Search of human proteins with 169162197

Search of human proteins with 169162197

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169162197 PREDICTED: similar to hCG1644589 [Homo sapiens]
         (150 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169162466 PREDICTED: similar to hCG1644589 [Homo sapiens]          311   2e-85
gi|169162197 PREDICTED: similar to hCG1644589 [Homo sapiens]          311   2e-85
gi|169161235 PREDICTED: hypothetical protein LOC390998 [Homo sap...   311   2e-85
gi|223890243 ribosomal protein L10 [Homo sapiens]                     177   2e-45
gi|18152783 ribosomal protein L10-like protein [Homo sapiens]         175   1e-44
gi|239754860 PREDICTED: similar to ribosomal protein 10 [Homo sa...   117   5e-27
gi|239749401 PREDICTED: hypothetical protein XP_002347030 [Homo ...   117   5e-27
gi|239743536 PREDICTED: hypothetical protein XP_002342871 [Homo ...   117   5e-27
gi|169173188 PREDICTED: similar to hCG1644362 [Homo sapiens]          113   7e-26
gi|239749350 PREDICTED: similar to hCG1644362 [Homo sapiens]          113   7e-26
gi|239743486 PREDICTED: hypothetical protein LOC645960 [Homo sap...   113   7e-26
gi|239756779 PREDICTED: similar to hCG1643102 [Homo sapiens]           88   3e-18
gi|239751260 PREDICTED: hypothetical protein XP_002347772 [Homo ...    88   3e-18
gi|239745753 PREDICTED: hypothetical protein XP_002343545 [Homo ...    88   3e-18
gi|30089948 protein phosphatase 1E [Homo sapiens]                      33   0.12 
gi|239754361 PREDICTED: hypothetical protein [Homo sapiens]            31   0.34 
gi|239748908 PREDICTED: hypothetical protein XP_002346853 [Homo ...    31   0.34 
gi|239742932 PREDICTED: hypothetical protein XP_002342691 [Homo ...    31   0.34 
gi|148276998 zinc finger protein 628 [Homo sapiens]                    31   0.34 
gi|19718780 semaphorin 6B precursor [Homo sapiens]                     31   0.34 
gi|224994205 wolframin [Homo sapiens]                                  31   0.45 
gi|224994203 wolframin [Homo sapiens]                                  31   0.45 
gi|46409434 hypothetical protein LOC388759 [Homo sapiens]              30   0.59 
gi|45827712 quaking homolog, KH domain RNA binding isoform HQK-7...    30   0.76 
gi|45827710 quaking homolog, KH domain RNA binding isoform HQK-7...    30   0.76 
gi|45827708 quaking homolog, KH domain RNA binding isoform HQK-6...    30   0.76 
gi|45827706 quaking homolog, KH domain RNA binding isoform HQK-5...    30   0.76 
gi|190343021 Sec24-related protein D [Homo sapiens]                    30   0.76 
gi|8923582 zinc finger protein 446 [Homo sapiens]                      30   0.76 
gi|38569475 metaxin 1 isoform 1 [Homo sapiens]                         29   1.3  

>gi|169162466 PREDICTED: similar to hCG1644589 [Homo sapiens]
          Length = 150

 Score =  311 bits (796), Expect = 2e-85
 Identities = 150/150 (100%), Positives = 150/150 (100%)

Query: 1   MAQARGAQAGPDPTNRAADAPVPGQPSAELSRRRPLAPAAAPAVCRLQTGMQVAFGKPQG 60
           MAQARGAQAGPDPTNRAADAPVPGQPSAELSRRRPLAPAAAPAVCRLQTGMQVAFGKPQG
Sbjct: 1   MAQARGAQAGPDPTNRAADAPVPGQPSAELSRRRPLAPAAAPAVCRLQTGMQVAFGKPQG 60

Query: 61  TVARVHIGQVIMFIHTKLQNKEHVIGALHRVTFKFPGHQKVHISKKWGFTKFNADEFEYV 120
           TVARVHIGQVIMFIHTKLQNKEHVIGALHRVTFKFPGHQKVHISKKWGFTKFNADEFEYV
Sbjct: 61  TVARVHIGQVIMFIHTKLQNKEHVIGALHRVTFKFPGHQKVHISKKWGFTKFNADEFEYV 120

