Search of human proteins with 169164061

Search of human proteins with 169164061

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169164061 PREDICTED: similar to anaphase promoting complex
subunit 1 [Homo sapiens]
         (275 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169164061 PREDICTED: similar to anaphase promoting complex su...   555   e-158
gi|239741648 PREDICTED: similar to anaphase promoting complex su...   472   e-133
gi|12056971 anaphase promoting complex subunit 1 [Homo sapiens]       462   e-130
gi|15812226 transcriptional regulating factor 1 [Homo sapiens]         33   0.21 
gi|61676188 HECT, UBA and WWE domain containing 1 [Homo sapiens]       31   1.0  
gi|7705558 inositol-3-phosphate synthase 1 [Homo sapiens]              30   1.8  
gi|31657123 Hermansky-Pudlak syndrome 5 isoform a [Homo sapiens]       30   1.8  
gi|31657125 Hermansky-Pudlak syndrome 5 isoform b [Homo sapiens]       30   1.8  
gi|31657127 Hermansky-Pudlak syndrome 5 isoform b [Homo sapiens]       30   1.8  
gi|13129124 caspase recruitment domain protein 14 isoform 1 [Hom...    30   1.8  
gi|16507955 caspase recruitment domain protein 14 isoform 2 [Hom...    30   1.8  
gi|210147457 intermediate filament family orphan 2 [Homo sapiens]      30   2.3  
gi|154759273 testis specific, 10 interacting protein [Homo sapiens]    30   3.0  
gi|83367077 mucin 16 [Homo sapiens]                                    29   5.1  
gi|109637791 transcription factor-like nuclear regulator [Homo s...    29   5.1  
gi|45505155 F-box protein 38 isoform a [Homo sapiens]                  29   5.1  
gi|45545409 F-box protein 38 isoform b [Homo sapiens]                  29   5.1  
gi|4502443 dystonin isoform 1e precursor [Homo sapiens]                28   6.7  

>gi|169164061 PREDICTED: similar to anaphase promoting complex
           subunit 1 [Homo sapiens]
          Length = 275

 Score =  555 bits (1429), Expect = e-158
 Identities = 275/275 (100%), Positives = 275/275 (100%)

Query: 1   MRFFCECLFSKTGMSAQFTSLAFHLSFILLSIALYILGDESSVSDESSQYLTRITVAPQK 60
           MRFFCECLFSKTGMSAQFTSLAFHLSFILLSIALYILGDESSVSDESSQYLTRITVAPQK
Sbjct: 1   MRFFCECLFSKTGMSAQFTSLAFHLSFILLSIALYILGDESSVSDESSQYLTRITVAPQK 60

Query: 61  LQAEQEENRFSFRHSTSVSSLAERLVGWMTNVGFTLRDLETLPFGIALPIRDAIYHCREQ 120
           LQAEQEENRFSFRHSTSVSSLAERLVGWMTNVGFTLRDLETLPFGIALPIRDAIYHCREQ
Sbjct: 61  LQAEQEENRFSFRHSTSVSSLAERLVGWMTNVGFTLRDLETLPFGIALPIRDAIYHCREQ 120

Query: 121 PASDWPEAVCLLTGRQDLSKQACEGNLPKGKSVLSSDVPSGTETEEEDDGMNDMNHEVMS 180
           PASDWPEAVCLLTGRQDLSKQACEGNLPKGKSVLSSDVPSGTETEEEDDGMNDMNHEVMS
Sbjct: 121 PASDWPEAVCLLTGRQDLSKQACEGNLPKGKSVLSSDVPSGTETEEEDDGMNDMNHEVMS 180

Query: 181 LIWSEDLRVQDVRRLLQSAHPVRVNVVQYPELSDHEFIEEKENRLLQLCQQTMALPVGRG 240
           LIWSEDLRVQDVRRLLQSAHPVRVNVVQYPELSDHEFIEEKENRLLQLCQQTMALPVGRG
Sbjct: 181 LIWSEDLRVQDVRRLLQSAHPVRVNVVQYPELSDHEFIEEKENRLLQLCQQTMALPVGRG 240

Query: 241 MFTFFSYHPVPTEPLPIPKLNLTGMLNSGLNEKGK 275
           MFTFFSYHPVPTEPLPIPKLNLTGMLNSGLNEKGK
Sbjct: 241 MFTFFSYHPVPTEPLPIPKLNLTGMLNSGLNEKGK 275


>gi|239741648 PREDICTED: similar to anaphase promoting complex
           subunit 1 [Homo sapiens]
          Length = 679

