Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 169161936
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169161936 PREDICTED: hypothetical protein [Homo sapiens]
(220 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169162451 PREDICTED: hypothetical protein [Homo sapiens] 450 e-127
gi|169161936 PREDICTED: hypothetical protein [Homo sapiens] 450 e-127
gi|169162699 PREDICTED: hypothetical protein [Homo sapiens] 450 e-127
gi|195927056 alkB, alkylation repair homolog 8 [Homo sapiens] 317 7e-87
gi|77695912 TIA-1 related protein isoform 2 [Homo sapiens] 33 0.25
gi|4507499 TIA-1 related protein isoform 1 [Homo sapiens] 33 0.25
gi|188219593 TIA1 protein isoform 1 [Homo sapiens] 31 0.95
gi|188219591 TIA1 protein isoform 2 [Homo sapiens] 31 0.95
gi|16905073 SoxLZ/Sox6 leucine zipper binding protein [Homo sapi... 31 0.95
gi|127138957 zinc finger protein 537 [Homo sapiens] 30 1.6
gi|157388975 coiled-coil domain containing 99 [Homo sapiens] 30 2.1
gi|163659918 sacsin [Homo sapiens] 28 4.7
gi|54112394 calcium channel, voltage-dependent, alpha 2/delta su... 28 4.7
gi|54112392 calcium channel, voltage-dependent, alpha 2/delta su... 28 4.7
gi|221316689 cytidine triphosphate synthase II [Homo sapiens] 28 4.7
gi|28559085 cytidine triphosphate synthase II [Homo sapiens] 28 4.7
gi|28559083 cytidine triphosphate synthase II [Homo sapiens] 28 4.7
gi|194018497 FYVE, RhoGEF and PH domain containing 5 [Homo sapiens] 28 4.7
gi|54112390 calcium channel, voltage-dependent, alpha 2/delta su... 28 6.1
gi|50962882 G patch domain containing 8 [Homo sapiens] 28 6.1
gi|38569394 inhibitor of kappa light polypeptide gene enhancer i... 28 8.0
>gi|169162451 PREDICTED: hypothetical protein [Homo sapiens]
Length = 220
Score = 450 bits (1158), Expect = e-127
Identities = 220/220 (100%), Positives = 220/220 (100%)
Query: 1 MGTAEAAGNEEKEEASKVILSAEEERLVVASVGLGNGVSRNQLLLVLEKCGLVDALLMPP 60
MGTAEAAGNEEKEEASKVILSAEEERLVVASVGLGNGVSRNQLLLVLEKCGLVDALLMPP
Sbjct: 1 MGTAEAAGNEEKEEASKVILSAEEERLVVASVGLGNGVSRNQLLLVLEKCGLVDALLMPP 60
Query: 61 YKPYSFERYKTTEESKRAYVTLNGKEIVDDLGQKMILYLNFVEKAQWKELGPQALPLVLI 120
YKPYSFERYKTTEESKRAYVTLNGKEIVDDLGQKMILYLNFVEKAQWKELGPQALPLVLI
Sbjct: 61 YKPYSFERYKTTEESKRAYVTLNGKEIVDDLGQKMILYLNFVEKAQWKELGPQALPLVLI 120
Query: 121 VVEEIISTEDEKILLESVDQTKDTDHQNFQKCLKHRRVKHFGYEFHCEKNNVDKDKHLPR 180
VVEEIISTEDEKILLESVDQTKDTDHQNFQKCLKHRRVKHFGYEFHCEKNNVDKDKHLPR
Sbjct: 121 VVEEIISTEDEKILLESVDQTKDTDHQNFQKCLKHRRVKHFGYEFHCEKNNVDKDKHLPR 180
Query: 181 GLLDVCDSFLEKWLREGYIKHKPEQLTINQYEPGHDCHGF 220
GLLDVCDSFLEKWLREGYIKHKPEQLTINQYEPGHDCHGF
Sbjct: 181 GLLDVCDSFLEKWLREGYIKHKPEQLTINQYEPGHDCHGF 220