Query: 121 VAEKQLSPDGCGVKSIPSHGPLEKWQALYS 150
           VAEKQLSPDGCGVKSIPSHGPLEKWQALYS
Sbjct: 121 VAEKQLSPDGCGVKSIPSHGPLEKWQALYS 150


>gi|169162197 PREDICTED: similar to hCG1644589 [Homo sapiens]
          Length = 150

 Score =  311 bits (796), Expect = 2e-85
 Identities = 150/150 (100%), Positives = 150/150 (100%)

Query: 1   MAQARGAQAGPDPTNRAADAPVPGQPSAELSRRRPLAPAAAPAVCRLQTGMQVAFGKPQG 60
           MAQARGAQAGPDPTNRAADAPVPGQPSAELSRRRPLAPAAAPAVCRLQTGMQVAFGKPQG
Sbjct: 1   MAQARGAQAGPDPTNRAADAPVPGQPSAELSRRRPLAPAAAPAVCRLQTGMQVAFGKPQG 60

Query: 61  TVARVHIGQVIMFIHTKLQNKEHVIGALHRVTFKFPGHQKVHISKKWGFTKFNADEFEYV 120
           TVARVHIGQVIMFIHTKLQNKEHVIGALHRVTFKFPGHQKVHISKKWGFTKFNADEFEYV
Sbjct: 61  TVARVHIGQVIMFIHTKLQNKEHVIGALHRVTFKFPGHQKVHISKKWGFTKFNADEFEYV 120

Query: 121 VAEKQLSPDGCGVKSIPSHGPLEKWQALYS 150
           VAEKQLSPDGCGVKSIPSHGPLEKWQALYS
Sbjct: 121 VAEKQLSPDGCGVKSIPSHGPLEKWQALYS 150


>gi|169161235 PREDICTED: hypothetical protein LOC390998 [Homo
           sapiens]
          Length = 150

 Score =  311 bits (796), Expect = 2e-85
 Identities = 150/150 (100%), Positives = 150/150 (100%)

Query: 1   MAQARGAQAGPDPTNRAADAPVPGQPSAELSRRRPLAPAAAPAVCRLQTGMQVAFGKPQG 60
           MAQARGAQAGPDPTNRAADAPVPGQPSAELSRRRPLAPAAAPAVCRLQTGMQVAFGKPQG
Sbjct: 1   MAQARGAQAGPDPTNRAADAPVPGQPSAELSRRRPLAPAAAPAVCRLQTGMQVAFGKPQG 60

Query: 61  TVARVHIGQVIMFIHTKLQNKEHVIGALHRVTFKFPGHQKVHISKKWGFTKFNADEFEYV 120
           TVARVHIGQVIMFIHTKLQNKEHVIGALHRVTFKFPGHQKVHISKKWGFTKFNADEFEYV
Sbjct: 61  TVARVHIGQVIMFIHTKLQNKEHVIGALHRVTFKFPGHQKVHISKKWGFTKFNADEFEYV 120

Query: 121 VAEKQLSPDGCGVKSIPSHGPLEKWQALYS 150
           VAEKQLSPDGCGVKSIPSHGPLEKWQALYS
Sbjct: 121 VAEKQLSPDGCGVKSIPSHGPLEKWQALYS 150


>gi|223890243 ribosomal protein L10 [Homo sapiens]
          Length = 214

 Score =  177 bits (450), Expect = 2e-45
 Identities = 85/105 (80%), Positives = 93/105 (88%)

Query: 46  RLQTGMQVAFGKPQGTVARVHIGQVIMFIHTKLQNKEHVIGALHRVTFKFPGHQKVHISK 105
           RLQTGM+ AFGKPQGTVARVHIGQVIM I TKLQNKEHVI AL R  FKFPG QK+HISK
Sbjct: 110 RLQTGMRGAFGKPQGTVARVHIGQVIMSIRTKLQNKEHVIEALRRAKFKFPGRQKIHISK 169

Query: 106 KWGFTKFNADEFEYVVAEKQLSPDGCGVKSIPSHGPLEKWQALYS 150
           KWGFTKFNADEFE +VAEK+L PDGCGVK IP+ GPL+KW+AL+S
Sbjct: 170 KWGFTKFNADEFEDMVAEKRLIPDGCGVKYIPNRGPLDKWRALHS 214


