Search of human proteins with 169211874

Search of human proteins with 169211874

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169211874 PREDICTED: similar to hCG1777996 [Homo sapiens]
         (217 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169211405 PREDICTED: similar to hCG1777996 [Homo sapiens]          461   e-130
gi|169211874 PREDICTED: similar to hCG1777996 [Homo sapiens]          461   e-130
gi|169210992 PREDICTED: hypothetical protein LOC100131693 [Homo ...   461   e-130
gi|4503535 eukaryotic translation initiation factor 4E isoform 1...   454   e-128
gi|194578907 eukaryotic translation initiation factor 4E isoform...   443   e-125
gi|194578909 eukaryotic translation initiation factor 4E isoform...   438   e-123
gi|150378456 eukaryotic translation initiation factor 4E family ...   303   6e-83
gi|4757702 eukaryotic translation initiation factor 4E member 2 ...   129   2e-30
gi|197382708 eukaryotic translation initiation factor 4E family ...    83   2e-16
gi|197382664 eukaryotic translation initiation factor 4E family ...    54   8e-08
gi|197382649 eukaryotic translation initiation factor 4E family ...    54   8e-08
gi|27659734 eukaryotic translation initiation factor 4E family m...    54   8e-08
gi|15029506 homeobox D8 [Homo sapiens]                                 29   2.7  
gi|54112403 chromodomain helicase DNA binding protein 7 [Homo sa...    29   3.5  
gi|24371260 fibronectin type III domain containing 5 [Homo sapiens]    28   6.0  
gi|229577238 tetratricopeptide repeat domain 18 [Homo sapiens]         28   7.8  
gi|12056969 homeobox C8 [Homo sapiens]                                 28   7.8  
gi|13273317 homeobox B8 [Homo sapiens]                                 28   7.8  

>gi|169211405 PREDICTED: similar to hCG1777996 [Homo sapiens]
          Length = 217

 Score =  461 bits (1187), Expect = e-130
 Identities = 217/217 (100%), Positives = 217/217 (100%)

Query: 1   MATVEPETTPTPNPPTTEKEKTESNQEVANPEHYIKHPLQNRWALWFFKNDKSKTWQANL 60
           MATVEPETTPTPNPPTTEKEKTESNQEVANPEHYIKHPLQNRWALWFFKNDKSKTWQANL
Sbjct: 1   MATVEPETTPTPNPPTTEKEKTESNQEVANPEHYIKHPLQNRWALWFFKNDKSKTWQANL 60

Query: 61  WLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQ 120
           WLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQ
Sbjct: 61  WLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQ 120

Query: 121 QRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIG 180
           QRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIG
Sbjct: 121 QRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIG 180

Query: 181 RVYKERLGLPPKIVIGYQSHADTATKSGSTTKNRFVV 217
           RVYKERLGLPPKIVIGYQSHADTATKSGSTTKNRFVV
Sbjct: 181 RVYKERLGLPPKIVIGYQSHADTATKSGSTTKNRFVV 217


>gi|169211874 PREDICTED: similar to hCG1777996 [Homo sapiens]
          Length = 217

 Score =  461 bits (1187), Expect = e-130
 Identities = 217/217 (100%), Positives = 217/217 (100%)

Query: 1   MATVEPETTPTPNPPTTEKEKTESNQEVANPEHYIKHPLQNRWALWFFKNDKSKTWQANL 60
           MATVEPETTPTPNPPTTEKEKTESNQEVANPEHYIKHPLQNRWALWFFKNDKSKTWQANL
Sbjct: 1   MATVEPETTPTPNPPTTEKEKTESNQEVANPEHYIKHPLQNRWALWFFKNDKSKTWQANL 60

Query: 61  WLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQ 120
           WLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQ
Sbjct: 61  WLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQ 120

Query: 121 QRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIG 180
           QRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIG
Sbjct: 121 QRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIG 180

Query: 181 RVYKERLGLPPKIVIGYQSHADTATKSGSTTKNRFVV 217
           RVYKERLGLPPKIVIGYQSHADTATKSGSTTKNRFVV
Sbjct: 181 RVYKERLGLPPKIVIGYQSHADTATKSGSTTKNRFVV 217


>gi|169210992 PREDICTED: hypothetical protein LOC100131693 [Homo
           sapiens]
          Length = 217

 Score =  461 bits (1187), Expect = e-130
 Identities = 217/217 (100%), Positives = 217/217 (100%)

Query: 1   MATVEPETTPTPNPPTTEKEKTESNQEVANPEHYIKHPLQNRWALWFFKNDKSKTWQANL 60
           MATVEPETTPTPNPPTTEKEKTESNQEVANPEHYIKHPLQNRWALWFFKNDKSKTWQANL
Sbjct: 1   MATVEPETTPTPNPPTTEKEKTESNQEVANPEHYIKHPLQNRWALWFFKNDKSKTWQANL 60

