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Search of human proteins with 169171887
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169171887 PREDICTED: hypothetical protein LOC154860 [Homo
sapiens]
(137 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169171887 PREDICTED: hypothetical protein LOC154860 [Homo sap... 286 5e-78
gi|169171120 PREDICTED: hypothetical protein LOC154860 [Homo sap... 286 5e-78
gi|169170630 PREDICTED: hypothetical protein LOC154860 [Homo sap... 286 5e-78
gi|154813204 inhibin beta B subunit preproprotein [Homo sapiens] 31 0.36
gi|21618325 forkhead box E1 [Homo sapiens] 30 0.81
gi|239753274 PREDICTED: hypothetical protein [Homo sapiens] 29 1.4
gi|239747844 PREDICTED: hypothetical protein XP_002346445 [Homo ... 29 1.4
gi|239742747 PREDICTED: hypothetical protein XP_002342617 [Homo ... 29 1.4
gi|154813197 talpid3 protein [Homo sapiens] 29 1.4
gi|190886454 tumor specificity and mitosis phase-dependent expre... 29 1.4
gi|47717125 intersectin 1 isoform ITSN-s [Homo sapiens] 28 1.8
gi|47717123 intersectin 1 isoform ITSN-l [Homo sapiens] 28 1.8
gi|163965377 putative thiosulfate sulfurtransferase KAT isoform ... 28 1.8
gi|163965371 putative thiosulfate sulfurtransferase KAT isoform ... 28 1.8
gi|210032509 hypothetical protein LOC100130302 [Homo sapiens] 28 1.8
gi|15812178 zinc finger protein 36, C3H type-like 2 [Homo sapiens] 28 2.4
gi|21703346 spartin [Homo sapiens] 28 3.1
gi|214830187 spartin [Homo sapiens] 28 3.1
gi|214830109 spartin [Homo sapiens] 28 3.1
gi|214830079 spartin [Homo sapiens] 28 3.1
gi|38016911 stomatin isoform a [Homo sapiens] 28 3.1
gi|54792133 hypothetical protein LOC25854 [Homo sapiens] 27 4.0
gi|54792131 hypothetical protein LOC25854 [Homo sapiens] 27 4.0
gi|164698498 septin 9 isoform b [Homo sapiens] 27 5.3
gi|164698494 septin 9 isoform a [Homo sapiens] 27 5.3
gi|116256489 septin 9 isoform c [Homo sapiens] 27 5.3
gi|45592959 LIM domain binding 3 isoform 1 [Homo sapiens] 27 5.3
gi|125987596 sodium bicarbonate transporter 4 isoform a [Homo sa... 27 5.3
gi|19743827 sodium bicarbonate transporter 4 isoform c [Homo sap... 27 5.3
gi|73760403 Kruppel-like factor 10 isoform b [Homo sapiens] 27 5.3
>gi|169171887 PREDICTED: hypothetical protein LOC154860 [Homo
sapiens]
Length = 137
Score = 286 bits (731), Expect = 5e-78
Identities = 137/137 (100%), Positives = 137/137 (100%)
Query: 1 MPSGEGKQSVLIPTPVAGVCKPPLSSAGGSLDVCAHQGDLPAPELCPQVHLCLPKSARRD 60