>gi|18152783 ribosomal protein L10-like protein [Homo sapiens]
          Length = 214

 Score =  175 bits (444), Expect = 1e-44
 Identities = 83/105 (79%), Positives = 92/105 (87%)

Query: 46  RLQTGMQVAFGKPQGTVARVHIGQVIMFIHTKLQNKEHVIGALHRVTFKFPGHQKVHISK 105
           RLQTGM+ AFGKPQGTVARVHIGQVIM I TKLQN+EHVI AL R  FKFPG QK+HISK
Sbjct: 110 RLQTGMRGAFGKPQGTVARVHIGQVIMSIRTKLQNEEHVIEALRRAKFKFPGRQKIHISK 169

Query: 106 KWGFTKFNADEFEYVVAEKQLSPDGCGVKSIPSHGPLEKWQALYS 150
           KWGFTKFNADEFE +VA+K L PDGCGVK +PSHGPL+KW+ L+S
Sbjct: 170 KWGFTKFNADEFEDMVAKKCLIPDGCGVKYVPSHGPLDKWRVLHS 214


>gi|239754860 PREDICTED: similar to ribosomal protein 10 [Homo
           sapiens]
          Length = 281

 Score =  117 bits (292), Expect = 5e-27
 Identities = 58/72 (80%), Positives = 61/72 (84%), Gaps = 1/72 (1%)

Query: 45  CRLQTGMQVAFGKPQGTVARVHIGQVIMFIHTKLQNKEHVIGALHRVTFKFPGHQKVHIS 104
           CRL+TG+Q AFGKPQGTVARVHIGQV   I TKLQNKEHVI A  R  FKFPGHQK+HIS
Sbjct: 211 CRLETGIQGAFGKPQGTVARVHIGQV-KSICTKLQNKEHVIEAPCRAKFKFPGHQKIHIS 269

Query: 105 KKWGFTKFNADE 116
           KKWGFTKFN DE
Sbjct: 270 KKWGFTKFNVDE 281


>gi|239749401 PREDICTED: hypothetical protein XP_002347030 [Homo
           sapiens]
          Length = 158

 Score =  117 bits (292), Expect = 5e-27
 Identities = 58/72 (80%), Positives = 61/72 (84%), Gaps = 1/72 (1%)

Query: 45  CRLQTGMQVAFGKPQGTVARVHIGQVIMFIHTKLQNKEHVIGALHRVTFKFPGHQKVHIS 104
           CRL+TG+Q AFGKPQGTVARVHIGQV   I TKLQNKEHVI A  R  FKFPGHQK+HIS
Sbjct: 88  CRLETGIQGAFGKPQGTVARVHIGQV-KSICTKLQNKEHVIEAPCRAKFKFPGHQKIHIS 146

Query: 105 KKWGFTKFNADE 116
           KKWGFTKFN DE
Sbjct: 147 KKWGFTKFNVDE 158


>gi|239743536 PREDICTED: hypothetical protein XP_002342871 [Homo
           sapiens]
          Length = 158

 Score =  117 bits (292), Expect = 5e-27
 Identities = 58/72 (80%), Positives = 61/72 (84%), Gaps = 1/72 (1%)

Query: 45  CRLQTGMQVAFGKPQGTVARVHIGQVIMFIHTKLQNKEHVIGALHRVTFKFPGHQKVHIS 104
           CRL+TG+Q AFGKPQGTVARVHIGQV   I TKLQNKEHVI A  R  FKFPGHQK+HIS
Sbjct: 88  CRLETGIQGAFGKPQGTVARVHIGQV-KSICTKLQNKEHVIEAPCRAKFKFPGHQKIHIS 146

Query: 105 KKWGFTKFNADE 116
           KKWGFTKFN DE
Sbjct: 147 KKWGFTKFNVDE 158


>gi|169173188 PREDICTED: similar to hCG1644362 [Homo sapiens]
          Length = 226

 Score =  113 bits (282), Expect = 7e-26
 Identities = 60/96 (62%), Positives = 69/96 (71%), Gaps = 3/96 (3%)

