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Search of human proteins with 169168128
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169168128 PREDICTED: chromosome 5 open reading frame 50
[Homo sapiens]
(371 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239754171 PREDICTED: chromosome 5 open reading frame 50 [Homo... 759 0.0
gi|169168128 PREDICTED: chromosome 5 open reading frame 50 [Homo... 759 0.0
gi|239742721 PREDICTED: chromosome 5 open reading frame 50 [Homo... 759 0.0
gi|24497531 Ellis van Creveld syndrome protein [Homo sapiens] 37 0.028
gi|45269141 multimerin 1 [Homo sapiens] 36 0.049
gi|157738667 FYVE and coiled-coil domain containing 1 [Homo sapi... 33 0.41
gi|21735548 centrosomal protein 2 [Homo sapiens] 33 0.54
gi|154813191 IQ motif containing E isoform 1 [Homo sapiens] 32 0.70
gi|154813193 IQ motif containing E isoform 2 [Homo sapiens] 32 0.70
gi|221219020 NYD-SP11 protein [Homo sapiens] 32 1.2
gi|239756957 PREDICTED: dynein, axonemal, heavy chain 17 [Homo s... 32 1.2
gi|239751459 PREDICTED: dynein, axonemal, heavy chain 17 [Homo s... 32 1.2
gi|239745966 PREDICTED: dynein, axonemal, heavy chain 17 [Homo s... 32 1.2
gi|153791497 ciliary rootlet coiled-coil [Homo sapiens] 32 1.2
gi|194578896 golgi autoantigen, golgin subfamily a, 8E [Homo sap... 32 1.2
gi|124249396 coiled-coil domain containing 30 [Homo sapiens] 31 1.6
gi|31541964 argininosuccinate lyase isoform 1 [Homo sapiens] 31 1.6
gi|68303549 argininosuccinate lyase isoform 3 [Homo sapiens] 31 1.6
gi|68303547 argininosuccinate lyase isoform 2 [Homo sapiens] 31 1.6
gi|68303542 argininosuccinate lyase isoform 1 [Homo sapiens] 31 1.6
gi|55770888 early endosome antigen 1, 162kD [Homo sapiens] 30 2.7
gi|221139761 zinc finger protein 853 [Homo sapiens] 30 3.5
gi|219521893 coiled-coil transcriptional coactivator isoform 2 [... 30 4.5
gi|33356174 pinin, desmosome associated protein [Homo sapiens] 30 4.5
gi|66773344 hypothetical protein LOC140710 [Homo sapiens] 30 4.5
gi|224458301 family with sequence similarity 186, member A [Homo... 29 5.9
gi|32483397 dopamine receptor D4 [Homo sapiens] 29 5.9
gi|40538794 coiled-coil domain containing 21 [Homo sapiens] 29 5.9
gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-li... 29 7.8
gi|194097347 phosphoinositide-3-kinase, class 2 beta polypeptide... 29 7.8
>gi|239754171 PREDICTED: chromosome 5 open reading frame 50 [Homo
sapiens]
Length = 371
Score = 759 bits (1961), Expect = 0.0
Identities = 371/371 (100%), Positives = 371/371 (100%)
Query: 1 MAEEKVRDVTCPPFFRTAVETALGLVQGIDQFQVQRTPFPRASAGSLDDHSFVRDQRIPH 60
MAEEKVRDVTCPPFFRTAVETALGLVQGIDQFQVQRTPFPRASAGSLDDHSFVRDQRIPH
Sbjct: 1 MAEEKVRDVTCPPFFRTAVETALGLVQGIDQFQVQRTPFPRASAGSLDDHSFVRDQRIPH 60
Query: 61 KVQTGLMTTRKCEAPSAVLDPLPVPRPHQLLGQFSEGQIKPKSQQLHGCLQDHQDDANGL 120
KVQTGLMTTRKCEAPSAVLDPLPVPRPHQLLGQFSEGQIKPKSQQLHGCLQDHQDDANGL
Sbjct: 61 KVQTGLMTTRKCEAPSAVLDPLPVPRPHQLLGQFSEGQIKPKSQQLHGCLQDHQDDANGL 120