MPSGEGKQSVLIPTPVAGVCKPPLSSAGGSLDVCAHQGDLPAPELCPQVHLCLPKSARRD
Sbjct: 1 MPSGEGKQSVLIPTPVAGVCKPPLSSAGGSLDVCAHQGDLPAPELCPQVHLCLPKSARRD 60
Query: 61 HFPCNAPQPNTRRVWHLGRNSWGGAVERVEVSGKTPTAAAPTVRAPAAQARASRSALEAA 120
HFPCNAPQPNTRRVWHLGRNSWGGAVERVEVSGKTPTAAAPTVRAPAAQARASRSALEAA
Sbjct: 61 HFPCNAPQPNTRRVWHLGRNSWGGAVERVEVSGKTPTAAAPTVRAPAAQARASRSALEAA 120
Query: 121 ARTFPGAVSCQPAITQS 137
ARTFPGAVSCQPAITQS
Sbjct: 121 ARTFPGAVSCQPAITQS 137
>gi|169171120 PREDICTED: hypothetical protein LOC154860 [Homo
sapiens]
Length = 137
Score = 286 bits (731), Expect = 5e-78
Identities = 137/137 (100%), Positives = 137/137 (100%)
Query: 1 MPSGEGKQSVLIPTPVAGVCKPPLSSAGGSLDVCAHQGDLPAPELCPQVHLCLPKSARRD 60
MPSGEGKQSVLIPTPVAGVCKPPLSSAGGSLDVCAHQGDLPAPELCPQVHLCLPKSARRD
Sbjct: 1 MPSGEGKQSVLIPTPVAGVCKPPLSSAGGSLDVCAHQGDLPAPELCPQVHLCLPKSARRD 60
Query: 61 HFPCNAPQPNTRRVWHLGRNSWGGAVERVEVSGKTPTAAAPTVRAPAAQARASRSALEAA 120
HFPCNAPQPNTRRVWHLGRNSWGGAVERVEVSGKTPTAAAPTVRAPAAQARASRSALEAA
Sbjct: 61 HFPCNAPQPNTRRVWHLGRNSWGGAVERVEVSGKTPTAAAPTVRAPAAQARASRSALEAA 120
Query: 121 ARTFPGAVSCQPAITQS 137
ARTFPGAVSCQPAITQS
Sbjct: 121 ARTFPGAVSCQPAITQS 137
>gi|169170630 PREDICTED: hypothetical protein LOC154860 [Homo
sapiens]
Length = 137
Score = 286 bits (731), Expect = 5e-78
Identities = 137/137 (100%), Positives = 137/137 (100%)
Query: 1 MPSGEGKQSVLIPTPVAGVCKPPLSSAGGSLDVCAHQGDLPAPELCPQVHLCLPKSARRD 60
MPSGEGKQSVLIPTPVAGVCKPPLSSAGGSLDVCAHQGDLPAPELCPQVHLCLPKSARRD
Sbjct: 1 MPSGEGKQSVLIPTPVAGVCKPPLSSAGGSLDVCAHQGDLPAPELCPQVHLCLPKSARRD 60
Query: 61 HFPCNAPQPNTRRVWHLGRNSWGGAVERVEVSGKTPTAAAPTVRAPAAQARASRSALEAA 120
HFPCNAPQPNTRRVWHLGRNSWGGAVERVEVSGKTPTAAAPTVRAPAAQARASRSALEAA
Sbjct: 61 HFPCNAPQPNTRRVWHLGRNSWGGAVERVEVSGKTPTAAAPTVRAPAAQARASRSALEAA 120
Query: 121 ARTFPGAVSCQPAITQS 137
ARTFPGAVSCQPAITQS
Sbjct: 121 ARTFPGAVSCQPAITQS 137
>gi|154813204 inhibin beta B subunit preproprotein [Homo sapiens]
Length = 407
Score = 30.8 bits (68), Expect = 0.36
Identities = 15/32 (46%), Positives = 15/32 (46%)
Query: 13 PTPVAGVCKPPLSSAGGSLDVCAHQGDLPAPE 44
PTP A PP S GGS D C G PE
Sbjct: 34 PTPAAPPPPPPPGSPGGSQDTCTSCGGFRRPE 65
>gi|21618325 forkhead box E1 [Homo sapiens]
Length = 373
Score = 29.6 bits (65), Expect = 0.81
Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 5/71 (7%)
Query: 63 PCNAPQPNTRRVWHLGRNSW-----GGAVERVEVSGKTPTAAAPTVRAPAAQARASRSAL 117
P A +P W L N+ G + R + ++ + P AA A A+ +A
Sbjct: 115 PREAGRPGKGNYWALDPNAEDMFESGSFLRRRKRFKRSDLSTYPAYMHDAAAAAAAAAAA 174
Query: 118 EAAARTFPGAV 128