 Score =  472 bits (1215), Expect = e-133
 Identities = 233/237 (98%), Positives = 236/237 (99%)

Query: 28  ILLSIALYILGDESSVSDESSQYLTRITVAPQKLQAEQEENRFSFRHSTSVSSLAERLVG 87
           ++LSIALYILGDESSVSDESSQYLTRITVAPQKLQAEQEENRFSFRHSTSVSSLAERLVG
Sbjct: 169 VVLSIALYILGDESSVSDESSQYLTRITVAPQKLQAEQEENRFSFRHSTSVSSLAERLVG 228

Query: 88  WMTNVGFTLRDLETLPFGIALPIRDAIYHCREQPASDWPEAVCLLTGRQDLSKQACEGNL 147
           WMTNVGFTLRDLETLPFGIALPIRDAIYHCREQPASDWPEAVCLLTGRQDLSKQACEGNL
Sbjct: 229 WMTNVGFTLRDLETLPFGIALPIRDAIYHCREQPASDWPEAVCLLTGRQDLSKQACEGNL 288

Query: 148 PKGKSVLSSDVPSGTETEEEDDGMNDMNHEVMSLIWSEDLRVQDVRRLLQSAHPVRVNVV 207
           PKGKSVLSSDVPSGTETEEEDDGMNDMNHEVMSLIWSEDLRVQDVRRLLQSAHPVRVNVV
Sbjct: 289 PKGKSVLSSDVPSGTETEEEDDGMNDMNHEVMSLIWSEDLRVQDVRRLLQSAHPVRVNVV 348

Query: 208 QYPELSDHEFIEEKENRLLQLCQQTMALPVGRGMFTFFSYHPVPTEPLPIPKLNLTG 264
           QYPELSDHEFIEEKENRLLQLCQ+TMALPVGRGMFT FSYHPVPTEPLPIPKLNLTG
Sbjct: 349 QYPELSDHEFIEEKENRLLQLCQRTMALPVGRGMFTLFSYHPVPTEPLPIPKLNLTG 405


>gi|12056971 anaphase promoting complex subunit 1 [Homo sapiens]
          Length = 1944

 Score =  462 bits (1189), Expect = e-130
 Identities = 228/237 (96%), Positives = 232/237 (97%)

Query: 28   ILLSIALYILGDESSVSDESSQYLTRITVAPQKLQAEQEENRFSFRHSTSVSSLAERLVG 87
            ++LSIALYILGDES VSDESSQYLTRIT+APQKLQ EQEENRFSFRHSTSVSSLAERLV 
Sbjct: 873  VVLSIALYILGDESLVSDESSQYLTRITIAPQKLQVEQEENRFSFRHSTSVSSLAERLVV 932

Query: 88   WMTNVGFTLRDLETLPFGIALPIRDAIYHCREQPASDWPEAVCLLTGRQDLSKQACEGNL 147
            WMTNVGFTLRDLETLPFGIALPIRDAIYHCREQPASDWPEAVCLL GRQDLSKQACEGNL
Sbjct: 933  WMTNVGFTLRDLETLPFGIALPIRDAIYHCREQPASDWPEAVCLLIGRQDLSKQACEGNL 992

Query: 148  PKGKSVLSSDVPSGTETEEEDDGMNDMNHEVMSLIWSEDLRVQDVRRLLQSAHPVRVNVV 207
            PKGKSVLSSDVPSGTETEEEDDGMNDMNHEVMSLIWSEDLRVQDVRRLLQSAHPVRVNVV
Sbjct: 993  PKGKSVLSSDVPSGTETEEEDDGMNDMNHEVMSLIWSEDLRVQDVRRLLQSAHPVRVNVV 1052

Query: 208  QYPELSDHEFIEEKENRLLQLCQQTMALPVGRGMFTFFSYHPVPTEPLPIPKLNLTG 264
            QYPELSDHEFIEEKENRLLQLCQ+TMALPVGRGMFT FSYHPVPTEPLPIPKLNLTG
Sbjct: 1053 QYPELSDHEFIEEKENRLLQLCQRTMALPVGRGMFTLFSYHPVPTEPLPIPKLNLTG 1109


>gi|15812226 transcriptional regulating factor 1 [Homo sapiens]
          Length = 1200

 Score = 33.5 bits (75), Expect = 0.21
 Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 9/106 (8%)