Query: 121 WRALKWEARDLSSAARSEAMATQQVDSRRQVAAEQVAAQLLERRRGSHCDDEKQTLLALL 180
WRALKWEARDLSSAARSEAMATQQVDSRRQVAAEQVAAQLLERRRGSHCDDEKQTLLALL
Sbjct: 121 WRALKWEARDLSSAARSEAMATQQVDSRRQVAAEQVAAQLLERRRGSHCDDEKQTLLALL 180
Query: 181 ILVLYLSTEIWGSSWEVSERIRECNYYQNLAVPQGLEYQTNEPSEEPIKTIRNWLKEKLH 240
ILVLYLSTEIWGSSWEVSERIRECNYYQNLAVPQGLEYQTNEPSEEPIKTIRNWLKEKLH
Sbjct: 181 ILVLYLSTEIWGSSWEVSERIRECNYYQNLAVPQGLEYQTNEPSEEPIKTIRNWLKEKLH 240
Query: 241 VFSEKLEEEVQQLEQLAWDLELWLDALLGEPHQEEHCSTYKSHLWEWAWALGREHKDFPV 300
VFSEKLEEEVQQLEQLAWDLELWLDALLGEPHQEEHCSTYKSHLWEWAWALGREHKDFPV
Sbjct: 241 VFSEKLEEEVQQLEQLAWDLELWLDALLGEPHQEEHCSTYKSHLWEWAWALGREHKDFPV 300
Query: 301 ESGKRAELPAQTDMSQSQGSSWKHKDQEKEGRVKTLAQDLARGGTSTEPPLRAENRDLNL 360
ESGKRAELPAQTDMSQSQGSSWKHKDQEKEGRVKTLAQDLARGGTSTEPPLRAENRDLNL
Sbjct: 301 ESGKRAELPAQTDMSQSQGSSWKHKDQEKEGRVKTLAQDLARGGTSTEPPLRAENRDLNL 360
Query: 361 IESNLQGTGQP 371
IESNLQGTGQP
Sbjct: 361 IESNLQGTGQP 371
>gi|169168128 PREDICTED: chromosome 5 open reading frame 50 [Homo
sapiens]
Length = 371
Score = 759 bits (1961), Expect = 0.0
Identities = 371/371 (100%), Positives = 371/371 (100%)
Query: 1 MAEEKVRDVTCPPFFRTAVETALGLVQGIDQFQVQRTPFPRASAGSLDDHSFVRDQRIPH 60
MAEEKVRDVTCPPFFRTAVETALGLVQGIDQFQVQRTPFPRASAGSLDDHSFVRDQRIPH
Sbjct: 1 MAEEKVRDVTCPPFFRTAVETALGLVQGIDQFQVQRTPFPRASAGSLDDHSFVRDQRIPH 60
Query: 61 KVQTGLMTTRKCEAPSAVLDPLPVPRPHQLLGQFSEGQIKPKSQQLHGCLQDHQDDANGL 120
KVQTGLMTTRKCEAPSAVLDPLPVPRPHQLLGQFSEGQIKPKSQQLHGCLQDHQDDANGL
Sbjct: 61 KVQTGLMTTRKCEAPSAVLDPLPVPRPHQLLGQFSEGQIKPKSQQLHGCLQDHQDDANGL 120
Query: 121 WRALKWEARDLSSAARSEAMATQQVDSRRQVAAEQVAAQLLERRRGSHCDDEKQTLLALL 180
WRALKWEARDLSSAARSEAMATQQVDSRRQVAAEQVAAQLLERRRGSHCDDEKQTLLALL
Sbjct: 121 WRALKWEARDLSSAARSEAMATQQVDSRRQVAAEQVAAQLLERRRGSHCDDEKQTLLALL 180
Query: 181 ILVLYLSTEIWGSSWEVSERIRECNYYQNLAVPQGLEYQTNEPSEEPIKTIRNWLKEKLH 240
ILVLYLSTEIWGSSWEVSERIRECNYYQNLAVPQGLEYQTNEPSEEPIKTIRNWLKEKLH
Sbjct: 181 ILVLYLSTEIWGSSWEVSERIRECNYYQNLAVPQGLEYQTNEPSEEPIKTIRNWLKEKLH 240
Query: 241 VFSEKLEEEVQQLEQLAWDLELWLDALLGEPHQEEHCSTYKSHLWEWAWALGREHKDFPV 300
VFSEKLEEEVQQLEQLAWDLELWLDALLGEPHQEEHCSTYKSHLWEWAWALGREHKDFPV
Sbjct: 241 VFSEKLEEEVQQLEQLAWDLELWLDALLGEPHQEEHCSTYKSHLWEWAWALGREHKDFPV 300
Query: 301 ESGKRAELPAQTDMSQSQGSSWKHKDQEKEGRVKTLAQDLARGGTSTEPPLRAENRDLNL 360
ESGKRAELPAQTDMSQSQGSSWKHKDQEKEGRVKTLAQDLARGGTSTEPPLRAENRDLNL
Sbjct: 301 ESGKRAELPAQTDMSQSQGSSWKHKDQEKEGRVKTLAQDLARGGTSTEPPLRAENRDLNL 360
Query: 361 IESNLQGTGQP 371
IESNLQGTGQP
Sbjct: 361 IESNLQGTGQP 371
>gi|239742721 PREDICTED: chromosome 5 open reading frame 50 [Homo
sapiens]
Length = 371
Score = 759 bits (1961), Expect = 0.0
Identities = 371/371 (100%), Positives = 371/371 (100%)
Query: 1 MAEEKVRDVTCPPFFRTAVETALGLVQGIDQFQVQRTPFPRASAGSLDDHSFVRDQRIPH 60
MAEEKVRDVTCPPFFRTAVETALGLVQGIDQFQVQRTPFPRASAGSLDDHSFVRDQRIPH
Sbjct: 1 MAEEKVRDVTCPPFFRTAVETALGLVQGIDQFQVQRTPFPRASAGSLDDHSFVRDQRIPH 60
Query: 61 KVQTGLMTTRKCEAPSAVLDPLPVPRPHQLLGQFSEGQIKPKSQQLHGCLQDHQDDANGL 120
