSFLQQAGLNLLISMT---VINNMLAKSASDLKFPLISEGSGCAKVQVLKPLMGLSE 164
              NS  QQ+GL +L  +T   V + ++A   S+L F L+S G+   +  VLK L+ +SE
Sbjct: 415 FPLNSPGQQSGLKILGQLTTDFVHHYIVANYFSEL-FHLLSSGNCKTRNLVLKLLLNMSE 473

Query: 165 KPVLAGELVGAQMLFSFMSLF 185
            P  A +++  + L +   +F
Sbjct: 474 NPTAARDMINMKALAALKLIF 494


>gi|41054846 armadillo repeat containing, X-linked 5 [Homo sapiens]
          Length = 558

 Score = 55.1 bits (131), Expect = 4e-08
 Identities = 57/197 (28%), Positives = 90/197 (45%), Gaps = 13/197 (6%)

Query: 3   YSPNENK---KISGYA---QNFKNGSCVLDLSKCLFIQGKLLFAEPKDAGFPFSQDINSH 56
           Y PN      K  G++   + F     +L L+K  FI             +PF+QDI   
Sbjct: 291 YGPNPKACHCKSRGFSLEPKEFDKLVALLKLTKDPFIHEIATMIMGISPAYPFTQDIIHD 350

Query: 57  LASLSMARNTSPTPDPTVRE---ALCAPDNLNASIESQGQIKMYINEVCRETVSRCCNSF 113
           +    M  N     +P V+E   AL   D+ + S E     + YI++VC+  +S   NS 
Sbjct: 351 VGITVMIENL--VNNPNVKEHPGALSMVDDSSESSEEPKSGESYIHQVCKGIISCPLNSP 408

Query: 114 LQQAGLNLL--ISMTVINNMLAKSASDLKFPLISEGSGCAKVQVLKPLMGLSEKPVLAGE 171
           +Q AGL LL  +S+   ++ +  S       L+++GS   K  VLK    LS+      E
Sbjct: 409 VQLAGLKLLGHLSIKFEDHYVITSYIPDFLTLLNKGSVKTKFYVLKVFSCLSKNHANTRE 468

Query: 172 LVGAQMLFSFMSLFIRN 188
           L+ A++L S ++ F +N
Sbjct: 469 LISAKVLSSLVAPFNKN 485


>gi|51702248 G protein-coupled receptor associated sorting protein 2
           [Homo sapiens]
          Length = 838

 Score = 48.9 bits (115), Expect = 3e-06
 Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 2/94 (2%)

Query: 94  IKMYINEVCRETVSRCCNSFLQQAGLNLL--ISMTVINNMLAKSASDLKFPLISEGSGCA 151
           I+ +I +VC ET++   +S  Q  G+ +L  ++MT+  + L  +       L++  +   
Sbjct: 675 IETFICQVCEETLAHSVDSLEQLTGIRMLRHLTMTIDYHTLIANYMSGFLSLLTTANART 734

Query: 152 KVQVLKPLMGLSEKPVLAGELVGAQMLFSFMSLF 185
           K  VLK L+ LSE P +A +L  A+ L  F+ LF
Sbjct: 735 KFHVLKMLLNLSENPAVAKKLFSAKALSIFVGLF 768


>gi|19923967 G protein-coupled receptor associated sorting protein 2
           [Homo sapiens]
          Length = 838

 Score = 48.9 bits (115), Expect = 3e-06
 Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 2/94 (2%)

Query: 94  IKMYINEVCRETVSRCCNSFLQQAGLNLL--ISMTVINNMLAKSASDLKFPLISEGSGCA 151
           I+ +I +VC ET++   +S  Q  G+ +L  ++MT+  + L  +       L++  +   
Sbjct: 675 IETFICQVCEETLAHSVDSLEQLTGIRMLRHLTMTIDYHTLIANYMSGFLSLLTTANART 734

Query: 152 KVQVLKPLMGLSEKPVLAGELVGAQMLFSFMSLF 185
           K  VLK L+ LSE P +A +L  A+ L  F+ LF
Sbjct: 735 KFHVLKMLLNLSENPAVAKKLFSAKALSIFVGLF 768


>gi|150378528 G protein-coupled receptor associated sorting protein 1
            [Homo sapiens]
          Length = 1395

 Score = 44.3 bits (103), Expect = 6e-05
 Identities = 28/96 (29%), Positives = 51/96 (53%), Gaps = 2/96 (2%)

Query: 94   IKMYINEVCRETVSRCCNSFLQQAGLNLLISMTVINNMLAKSASDLK--FPLISEGSGCA 151
            I+ YI +VC ET++   +S  Q +G+ ++  +T   +     A+ +     L++ G+   
Sbjct: 1233 IQTYICKVCEETLAYSVDSPEQLSGIRMIRHLTTTTDYHTLVANYMSGFLSLLATGNAKT 1292

Query: 152  KVQVLKPLMGLSEKPVLAGELVGAQMLFSFMSLFIR 187
            +  VLK L+ LSE   +  EL+ A+ +  F+ LF R
Sbjct: 1293 RFHVLKMLLNLSENLFMTKELLSAEAVSEFIGLFNR 1328


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.133    0.383 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,752,932
Number of Sequences: 37866
Number of extensions: 265133
Number of successful extensions: 660
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 590
Number of HSP's gapped (non-prelim): 48
length of query: 189
length of database: 18,247,518
effective HSP length: 96
effective length of query: 93
effective length of database: 14,612,382
effective search space: 1358951526
effective search space used: 1358951526
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.