AAA FPGAV
Sbjct: 175 AAAAAIFPGAV 185
>gi|239753274 PREDICTED: hypothetical protein [Homo sapiens]
Length = 263
Score = 28.9 bits (63), Expect = 1.4
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 6/41 (14%)
Query: 103 VRAPAAQ------ARASRSALEAAARTFPGAVSCQPAITQS 137
VRA A Q AR +RS+ + A+RT P A C P + S
Sbjct: 76 VRAAAGQVPGEAGARRARSSAQLASRTAPAAPPCAPGLLAS 116
>gi|239747844 PREDICTED: hypothetical protein XP_002346445 [Homo
sapiens]
Length = 263
Score = 28.9 bits (63), Expect = 1.4
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 6/41 (14%)
Query: 103 VRAPAAQ------ARASRSALEAAARTFPGAVSCQPAITQS 137
VRA A Q AR +RS+ + A+RT P A C P + S
Sbjct: 76 VRAAAGQVPGEAGARRARSSAQLASRTAPAAPPCAPGLLAS 116
>gi|239742747 PREDICTED: hypothetical protein XP_002342617 [Homo
sapiens]
Length = 283
Score = 28.9 bits (63), Expect = 1.4
Identities = 17/39 (43%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 94 KTPTAAAPTVRA-PAAQARASRSALEAAARTFPGAVSCQ 131
+ PT A V A PAAQ R AA R PG +CQ
Sbjct: 205 EAPTCARRAVPAVPAAQPRGRAQRAPAARRQVPGGPACQ 243
>gi|154813197 talpid3 protein [Homo sapiens]
Length = 1472
Score = 28.9 bits (63), Expect = 1.4
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 2 PSGEGKQSVLIPTPVAGVCKPPLSSAGGSLDVCAHQG-DLPA 42
PS K+ VL+ TP + C A ++CA +G D+PA
Sbjct: 990 PSSPAKECVLVKTPDSSPCDSDHDMAFPVKEICAEKGDDMPA 1031
>gi|190886454 tumor specificity and mitosis phase-dependent
expression protein [Homo sapiens]
Length = 394
Score = 28.9 bits (63), Expect = 1.4
Identities = 36/119 (30%), Positives = 50/119 (42%), Gaps = 13/119 (10%)
Query: 16 VAGVCKPPLSSAGGSLDVC---AHQGDLPAPELCPQVHLCLPKSARRDHFPCNAPQPNTR 72
VAG+ LS+ GG D A GD P P PQ + P R P P
Sbjct: 88 VAGLRTSLLSADGGPRDPTRAPARPGDQPPPP--PQRLVFAPADEPRTVLE-RKPLPLGV 144
Query: 73 RVWHLGRNSWGGAVERVEVSGKTPTAAAPTVRAPAAQARASRSALEAAARTFPGAVSCQ 131
R G ++ + E++ P AAP PA R+ +ALE ++ GAV+C+
Sbjct: 145 RAPLAGPSAAARSPEQL----CAPAEAAP---CPAEPERSQSAALEPSSSADAGAVACR 196
>gi|47717125 intersectin 1 isoform ITSN-s [Homo sapiens]
Length = 1220
Score = 28.5 bits (62), Expect = 1.8
Identities = 31/112 (27%), Positives = 42/112 (37%), Gaps = 12/112 (10%)
Query: 28 GGSLDVCA------HQGDLPAPELCPQVHLCLPKSARRDHFPCNAPQPNTRRVWHLGRNS 81
GGSLD+ A + D L P AR F PQP ++W L +
Sbjct: 9 GGSLDIWAITVEERAKHDQQFHSLKPISGFITGDQARNFFFQSGLPQPVLAQIWALADMN 68
Query: 82 WGGAVERVEVSGKTPTAAAPTVRAPAAQARASRSALEAAARTFPGAVSCQPA 133
G +++VE S A + Q SAL + P A+S PA
Sbjct: 69 NDGRMDQVEFS------IAMKLIKLKLQGYQLPSALPPVMKQQPVAISSAPA 114