KVQTGLMTTRKCEAPSAVLDPLPVPRPHQLLGQFSEGQIKPKSQQLHGCLQDHQDDANGL
Sbjct: 61 KVQTGLMTTRKCEAPSAVLDPLPVPRPHQLLGQFSEGQIKPKSQQLHGCLQDHQDDANGL 120
Query: 121 WRALKWEARDLSSAARSEAMATQQVDSRRQVAAEQVAAQLLERRRGSHCDDEKQTLLALL 180
WRALKWEARDLSSAARSEAMATQQVDSRRQVAAEQVAAQLLERRRGSHCDDEKQTLLALL
Sbjct: 121 WRALKWEARDLSSAARSEAMATQQVDSRRQVAAEQVAAQLLERRRGSHCDDEKQTLLALL 180
Query: 181 ILVLYLSTEIWGSSWEVSERIRECNYYQNLAVPQGLEYQTNEPSEEPIKTIRNWLKEKLH 240
ILVLYLSTEIWGSSWEVSERIRECNYYQNLAVPQGLEYQTNEPSEEPIKTIRNWLKEKLH
Sbjct: 181 ILVLYLSTEIWGSSWEVSERIRECNYYQNLAVPQGLEYQTNEPSEEPIKTIRNWLKEKLH 240
Query: 241 VFSEKLEEEVQQLEQLAWDLELWLDALLGEPHQEEHCSTYKSHLWEWAWALGREHKDFPV 300
VFSEKLEEEVQQLEQLAWDLELWLDALLGEPHQEEHCSTYKSHLWEWAWALGREHKDFPV
Sbjct: 241 VFSEKLEEEVQQLEQLAWDLELWLDALLGEPHQEEHCSTYKSHLWEWAWALGREHKDFPV 300
Query: 301 ESGKRAELPAQTDMSQSQGSSWKHKDQEKEGRVKTLAQDLARGGTSTEPPLRAENRDLNL 360
ESGKRAELPAQTDMSQSQGSSWKHKDQEKEGRVKTLAQDLARGGTSTEPPLRAENRDLNL
Sbjct: 301 ESGKRAELPAQTDMSQSQGSSWKHKDQEKEGRVKTLAQDLARGGTSTEPPLRAENRDLNL 360
Query: 361 IESNLQGTGQP 371
IESNLQGTGQP
Sbjct: 361 IESNLQGTGQP 371
>gi|24497531 Ellis van Creveld syndrome protein [Homo sapiens]
Length = 992
Score = 37.0 bits (84), Expect = 0.028
Identities = 30/129 (23%), Positives = 60/129 (46%), Gaps = 3/129 (2%)
Query: 159 QLLERRRGSHCDDEKQTLLALLILVLYLSTEIWGSSWEVSERIRECNYYQNLAVPQGLEY 218
++LER+R CD E++ + V+ L E++ S+ + ++ + + Q L GL
Sbjct: 492 EVLERQRLMQCDLEEEENVRATEAVVALCQELYFSTVDTFQKFVDALFLQTLPGMTGLPP 551
Query: 219 QTNEPSEEPIKTIRNWLKEKLHVFSE---KLEEEVQQLEQLAWDLELWLDALLGEPHQEE 275
+ + + ++ W K + F KL +E+ + +Q W E L ++L +E+
Sbjct: 552 EECDYLRQEVQENAAWQLGKSNRFRRQQWKLFQELLEQDQQVWMEECALSSVLQTHLRED 611
Query: 276 HCSTYKSHL 284
H T + L
Sbjct: 612 HEGTIRGVL 620
>gi|45269141 multimerin 1 [Homo sapiens]
Length = 1228
Score = 36.2 bits (82), Expect = 0.049
Identities = 42/198 (21%), Positives = 80/198 (40%), Gaps = 25/198 (12%)
Query: 98 QIKPKSQQLHGCLQDHQDDANGLWRALKWEARDLSSAARSEAMATQQV-DSRRQVAAEQV 156
+++ K L G L+ + + +L L + ++T+QV D + AAE V
Sbjct: 480 ELEVKQTHLEGALEQEHSRSILYYESLNKTLSKLKEV-HEQLLSTEQVSDQKNAPAAESV 538
Query: 157 AAQLLERRRGSHCDDEKQTLLALLI-------------LVLYLSTEIWGSSWEVSERIRE 203
+ + E H + +KQ+L+ L + L + L E E + + +
Sbjct: 539 SNNVTEYMSTLHENIKKQSLMMLQMFEDLHIQESKINNLTVSLEMEKESLRGECEDMLSK 598
Query: 204 CNYYQNLAVPQGLEYQTNEPSEEPIKTIRNWLKEKLHVFSEKLEEEVQQLEQLAWDLELW 263
C ++Q + +EE + + L E L K+++ +QL L +D+E+
Sbjct: 599 CR--------NDFKFQLKD-TEENLHVLNQTLAEVLFPMDNKMDKMSEQLNDLTYDMEI- 648
Query: 264 LDALLGEPHQEEHCSTYK 281
L LL + TY+
Sbjct: 649 LQPLLEQGASLRQTMTYE 666
>gi|157738667 FYVE and coiled-coil domain containing 1 [Homo
sapiens]
Length = 1478
Score = 33.1 bits (74), Expect = 0.41
Identities = 51/240 (21%), Positives = 93/240 (38%), Gaps = 18/240 (7%)
Query: 134 AARSEAMATQQVDSRRQVAAEQVAAQLLERRRGSHCDDEKQTLLALLILVLYLSTEIWGS 193
A E ++V+ ++ EQ+ +L + +D + +L L+ + L E+ G
Sbjct: 409 ALERERTKVEEVNRQQSAQLEQLVKELQLK------EDARASLERLVKEMAPLQEELSGK 462