Query: 61  WLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQ 120
           WLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQ
Sbjct: 61  WLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQ 120

Query: 121 QRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIG 180
           QRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIG
Sbjct: 121 QRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIG 180

Query: 181 RVYKERLGLPPKIVIGYQSHADTATKSGSTTKNRFVV 217
           RVYKERLGLPPKIVIGYQSHADTATKSGSTTKNRFVV
Sbjct: 181 RVYKERLGLPPKIVIGYQSHADTATKSGSTTKNRFVV 217


>gi|4503535 eukaryotic translation initiation factor 4E isoform 1
           [Homo sapiens]
          Length = 217

 Score =  454 bits (1169), Expect = e-128
 Identities = 215/217 (99%), Positives = 216/217 (99%)

Query: 1   MATVEPETTPTPNPPTTEKEKTESNQEVANPEHYIKHPLQNRWALWFFKNDKSKTWQANL 60
           MATVEPETTPTPNPPTTE+EKTESNQEVANPEHYIKHPLQNRWALWFFKNDKSKTWQANL
Sbjct: 1   MATVEPETTPTPNPPTTEEEKTESNQEVANPEHYIKHPLQNRWALWFFKNDKSKTWQANL 60

Query: 61  WLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQ 120
            LISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQ
Sbjct: 61  RLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQ 120

Query: 121 QRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIG 180
           QRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIG
Sbjct: 121 QRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIG 180

Query: 181 RVYKERLGLPPKIVIGYQSHADTATKSGSTTKNRFVV 217
           RVYKERLGLPPKIVIGYQSHADTATKSGSTTKNRFVV
Sbjct: 181 RVYKERLGLPPKIVIGYQSHADTATKSGSTTKNRFVV 217


>gi|194578907 eukaryotic translation initiation factor 4E isoform 3
           [Homo sapiens]
          Length = 237

 Score =  443 bits (1139), Expect = e-125
 Identities = 209/211 (99%), Positives = 210/211 (99%)

Query: 7   ETTPTPNPPTTEKEKTESNQEVANPEHYIKHPLQNRWALWFFKNDKSKTWQANLWLISKF 66
           ETTPTPNPPTTE+EKTESNQEVANPEHYIKHPLQNRWALWFFKNDKSKTWQANL LISKF
Sbjct: 27  ETTPTPNPPTTEEEKTESNQEVANPEHYIKHPLQNRWALWFFKNDKSKTWQANLRLISKF 86

Query: 67  DTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDL 126
           DTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDL
Sbjct: 87  DTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDL 146

Query: 127 DRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKER 186
           DRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKER
Sbjct: 147 DRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKER 206

Query: 187 LGLPPKIVIGYQSHADTATKSGSTTKNRFVV 217
           LGLPPKIVIGYQSHADTATKSGSTTKNRFVV
Sbjct: 207 LGLPPKIVIGYQSHADTATKSGSTTKNRFVV 237


>gi|194578909 eukaryotic translation initiation factor 4E isoform 2
           [Homo sapiens]
          Length = 248

 Score =  438 bits (1127), Expect = e-123
 Identities = 215/248 (86%), Positives = 216/248 (87%), Gaps = 31/248 (12%)

Query: 1   MATVEPETTPTPNPPTTEKEKTESNQEVANPEHYIKHPLQNRWALWFFKNDKSKTWQANL 60
           MATVEPETTPTPNPPTTE+EKTESNQEVANPEHYIKHPLQNRWALWFFKNDKSKTWQANL
Sbjct: 1   MATVEPETTPTPNPPTTEEEKTESNQEVANPEHYIKHPLQNRWALWFFKNDKSKTWQANL 60

Query: 61  WLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQ 120
            LISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQ
Sbjct: 61  RLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQ 120

Query: 121 QRRSDLDRFWLET-------------------------------LLCLIGESFDDYSDDV 149
           QRRSDLDRFWLET                               LLCLIGESFDDYSDDV
Sbjct: 121 QRRSDLDRFWLETRWDLAMLPRLVSNFWPQVILPLQPPKVLELQLLCLIGESFDDYSDDV 180

Query: 150 CGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGS 209
           CGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGS
Sbjct: 181 CGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGS 240

Query: 210 TTKNRFVV 217
           TTKNRFVV
Sbjct: 241 TTKNRFVV 248


>gi|150378456 eukaryotic translation initiation factor 4E family
           member 1B [Homo sapiens]
          Length = 242

 Score =  303 bits (777), Expect = 6e-83
 Identities = 146/220 (66%), Positives = 170/220 (77%), Gaps = 13/220 (5%)