>gi|169161936 PREDICTED: hypothetical protein [Homo sapiens]
Length = 220
Score = 450 bits (1158), Expect = e-127
Identities = 220/220 (100%), Positives = 220/220 (100%)
Query: 1 MGTAEAAGNEEKEEASKVILSAEEERLVVASVGLGNGVSRNQLLLVLEKCGLVDALLMPP 60
MGTAEAAGNEEKEEASKVILSAEEERLVVASVGLGNGVSRNQLLLVLEKCGLVDALLMPP
Sbjct: 1 MGTAEAAGNEEKEEASKVILSAEEERLVVASVGLGNGVSRNQLLLVLEKCGLVDALLMPP 60
Query: 61 YKPYSFERYKTTEESKRAYVTLNGKEIVDDLGQKMILYLNFVEKAQWKELGPQALPLVLI 120
YKPYSFERYKTTEESKRAYVTLNGKEIVDDLGQKMILYLNFVEKAQWKELGPQALPLVLI
Sbjct: 61 YKPYSFERYKTTEESKRAYVTLNGKEIVDDLGQKMILYLNFVEKAQWKELGPQALPLVLI 120
Query: 121 VVEEIISTEDEKILLESVDQTKDTDHQNFQKCLKHRRVKHFGYEFHCEKNNVDKDKHLPR 180
VVEEIISTEDEKILLESVDQTKDTDHQNFQKCLKHRRVKHFGYEFHCEKNNVDKDKHLPR
Sbjct: 121 VVEEIISTEDEKILLESVDQTKDTDHQNFQKCLKHRRVKHFGYEFHCEKNNVDKDKHLPR 180
Query: 181 GLLDVCDSFLEKWLREGYIKHKPEQLTINQYEPGHDCHGF 220
GLLDVCDSFLEKWLREGYIKHKPEQLTINQYEPGHDCHGF
Sbjct: 181 GLLDVCDSFLEKWLREGYIKHKPEQLTINQYEPGHDCHGF 220
>gi|169162699 PREDICTED: hypothetical protein [Homo sapiens]
Length = 220
Score = 450 bits (1158), Expect = e-127
Identities = 220/220 (100%), Positives = 220/220 (100%)
Query: 1 MGTAEAAGNEEKEEASKVILSAEEERLVVASVGLGNGVSRNQLLLVLEKCGLVDALLMPP 60
MGTAEAAGNEEKEEASKVILSAEEERLVVASVGLGNGVSRNQLLLVLEKCGLVDALLMPP
Sbjct: 1 MGTAEAAGNEEKEEASKVILSAEEERLVVASVGLGNGVSRNQLLLVLEKCGLVDALLMPP 60
Query: 61 YKPYSFERYKTTEESKRAYVTLNGKEIVDDLGQKMILYLNFVEKAQWKELGPQALPLVLI 120
YKPYSFERYKTTEESKRAYVTLNGKEIVDDLGQKMILYLNFVEKAQWKELGPQALPLVLI
Sbjct: 61 YKPYSFERYKTTEESKRAYVTLNGKEIVDDLGQKMILYLNFVEKAQWKELGPQALPLVLI 120
Query: 121 VVEEIISTEDEKILLESVDQTKDTDHQNFQKCLKHRRVKHFGYEFHCEKNNVDKDKHLPR 180
VVEEIISTEDEKILLESVDQTKDTDHQNFQKCLKHRRVKHFGYEFHCEKNNVDKDKHLPR
Sbjct: 121 VVEEIISTEDEKILLESVDQTKDTDHQNFQKCLKHRRVKHFGYEFHCEKNNVDKDKHLPR 180
Query: 181 GLLDVCDSFLEKWLREGYIKHKPEQLTINQYEPGHDCHGF 220
GLLDVCDSFLEKWLREGYIKHKPEQLTINQYEPGHDCHGF
Sbjct: 181 GLLDVCDSFLEKWLREGYIKHKPEQLTINQYEPGHDCHGF 220
>gi|195927056 alkB, alkylation repair homolog 8 [Homo sapiens]
Length = 664
Score = 317 bits (811), Expect = 7e-87
Identities = 156/195 (80%), Positives = 173/195 (88%)
Query: 20 LSAEEERLVVASVGLGNGVSRNQLLLVLEKCGLVDALLMPPYKPYSFERYKTTEESKRAY 79
+S + LVVA+ GLGNGVSRNQLL VLEKCGLVDALLMPP KPYSF RY+TTEESKRAY
Sbjct: 38 VSYATQSLVVANGGLGNGVSRNQLLPVLEKCGLVDALLMPPNKPYSFARYRTTEESKRAY 97
Query: 80 VTLNGKEIVDDLGQKMILYLNFVEKAQWKELGPQALPLVLIVVEEIISTEDEKILLESVD 139
VTLNGKE+VDDLGQK+ LYLNFVEK QWKEL PQALP L+VVEEIIS+E+EK+LLESVD
Sbjct: 98 VTLNGKEVVDDLGQKITLYLNFVEKVQWKELRPQALPPGLMVVEEIISSEEEKMLLESVD 157
Query: 140 QTKDTDHQNFQKCLKHRRVKHFGYEFHCEKNNVDKDKHLPRGLLDVCDSFLEKWLREGYI 199
T+DTD+QN QK LKHRRVKHFGYEFH E NNVDKDK L GL D+C+SFLEKWLR+GYI
