Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 169210045
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169210045 PREDICTED: hypothetical protein [Homo sapiens]
(143 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169210481 PREDICTED: hypothetical protein [Homo sapiens] 301 1e-82
gi|169210045 PREDICTED: hypothetical protein [Homo sapiens] 301 1e-82
gi|169210256 PREDICTED: hypothetical protein [Homo sapiens] 254 1e-68
gi|239752201 PREDICTED: hypothetical protein XP_002348147 [Homo ... 46 9e-06
gi|239748752 PREDICTED: hypothetical protein XP_002346787 [Homo ... 40 5e-04
gi|110832843 TBP-associated factor 4 [Homo sapiens] 40 5e-04
gi|20986497 mitogen-activated protein kinase 7 isoform 1 [Homo s... 40 9e-04
gi|209529736 mitogen-activated protein kinase 7 isoform 1 [Homo ... 40 9e-04
gi|209529734 mitogen-activated protein kinase 7 isoform 1 [Homo ... 40 9e-04
gi|20986499 mitogen-activated protein kinase 7 isoform 2 [Homo s... 40 9e-04
gi|45935385 SAM and SH3 domain containing 1 [Homo sapiens] 39 0.001
gi|62945417 dystrophia myotonica-containing WD repeat motif prot... 39 0.001
gi|122692281 hypothetical protein LOC645369 [Homo sapiens] 39 0.001
gi|239753673 PREDICTED: hypothetical protein [Homo sapiens] 39 0.002
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 39 0.002
gi|239756693 PREDICTED: similar to coiled-coil domain containing... 38 0.003
gi|239749482 PREDICTED: hypothetical protein [Homo sapiens] 38 0.003
gi|110556644 zinc finger protein, multitype 1 [Homo sapiens] 38 0.003
gi|169211438 PREDICTED: hypothetical protein [Homo sapiens] 37 0.004
gi|169211910 PREDICTED: hypothetical protein [Homo sapiens] 37 0.004
gi|169211055 PREDICTED: hypothetical protein [Homo sapiens] 37 0.004
gi|239745068 PREDICTED: similar to hCG2042704 [Homo sapiens] 37 0.004
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 37 0.004
gi|150170729 microtubule associated serine/threonine kinase 3 [H... 37 0.004
gi|239743620 PREDICTED: hypothetical protein [Homo sapiens] 37 0.006
gi|169169586 PREDICTED: hypothetical protein [Homo sapiens] 37 0.006
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 37 0.006
gi|118766337 zinc finger protein of the cerebellum 5 [Homo sapiens] 37 0.006
gi|194272140 dendrin [Homo sapiens] 37 0.007
gi|222352122 hypothetical protein LOC284297 [Homo sapiens] 36 0.010
>gi|169210481 PREDICTED: hypothetical protein [Homo sapiens]
Length = 143
Score = 301 bits (771), Expect = 1e-82
Identities = 143/143 (100%), Positives = 143/143 (100%)
Query: 1 MCPPRPAPRRASRARRGLAPWDGAGAGAVTGPCPAAAQGARGSWPSPRCLPSDGGAREAP 60
MCPPRPAPRRASRARRGLAPWDGAGAGAVTGPCPAAAQGARGSWPSPRCLPSDGGAREAP
Sbjct: 1 MCPPRPAPRRASRARRGLAPWDGAGAGAVTGPCPAAAQGARGSWPSPRCLPSDGGAREAP 60
Query: 61 PTSAPHPRRPAGSPPALADREGRRSLVPQTSIQGQNFAQLSLARPWAGKRGHRQREPEAL 120
PTSAPHPRRPAGSPPALADREGRRSLVPQTSIQGQNFAQLSLARPWAGKRGHRQREPEAL