Query: 194 SWEVSE---RIRECNYYQNLAVPQGLEYQTNEPSEEPIKTIRNWLKEKLHVFSEKLEEEV 250
E + R++E + + + E + + ++ K + L + LE ++
Sbjct: 463 GQEADQLWRRLQELLAHTSSWEEELAELRREKKQQQEEKELLEQEVRSLTRQLQFLETQL 522
Query: 251 QQLEQLAWDLELWLDALLGEPHQEEHCSTYKSHLWEWAWALGREHKDFPVESGKRAELPA 310
Q+ Q DLE L+ + ++H S L A G E PV K L
Sbjct: 523 AQVSQHVSDLEEQKKQLIQD---KDHLSQQVGMLERLAGPPGPE---LPVAGEKNEAL-- 574
Query: 311 QTDMSQSQGSSWKHKDQEKEGRVKTLAQDLARGGTSTEPPLRAENRDLNLIESNLQGTGQ 370
++ S +W ++E+ G + D S E LR NR+L N+ G Q
Sbjct: 575 -VPVNSSLQEAWGKPEEEQRGLQEAQLDDTKVQEGSQEEELRQANRELEKELQNVVGRNQ 633
>gi|21735548 centrosomal protein 2 [Homo sapiens]
Length = 2442
Score = 32.7 bits (73), Expect = 0.54
Identities = 59/258 (22%), Positives = 104/258 (40%), Gaps = 31/258 (12%)
Query: 105 QLHGCLQDHQDDANGLWRALKWEARDLSSAARSEAMATQQVDSRRQVAAEQVAAQLLERR 164
Q L++ + L RA +R AAR+ A A Q+ + A + LLE+
Sbjct: 1930 QAQAVLKERDQELEAL-RAESQSSRHQEEAARARAEALQEALGKAHAALQGKEQHLLEQA 1988
Query: 165 RGSHCDDEKQTLLALLILVLYLSTEIWGSSWEVSE---RIRECNYYQNL-----AVPQGL 216
S + L + + + + E + ++ Y +++ A+ Q
Sbjct: 1989 ELSRSLEASTATLQASLDACQAHSRQLEEALRIQEGEIQDQDLRYQEDVQQLQQALAQRD 2048
Query: 217 EYQTNEPSEEPI-------KTIRNWLKEKLHVFSEKLEEEVQQLEQLAWDLELWLDALLG 269
E ++ E + + N ++EK ++ E+ EEE++ L Q +L+L L
Sbjct: 2049 EELRHQQEREQLLEKSLAQRVQENMIQEKQNLGQEREEEEIRGLHQSVRELQL----TLA 2104
Query: 270 EPHQE--EHCSTYKSHLWEWAWALGREHKDFPVESGK----RAELPAQTDMSQSQGSSWK 323
+ QE E T + + E AL HK P+E E Q ++ + Q + +
Sbjct: 2105 QKEQEILELRETQQRNNLE---ALPHSHKTSPMEEQSLKLDSLEPRLQRELERLQAALRQ 2161
Query: 324 HKDQEKEGRVKTLAQDLA 341
+ +E E R K AQDLA
Sbjct: 2162 TEAREIEWREK--AQDLA 2177
>gi|154813191 IQ motif containing E isoform 1 [Homo sapiens]
Length = 695
Score = 32.3 bits (72), Expect = 0.70
Identities = 36/108 (33%), Positives = 45/108 (41%), Gaps = 12/108 (11%)
Query: 235 LKEKLHVFSEKLEE---EVQQLEQLAWDLELWLD-ALLGEPHQEEH-------CSTYKSH 283
LKE+ E+L + EV+QL Q DLE L+ A GE + E T S
Sbjct: 400 LKEERTALQEQLLQRDLEVKQLLQAKADLEKELECAREGEEERREREEVLREEIQTLTSK 459
Query: 284 LWEWAWALGREHKDFPVESGKRAELPAQTDMSQSQGSSWKHKDQEKEG 331
L E E +D P K ELPA T S+ W D +EG
Sbjct: 460 LQELQEMKKEEKEDCPEVPHKAQELPAPTPSSRHCEQDWP-PDSSEEG 506
>gi|154813193 IQ motif containing E isoform 2 [Homo sapiens]
Length = 679
Score = 32.3 bits (72), Expect = 0.70
Identities = 36/108 (33%), Positives = 45/108 (41%), Gaps = 12/108 (11%)
Query: 235 LKEKLHVFSEKLEE---EVQQLEQLAWDLELWLD-ALLGEPHQEEH-------CSTYKSH 283
LKE+ E+L + EV+QL Q DLE L+ A GE + E T S
Sbjct: 384 LKEERTALQEQLLQRDLEVKQLLQAKADLEKELECAREGEEERREREEVLREEIQTLTSK 443
Query: 284 LWEWAWALGREHKDFPVESGKRAELPAQTDMSQSQGSSWKHKDQEKEG 331
L E E +D P K ELPA T S+ W D +EG
Sbjct: 444 LQELQEMKKEEKEDCPEVPHKAQELPAPTPSSRHCEQDWP-PDSSEEG 490
>gi|221219020 NYD-SP11 protein [Homo sapiens]
Length = 2873
Score = 31.6 bits (70), Expect = 1.2
Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 13/130 (10%)
Query: 154 EQVAAQLLERRRGSHCDDEKQTLLALLILVLYLSTEIWGSSWEVSERIRECNYYQNLAVP 213