>gi|47717123 intersectin 1 isoform ITSN-l [Homo sapiens]
Length = 1721
Score = 28.5 bits (62), Expect = 1.8
Identities = 31/112 (27%), Positives = 42/112 (37%), Gaps = 12/112 (10%)
Query: 28 GGSLDVCA------HQGDLPAPELCPQVHLCLPKSARRDHFPCNAPQPNTRRVWHLGRNS 81
GGSLD+ A + D L P AR F PQP ++W L +
Sbjct: 9 GGSLDIWAITVEERAKHDQQFHSLKPISGFITGDQARNFFFQSGLPQPVLAQIWALADMN 68
Query: 82 WGGAVERVEVSGKTPTAAAPTVRAPAAQARASRSALEAAARTFPGAVSCQPA 133
G +++VE S A + Q SAL + P A+S PA
Sbjct: 69 NDGRMDQVEFS------IAMKLIKLKLQGYQLPSALPPVMKQQPVAISSAPA 114
>gi|163965377 putative thiosulfate sulfurtransferase KAT isoform 1
[Homo sapiens]
Length = 115
Score = 28.5 bits (62), Expect = 1.8
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 4/38 (10%)
Query: 96 PTAAAPTVRAPAAQARAS----RSALEAAARTFPGAVS 129
PT + P +R+ A RA RS EAAA T PGA++
Sbjct: 5 PTVSLPELRSLLASGRARLFDVRSREEAAAGTIPGALN 42
>gi|163965371 putative thiosulfate sulfurtransferase KAT isoform 3
[Homo sapiens]
Length = 109
Score = 28.5 bits (62), Expect = 1.8
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 4/38 (10%)
Query: 96 PTAAAPTVRAPAAQARAS----RSALEAAARTFPGAVS 129
PT + P +R+ A RA RS EAAA T PGA++
Sbjct: 5 PTVSLPELRSLLASGRARLFDVRSREEAAAGTIPGALN 42
>gi|210032509 hypothetical protein LOC100130302 [Homo sapiens]
Length = 887
Score = 28.5 bits (62), Expect = 1.8
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 67 PQPNTRRVWHLGRNSWGGAVERVEVSG--KTPTAAAPTVRAPAAQARASRSALEAAARTF 124
P P T+ G+ S G + + K P +AA + A AA A A+ +A AAA
Sbjct: 461 PPPRTQLPSSSGKISSGNSFPPQQAGSPLKRPFSAAAAIAAAAAAAAAAAAAAAAAAPAP 520
Query: 125 PGAVSCQPAI 134
A + PA+
Sbjct: 521 ALAAAAAPAL 530
>gi|15812178 zinc finger protein 36, C3H type-like 2 [Homo sapiens]
Length = 494
Score = 28.1 bits (61), Expect = 2.4
Identities = 18/39 (46%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 95 TPTAAAPTVR-APAAQARASRSALEAAARTFPGAVSCQP 132
TP AAAP+ AP R S S L A A P SC P
Sbjct: 38 TPVAAAPSSGFAPGFLRRHSASNLHALAHPAPSPGSCSP 76
>gi|21703346 spartin [Homo sapiens]
Length = 666
Score = 27.7 bits (60), Expect = 3.1
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 81 SWGGAVERVEVSGKTPTAAAPTVRAPAAQARASRS 115
S+ A + EV+G T T +A V APA+ + S+S
Sbjct: 131 SFSSAPQHAEVNGNTSTPSAGAVAAPASLSLPSQS 165
>gi|214830187 spartin [Homo sapiens]
Length = 666
Score = 27.7 bits (60), Expect = 3.1
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 81 SWGGAVERVEVSGKTPTAAAPTVRAPAAQARASRS 115
S+ A + EV+G T T +A V APA+ + S+S