Sbjct: 61 PTSAPHPRRPAGSPPALADREGRRSLVPQTSIQGQNFAQLSLARPWAGKRGHRQREPEAL 120
Query: 121 RALRAGQELWNLSDDILILLDQD 143
RALRAGQELWNLSDDILILLDQD
Sbjct: 121 RALRAGQELWNLSDDILILLDQD 143
>gi|169210045 PREDICTED: hypothetical protein [Homo sapiens]
Length = 143
Score = 301 bits (771), Expect = 1e-82
Identities = 143/143 (100%), Positives = 143/143 (100%)
Query: 1 MCPPRPAPRRASRARRGLAPWDGAGAGAVTGPCPAAAQGARGSWPSPRCLPSDGGAREAP 60
MCPPRPAPRRASRARRGLAPWDGAGAGAVTGPCPAAAQGARGSWPSPRCLPSDGGAREAP
Sbjct: 1 MCPPRPAPRRASRARRGLAPWDGAGAGAVTGPCPAAAQGARGSWPSPRCLPSDGGAREAP 60
Query: 61 PTSAPHPRRPAGSPPALADREGRRSLVPQTSIQGQNFAQLSLARPWAGKRGHRQREPEAL 120
PTSAPHPRRPAGSPPALADREGRRSLVPQTSIQGQNFAQLSLARPWAGKRGHRQREPEAL
Sbjct: 61 PTSAPHPRRPAGSPPALADREGRRSLVPQTSIQGQNFAQLSLARPWAGKRGHRQREPEAL 120
Query: 121 RALRAGQELWNLSDDILILLDQD 143
RALRAGQELWNLSDDILILLDQD
Sbjct: 121 RALRAGQELWNLSDDILILLDQD 143
>gi|169210256 PREDICTED: hypothetical protein [Homo sapiens]
Length = 447
Score = 254 bits (650), Expect = 1e-68
Identities = 126/142 (88%), Positives = 129/142 (90%), Gaps = 2/142 (1%)
Query: 4 PRPAP--RRASRARRGLAPWDGAGAGAVTGPCPAAAQGARGSWPSPRCLPSDGGAREAPP 61
PR AP R + +R + AGAGAVTGPCPAAAQGARGSWPSPRCLPSDGGAREAPP
Sbjct: 306 PRSAPSSREPRQTKRRVGSRARAGAGAVTGPCPAAAQGARGSWPSPRCLPSDGGAREAPP 365
Query: 62 TSAPHPRRPAGSPPALADREGRRSLVPQTSIQGQNFAQLSLARPWAGKRGHRQREPEALR 121
TSAPHPRRPAGSPPALADREGRRSLVPQTSIQGQNFAQLSLARPWAGKRGHRQREPEALR
Sbjct: 366 TSAPHPRRPAGSPPALADREGRRSLVPQTSIQGQNFAQLSLARPWAGKRGHRQREPEALR 425
Query: 122 ALRAGQELWNLSDDILILLDQD 143
ALRAGQELWNLSDDILILLDQD
Sbjct: 426 ALRAGQELWNLSDDILILLDQD 447
>gi|239752201 PREDICTED: hypothetical protein XP_002348147 [Homo
sapiens]
Length = 935
Score = 46.2 bits (108), Expect = 9e-06
Identities = 36/89 (40%), Positives = 40/89 (44%), Gaps = 8/89 (8%)
Query: 9 RRASRARRGLA--PWDGAGAGAVTGPCPAAAQGARGSWPSPRCLPSDGGAREAP---PTS 63
R ASRAR+G + P AG P PAAA+ ARGSW PS R P
Sbjct: 833 RAASRARKGESRRPLPANSAGRPALPSPAAARSARGSWGLRASRPSRAAPRGPPNFQRCP 892
Query: 64 APHPRRPAGSP---PALADREGRRSLVPQ 89
AP PRR G P A GR S P+
Sbjct: 893 APRPRRRLGVSIVGPGRAHSAGRSSYSPK 921
>gi|239748752 PREDICTED: hypothetical protein XP_002346787 [Homo
sapiens]
Length = 278
Score = 40.4 bits (93), Expect = 5e-04
Identities = 32/87 (36%), Positives = 37/87 (42%), Gaps = 11/87 (12%)
Query: 4 PRPAPRRASRARRGLAPWDGAGAGAVTGPCPAAAQGARGSWPSPRCLPSDGGA---REAP 60
PRP P R R R W G G G PAA+ A + P PR P G + +P
Sbjct: 40 PRPPPARLPRNGRRGPLWKGRGP---AGRAPAAS--AETALPRPREPPEPGAGPSPKRSP 94
Query: 61 PTSAPHPRRPAGSPPALAD---REGRR 84
P AP A P + D REGRR
Sbjct: 95 PPRAPRASSLAAPEPQVGDWTSREGRR 121
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 40.4 bits (93), Expect = 5e-04
Identities = 29/81 (35%), Positives = 36/81 (44%), Gaps = 5/81 (6%)
Query: 1 MCPPRPAPRRASRARRGLAPWDGAGAGAVTGPCPAAAQGARGSWPSP----RCLPSDGGA 56
+ P P R A+ G G+ AGA A A+GA G+ P P R P GG
Sbjct: 43 LAPRTPEVRAAAAGALGNHVVSGSPAGAAGAGPAAPAEGAPGAAPEPPPAGRARPGGGGP 102