E+ ++Q+ E H +E ++LL L LS+E E ER E +
Sbjct: 2211 EKFSSQVDEVESEEHFSEEMESLLDELEKQESLSSE------EEEEREEEEEREEEEVRE 2264
Query: 214 QGLEYQTNEPSEEPIKTIRNWLKEKLHVFSEKLEEEVQQLEQLAWDLELWL-----DALL 268
+ E + E EE K + +EK EK +EEVQ+ E++ + E + ++L
Sbjct: 2265 EEEERKEEEEGEE--KQVEKEEEEKKKKKKEKKKEEVQEKEEVFEEKEEIMSEEETESLS 2322
Query: 269 GEPHQEEHCS 278
E +EE CS
Sbjct: 2323 DEEEEEESCS 2332
>gi|239756957 PREDICTED: dynein, axonemal, heavy chain 17 [Homo
sapiens]
Length = 4470
Score = 31.6 bits (70), Expect = 1.2
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 214 QGLEYQTNEPSEEPIKTIRNWLKEKLHVFSEKLEEEVQQ 252
QGL + T E + P+ +R WL E V+ +K+ +E Q
Sbjct: 2673 QGLLFSTAEVLKTPLDLVRLWLHETERVYGDKMVDEKDQ 2711
>gi|239751459 PREDICTED: dynein, axonemal, heavy chain 17 [Homo
sapiens]
Length = 4485
Score = 31.6 bits (70), Expect = 1.2
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 214 QGLEYQTNEPSEEPIKTIRNWLKEKLHVFSEKLEEEVQQ 252
QGL + T E + P+ +R WL E V+ +K+ +E Q
Sbjct: 2650 QGLLFSTAEVLKTPLDLVRLWLHETERVYGDKMVDEKDQ 2688
>gi|239745966 PREDICTED: dynein, axonemal, heavy chain 17 [Homo
sapiens]
Length = 4485
Score = 31.6 bits (70), Expect = 1.2
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 214 QGLEYQTNEPSEEPIKTIRNWLKEKLHVFSEKLEEEVQQ 252
QGL + T E + P+ +R WL E V+ +K+ +E Q
Sbjct: 2650 QGLLFSTAEVLKTPLDLVRLWLHETERVYGDKMVDEKDQ 2688
>gi|153791497 ciliary rootlet coiled-coil [Homo sapiens]
Length = 2017
Score = 31.6 bits (70), Expect = 1.2
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 96 EGQIKPKSQQLHGCLQDHQD---DANGLWRALKWEARDLSSAARSEAMATQQVDSRRQVA 152
E Q++ + G +Q H+D + L A + +R+ S+ A S +A QQ + RQ
Sbjct: 567 EEQLQRLRDKTDGAMQAHEDAQREVQRLRSANELLSREKSNLAHSLQVAQQQAEELRQER 626
Query: 153 AEQVAAQLLERRRGSHCDDEKQ 174
+ AAQ RR+ ++E++
Sbjct: 627 EKLQAAQEELRRQRDRLEEEQE 648
>gi|194578896 golgi autoantigen, golgin subfamily a, 8E [Homo
sapiens]
Length = 430
Score = 31.6 bits (70), Expect = 1.2
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Query: 196 EVSERIRECNY-YQNLAVPQGLEYQTNEPSEEPIKTIRNWLKEKLHVFSEKLEEEVQQLE 254
E ER+RE Q LA PQ + N ++ ++ + + + + E+LE QQ +
Sbjct: 147 EQQERLREQEERLQQLAEPQNSFKELNNENKSVLQLEQQVKELQEKLGKERLEAASQQKQ 206
Query: 255 QLAWDLELWLDALLGEPHQEEH 276
QL L L AL GE H EH
Sbjct: 207 QLTAQLSLM--ALPGEGHGGEH 226
>gi|124249396 coiled-coil domain containing 30 [Homo sapiens]
Length = 783
Score = 31.2 bits (69), Expect = 1.6
Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Query: 270 EPHQEEHCSTYKSHLWEWAWALG-REHKDFPVESGKRAELPAQTDMSQSQGSSWKHKDQE 328
EP E + K E LG R+ K+ P ES K P + + + KD+E
Sbjct: 124 EPILETEIQSRKEETEELCPKLGERKQKEIPEESVKEGSFPREGQKEEGSQQNRDMKDEE 183
Query: 329 KEGRVKTLAQDLAR 342
KE ++ +++ R
Sbjct: 184 KEQQLTMKPEEIVR 197
>gi|31541964 argininosuccinate lyase isoform 1 [Homo sapiens]
Length = 464
Score = 31.2 bits (69), Expect = 1.6
Identities = 27/107 (25%), Positives = 42/107 (39%), Gaps = 14/107 (13%)