Query: 44  VCRLQTGMQV--AFGKPQGTVARVHIGQVIMFIHTKLQNKEHVIGALHRVTFKFPGHQKV 101
           VC ++    +  AF KPQG VARVHIGQVIM I TKLQNKEHVI AL +  FKFPG Q +
Sbjct: 19  VCSMENVASIRGAFEKPQGAVARVHIGQVIMSICTKLQNKEHVIEALCKANFKFPGRQNI 78

Query: 102 HISKKWGFTKFNADEFEYVVAEKQLSPDGCGVKSIP 137
           H S+KW FTKF+ DEFE ++AEKQL P   G  SIP
Sbjct: 79  HFSEKWDFTKFSVDEFEDMMAEKQLIPITVG-SSIP 113


>gi|239749350 PREDICTED: similar to hCG1644362 [Homo sapiens]
          Length = 226

 Score =  113 bits (282), Expect = 7e-26
 Identities = 60/96 (62%), Positives = 69/96 (71%), Gaps = 3/96 (3%)

Query: 44  VCRLQTGMQV--AFGKPQGTVARVHIGQVIMFIHTKLQNKEHVIGALHRVTFKFPGHQKV 101
           VC ++    +  AF KPQG VARVHIGQVIM I TKLQNKEHVI AL +  FKFPG Q +
Sbjct: 19  VCSMENVASIRGAFEKPQGAVARVHIGQVIMSICTKLQNKEHVIEALCKANFKFPGRQNI 78

Query: 102 HISKKWGFTKFNADEFEYVVAEKQLSPDGCGVKSIP 137
           H S+KW FTKF+ DEFE ++AEKQL P   G  SIP
Sbjct: 79  HFSEKWDFTKFSVDEFEDMMAEKQLIPITVG-SSIP 113


>gi|239743486 PREDICTED: hypothetical protein LOC645960 [Homo
           sapiens]
          Length = 226

 Score =  113 bits (282), Expect = 7e-26
 Identities = 60/96 (62%), Positives = 69/96 (71%), Gaps = 3/96 (3%)

Query: 44  VCRLQTGMQV--AFGKPQGTVARVHIGQVIMFIHTKLQNKEHVIGALHRVTFKFPGHQKV 101
           VC ++    +  AF KPQG VARVHIGQVIM I TKLQNKEHVI AL +  FKFPG Q +
Sbjct: 19  VCSMENVASIRGAFEKPQGAVARVHIGQVIMSICTKLQNKEHVIEALCKANFKFPGRQNI 78

Query: 102 HISKKWGFTKFNADEFEYVVAEKQLSPDGCGVKSIP 137
           H S+KW FTKF+ DEFE ++AEKQL P   G  SIP
Sbjct: 79  HFSEKWDFTKFSVDEFEDMMAEKQLIPITVG-SSIP 113


>gi|239756779 PREDICTED: similar to hCG1643102 [Homo sapiens]
          Length = 186

 Score = 87.8 bits (216), Expect = 3e-18
 Identities = 47/71 (66%), Positives = 51/71 (71%), Gaps = 3/71 (4%)

Query: 45  CRLQTGMQVAFGKPQGTVARVHIGQVIMFIHTKLQNKEHVIGALHRVTFKFPGHQKVHIS 104
           CRLQT    + GKPQGTVARVHIGQVIM + TKLQNK+ VI  L R  FK  G QK+ IS
Sbjct: 119 CRLQTD---SLGKPQGTVARVHIGQVIMSMRTKLQNKQLVIEDLCRAKFKLLGCQKIRIS 175

Query: 105 KKWGFTKFNAD 115
           KKW FTKF  D
Sbjct: 176 KKWCFTKFKVD 186


>gi|239751260 PREDICTED: hypothetical protein XP_002347772 [Homo
           sapiens]
          Length = 180

 Score = 87.8 bits (216), Expect = 3e-18
 Identities = 47/71 (66%), Positives = 51/71 (71%), Gaps = 3/71 (4%)

Query: 45  CRLQTGMQVAFGKPQGTVARVHIGQVIMFIHTKLQNKEHVIGALHRVTFKFPGHQKVHIS 104
           CRLQT    + GKPQGTVARVHIGQVIM + TKLQNK+ VI  L R  FK  G QK+ IS
Sbjct: 113 CRLQTD---SLGKPQGTVARVHIGQVIMSMRTKLQNKQLVIEDLCRAKFKLLGCQKIRIS 169