Query: 57 REAPPTSAPHPRRPAG-SPPA 76
+ P S P PAG +PPA
Sbjct: 103 QRPGPPSPRRPLVPAGPAPPA 123
Score = 32.7 bits (73), Expect = 0.11
Identities = 29/96 (30%), Positives = 37/96 (38%), Gaps = 3/96 (3%)
Query: 3 PPRPAPRRASRARRGLAPWDGAGAGAVTGPCPAAAQGARGSWPSPRCLPSDGGAREAPPT 62
PP P P A+ AR P G A P PAAAQ + +P P+ GG A +
Sbjct: 270 PPPPPPAPATLARPPGHP-AGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGG--PAGVS 326
Query: 63 SAPHPRRPAGSPPALADREGRRSLVPQTSIQGQNFA 98
P P A +P E + +V Q A
Sbjct: 327 GQPGPGAAAAAPAPGVKAESPKRVVQAAPPAAQTLA 362
Score = 29.6 bits (65), Expect = 0.90
Identities = 19/51 (37%), Positives = 20/51 (39%), Gaps = 11/51 (21%)
Query: 27 GAVTGPCPAAAQGARGSWPSPRCLPSDGGAREAPPTSAPHP---RRPAGSP 74
GA P PAA PSP P+ APP P P RP G P
Sbjct: 245 GAAAPPAPAA--------PSPPAAPAPAAPAAAPPPPPPAPATLARPPGHP 287
Score = 28.9 bits (63), Expect = 1.5
Identities = 32/99 (32%), Positives = 39/99 (39%), Gaps = 19/99 (19%)
Query: 1 MCPPRPAPRRASRARRGLAPWDGAGAGAVTGPCPAAAQGARGSWPSPR-----CLPSDGG 55
+ P PAP A L P AG+ P PAAA A G P+P P+
Sbjct: 114 LVPAGPAPPAAK-----LRPPPEGSAGSCA-PVPAAAAVAAGPEPAPAGPAKPAGPAALA 167
Query: 56 AREAP-------PTSAPHPRRPAGSPPALADREGRRSLV 87
AR P P P P +PAG P A G +L+
Sbjct: 168 ARAGPGPGPGPGPGPGPGPGKPAG-PGAAQTLNGSAALL 205
>gi|20986497 mitogen-activated protein kinase 7 isoform 1 [Homo
sapiens]
Length = 816
Score = 39.7 bits (91), Expect = 9e-04
Identities = 32/101 (31%), Positives = 40/101 (39%), Gaps = 18/101 (17%)
Query: 4 PRPAPRRASRARRGLAPWDGAGAGAVTGPCPAAAQGARGSWPSPRCLPSDGGAREAPPTS 63
P PAP + +P G A TGP P +A G P P C PP
Sbjct: 589 PAPAPTPTPTPVQPTSPPPGPVAQP-TGPQPQSAGSTSGPVPQPAC---------PPPGP 638
Query: 64 APHPRRPAG-----SPPALADRE---GRRSLVPQTSIQGQN 96
APHP P G +PP +A +SLVP + G +
Sbjct: 639 APHPTGPPGPIPVPAPPQIATSTSLLAAQSLVPPPGLPGSS 679
>gi|209529736 mitogen-activated protein kinase 7 isoform 1 [Homo
sapiens]
Length = 816
Score = 39.7 bits (91), Expect = 9e-04
Identities = 32/101 (31%), Positives = 40/101 (39%), Gaps = 18/101 (17%)
Query: 4 PRPAPRRASRARRGLAPWDGAGAGAVTGPCPAAAQGARGSWPSPRCLPSDGGAREAPPTS 63
P PAP + +P G A TGP P +A G P P C PP
Sbjct: 589 PAPAPTPTPTPVQPTSPPPGPVAQP-TGPQPQSAGSTSGPVPQPAC---------PPPGP 638
Query: 64 APHPRRPAG-----SPPALADRE---GRRSLVPQTSIQGQN 96
APHP P G +PP +A +SLVP + G +
Sbjct: 639 APHPTGPPGPIPVPAPPQIATSTSLLAAQSLVPPPGLPGSS 679
>gi|209529734 mitogen-activated protein kinase 7 isoform 1 [Homo
sapiens]
Length = 816
Score = 39.7 bits (91), Expect = 9e-04
Identities = 32/101 (31%), Positives = 40/101 (39%), Gaps = 18/101 (17%)
Query: 4 PRPAPRRASRARRGLAPWDGAGAGAVTGPCPAAAQGARGSWPSPRCLPSDGGAREAPPTS 63
P PAP + +P G A TGP P +A G P P C PP
Sbjct: 589 PAPAPTPTPTPVQPTSPPPGPVAQP-TGPQPQSAGSTSGPVPQPAC---------PPPGP 638
Query: 64 APHPRRPAG-----SPPALADRE---GRRSLVPQTSIQGQN 96
APHP P G +PP +A +SLVP + G +
Sbjct: 639 APHPTGPPGPIPVPAPPQIATSTSLLAAQSLVPPPGLPGSS 679
>gi|20986499 mitogen-activated protein kinase 7 isoform 2 [Homo