Query: 218 YQTNEPSEEPIKTIRNWLKEKLHVFSEKLEEEVQQLEQLAWDLELWLDALLGEPHQEEHC 277
++ N E+ LKE + + KL + +Q+ DL LW+ + C
Sbjct: 79 FKLNSNDEDIHTANERRLKELIGATAGKLHTGRSRNDQVVTDLRLWM---------RQTC 129
Query: 278 STYKSHLWEWAWALGREHKDFPVESGKRAELPAQTDMSQSQGSSWKH 324
ST LWE L R D E+ + P T + ++Q W H
Sbjct: 130 STLSGLLWE----LIRTMVD-RAEAERDVLFPGYTHLQRAQPIRWSH 171
>gi|68303549 argininosuccinate lyase isoform 3 [Homo sapiens]
Length = 438
Score = 31.2 bits (69), Expect = 1.6
Identities = 27/107 (25%), Positives = 42/107 (39%), Gaps = 14/107 (13%)
Query: 218 YQTNEPSEEPIKTIRNWLKEKLHVFSEKLEEEVQQLEQLAWDLELWLDALLGEPHQEEHC 277
++ N E+ LKE + + KL + +Q+ DL LW+ + C
Sbjct: 79 FKLNSNDEDIHTANERRLKELIGATAGKLHTGRSRNDQVVTDLRLWM---------RQTC 129
Query: 278 STYKSHLWEWAWALGREHKDFPVESGKRAELPAQTDMSQSQGSSWKH 324
ST LWE L R D E+ + P T + ++Q W H
Sbjct: 130 STLSGLLWE----LIRTMVD-RAEAERDVLFPGYTHLQRAQPIRWSH 171
>gi|68303547 argininosuccinate lyase isoform 2 [Homo sapiens]
Length = 444
Score = 31.2 bits (69), Expect = 1.6
Identities = 27/107 (25%), Positives = 42/107 (39%), Gaps = 14/107 (13%)
Query: 218 YQTNEPSEEPIKTIRNWLKEKLHVFSEKLEEEVQQLEQLAWDLELWLDALLGEPHQEEHC 277
++ N E+ LKE + + KL + +Q+ DL LW+ + C
Sbjct: 79 FKLNSNDEDIHTANERRLKELIGATAGKLHTGRSRNDQVVTDLRLWM---------RQTC 129
Query: 278 STYKSHLWEWAWALGREHKDFPVESGKRAELPAQTDMSQSQGSSWKH 324
ST LWE L R D E+ + P T + ++Q W H
Sbjct: 130 STLSGLLWE----LIRTMVD-RAEAERDVLFPGYTHLQRAQPIRWSH 171
>gi|68303542 argininosuccinate lyase isoform 1 [Homo sapiens]
Length = 464
Score = 31.2 bits (69), Expect = 1.6
Identities = 27/107 (25%), Positives = 42/107 (39%), Gaps = 14/107 (13%)
Query: 218 YQTNEPSEEPIKTIRNWLKEKLHVFSEKLEEEVQQLEQLAWDLELWLDALLGEPHQEEHC 277
++ N E+ LKE + + KL + +Q+ DL LW+ + C
Sbjct: 79 FKLNSNDEDIHTANERRLKELIGATAGKLHTGRSRNDQVVTDLRLWM---------RQTC 129
Query: 278 STYKSHLWEWAWALGREHKDFPVESGKRAELPAQTDMSQSQGSSWKH 324
ST LWE L R D E+ + P T + ++Q W H
Sbjct: 130 STLSGLLWE----LIRTMVD-RAEAERDVLFPGYTHLQRAQPIRWSH 171
>gi|55770888 early endosome antigen 1, 162kD [Homo sapiens]
Length = 1411
Score = 30.4 bits (67), Expect = 2.7
Identities = 62/281 (22%), Positives = 105/281 (37%), Gaps = 57/281 (20%)
Query: 97 GQIKPKSQQLHGCLQDHQDDANGLWRALKWEARDLSS---AARSEAMATQQVDSRRQVAA 153
G K Q L LQ +++ + L+ E DL + A E Q+ +
Sbjct: 519 GDKDQKIQNLEALLQKSKENIS----LLEKEREDLYAKIQAGEGETAVLNQLQEKNHTLQ 574
Query: 154 EQVA--AQLLERRRGSH----------CDDEKQTLLALLILVLYLSTEIWGSSWEVSERI 201
EQV + L+ + SH ++K L A VL L T + + +++E
Sbjct: 575 EQVTQLTEKLKNQSESHKQAQENLHDQVQEQKAHLRAAQDRVLSLETSVNELNSQLNESK 634
Query: 202 RECNYYQNLAVPQGLEYQTNEPSEEPIKTI-RNWLKEKLHVFSEKLEEEVQQLEQLAWDL 260
+ + ++ + E S E KT R L+ L L+++ Q+L ++ L
Sbjct: 635 EKVSQL-DIQIKAKTELLL---SAEAAKTAQRADLQNHLDTAQNALQDKQQELNKITTQL 690
Query: 261 ELWLDALLGEPHQEEHCSTYKSHLWEWAWALGREHKDFPVESGKRAELPAQTDMSQSQGS 320
+ L ++EHCS +SHL E+ + +
Sbjct: 691 DQVTAKL---QDKQEHCSQLESHLKEY----------------------------KEKYL 719
Query: 321 SWKHKDQEKEGRVKTLAQDLARGGTSTEPPLR--AENRDLN 359
