Guide to the Human Genome
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Name: ELMOD2 Sequence: fasta or formatted (293aa) NCBI GI: 24308456
Description:

ELMO/CED-12 domain containing 2

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.4         10           1
 C cysteine            1.7          5           1
 D aspartate           4.4         13           2
 E glutamate           7.5         22           3
 F phenylalanine       6.5         19           2
 G glycine             4.4         13           1
 H histidine           3.4         10           1
 I isoleucine          5.8         17           1
 K lysine              8.9         26           2
 L leucine            11.9         35           3
 M methionine          4.1         12           1
 N asparagine          4.8         14           1
 P proline             2.7          8           1
 Q glutamine           4.1         12           1
 R arginine            3.8         11           1
 S serine              5.5         16           1
 T threonine           4.1         12           1
 V valine              4.8         14           2
 W tryptophan          2.0          6           1
 Y tyrosine            6.1         18           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ELMO/CED-12 domain containing 2 
ELMOD1                0.481   ELMO/CED-12 domain containing 1 isoform 2 
ELMOD1                0.476   ELMO/CED-12 domain containing 1 isoform 1 
ELMOD3                0.060   ELMO/CED-12 domain containing 3 isoform b 
ELMOD3                0.060   ELMO/CED-12 domain containing 3 isoform b 
ELMOD3                0.060   ELMO/CED-12 domain containing 3 isoform b 
ELMOD3                0.060   ELMO/CED-12 domain containing 3 isoform a 
ELMO3                 0.017   engulfment and cell motility 3 
CUL2                  0.017   cullin 2 
ELMO1                 0.014   engulfment and cell motility 1 isoform 1 
SYNE2                 0.012   spectrin repeat containing, nuclear envelope 2 isof...
SYNE2                 0.012   spectrin repeat containing, nuclear envelope 2 isof...
CYP24A1               0.007   cytochrome P450 family 24 subfamily A polypeptide 1 ...
MTUS1                 0.007   mitochondrial tumor suppressor 1 isoform 5 
MTUS1                 0.007   mitochondrial tumor suppressor 1 isoform 1 
MTUS1                 0.007   mitochondrial tumor suppressor 1 isoform 2 
MTUS1                 0.007   mitochondrial tumor suppressor 1 isoform 4 
ZC3HAV1               0.007   zinc finger antiviral protein isoform 1 
ZC3HAV1               0.007   zinc finger antiviral protein isoform 2 
ANKRD30B              0.007   ankyrin repeat domain 30B 
RPTOR                 0.007   raptor isoform 1 
RPTOR                 0.007   raptor isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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