Sbjct: 131 SFSSAPQHAEVNGNTSTPSAGAVAAPASLSLPSQS 165
>gi|214830109 spartin [Homo sapiens]
Length = 666
Score = 27.7 bits (60), Expect = 3.1
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 81 SWGGAVERVEVSGKTPTAAAPTVRAPAAQARASRS 115
S+ A + EV+G T T +A V APA+ + S+S
Sbjct: 131 SFSSAPQHAEVNGNTSTPSAGAVAAPASLSLPSQS 165
>gi|214830079 spartin [Homo sapiens]
Length = 666
Score = 27.7 bits (60), Expect = 3.1
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 81 SWGGAVERVEVSGKTPTAAAPTVRAPAAQARASRS 115
S+ A + EV+G T T +A V APA+ + S+S
Sbjct: 131 SFSSAPQHAEVNGNTSTPSAGAVAAPASLSLPSQS 165
>gi|38016911 stomatin isoform a [Homo sapiens]
Length = 288
Score = 27.7 bits (60), Expect = 3.1
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Query: 80 NSWGGAVERVEVSGKTPTAAAPTVRAPAAQARASRSA 116
++WG VERVE+ K RA AA+A ASR A
Sbjct: 183 DAWGIKVERVEI--KDVKLPVQLQRAMAAEAEASREA 217
>gi|54792133 hypothetical protein LOC25854 [Homo sapiens]
Length = 482
Score = 27.3 bits (59), Expect = 4.0
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 1 MPSGEGKQSVLIPTPVAGVCKPPLSSAGGSLDV 33
+P+ +G Q TP + V +PPLS+ G S ++
Sbjct: 37 LPTDKGVQHFQGSTPASAVHRPPLSACGHSSNI 69
>gi|54792131 hypothetical protein LOC25854 [Homo sapiens]
Length = 482
Score = 27.3 bits (59), Expect = 4.0
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 1 MPSGEGKQSVLIPTPVAGVCKPPLSSAGGSLDV 33
+P+ +G Q TP + V +PPLS+ G S ++
Sbjct: 37 LPTDKGVQHFQGSTPASAVHRPPLSACGHSSNI 69
>gi|164698498 septin 9 isoform b [Homo sapiens]
Length = 579
Score = 26.9 bits (58), Expect = 5.3
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Query: 68 QPNTRRVWHLGRNSWGGAVERVEVSGKTPTAAAPTVRAPAAQARASRSALEAAARTFP 125
+P+ R V L + S ++ RVE+SG P AA P R S +E A P
Sbjct: 65 EPSARHVDSLSQRSPKASLRRVELSG--PKAAEPVSRRTELSIDISSKQVENAGAIGP 120
>gi|164698494 septin 9 isoform a [Homo sapiens]
Length = 586
Score = 26.9 bits (58), Expect = 5.3
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Query: 68 QPNTRRVWHLGRNSWGGAVERVEVSGKTPTAAAPTVRAPAAQARASRSALEAAARTFP 125
+P+ R V L + S ++ RVE+SG P AA P R S +E A P
Sbjct: 72 EPSARHVDSLSQRSPKASLRRVELSG--PKAAEPVSRRTELSIDISSKQVENAGAIGP 127
>gi|116256489 septin 9 isoform c [Homo sapiens]
Length = 568
Score = 26.9 bits (58), Expect = 5.3
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Query: 68 QPNTRRVWHLGRNSWGGAVERVEVSGKTPTAAAPTVRAPAAQARASRSALEAAARTFP 125
+P+ R V L + S ++ RVE+SG P AA P R S +E A P
Sbjct: 54 EPSARHVDSLSQRSPKASLRRVELSG--PKAAEPVSRRTELSIDISSKQVENAGAIGP 109