S + K +E EG++K L D S E L+ + R LN
Sbjct: 720 SLEQKTEELEGQIKKLEADSLEVKASKEQALQDLQQQRQLN 760
>gi|221139761 zinc finger protein 853 [Homo sapiens]
Length = 659
Score = 30.0 bits (66), Expect = 3.5
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 214 QGLEYQTNEPSEEPIKTIRNWLKEKLHVFSEKLEEEVQQLEQLAWDLELWLDALLGEPHQ 273
Q LE Q ++ + ++ L+E+L ++LE++ QQLEQ LEL LG Q
Sbjct: 340 QELERQQELERQQEQRQLQLKLQEELQQLEQQLEQQQQQLEQQEVQLEL-TPVELGAQQQ 398
Query: 274 E 274
E
Sbjct: 399 E 399
>gi|219521893 coiled-coil transcriptional coactivator isoform 2
[Homo sapiens]
Length = 606
Score = 29.6 bits (65), Expect = 4.5
Identities = 49/193 (25%), Positives = 80/193 (41%), Gaps = 20/193 (10%)
Query: 95 SEGQIKPKSQQLHGCLQDHQDDANGLWRALKWEARDLSSAARSEAMATQQVDSRRQVAAE 154
SE +++P +QL G Q+ A + +L+SAA + ++ R AE
Sbjct: 249 SEAELEPLKEQLRGA----QELAASSQQKATLLGEELASAAAARDRTIAELHRSRLEVAE 304
Query: 155 QVAAQLLERRRGSHCDDEK-----------QTLLALLILVLYLSTEIWGSSWEVSE-RIR 202
V +L E G H +EK Q++ A +L LS EI V E R +
Sbjct: 305 -VNGRLAEL--GLHLKEEKCQWSKERAGLLQSVEAEKDKILKLSAEILRLEKAVQEERTQ 361
Query: 203 ECNYYQNLAVPQGLEYQTNEPSEEPIKTIRNWLKEKLHVFSEKLEEEVQQLEQLAWDLEL 262
+ LA + S+ + +R+ L+ L E+L+EE Q+L + LE
Sbjct: 362 NQVFKTELAREKDSSLVQLSESKRELTELRSALRV-LQKEKEQLQEEKQELLEYMRKLEA 420
Query: 263 WLDALLGEPHQEE 275
L+ + E E+
Sbjct: 421 RLEKVADEKWNED 433
>gi|33356174 pinin, desmosome associated protein [Homo sapiens]
Length = 717
Score = 29.6 bits (65), Expect = 4.5
Identities = 31/130 (23%), Positives = 57/130 (43%), Gaps = 20/130 (15%)
Query: 217 EYQTNEPSEEPIKTIRNWLKEKLHVFSEKLEEEVQQLEQLAWDLELWLDALLGEPHQEEH 276
E + +EP EP+ + + +L + S+ + V Q + + +L L L P +
Sbjct: 462 EEKESEPQPEPVAQPQPQSQPQLQLQSQS--QPVLQSQPPSQPEDLSLAVLQPTPQVTQE 519
Query: 277 CSTYKSHLWEWAWALGREHKDFPVESGKRAELPAQTDMSQSQGSSWKHKDQEKEGRVKTL 336
+ HL E KDFPVES K E+P + ++ H + + + + ++
Sbjct: 520 ----QGHLLP-------ERKDFPVESVKLTEVPVEPVLT-------VHPESKSKTKTRSR 561
Query: 337 AQDLARGGTS 346
++ AR TS
Sbjct: 562 SRGRARNKTS 571
>gi|66773344 hypothetical protein LOC140710 [Homo sapiens]
Length = 1016
Score = 29.6 bits (65), Expect = 4.5
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
Query: 232 RNWLKEKLHVFSEKLEEEVQQLEQLAWDLELWLDAL--LGEPHQEEHCSTYKSHLWEWAW 289
RNW +EKL + E+L+ E QQ+EQ +L+ L L +P +H K + +W
Sbjct: 842 RNWSQEKLQLV-ERLQGEKQQVEQQVKELQNRLSQLQKAADPWVLKHSELEKQ---DNSW 897
Query: 290 ALGREHKDFPVESGKRAEL 308
R K E+ EL
Sbjct: 898 KETRSEKIHDKEAVSEVEL 916
>gi|224458301 family with sequence similarity 186, member A [Homo
sapiens]
Length = 2351
Score = 29.3 bits (64), Expect = 5.9
Identities = 39/174 (22%), Positives = 63/174 (36%), Gaps = 38/174 (21%)
Query: 199 ERIRECNYYQNLAVPQGLEYQTNEPSEEPIKTIRNWLKEKLHVFSEKLEEEVQQLEQLAW 258
E+ R+ Y Q +G E + ++ + RN LKE SE EE+
Sbjct: 819 EKQRQEQYLQ-----EGQEQMSGMSLKQQLLGERNLLKEHYEKISENWEEK--------- 864
Query: 259 DLELWLDALLGEPHQEEHCSTYKSHLWEWAWALGREHKDFPVESGKRAELPAQTDMSQSQ 318
+ WL G+ Q+ + +W+ E K+A P Q + + Q