sapiens]
Length = 677
Score = 39.7 bits (91), Expect = 9e-04
Identities = 32/101 (31%), Positives = 40/101 (39%), Gaps = 18/101 (17%)
Query: 4 PRPAPRRASRARRGLAPWDGAGAGAVTGPCPAAAQGARGSWPSPRCLPSDGGAREAPPTS 63
P PAP + +P G A TGP P +A G P P C PP
Sbjct: 450 PAPAPTPTPTPVQPTSPPPGPVAQP-TGPQPQSAGSTSGPVPQPAC---------PPPGP 499
Query: 64 APHPRRPAG-----SPPALADRE---GRRSLVPQTSIQGQN 96
APHP P G +PP +A +SLVP + G +
Sbjct: 500 APHPTGPPGPIPVPAPPQIATSTSLLAAQSLVPPPGLPGSS 540
>gi|45935385 SAM and SH3 domain containing 1 [Homo sapiens]
Length = 1247
Score = 39.3 bits (90), Expect = 0.001
Identities = 32/93 (34%), Positives = 38/93 (40%), Gaps = 8/93 (8%)
Query: 3 PPRPAPRRASRARRGLAPWDGAGAGAVTGPCPAAAQGARGSWPSPRCLPSDGGAREAPPT 62
PP PA + R GL P +GA+ P RGS SP PSD PP
Sbjct: 985 PPVPAKKSRERLANGLHPVPMGPSGALPSPDAPCLPVKRGSPASPTS-PSD-----CPPA 1038
Query: 63 SAPHP--RRPAGSPPALADREGRRSLVPQTSIQ 93
AP P + GSPP+ L TS+Q
Sbjct: 1039 LAPRPLSGQAPGSPPSTRPPPWLSELPENTSLQ 1071
>gi|62945417 dystrophia myotonica-containing WD repeat motif
protein [Homo sapiens]
Length = 674
Score = 39.3 bits (90), Expect = 0.001
Identities = 25/71 (35%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Query: 23 GAGAGAVTGPCPAAAQGARGSWPSPRCLPSDGGAREAPPTSA--PHPRRPAGSPPALADR 80
G+G GA G C R + LP DG AR + P SA P P +P PP A
Sbjct: 9 GSGPGAAMGDCAEIKSQFRTREGFYKLLPGDGAARRSGPASAQTPVPPQPPQPPPGPASA 68
Query: 81 EGRRSLVPQTS 91
G + P +S
Sbjct: 69 SGPGAAGPASS 79
Score = 26.2 bits (56), Expect = 9.9
Identities = 24/74 (32%), Positives = 28/74 (37%), Gaps = 14/74 (18%)
Query: 31 GPCPAAAQGARGSWPSPRCLPSDGGAREAPPTSAPHPR--RPAGSPPALADREGRRSLVP 88
G P AA +RG P P LP + S PHP AG P A+ P
Sbjct: 467 GTTPPAASSSRGGEPGPGPLPRS----LSRSNSLPHPAGGGKAGGPGVAAE--------P 514
Query: 89 QTSIQGQNFAQLSL 102
T FA L+L
Sbjct: 515 GTPFSIGRFATLTL 528
>gi|122692281 hypothetical protein LOC645369 [Homo sapiens]
Length = 621
Score = 38.9 bits (89), Expect = 0.001
Identities = 28/64 (43%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 18 LAPWDGAGAGAVTGPCPAAAQGARGSWPSPRCLPSDGGAREA--PPTSAPHPRRPAGSPP 75
L P G+G G AAA A+GSWP PS G R A PP A PR P PP
Sbjct: 261 LKPGGCGGSGDAFG---AAAMLAKGSWPPHPAAPSGGRPRGAASPPDLASSPRCPR-EPP 316
Query: 76 ALAD 79
+LA+
Sbjct: 317 SLAE 320
>gi|239753673 PREDICTED: hypothetical protein [Homo sapiens]
Length = 380
Score = 38.5 bits (88), Expect = 0.002
Identities = 38/114 (33%), Positives = 50/114 (43%), Gaps = 23/114 (20%)
Query: 6 PAPRRASRARRGLAPWDGAGAGAVTGP---CPAAAQGARGSWPS-PRCLPSDGGAREAPP 61
PAPR+A++A A TGP P A + A G+ S PR L R A P
Sbjct: 159 PAPRQAAQA-------------ADTGPRHASPGARRPAPGARRSRPRLL------RPASP 199
Query: 62 TSAPHPRRPAGSPPALADREGRRSLVPQTSIQGQNFAQLSLARPWAGKRGHRQR 115
P PRR + +P R GR Q + G A+L L G+R HR++
Sbjct: 200 PPRPAPRRRSTAPRHEGGRPGRGRTRRQPHLAGAGCARLELEGARMGERLHRRQ 253
Score = 30.4 bits (67), Expect = 0.53
Identities = 48/145 (33%), Positives = 51/145 (35%), Gaps = 41/145 (28%)