Query: 105 KKWGFTKFNAD 115
           KKW FTKF  D
Sbjct: 170 KKWCFTKFKVD 180


>gi|239745753 PREDICTED: hypothetical protein XP_002343545 [Homo
           sapiens]
          Length = 186

 Score = 87.8 bits (216), Expect = 3e-18
 Identities = 47/71 (66%), Positives = 51/71 (71%), Gaps = 3/71 (4%)

Query: 45  CRLQTGMQVAFGKPQGTVARVHIGQVIMFIHTKLQNKEHVIGALHRVTFKFPGHQKVHIS 104
           CRLQT    + GKPQGTVARVHIGQVIM + TKLQNK+ VI  L R  FK  G QK+ IS
Sbjct: 119 CRLQTD---SLGKPQGTVARVHIGQVIMSMRTKLQNKQLVIEDLCRAKFKLLGCQKIRIS 175

Query: 105 KKWGFTKFNAD 115
           KKW FTKF  D
Sbjct: 176 KKWCFTKFKVD 186


>gi|30089948 protein phosphatase 1E [Homo sapiens]
          Length = 755

 Score = 32.7 bits (73), Expect = 0.12
 Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 7/71 (9%)

Query: 77  KLQNKEHVIGALHRVTFKFPG-------HQKVHISKKWGFTKFNADEFEYVVAEKQLSPD 129
           ++Q+   V   L    FK PG       H + H SKKW   +FN   + ++ A++     
Sbjct: 641 RMQSLSPVCSGLENEQFKSPGNRVSRLSHLRHHYSKKWHRFRFNPKFYSFLSAQEPSHKI 700

Query: 130 GCGVKSIPSHG 140
           G  + S+   G
Sbjct: 701 GTSLSSLTGSG 711


>gi|239754361 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 165

 Score = 31.2 bits (69), Expect = 0.34
 Identities = 34/107 (31%), Positives = 43/107 (40%), Gaps = 13/107 (12%)

Query: 9   AGPDPTNRAADAPVPGQPSAELSRRRPLAP-AAAPAVCRLQ---TGMQVAFGKPQGTVA- 63
           A  D +      PVPG P+A         P AAAP   RL+   T        P    A 
Sbjct: 56  AAADSSRWPLPRPVPGSPAAVAPAPGAARPGAAAPRRSRLRRNSTSPARPLRPPSSHPAP 115

Query: 64  -RVHIGQVIMFIHTKLQNKEHVIGALHRVTFKFPGHQKVHISKKWGF 109
            R H+G VI   H +   + HV GAL R   +  G     + K WG+
Sbjct: 116 SRTHLGHVITQCHVR---RGHVPGALARRRARTKG----PMGKIWGW 155


>gi|239748908 PREDICTED: hypothetical protein XP_002346853 [Homo
           sapiens]
          Length = 165

 Score = 31.2 bits (69), Expect = 0.34
 Identities = 34/107 (31%), Positives = 43/107 (40%), Gaps = 13/107 (12%)

Query: 9   AGPDPTNRAADAPVPGQPSAELSRRRPLAP-AAAPAVCRLQ---TGMQVAFGKPQGTVA- 63
           A  D +      PVPG P+A         P AAAP   RL+   T        P    A 
Sbjct: 56  AAADSSRWPLPRPVPGSPAAVAPAPGAARPGAAAPRRSRLRRNSTSPARPLRPPSSHPAP 115

Query: 64  -RVHIGQVIMFIHTKLQNKEHVIGALHRVTFKFPGHQKVHISKKWGF 109
            R H+G VI   H +   + HV GAL R   +  G     + K WG+
Sbjct: 116 SRTHLGHVITQCHVR---RGHVPGALARRRARTKG----PMGKIWGW 155


>gi|239742932 PREDICTED: hypothetical protein XP_002342691 [Homo
           sapiens]
          Length = 165

 Score = 31.2 bits (69), Expect = 0.34
 Identities = 34/107 (31%), Positives = 43/107 (40%), Gaps = 13/107 (12%)

Query: 9   AGPDPTNRAADAPVPGQPSAELSRRRPLAP-AAAPAVCRLQ---TGMQVAFGKPQGTVA- 63
           A  D +      PVPG P+A         P AAAP   RL+   T        P    A 
Sbjct: 56  AAADSSRWPLPRPVPGSPAAVAPAPGAARPGAAAPRRSRLRRNSTSPARPLRPPSSHPAP 115