>gi|45592959 LIM domain binding 3 isoform 1 [Homo sapiens]
Length = 727
Score = 26.9 bits (58), Expect = 5.3
Identities = 11/36 (30%), Positives = 21/36 (58%)
Query: 92 SGKTPTAAAPTVRAPAAQARASRSALEAAARTFPGA 127
S + P AA+P+ +P A+ +A+ +A+ T P +
Sbjct: 320 SAQPPAAASPSAASPPLATAAAHTAIASASTTAPAS 355
>gi|125987596 sodium bicarbonate transporter 4 isoform a [Homo
sapiens]
Length = 1137
Score = 26.9 bits (58), Expect = 5.3
Identities = 23/95 (24%), Positives = 38/95 (40%), Gaps = 15/95 (15%)
Query: 29 GSLDVCAHQGDLPAPELCPQVHLCLPKSARRDHFPCNAPQPNTRRVWHLGRNSWGGAVER 88
G LD H+ P + CP +H+ LP PQ T + HL +++
Sbjct: 11 GKLDHTNHRRRFPDQKECPPIHIGLPVP--------TYPQRKTDQKGHL------SGLQK 56
Query: 89 VEVSGKTPTAAAPTVRAPAAQARASRSALEAAART 123
V G P + P + A + S+++ +RT
Sbjct: 57 VH-WGLRPDQPQQELTGPGSGASSQDSSMDLISRT 90
>gi|19743827 sodium bicarbonate transporter 4 isoform c [Homo
sapiens]
Length = 1121
Score = 26.9 bits (58), Expect = 5.3
Identities = 23/95 (24%), Positives = 38/95 (40%), Gaps = 15/95 (15%)
Query: 29 GSLDVCAHQGDLPAPELCPQVHLCLPKSARRDHFPCNAPQPNTRRVWHLGRNSWGGAVER 88
G LD H+ P + CP +H+ LP PQ T + HL +++
Sbjct: 11 GKLDHTNHRRRFPDQKECPPIHIGLPVP--------TYPQRKTDQKGHL------SGLQK 56
Query: 89 VEVSGKTPTAAAPTVRAPAAQARASRSALEAAART 123
V G P + P + A + S+++ +RT
Sbjct: 57 VH-WGLRPDQPQQELTGPGSGASSQDSSMDLISRT 90
>gi|73760403 Kruppel-like factor 10 isoform b [Homo sapiens]
Length = 469
Score = 26.9 bits (58), Expect = 5.3
Identities = 25/98 (25%), Positives = 40/98 (40%), Gaps = 16/98 (16%)
Query: 5 EGKQSVLIPTPVAGVCKPPLSSAGGS--LDVCAHQGDLP-APELCPQV-------HLCLP 54
+G ++P PV KPP+ S G+ + G P A ++ PQ+ H+C
Sbjct: 303 KGAVMFVVPQPVVQSSKPPVVSPNGTRLSPIAPAPGFSPSAAKVTPQIDSSRIRSHICSH 362
Query: 55 KSARRDHFPCNAPQPNTRRVWHLGRN----SWGGAVER 88
+ +F + + +TR H G SW G R
Sbjct: 363 PGCGKTYFKSSHLKAHTRT--HTGEKPFSCSWKGCERR 398
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.129 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,597,609
Number of Sequences: 37866
Number of extensions: 346488
Number of successful extensions: 1305
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 48
Number of HSP's that attempted gapping in prelim test: 1251
Number of HSP's gapped (non-prelim): 104
length of query: 137
length of database: 18,247,518
effective HSP length: 91
effective length of query: 46
effective length of database: 14,801,712
effective search space: 680878752
effective search space used: 680878752
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.