Query: 3 PPRPAPRRASRARR--GLAPWDG--------AGAGAVTGPCPAAAQG----ARGSWPSPR 48
PPRPAPRR S A R G P G AGAG A G R P
Sbjct: 200 PPRPAPRRRSTAPRHEGGRPGRGRTRRQPHLAGAGCARLELEGARMGERLHRRQGAPETA 259
Query: 49 CL----PSDGGAREAPP-------------TSAPHPRRPAG-SPPALADREGRRSLVPQT 90
C+ A E P A P AG SPPA GR S+ P+
Sbjct: 260 CIHLQVSISKNASELNPKFPQCHLINGPGFAEAKGPMVAAGSSPPA-----GRFSMWPR- 313
Query: 91 SIQGQNFAQLSLARPWAGKRGHRQR 115
Q L A P G RGHR R
Sbjct: 314 --DAQRLLHLCQAAP-HGLRGHRGR 335
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 38.5 bits (88), Expect = 0.002
Identities = 32/80 (40%), Positives = 35/80 (43%), Gaps = 6/80 (7%)
Query: 3 PPRPAPRRASRARRGLAPWDGAGAGAVTGPCPAAAQ-GARGSWPSPRCLPSDGGAREAPP 61
PP PAP A+ R AP A A A P P AQ G R +P P A APP
Sbjct: 134 PPPPAPVAAAAPAR--AP-RAAAAAATAPPSPGPAQPGPRAQRAAPLAAPPPAPA--APP 188
Query: 62 TSAPHPRRPAGSPPALADRE 81
AP PPA+A RE
Sbjct: 189 AVAPPAGPRRAPPPAVAARE 208
Score = 26.2 bits (56), Expect = 9.9
Identities = 20/68 (29%), Positives = 22/68 (32%), Gaps = 6/68 (8%)
Query: 3 PPRPAPRRASRARRGLAPWDGAGAGAVTGPCPAAAQGARGSWPSPRCLPSDGGAREAPPT 62
PP P P + + AP A P PAA R P ARE P
Sbjct: 159 PPSPGPAQPGPRAQRAAPL------AAPPPAPAAPPAVAPPAGPRRAPPPAVAAREPPLP 212
Query: 63 SAPHPRRP 70
P P P
Sbjct: 213 PPPQPPAP 220
>gi|239756693 PREDICTED: similar to coiled-coil domain containing 92
[Homo sapiens]
Length = 272
Score = 38.1 bits (87), Expect = 0.003
Identities = 29/71 (40%), Positives = 31/71 (43%), Gaps = 14/71 (19%)
Query: 4 PRPAPRRASRARRGLAPWDGAGAGAVT-----GPC------PAAAQGARGSWPSPRCLPS 52
PRP P RA A+R P GA VT GP P A G+ GS PS R
Sbjct: 156 PRPGPARAQPAQRARGPGVGARLAGVTRDGRGGPARDAARSPQAGPGSEGSRPSSR---K 212
Query: 53 DGGAREAPPTS 63
G A APP S
Sbjct: 213 RGEAAPAPPKS 223
>gi|239749482 PREDICTED: hypothetical protein [Homo sapiens]
Length = 195
Score = 38.1 bits (87), Expect = 0.003
Identities = 42/143 (29%), Positives = 57/143 (39%), Gaps = 33/143 (23%)
Query: 5 RPAPRR-----ASRARRGLAPWDGAGAGAVTGPCPAAAQGARGSWPSPRCLPSDGGAREA 59
RPA R A++ RR G G G + P P A Q PR P A A
Sbjct: 63 RPAAARLSALAAAQPRRRSPGPQGGGGGDIASPLPPALQ--------PRGAP----AVPA 110
Query: 60 PPTSAPHPRRPAGSPPALADREG-RRSLVPQTSI------------QGQNFAQLSLARPW 106
P+ P P RP+ PP + G R ++P +++ QG A+ RP
Sbjct: 111 APSPGPLPARPSSPPPRPSLPSGPHRPVLPPSALAAPRPPLARPLPQGSVTAREQEQRP- 169
Query: 107 AGKRGHRQREPEALRALRAGQEL 129
+ R PEAL + AG +L
Sbjct: 170 --RSRRRAGAPEALGPVHAGSDL 190
>gi|110556644 zinc finger protein, multitype 1 [Homo sapiens]
Length = 1006
Score = 38.1 bits (87), Expect = 0.003
Identities = 31/87 (35%), Positives = 39/87 (44%), Gaps = 10/87 (11%)
Query: 3 PPRPAPRRASRARRGLAPWDGAGAGAVT------GPCPAAAQGARGSWPSPRCLP--SDG 54
PP P+P R RR ++ AGA P P + + GS P P S G
Sbjct: 729 PPAPSPAAPVRTRRRRKLYELHAAGAPPPPPPGHAPAPESPRPGSGSGSGPGLAPARSPG 788
Query: 55 GAREAPPTSAPHPRRP-AGSP-PALAD 79
A + P + PRRP G+P PALAD
Sbjct: 789 PAADGPIDLSKKPRRPLPGAPAPALAD 815
