Guide to the Human Genome
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Name: ASL Sequence: fasta or formatted (464aa) NCBI GI: 31541964
Description:

argininosuccinate lyase isoform 1

Referenced in:

Crystallins and Other Eye Proteins
Urea Cycle, Nitric Oxide, and Polyamines

Other entries for this name:
alt mRNA [464aa] argininosuccinate lyase isoform 1
alt prot [444aa] argininosuccinate lyase isoform 2
alt prot [438aa] argininosuccinate lyase isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.5         44           1
 C cysteine            1.1          5           1
 D aspartate           5.6         26           1
 E glutamate           6.5         30           2
 F phenylalanine       3.2         15           1
 G glycine             7.3         34           2
 H histidine           2.4         11           1
 I isoleucine          3.9         18           1
 K lysine              4.3         20           2
 L leucine            12.5         58           2
 M methionine          3.2         15           1
 N asparagine          2.8         13           1
 P proline             2.4         11           1
 Q glutamine           5.2         24           2
 R arginine            6.5         30           2
 S serine              7.8         36           2
 T threonine           5.4         25           1
 V valine              6.2         29           2
 W tryptophan          2.2         10           1
 Y tyrosine            2.2         10           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   argininosuccinate lyase isoform 1 
ASL                   1.000   argininosuccinate lyase isoform 1 
ASL                   0.942   argininosuccinate lyase isoform 2 
ASL                   0.931   argininosuccinate lyase isoform 3 
DLG5                  0.009   discs large homolog 5 
C5orf50               0.007   PREDICTED: chromosome 5 open reading frame 50 [Homo...
C5orf50               0.007   PREDICTED: chromosome 5 open reading frame 50 [Homo...
C5orf50               0.007   PREDICTED: chromosome 5 open reading frame 50 [Homo...
FAM170A               0.007   family with sequence similarity 170, member A [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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