Guide to the Human Genome
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Name: ELMOD1 Sequence: fasta or formatted (334aa) NCBI GI: 112181294
Description:

ELMO/CED-12 domain containing 1 isoform 1

Not currently referenced in the text

Other entries for this name:
alt prot {326aa} ELMO/CED-12 domain containing 1 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         19           2
 C cysteine            3.0         10           1
 D aspartate           5.4         18           2
 E glutamate           6.9         23           2
 F phenylalanine       5.4         18           1
 G glycine             3.9         13           1
 H histidine           2.7          9           1
 I isoleucine          7.2         24           2
 K lysine              8.7         29           2
 L leucine            11.1         37           2
 M methionine          3.9         13           1
 N asparagine          3.9         13           1
 P proline             4.2         14           1
 Q glutamine           4.8         16           2
 R arginine            5.7         19           2
 S serine              5.4         18           1
 T threonine           4.2         14           1
 V valine              3.3         11           1
 W tryptophan          1.5          5           1
 Y tyrosine            3.3         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ELMO/CED-12 domain containing 1 isoform 1 
ELMOD1                0.967   ELMO/CED-12 domain containing 1 isoform 2 
ELMOD2                0.421   ELMO/CED-12 domain containing 2 
ELMOD3                0.039   ELMO/CED-12 domain containing 3 isoform b 
ELMOD3                0.039   ELMO/CED-12 domain containing 3 isoform b 
ELMOD3                0.039   ELMO/CED-12 domain containing 3 isoform b 
ELMOD3                0.033   ELMO/CED-12 domain containing 3 isoform a 
ITPR2                 0.008   inositol 1,4,5-triphosphate receptor, type 2 
AKAP8                 0.008   A-kinase anchor protein 8 
INPP5B                0.006   inositol polyphosphate-5-phosphatase, 75kDa precurs...
CYFIP1                0.005   cytoplasmic FMR1 interacting protein 1 isoform a [Ho...
DST                   0.005   dystonin isoform 4 
DST                   0.005   dystonin isoform 3 
DST                   0.005   dystonin isoform 2 
DST                   0.005   dystonin isoform 1 
DST                   0.005   dystonin isoform 1eA precursor 
DNAH1                 0.005   dynein, axonemal, heavy chain 1 
GOPC                  0.005   golgi associated PDZ and coiled-coil motif containin...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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