Score = 27.3 bits (59), Expect = 4.4
Identities = 33/100 (33%), Positives = 38/100 (38%), Gaps = 24/100 (24%)
Query: 2 CPPRPAPR----RASRARRGL---APWDGAGAGAVT----GPCPAAAQGARGSWPSPRCL 50
CPP R R GL AP G G A T GP PA A A P P
Sbjct: 859 CPPNGPVRGDLLEHFRLAHGLLLGAPLAGPGVEARTPADRGPSPAPAPAAS---PQPGSR 915
Query: 51 -PSDG---GAREAPPTSAPHPRR------PAGSPPALADR 80
P DG +E PP P P P +PP+ +D+
Sbjct: 916 GPRDGLGPEPQEPPPGPPPSPAAAPEAVPPPPAPPSYSDK 955
Score = 26.9 bits (58), Expect = 5.8
Identities = 26/72 (36%), Positives = 29/72 (40%), Gaps = 13/72 (18%)
Query: 2 CPPRPAPRRASRARRGLAPWDGAGAGAVTGPCPAAAQGARGSWP-SPRCLPSDGGAREAP 60
C R AP A ARR AP P PA A + + P +PR P GARE
Sbjct: 600 CSGRRAPEDAPAARRPKAP-----------PGPARAPPGQPAEPDAPRSSPGP-GAREEG 647
Query: 61 PTSAPHPRRPAG 72
A P AG
Sbjct: 648 AGGAATPEDGAG 659
>gi|169211438 PREDICTED: hypothetical protein [Homo sapiens]
Length = 200
Score = 37.4 bits (85), Expect = 0.004
Identities = 28/78 (35%), Positives = 32/78 (41%), Gaps = 17/78 (21%)
Query: 2 CPPRPAPRRASRARRGLAPWDGAGAGAVTG-----PCPAAAQGARGSWPSPRCLPSDGGA 56
C RP+P A R R G W AG GA+ G PC A A + P C
Sbjct: 80 CASRPSPSSALRVRAG---W--AGRGAIAGSPSLRPCDLGATEATRARPRIGC------- 127
Query: 57 REAPPTSAPHPRRPAGSP 74
PP +AP PR G P
Sbjct: 128 HSQPPRAAPKPRACPGFP 145
>gi|169211910 PREDICTED: hypothetical protein [Homo sapiens]
Length = 200
Score = 37.4 bits (85), Expect = 0.004
Identities = 28/78 (35%), Positives = 32/78 (41%), Gaps = 17/78 (21%)
Query: 2 CPPRPAPRRASRARRGLAPWDGAGAGAVTG-----PCPAAAQGARGSWPSPRCLPSDGGA 56
C RP+P A R R G W AG GA+ G PC A A + P C
Sbjct: 80 CASRPSPSSALRVRAG---W--AGRGAIAGSPSLRPCDLGATEATRARPRIGC------- 127
Query: 57 REAPPTSAPHPRRPAGSP 74
PP +AP PR G P
Sbjct: 128 HSQPPRAAPKPRACPGFP 145
>gi|169211055 PREDICTED: hypothetical protein [Homo sapiens]
Length = 200
Score = 37.4 bits (85), Expect = 0.004
Identities = 28/78 (35%), Positives = 32/78 (41%), Gaps = 17/78 (21%)
Query: 2 CPPRPAPRRASRARRGLAPWDGAGAGAVTG-----PCPAAAQGARGSWPSPRCLPSDGGA 56
C RP+P A R R G W AG GA+ G PC A A + P C
Sbjct: 80 CASRPSPSSALRVRAG---W--AGRGAIAGSPSLRPCDLGATEATRARPRIGC------- 127
Query: 57 REAPPTSAPHPRRPAGSP 74
PP +AP PR G P
Sbjct: 128 HSQPPRAAPKPRACPGFP 145
>gi|239745068 PREDICTED: similar to hCG2042704 [Homo sapiens]
Length = 618
Score = 37.4 bits (85), Expect = 0.004
Identities = 33/104 (31%), Positives = 45/104 (43%), Gaps = 3/104 (2%)
Query: 10 RASRARRGLAPWDGAGAGAVTGPCPAAAQGARGSWPSPRCLPSDGGAREAPPTSAPHPRR 69
R S++ R W A G PA +R R PS A P+S P P
Sbjct: 15 RLSQSAREGGGWARPARAARRGGHPAHFCWSRPPVSRERDDPSAPRPVPALPSS-PSPPP 73
Query: 70 PAGSPPALADREGRRSLVPQTSIQGQNFAQLSLARPWAGKRGHR 113
P P A +++GR+ VP S++ A L L RP+ G+ HR
Sbjct: 74 PVRRPSAAREQQGRQ--VPAGSLRDCRLASLPLQRPFRGRGPHR 115
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 37.4 bits (85), Expect = 0.004
Identities = 42/131 (32%), Positives = 47/131 (35%), Gaps = 10/131 (7%)
Query: 3 PPRPAPRRASRARRGLA---PWDGAGAGAVTGPCPAAAQGARGSWPSPRCLPSDGGAREA 59