Query: 143 CEGNLPKGKSVLSSDVPSGTETEEEDDGMNDMNHEVMSLIWSEDLRVQDVRRLLQSAHPV 202
           C  N   G +V  +  P G +T + +  +N     +     +E   +QD+  L Q  H  
Sbjct: 754 CRSNSIDGSNVTVTPGP-GEQTVDVEPRIN-----IGLRFQAEIPELQDISALAQDTHKA 807

Query: 203 RVNVVQYPELSDHEFIEEKENRLLQLCQQTMALPVGRGMFTFFSYH 248
            +    +PEL +H+  +  EN LL LC  + ALP G G  + F+ H
Sbjct: 808 TLVWKPWPELENHDLQQRVEN-LLNLCCSS-ALP-GGGTNSEFALH 850


>gi|61676188 HECT, UBA and WWE domain containing 1 [Homo sapiens]
          Length = 4374

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)

Query: 183  WSEDLRVQDVRRLLQSAHPVRVNVVQYPE-LSDHEFIEEKENRLLQLCQQ 231
            W+E+ +V D   +      V+V++V + E L D E  E +E R  QL ++
Sbjct: 2651 WTEECKVLDAESMHDCVSVVKVSIVNHLEFLRDEELEERREKRRKQLAEE 2700


>gi|7705558 inositol-3-phosphate synthase 1 [Homo sapiens]
          Length = 558

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 17/45 (37%), Positives = 22/45 (48%)

Query: 52 TRITVAPQKLQAEQEENRFSFRHSTSVSSLAERLVGWMTNVGFTL 96
          TR++     L+      RF+FR +  V  L   LVGW  N G TL
Sbjct: 30 TRVSREGGVLKVHPTSTRFTFRTARQVPRLGVMLVGWGGNNGSTL 74


>gi|31657123 Hermansky-Pudlak syndrome 5 isoform a [Homo sapiens]
          Length = 1129

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 50/182 (27%), Positives = 72/182 (39%), Gaps = 41/182 (22%)

Query: 15  SAQFTSLAFHLSFILLSIALY--ILGDESSVSDESSQYLTRITVAPQKLQAEQEENRFSF 72
           S++ +S++ H SF +L   +Y  I     S SDE S  L   T++        E+ RF  
Sbjct: 432 SSRRSSISSHESFSILDSGIYRIISSRRGSQSDEDSCSLHSQTLS--------EDERFKE 483

Query: 73  RHSTSVSSLAERLVGWMTN--------VGFTLRDLET-LPFGIALPIRD-----AIYHCR 118
             S     L ++  G   N        V F     ET LPFGI LP R      ++   +
Sbjct: 484 FTSQQEEDLPDQCCGSHGNEDNVSHAPVMFETDKNETFLPFGIPLPFRSPSPLVSLQAVK 543

Query: 119 EQPAS---DWPEAVCLLTGRQDL--------SKQACEGNLPKGKSVLSSDVPSGTETEEE 167
           E  +S      E +  L    DL         +Q+CE      + V S   P   +TEEE
Sbjct: 544 ESVSSFVRKTTEKIGTLHTSPDLKVRPELRGDEQSCE------EDVSSDTCPKEEDTEEE 597

Query: 168 DD 169
            +
Sbjct: 598 KE 599


>gi|31657125 Hermansky-Pudlak syndrome 5 isoform b [Homo sapiens]
          Length = 1015

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 50/182 (27%), Positives = 72/182 (39%), Gaps = 41/182 (22%)

Query: 15  SAQFTSLAFHLSFILLSIALY--ILGDESSVSDESSQYLTRITVAPQKLQAEQEENRFSF 72
           S++ +S++ H SF +L   +Y  I     S SDE S  L   T++        E+ RF  
Sbjct: 318 SSRRSSISSHESFSILDSGIYRIISSRRGSQSDEDSCSLHSQTLS--------EDERFKE 369

Query: 73  RHSTSVSSLAERLVGWMTN--------VGFTLRDLET-LPFGIALPIRD-----AIYHCR 118
             S     L ++  G   N        V F     ET LPFGI LP R      ++   +
Sbjct: 370 FTSQQEEDLPDQCCGSHGNEDNVSHAPVMFETDKNETFLPFGIPLPFRSPSPLVSLQAVK 429

Query: 119 EQPAS---DWPEAVCLLTGRQDL--------SKQACEGNLPKGKSVLSSDVPSGTETEEE 167
           E  +S      E +  L    DL         +Q+CE      + V S   P   +TEEE
Sbjct: 430 ESVSSFVRKTTEKIGTLHTSPDLKVRPELRGDEQSCE------EDVSSDTCPKEEDTEEE 483