Query: 7   ETTPT----PNPPTT-----EKEKTESNQEVANPEHYIKHPLQNRWALWFFKNDKSKTWQ 57
           E TPT    PN P T      K +T    EV        HPLQNRWALWFFKND+S+ WQ
Sbjct: 27  ERTPTGEKSPNSPRTLLSLRGKARTGGPMEVKLE----LHPLQNRWALWFFKNDRSRAWQ 82

Query: 58  ANLWLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITL 117
            NL L++K DTVEDFWALY+HIQL+S L  GCDY+LFKDGI+PMWED +NKRGGRWL++L
Sbjct: 83  DNLHLVTKVDTVEDFWALYSHIQLASKLSSGCDYALFKDGIQPMWEDSRNKRGGRWLVSL 142

Query: 118 NKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENREAVT 177
            KQQR  +LDR WLETLLCLIGESF+++S +VCGAVVN+R KGDKIA+WT E EN+  V 
Sbjct: 143 AKQQRHIELDRLWLETLLCLIGESFEEHSREVCGAVVNIRTKGDKIAVWTREAENQAGVL 202

Query: 178 HIGRVYKERLGLPPKIVIGYQSHADTATKSGSTTKNRFVV 217
           H+GRVYKERLGL PK +IGYQ+HADTATKS S  KN+FVV
Sbjct: 203 HVGRVYKERLGLSPKTIIGYQAHADTATKSNSLAKNKFVV 242


>gi|4757702 eukaryotic translation initiation factor 4E member 2
           [Homo sapiens]
          Length = 245

 Score =  129 bits (324), Expect = 2e-30
 Identities = 68/210 (32%), Positives = 111/210 (52%), Gaps = 16/210 (7%)

Query: 18  EKEKTESNQEVANPEHYI------KHPLQNRWALWFFKND-----KSKTWQANLWLISKF 66
           EKEKTE ++  ++ +         +HPLQ  +  W+ +        S++++ N+  I  F
Sbjct: 29  EKEKTERDKNQSSSKRKAVVPGPAEHPLQYNYTFWYSRRTPGRPTSSQSYEQNIKQIGTF 88

Query: 67  DTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDL 126
            +VE FW  Y+H+    +L    D+ LFK+GI+PMWED+ NK GG+W+I L    R+   
Sbjct: 89  ASVEQFWRFYSHMVRPGDLTGHSDFHLFKEGIKPMWEDDANKNGGKWIIRL----RKGLA 144

Query: 127 DRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKER 186
            R W   +L ++GE F    +++CGAVV+VR + D I+IW     ++     I    +  
Sbjct: 145 SRCWENLILAMLGEQF-MVGEEICGAVVSVRFQEDIISIWNKTASDQATTARIRDTLRRV 203

Query: 187 LGLPPKIVIGYQSHADTATKSGSTTKNRFV 216
           L LPP  ++ Y++H D+    G     R +
Sbjct: 204 LNLPPNTIMEYKTHTDSIKMPGRLGPQRLL 233


>gi|197382708 eukaryotic translation initiation factor 4E family
           member 3 isoform a [Homo sapiens]
          Length = 224

 Score = 82.8 bits (203), Expect = 2e-16
 Identities = 53/182 (29%), Positives = 84/182 (46%), Gaps = 11/182 (6%)

Query: 38  PLQNRWALWFFKNDKSKT---WQANLWLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLF 94
           PL + W  W  ++    T     +NL  I    TV+ FW++YN+I   ++L   C Y L 
Sbjct: 48  PLHSSWTFWLDRSLPGATAAECASNLKKIYTVQTVQIFWSVYNNIPPVTSLPLRCSYHLM 107

Query: 95  KDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYS---DDVCG 151
           +    P+WE+E N +GG W + + K    +     W E LL  IGE F D +   D+V G
Sbjct: 108 RGERRPLWEEESNAKGGVWKMKVPKDSTST----VWKELLLATIGEQFTDCAAADDEVIG 163

Query: 152 AVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGSTT 211
             V+VR + D + +W          T + ++Y+    +  K V  Y+ H +     G   
Sbjct: 164 VSVSVRDREDVVQVWNVNASLVGEATVLEKIYELLPHITFKAVF-YKPHEEHHAFEGGRG 222

Query: 212 KN 213
           K+
Sbjct: 223 KH 224


>gi|197382664 eukaryotic translation initiation factor 4E family
           member 3 isoform b [Homo sapiens]
          Length = 118

 Score = 54.3 bits (129), Expect = 8e-08
 Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 8/117 (6%)

Query: 100 PMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYS---DDVCGAVVNV 156
           P+WE+E N +GG W + + K    +     W E LL  IGE F D +   D+V G  V+V
Sbjct: 7   PLWEEESNAKGGVWKMKVPKDSTST----VWKELLLATIGEQFTDCAAADDEVIGVSVSV 62