PP P + +GL P G G TGP G R P PR LP+ GA
Sbjct: 4241 PPYQEPGTQTSPLQGLLGCQPQLGGFPGPQTGPLQELGAGPRPQGP-PR-LPAPPGALST 4298
Query: 60 PPTSAP-HPRRPAGSPPALADREGRRSLVPQTSIQGQNFAQLSLARPWAGKRGHRQREPE 118
P P HP P SP R S +P S Q AQL P K EP
Sbjct: 4299 GPVLGPVHPTPPPSSP----QEPKRPSQLPSPSSQLPTEAQLPPTHPGTPKPQGPTLEPP 4354
Query: 119 ALRALRAGQEL 129
R A +L
Sbjct: 4355 PGRVSPAAAQL 4365
>gi|150170729 microtubule associated serine/threonine kinase 3 [Homo
sapiens]
Length = 1309
Score = 37.4 bits (85), Expect = 0.004
Identities = 42/124 (33%), Positives = 50/124 (40%), Gaps = 21/124 (16%)
Query: 3 PPRPAPRRASRARRGLA----PWDGAGAGAVTGPCPAAAQGARGSWPSPRCLPSDGGARE 58
PP +P +S A A P G A GP P G R S S +P A
Sbjct: 1137 PPSASPSSSSPASPAAAGHTRPSSLHGLAAKLGP-PRPKTGRRKSTSS---IPPSPLA-- 1190
Query: 59 APPTSAPHPRRPA---GSPPALADREGRRSLVPQTSIQGQNFAQLSLARPWAGKRGHRQR 115
PP SAP PR P+ G PPA A R +GQ+ +L G+ G R R
Sbjct: 1191 CPPISAPPPRSPSPLPGHPPAPARSPRLR--------RGQSADKLGTGERLDGEAGRRTR 1242
Query: 116 EPEA 119
PEA
Sbjct: 1243 GPEA 1246
Score = 26.9 bits (58), Expect = 5.8
Identities = 25/97 (25%), Positives = 40/97 (41%), Gaps = 21/97 (21%)
Query: 3 PPRPAPRRASRARRGLAPWDGAGAGAVTGPCPAAAQ---------------GARGSWPSP 47
P PAP ++ + G G+G G+ G P +A G S SP
Sbjct: 869 PRDPAPEKSRASSSG-----GSGGGS-GGRVPKSASVSALSLIITADDGSGGPLMSPLSP 922
Query: 48 RCLPSDGGAREAPPTSAPHPRRPAGSPPALADREGRR 84
R L S+ +R++ P+ P P + PP + G++
Sbjct: 923 RSLSSNPSSRDSSPSRDPSPVCGSLRPPIVIHSSGKK 959
>gi|239743620 PREDICTED: hypothetical protein [Homo sapiens]
Length = 285
Score = 37.0 bits (84), Expect = 0.006
Identities = 43/161 (26%), Positives = 62/161 (38%), Gaps = 40/161 (24%)
Query: 5 RPAPRR-----ASRARRGLAPWDGAGAGAVTGPCPAAAQGARGSWPSPRCLPSDGGAREA 59
RPA R A++ RR G G G + P P A Q PR P A A
Sbjct: 63 RPAAARLSALAAAQPRRRSPGPQGGGGGDIASPLPPALQ--------PRGAP----AVPA 110
Query: 60 PPTSAPHPRRPAGSPPALADREG-RRSLVPQTSI------------QGQNFAQLSLARPW 106
P+ P P RP+ PP + G R ++P +++ QG A+ RP
Sbjct: 111 APSPGPLPARPSSPPPRPSLPSGPHRPVLPPSALAAPRPPLARPLPQGSVTAREQEQRP- 169
Query: 107 AGKRGHRQREPEAL-------RALRAGQELWNLSDDILILL 140
+ R PEAL + ++ WN +L+L+
Sbjct: 170 --RSRRRAGAPEALGPALTRIHNVEGSKDSWNCGQGLLLLM 208
>gi|169169586 PREDICTED: hypothetical protein [Homo sapiens]
Length = 251
Score = 37.0 bits (84), Expect = 0.006
Identities = 39/134 (29%), Positives = 44/134 (32%), Gaps = 21/134 (15%)
Query: 1 MCPPRPAPRRASRARRGLAPWDGAGAGAVTGPCPAAAQGARGSWPSPRCLPSDGGAREAP 60
+C PRPAP RA AGAV P PAAA AR + P G
Sbjct: 43 LCAPRPAPGRAQS--------PVPAAGAVPSP-PAAAHPARPALRGETPAPGRRGRATTR 93
Query: 61 PTSAPHPRRPAGSPPALADREGR------------RSLVPQTSIQGQNFAQLSLARPWAG 108
P R P P GR R L P + + P AG
Sbjct: 94 GEVQPSVRPPLSHRPLRGGGMGRGRPGKGPPPNPSRRLPPAPPGGRRTWLSALATGPAAG 153
Query: 109 KRGHRQREPEALRA 122
G R+R P RA
Sbjct: 154 GAGRRRRSPPVFRA 167
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 37.0 bits (84), Expect = 0.006