Query: 168 DD 169
            +
Sbjct: 484 KE 485


>gi|31657127 Hermansky-Pudlak syndrome 5 isoform b [Homo sapiens]
          Length = 1015

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 50/182 (27%), Positives = 72/182 (39%), Gaps = 41/182 (22%)

Query: 15  SAQFTSLAFHLSFILLSIALY--ILGDESSVSDESSQYLTRITVAPQKLQAEQEENRFSF 72
           S++ +S++ H SF +L   +Y  I     S SDE S  L   T++        E+ RF  
Sbjct: 318 SSRRSSISSHESFSILDSGIYRIISSRRGSQSDEDSCSLHSQTLS--------EDERFKE 369

Query: 73  RHSTSVSSLAERLVGWMTN--------VGFTLRDLET-LPFGIALPIRD-----AIYHCR 118
             S     L ++  G   N        V F     ET LPFGI LP R      ++   +
Sbjct: 370 FTSQQEEDLPDQCCGSHGNEDNVSHAPVMFETDKNETFLPFGIPLPFRSPSPLVSLQAVK 429

Query: 119 EQPAS---DWPEAVCLLTGRQDL--------SKQACEGNLPKGKSVLSSDVPSGTETEEE 167
           E  +S      E +  L    DL         +Q+CE      + V S   P   +TEEE
Sbjct: 430 ESVSSFVRKTTEKIGTLHTSPDLKVRPELRGDEQSCE------EDVSSDTCPKEEDTEEE 483

Query: 168 DD 169
            +
Sbjct: 484 KE 485


>gi|13129124 caspase recruitment domain protein 14 isoform 1 [Homo
           sapiens]
          Length = 1004

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 14/108 (12%)

Query: 142 ACEGNLPKGKSVLSSDVPSGTETEEEDDGMNDMNHEVMSLIWS---EDLRVQDV------ 192
           +CE  L +     +SD  SG   +EE + + + N ++ SL +S   +D+  Q +      
Sbjct: 241 SCELELQEQSLRTASDQESG---DEELNRLKEENEKLRSLTFSLAEKDILEQSLDEARGS 297

Query: 193 -RRLLQSAHPVRVNVVQYPELSDHEFIEEKENRLLQLCQQTMALPVGR 239
            + L++  H +R   V   E    ++ EEKE  LLQ  +  MA  + R
Sbjct: 298 RQELVERIHSLRERAVA-AERQREQYWEEKEQTLLQFQKSKMACQLYR 344


>gi|16507955 caspase recruitment domain protein 14 isoform 2 [Homo
           sapiens]
          Length = 434

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 14/108 (12%)

Query: 142 ACEGNLPKGKSVLSSDVPSGTETEEEDDGMNDMNHEVMSLIWS---EDLRVQDV------ 192
           +CE  L +     +SD  SG   +EE + + + N ++ SL +S   +D+  Q +      
Sbjct: 4   SCELELQEQSLRTASDQESG---DEELNRLKEENEKLRSLTFSLAEKDILEQSLDEARGS 60

Query: 193 -RRLLQSAHPVRVNVVQYPELSDHEFIEEKENRLLQLCQQTMALPVGR 239
            + L++  H +R   V   E    ++ EEKE  LLQ  +  MA  + R
Sbjct: 61  RQELVERIHSLRERAVA-AERQREQYWEEKEQTLLQFQKSKMACQLYR 107


>gi|210147457 intermediate filament family orphan 2 [Homo sapiens]
          Length = 517

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 29/107 (27%), Positives = 43/107 (40%), Gaps = 6/107 (5%)

Query: 61  LQAEQEENRFSFRHSTSVSSLAERLVGWMTNVGFTLRDLETLPFGIALPIRDAIYHCREQ 120
           LQ EQEEN  +  H T  S    R   +   +G    +L T    +   + + +  C  +
Sbjct: 405 LQGEQEENLGNLIHETE-SFFKTRDKEYQETIGQIELELATAKSDMNRHLHEYMEMCSMK 463

Query: 121 PASDWPEAVCLLTGRQDLSKQACEGNLPKGKSVLSSDVPSGTETEEE 167
              D     C     + L K + + N P   SV SSD  S  E ++E
Sbjct: 464 RGLDVQMETC-----RRLIKGSADRNSPSPSSVASSDSGSTDEIQDE 505


>gi|154759273 testis specific, 10 interacting protein [Homo sapiens]
          Length = 556

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 38/149 (25%), Positives = 63/149 (42%), Gaps = 17/149 (11%)