Sbjct: 865 --KAWLQMKEGKQEQQSQKQWQEEEMWK--------------EEQKQA-TPKQAEQEEKQ 907
Query: 319 GSSWKHKDQEKEGRVKTLAQDLARGGTSTEPP---LRAENRDLNLIESNLQGTG 369
K + QE+E K+ Q L G + L EN + I+ + G
Sbjct: 908 ----KQRGQEEEELPKSSLQRLEEGTQKMKTQGLLLEKENGQMRQIQKEAKHLG 957
>gi|32483397 dopamine receptor D4 [Homo sapiens]
Length = 419
Score = 29.3 bits (64), Expect = 5.9
Identities = 12/26 (46%), Positives = 20/26 (76%)
Query: 176 LLALLILVLYLSTEIWGSSWEVSERI 201
LLALL+L L++ +E+ G +W +S R+
Sbjct: 82 LLALLVLPLFVYSEVQGGAWLLSPRL 107
>gi|40538794 coiled-coil domain containing 21 [Homo sapiens]
Length = 762
Score = 29.3 bits (64), Expect = 5.9
Identities = 45/202 (22%), Positives = 87/202 (43%), Gaps = 40/202 (19%)
Query: 134 AARSEAMATQQVDSRRQVAAEQVAAQLLERRRGSHCDDEKQTLLALLILVLYLSTEIWGS 193
A ++EA++ +++D ++++A +V QL+ +L + + S E+
Sbjct: 399 AQKTEALSREKIDLEKKLSASEVEVQLIRE--------------SLKVALQKHSEEVKKQ 444
Query: 194 SWEVSERIRECNYYQNLAVPQGLEYQTNEPSEEPIKTIRNWLKEKLHVFSEKLEEEVQQL 253
V R + N NL E + N ++ I+T+ +L + LE+ +Q
Sbjct: 445 EERVKGRDKHIN---NLKKKCQKESEQNREKQQRIETLERYLAD-----LPTLEDHQKQS 496
Query: 254 EQLAWDLELWLDALLGEPHQEEHCSTYKSHLWEWAWALGREHKDFPVESGKRAELPAQTD 313
+QL D+ L +E + +S L E A+ RE K+ +ES ++ E
Sbjct: 497 QQLK-------DSELKSTELQEKVTELES-LLEETQAICRE-KEIQLESLRQRE------ 541
Query: 314 MSQSQGSSWKHKDQEKEGRVKT 335
++ SS H Q+K+ +T
Sbjct: 542 ---AEFSSAGHSLQDKQSVEET 560
>gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-like
[Homo sapiens]
Length = 828
Score = 28.9 bits (63), Expect = 7.8
Identities = 25/147 (17%), Positives = 62/147 (42%), Gaps = 12/147 (8%)
Query: 195 WEVSERIRECNYYQNLAVPQGLEYQTNEPSEEPIKTIRNWLKEKLHVFSEKLEEEVQQLE 254
W+ E++RE Q + + + EE ++ ++E+ + E+ EE++Q+ E
Sbjct: 530 WQQEEKMREEKKTQEQE-KKTWDQEEKMREEERMREREKKMREEEEMMREQ-EEKMQEQE 587
Query: 255 QLAWDLE--LWLDALLGEPHQEEHCSTYKSHLWEWAWALGREHKDFPVESGKRAELPAQT 312
+ + E +W QEE + +WE + + ++ ++ + +
Sbjct: 588 EKMREQEEKMW--------EQEEKMQEQEEKMWEQEEKMWEQEEEDKMQEQEEMMWEQEE 639
Query: 313 DMSQSQGSSWKHKDQEKEGRVKTLAQD 339
M + + W+ +++ +E K Q+
Sbjct: 640 KMQEQEEKMWEQEEKMREQEEKMREQE 666
>gi|194097347 phosphoinositide-3-kinase, class 2 beta polypeptide
[Homo sapiens]
Length = 1634
Score = 28.9 bits (63), Expect = 7.8
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 202 RECNYYQNLAVPQGLEYQTNEPSEEPIKTI 231
R+C+Y+ + AVP L +Q +P E I+ I
Sbjct: 1052 RDCSYFNSNAVPLKLSFQNVDPLGENIRVI 1081
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.130 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,592,608
Number of Sequences: 37866
Number of extensions: 746867
Number of successful extensions: 2605
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 2570
Number of HSP's gapped (non-prelim): 60
length of query: 371
length of database: 18,247,518
effective HSP length: 104
effective length of query: 267
effective length of database: 14,309,454
effective search space: 3820624218
effective search space used: 3820624218
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.