NGDN 829

Name: NGDN	Sequence: fasta or formatted (311aa)		NCBI GI: 111038133
Description: neuroguidin isoform 2		Referenced in: Translation Factors
Other entries for this name: alt prot [315aa] neuroguidin isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.1 19 2 C cysteine 0.0 0 0 D aspartate 6.1 19 2 E glutamate 9.0 28 3 F phenylalanine 1.0 3 1 G glycine 4.5 14 2 H histidine 3.2 10 1 I isoleucine 3.2 10 1 K lysine 10.6 33 3 L leucine 11.6 36 3 M methionine 2.9 9 2 N asparagine 1.9 6 1 P proline 4.2 13 2 Q glutamine 5.8 18 1 R arginine 7.1 22 2 S serine 9.3 29 3 T threonine 4.2 13 1 V valine 7.1 22 1 W tryptophan 0.0 0 0 Y tyrosine 2.3 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 neuroguidin isoform 2 NGDN 0.997 neuroguidin isoform 1 UTP3 0.062 UTP3, small subunit processome component CALD1 0.033 caldesmon 1 isoform 1 RNF20 0.029 ring finger protein 20 LOC100294088 0.029 PREDICTED: hypothetical protein, partial TNIP1 0.028 TNFAIP3 interacting protein 1 EIF5B 0.028 eukaryotic translation initiation factor 5B TCHH 0.026 trichohyalin SFRS12 0.026 splicing factor, arginine/serine-rich 12 isoform a ... SFRS12 0.026 splicing factor, arginine/serine-rich 12 isoform b [... RIMS1 0.024 regulating synaptic membrane exocytosis 1 ACIN1 0.023 apoptotic chromatin condensation inducer 1 TPR 0.023 nuclear pore complex-associated protein TPR WDR87 0.023 NYD-SP11 protein TNIK 0.023 TRAF2 and NCK interacting kinase isoform 8 TNIK 0.023 TRAF2 and NCK interacting kinase isoform 7 TNIK 0.023 TRAF2 and NCK interacting kinase isoform 6 TNIK 0.023 TRAF2 and NCK interacting kinase isoform 5 TNIK 0.023 TRAF2 and NCK interacting kinase isoform 4 TNIK 0.023 TRAF2 and NCK interacting kinase isoform 3 TNIK 0.023 TRAF2 and NCK interacting kinase isoform 2 TNIK 0.023 TRAF2 and NCK interacting kinase isoform 1 PCDH15 0.021 protocadherin 15 isoform CD2-1 precursor LOC100133599 0.021 PREDICTED: hypothetical protein NKAPL 0.021 NFKB activating protein-like MYH13 0.021 myosin, heavy polypeptide 13, skeletal muscle [Homo... LOC402160 0.019 PREDICTED: similar to hCG18094 LOC402160 0.019 PREDICTED: similar to hCG18094 LOC402160 0.019 PREDICTED: similar to hCG18094 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.