Query: 64  -RVHIGQVIMFIHTKLQNKEHVIGALHRVTFKFPGHQKVHISKKWGF 109
            R H+G VI   H +   + HV GAL R   +  G     + K WG+
Sbjct: 116 SRTHLGHVITQCHVR---RGHVPGALARRRARTKG----PMGKIWGW 155


>gi|148276998 zinc finger protein 628 [Homo sapiens]
          Length = 1055

 Score = 31.2 bits (69), Expect = 0.34
 Identities = 17/45 (37%), Positives = 20/45 (44%)

Query: 6   GAQAGPDPTNRAADAPVPGQPSAELSRRRPLAPAAAPAVCRLQTG 50
           G  A P P    A+AP   QP + L +  P A A AP    L  G
Sbjct: 314 GPDAAPQPQEAPAEAPKADQPPSPLPQPPPPAAAPAPGFACLPCG 358


>gi|19718780 semaphorin 6B precursor [Homo sapiens]
          Length = 888

 Score = 31.2 bits (69), Expect = 0.34
 Identities = 19/44 (43%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 7   AQAGP-DPTNRAADAPVPGQPSAELSRRRPLAPAAAPAVCRLQT 49
           A  GP DP + A   P P  P    S RRPL P A PA    +T
Sbjct: 803 APTGPLDPASAADGLPRPWSPPPTGSLRRPLGPHAPPAATLRRT 846


>gi|224994205 wolframin [Homo sapiens]
          Length = 890

 Score = 30.8 bits (68), Expect = 0.45
 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 2/40 (5%)

Query: 3  QARGAQAGPDPTNRAADAPVPGQPSAELSRRRPLAPAAAP 42
          +A G QAGP P  R  DA  P +P A+ +R R  A    P
Sbjct: 42 RAPGPQAGPGPGVR--DAAAPAEPQAQHTRSRERADGTGP 79


>gi|224994203 wolframin [Homo sapiens]
          Length = 890

 Score = 30.8 bits (68), Expect = 0.45
 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 2/40 (5%)

Query: 3  QARGAQAGPDPTNRAADAPVPGQPSAELSRRRPLAPAAAP 42
          +A G QAGP P  R  DA  P +P A+ +R R  A    P
Sbjct: 42 RAPGPQAGPGPGVR--DAAAPAEPQAQHTRSRERADGTGP 79


>gi|46409434 hypothetical protein LOC388759 [Homo sapiens]
          Length = 237

 Score = 30.4 bits (67), Expect = 0.59
 Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 1/51 (1%)

Query: 1   MAQARGAQAGPDPTNRAADAPVPGQPS-AELSRRRPLAPAAAPAVCRLQTG 50
           + + +  +AGPDPT   A  P   +PS   L    P AP  A     LQ G
Sbjct: 121 LREQKQRRAGPDPTPSPAPPPAGPRPSPGSLGPSAPAAPRTARGAYELQGG 171


>gi|45827712 quaking homolog, KH domain RNA binding isoform HQK-7B
           [Homo sapiens]
          Length = 319

 Score = 30.0 bits (66), Expect = 0.76
 Identities = 24/73 (32%), Positives = 30/73 (41%), Gaps = 5/73 (6%)

Query: 4   ARGAQAGPDPTNRAADAPVPGQPSAELSRRRPLAPAAAPAVCRLQTGMQVAFGKPQGTVA 63
           A  AQA P    R    P P  P A L    P  P   P + ++QT + +  G P  T A
Sbjct: 219 AATAQAAP----RIITGPAPVLPPAALRTPTPAGPTIMPLIRQIQTAV-MPNGTPHPTAA 273

Query: 64  RVHIGQVIMFIHT 76
            V  G     I+T
Sbjct: 274 IVPPGPEAGLIYT 286


>gi|45827710 quaking homolog, KH domain RNA binding isoform HQK-7
           [Homo sapiens]
          Length = 325

 Score = 30.0 bits (66), Expect = 0.76
 Identities = 24/73 (32%), Positives = 30/73 (41%), Gaps = 5/73 (6%)