Query: 157 RAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGSTTKN 213
           R + D + +W          T + ++Y+    +  K V  Y+ H +     G   K+
Sbjct: 63  RDREDVVQVWNVNASLVGEATVLEKIYELLPHITFKAVF-YKPHEEHHAFEGGRGKH 118


>gi|197382649 eukaryotic translation initiation factor 4E family
           member 3 isoform b [Homo sapiens]
          Length = 118

 Score = 54.3 bits (129), Expect = 8e-08
 Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 8/117 (6%)

Query: 100 PMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYS---DDVCGAVVNV 156
           P+WE+E N +GG W + + K    +     W E LL  IGE F D +   D+V G  V+V
Sbjct: 7   PLWEEESNAKGGVWKMKVPKDSTST----VWKELLLATIGEQFTDCAAADDEVIGVSVSV 62

Query: 157 RAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGSTTKN 213
           R + D + +W          T + ++Y+    +  K V  Y+ H +     G   K+
Sbjct: 63  RDREDVVQVWNVNASLVGEATVLEKIYELLPHITFKAVF-YKPHEEHHAFEGGRGKH 118


>gi|27659734 eukaryotic translation initiation factor 4E family
           member 3 isoform b [Homo sapiens]
          Length = 118

 Score = 54.3 bits (129), Expect = 8e-08
 Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 8/117 (6%)

Query: 100 PMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYS---DDVCGAVVNV 156
           P+WE+E N +GG W + + K    +     W E LL  IGE F D +   D+V G  V+V
Sbjct: 7   PLWEEESNAKGGVWKMKVPKDSTST----VWKELLLATIGEQFTDCAAADDEVIGVSVSV 62

Query: 157 RAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGSTTKN 213
           R + D + +W          T + ++Y+    +  K V  Y+ H +     G   K+
Sbjct: 63  RDREDVVQVWNVNASLVGEATVLEKIYELLPHITFKAVF-YKPHEEHHAFEGGRGKH 118


>gi|15029506 homeobox D8 [Homo sapiens]
          Length = 290

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 18/52 (34%), Positives = 25/52 (48%)

Query: 3   TVEPETTPTPNPPTTEKEKTESNQEVANPEHYIKHPLQNRWALWFFKNDKSK 54
           T+E E     NP  T K + E +  +A  E  +K   QNR   W  +N+K K
Sbjct: 209 TLELEKEFLFNPYLTRKRRIEVSHALALTERQVKIWFQNRRMKWKKENNKDK 260


>gi|54112403 chromodomain helicase DNA binding protein 7 [Homo
           sapiens]
          Length = 2997

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)

Query: 5   EPETTPTPNPPTTEKEKTESNQEVANPEHYIKHPLQN-RWALWFFKN 50
           EPET     PP  + +K+ES++E  N     ++ L+   W L+ + N
Sbjct: 939 EPETERVERPPADDWKKSESSREYKNNNKLREYQLEGVNWLLFNWYN 985


>gi|24371260 fibronectin type III domain containing 5 [Homo sapiens]
          Length = 137

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 11/21 (52%), Positives = 13/21 (61%)

Query: 13  NPPTTEKEKTESNQEVANPEH 33
           N P   KEKT+S  E + PEH
Sbjct: 107 NEPNNNKEKTKSASETSTPEH 127


>gi|229577238 tetratricopeptide repeat domain 18 [Homo sapiens]
          Length = 1121

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 14/46 (30%), Positives = 21/46 (45%)

Query: 147 DDVCGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPK 192
           DDV G V  +    +++ ++  E E  E        YKERL   P+
Sbjct: 622 DDVQGTVATIYTSSEQLQLFAFEAEVNENFEMAAAYYKERLVREPQ 667


>gi|12056969 homeobox C8 [Homo sapiens]
          Length = 242

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 17/52 (32%), Positives = 24/52 (46%)

Query: 3   TVEPETTPTPNPPTTEKEKTESNQEVANPEHYIKHPLQNRWALWFFKNDKSK 54
           T+E E     NP  T K + E +  +   E  +K   QNR   W  +N+K K
Sbjct: 161 TLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDK 212


>gi|13273317 homeobox B8 [Homo sapiens]
          Length = 243

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 17/52 (32%), Positives = 24/52 (46%)

Query: 3   TVEPETTPTPNPPTTEKEKTESNQEVANPEHYIKHPLQNRWALWFFKNDKSK 54
           T+E E     NP  T K + E +  +   E  +K   QNR   W  +N+K K
Sbjct: 158 TLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDK 209


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.133    0.425 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,686,653
Number of Sequences: 37866
Number of extensions: 424536
Number of successful extensions: 1634
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1600
Number of HSP's gapped (non-prelim): 25
length of query: 217
length of database: 18,247,518
effective HSP length: 98
effective length of query: 119
effective length of database: 14,536,650
effective search space: 1729861350
effective search space used: 1729861350
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.