Identities = 28/76 (36%), Positives = 33/76 (43%), Gaps = 10/76 (13%)
Query: 3 PPRPAPRRASRARRGLAPWDGAGAGAVTGPCPAAAQGARGSWPSPRCLPSDGGAREAPPT 62
P RP R + R R A GA V +A R + PRC P ARE P
Sbjct: 2388 PERPGTRVSERLRGARAETQGANHTPVI-----SAHQTRSTTTPPRCSP----ARERVPR 2438
Query: 63 SAPHPR-RPAGSPPAL 77
AP PR PA +P A+
Sbjct: 2439 PAPRPRPTPASAPAAI 2454
>gi|118766337 zinc finger protein of the cerebellum 5 [Homo sapiens]
Length = 663
Score = 37.0 bits (84), Expect = 0.006
Identities = 29/77 (37%), Positives = 35/77 (45%), Gaps = 13/77 (16%)
Query: 3 PPRP-APRRASRARRGLAPWDGAGAGAVTGPCPAAAQGARGSWPSPRCLPSDGGAREAPP 61
P P AP A+RA L GAG+ PC + GA+ S P P P PP
Sbjct: 112 PAHPEAPAAAARAA-ALVAHPGAGSY----PCGGGSSGAQPSAPPPPAPP-------LPP 159
Query: 62 TSAPHPRRPAGSPPALA 78
T +P P P PPAL+
Sbjct: 160 TPSPPPPPPPPPPPALS 176
>gi|194272140 dendrin [Homo sapiens]
Length = 711
Score = 36.6 bits (83), Expect = 0.007
Identities = 36/120 (30%), Positives = 48/120 (40%), Gaps = 13/120 (10%)
Query: 4 PRPAPRR--ASRARRGLAPWDGAGAGAVTG---PCPAAAQGARGSWPSPRCLPSDGGARE 58
P+P PRR ASR + W V AA R + + R GGAR
Sbjct: 78 PQPPPRRPWASRVLQEATNWRAGPLAEVRAREQEKRKAASQEREAKETERKRRKAGGARR 137
Query: 59 APP-------TSAPHPRRPAGSP-PALADREGRRSLVPQTSIQGQNFAQLSLARPWAGKR 110
+PP +AP + AG P P +R P+ S Q Q+ + A PW G+R
Sbjct: 138 SPPGRPRPEPRNAPRVAQLAGLPAPLRPERLAPVGRAPRPSAQPQSDPGSAWAGPWGGRR 197
>gi|222352122 hypothetical protein LOC284297 [Homo sapiens]
Length = 1573
Score = 36.2 bits (82), Expect = 0.010
Identities = 26/83 (31%), Positives = 32/83 (38%), Gaps = 6/83 (7%)
Query: 18 LAPWDGAGAGAVTGPCPAA-AQGARGS----WPSPRCLPSDGGAREAPPTSAPHPRRPAG 72
L P GAG G P G GS WP R P R APPT +P P G
Sbjct: 958 LGPTLGAGTTRSPGSPPTLRVHGDTGSPRKPWPERRP-PRPAATRTAPPTPSPGPSASPG 1016
Query: 73 SPPALADREGRRSLVPQTSIQGQ 95
P + R L P +++ +
Sbjct: 1017 PPGPALTSDSSRELTPHSALTSE 1039
Score = 27.7 bits (60), Expect = 3.4
Identities = 22/75 (29%), Positives = 27/75 (36%), Gaps = 6/75 (8%)
Query: 3 PPRPAPRRASRARRGLAPWDGAGAGAVTGPCPAAAQGARGSWPSPRCLPSDGGAREAPPT 62
PPRPA A R P G A GP A +P + +AP T
Sbjct: 994 PPRPA------ATRTAPPTPSPGPSASPGPPGPALTSDSSRELTPHSALTSEATSDAPDT 1047
Query: 63 SAPHPRRPAGSPPAL 77
S P P + + P L
Sbjct: 1048 SPPTPDPASRTNPDL 1062
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.134 0.437
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,512,873
Number of Sequences: 37866
Number of extensions: 475188
Number of successful extensions: 5389
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 218
Number of HSP's successfully gapped in prelim test: 766
Number of HSP's that attempted gapping in prelim test: 4151
Number of HSP's gapped (non-prelim): 1835
length of query: 143
length of database: 18,247,518
effective HSP length: 92
effective length of query: 51
effective length of database: 14,763,846
effective search space: 752956146
effective search space used: 752956146
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.