Query: 4   ARGAQAGPDPTNRAADAPVPGQPSAELSRRRPLAPAAAPAVCRLQTGMQVAFGKPQGTVA 63
           A  AQA P    R    P P  P A L    P  P   P + ++QT + +  G P  T A
Sbjct: 219 AATAQAAP----RIITGPAPVLPPAALRTPTPAGPTIMPLIRQIQTAV-MPNGTPHPTAA 273

Query: 64  RVHIGQVIMFIHT 76
            V  G     I+T
Sbjct: 274 IVPPGPEAGLIYT 286


>gi|45827708 quaking homolog, KH domain RNA binding isoform HQK-6
           [Homo sapiens]
          Length = 319

 Score = 30.0 bits (66), Expect = 0.76
 Identities = 24/73 (32%), Positives = 30/73 (41%), Gaps = 5/73 (6%)

Query: 4   ARGAQAGPDPTNRAADAPVPGQPSAELSRRRPLAPAAAPAVCRLQTGMQVAFGKPQGTVA 63
           A  AQA P    R    P P  P A L    P  P   P + ++QT + +  G P  T A
Sbjct: 219 AATAQAAP----RIITGPAPVLPPAALRTPTPAGPTIMPLIRQIQTAV-MPNGTPHPTAA 273

Query: 64  RVHIGQVIMFIHT 76
            V  G     I+T
Sbjct: 274 IVPPGPEAGLIYT 286


>gi|45827706 quaking homolog, KH domain RNA binding isoform HQK-5
           [Homo sapiens]
          Length = 341

 Score = 30.0 bits (66), Expect = 0.76
 Identities = 24/73 (32%), Positives = 30/73 (41%), Gaps = 5/73 (6%)

Query: 4   ARGAQAGPDPTNRAADAPVPGQPSAELSRRRPLAPAAAPAVCRLQTGMQVAFGKPQGTVA 63
           A  AQA P    R    P P  P A L    P  P   P + ++QT + +  G P  T A
Sbjct: 219 AATAQAAP----RIITGPAPVLPPAALRTPTPAGPTIMPLIRQIQTAV-MPNGTPHPTAA 273

Query: 64  RVHIGQVIMFIHT 76
            V  G     I+T
Sbjct: 274 IVPPGPEAGLIYT 286


>gi|190343021 Sec24-related protein D [Homo sapiens]
          Length = 1032

 Score = 30.0 bits (66), Expect = 0.76
 Identities = 14/44 (31%), Positives = 23/44 (52%)

Query: 10  GPDPTNRAADAPVPGQPSAELSRRRPLAPAAAPAVCRLQTGMQV 53
           GP P N  A +  P QPSA+ S   P++ ++   +    + MQ+
Sbjct: 86  GPPPVNNVASSHAPYQPSAQSSYPGPISTSSVTQLGSQLSAMQI 129


>gi|8923582 zinc finger protein 446 [Homo sapiens]
          Length = 450

 Score = 30.0 bits (66), Expect = 0.76
 Identities = 15/37 (40%), Positives = 17/37 (45%)

Query: 9   AGPDPTNRAADAPVPGQPSAELSRRRPLAPAAAPAVC 45
           A P PT R    PVP QP+   +R  P A    P  C
Sbjct: 298 ATPAPTVRPGTPPVPTQPTPAETRLEPAATPRKPYTC 334


>gi|38569475 metaxin 1 isoform 1 [Homo sapiens]
          Length = 466

 Score = 29.3 bits (64), Expect = 1.3
 Identities = 18/57 (31%), Positives = 24/57 (42%)

Query: 10  GPDPTNRAADAPVPGQPSAELSRRRPLAPAAAPAVCRLQTGMQVAFGKPQGTVARVH 66
           G  P +  A  PVP   +A  +RR   +P  +P       G  VA G P+   A  H
Sbjct: 82  GRRPPSPEARGPVPRSSAASRARRSLASPGISPGPLTATIGGAVAGGGPRQGRAEAH 138


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.133    0.413 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,731,321
Number of Sequences: 37866
Number of extensions: 319543
Number of successful extensions: 1669
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 47
Number of HSP's that attempted gapping in prelim test: 1570
Number of HSP's gapped (non-prelim): 150
length of query: 150
length of database: 18,247,518
effective HSP length: 93
effective length of query: 57
effective length of database: 14,725,980
effective search space: 839380860
effective search space used: 839380860
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.