Query: 90  TNVGFTLRDLETLPFGIALPIRDAIYH--CREQPASDWPEA--VCLLTGRQDLSKQACEG 145
           T+V   L+     P   ALP+  +      R +  ++ PEA   C  T  Q+L  +   G
Sbjct: 117 TDVRAVLQPSSPTPGHQALPMPSSFSQRQSRRKSTANLPEAHGCCWKTEAQNLKARQQLG 176

Query: 146 -----NLPKGKSVLSSDVPSGTETEEEDDGMNDMNHEVMSLIWSEDLRVQDVRRLLQSA- 199
                ++P GK  L S+ PSG +      G    + + + L   + L  ++  R L S  
Sbjct: 177 AWGGVSIPTGKGELGSEPPSGLQLPGRRPGSGSASDKQVQL---QSLGAEEAERGLSSGV 233

Query: 200 ---HPVRVNVVQYPELSD-HEFIEEKENR 224
               P R ++ +  + S+  E  EE E+R
Sbjct: 234 LPQRPRRGSISEEEQFSEATEEAEEGEHR 262


>gi|83367077 mucin 16 [Homo sapiens]
          Length = 14507

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 17/46 (36%), Positives = 22/46 (47%)

Query: 127  EAVCLLTGRQDLSKQACEGNLPKGKSVLSSDVPSGTETEEEDDGMN 172
            E    LT R   +  + E + P   S L S VP+GT TE    G+N
Sbjct: 5183 EPTYFLTPRLRETSTSQESSFPTDTSFLLSKVPTGTITEVSSTGVN 5228


>gi|109637791 transcription factor-like nuclear regulator [Homo
            sapiens]
          Length = 2624

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)

Query: 37   LGDESSVSDESSQYLTRITVAPQKLQAEQEENRFSFRHSTSVSSLAE 83
            +GD S  S    QYL ++T  PQ L  E   ++ +    T++SS +E
Sbjct: 1777 VGDNSPSSVVEEQYLNKLTSCPQPLN-ETSYSKIALDGKTTISSTSE 1822


>gi|45505155 F-box protein 38 isoform a [Homo sapiens]
          Length = 1113

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 11/75 (14%)

Query: 148 PKGKSV----LSSDVPSGTETEEEDDGMNDMNHEVMSLIWSEDLRVQDV------RRLLQ 197
           P+ KSV    +++++P     +E  D MN ++HEV+  I+   L +QD+       R L+
Sbjct: 3   PRKKSVKTCIMNNEIPEEMTADETKDYMNQLSHEVLCHIF-RYLPLQDIMCMECLSRKLK 61

Query: 198 SAHPVRVNVVQYPEL 212
            A  + + VV+  +L
Sbjct: 62  EAVTLYLRVVRVVDL 76


>gi|45545409 F-box protein 38 isoform b [Homo sapiens]
          Length = 1188

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 11/75 (14%)

Query: 148 PKGKSV----LSSDVPSGTETEEEDDGMNDMNHEVMSLIWSEDLRVQDV------RRLLQ 197
           P+ KSV    +++++P     +E  D MN ++HEV+  I+   L +QD+       R L+
Sbjct: 3   PRKKSVKTCIMNNEIPEEMTADETKDYMNQLSHEVLCHIF-RYLPLQDIMCMECLSRKLK 61

Query: 198 SAHPVRVNVVQYPEL 212
            A  + + VV+  +L
Sbjct: 62  EAVTLYLRVVRVVDL 76


>gi|4502443 dystonin isoform 1e precursor [Homo sapiens]
          Length = 2649

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 8/61 (13%)

Query: 171  MNDMNHEVMSLIWSEDLRVQDVRRLLQSAHPVRVNVVQYPELSDHEFIEEKENRLLQLCQ 230
            +  +NHE   L        ++V R+ + AH V    +Q+     H F +EKE   LQ+CQ
Sbjct: 1473 LESLNHEKGKL-------QREVDRITR-AHAVAEKNIQHLNSQIHSFRDEKELERLQICQ 1524

Query: 231  Q 231
            +
Sbjct: 1525 R 1525


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.134    0.395 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,502,898
Number of Sequences: 37866
Number of extensions: 477832
Number of successful extensions: 1363
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 1354
Number of HSP's gapped (non-prelim): 20
length of query: 275
length of database: 18,247,518
effective HSP length: 101
effective length of query: 174
effective length of database: 14,423,052
effective search space: 2509611048
effective search space used: 2509611048
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.