Sbjct: 158 WTEDTDNQNSQKSLKHRRVKHFGYEFHYENNNVDKDKPLSGGLPDICESFLEKWLRKGYI 217
Query: 200 KHKPEQLTINQYEPG 214
KHKP+Q+TINQYEPG
Sbjct: 218 KHKPDQMTINQYEPG 232
>gi|77695912 TIA-1 related protein isoform 2 [Homo sapiens]
Length = 392
Score = 32.7 bits (73), Expect = 0.25
Identities = 19/79 (24%), Positives = 36/79 (45%)
Query: 9 NEEKEEASKVILSAEEERLVVASVGLGNGVSRNQLLLVLEKCGLVDALLMPPYKPYSFER 68
N ++ V+ + + V G+ +G++ + G + + + P K YSF R
Sbjct: 204 NTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVR 263
Query: 69 YKTTEESKRAYVTLNGKEI 87
+ T E + A V++NG I
Sbjct: 264 FSTHESAAHAIVSVNGTTI 282
>gi|4507499 TIA-1 related protein isoform 1 [Homo sapiens]
Length = 375
Score = 32.7 bits (73), Expect = 0.25
Identities = 19/79 (24%), Positives = 36/79 (45%)
Query: 9 NEEKEEASKVILSAEEERLVVASVGLGNGVSRNQLLLVLEKCGLVDALLMPPYKPYSFER 68
N ++ V+ + + V G+ +G++ + G + + + P K YSF R
Sbjct: 187 NTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVR 246
Query: 69 YKTTEESKRAYVTLNGKEI 87
+ T E + A V++NG I
Sbjct: 247 FSTHESAAHAIVSVNGTTI 265
>gi|188219593 TIA1 protein isoform 1 [Homo sapiens]
Length = 375
Score = 30.8 bits (68), Expect = 0.95
Identities = 18/79 (22%), Positives = 36/79 (45%)
Query: 9 NEEKEEASKVILSAEEERLVVASVGLGNGVSRNQLLLVLEKCGLVDALLMPPYKPYSFER 68
N ++ +V+ + V G+ +G++ + G + + + P K YSF R
Sbjct: 185 NTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVR 244
Query: 69 YKTTEESKRAYVTLNGKEI 87
+ + E + A V++NG I
Sbjct: 245 FNSHESAAHAIVSVNGTTI 263
>gi|188219591 TIA1 protein isoform 2 [Homo sapiens]
Length = 386
Score = 30.8 bits (68), Expect = 0.95
Identities = 18/79 (22%), Positives = 36/79 (45%)
Query: 9 NEEKEEASKVILSAEEERLVVASVGLGNGVSRNQLLLVLEKCGLVDALLMPPYKPYSFER 68
N ++ +V+ + V G+ +G++ + G + + + P K YSF R
Sbjct: 196 NTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVR 255
Query: 69 YKTTEESKRAYVTLNGKEI 87
+ + E + A V++NG I
Sbjct: 256 FNSHESAAHAIVSVNGTTI 274
>gi|16905073 SoxLZ/Sox6 leucine zipper binding protein [Homo
sapiens]
Length = 269
Score = 30.8 bits (68), Expect = 0.95
Identities = 22/97 (22%), Positives = 46/97 (47%), Gaps = 6/97 (6%)
Query: 67 ERYKTTEESKRAYVTLNGKEIVDDLGQKMILYLNF----VEKAQWKELGPQALPLVLIVV 122
E +K EE + + + + D Q +L + E +QW++ P+ +PL V+
Sbjct: 30 EMWKDMEECQNKLSLIGTETLTDSNAQLSLLIMQVKCLTAELSQWQKKTPETIPLTEDVL 89
Query: 123 EEIISTEDEKIL--LESVDQTKDTDHQNFQKCLKHRR 157
+ E +K+ LE V TK++ ++ ++ L+ +
Sbjct: 90 ITLGKEEFQKLRQDLEMVLSTKESKNEKLKEDLEREQ 126
>gi|127138957 zinc finger protein 537 [Homo sapiens]
Length = 1081
Score = 30.0 bits (66), Expect = 1.6
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 70 KTTEESKRAYVTLNGKEIVDDLGQKMILYLNFVEKAQWKEL 110
K EE+K V L + D L Q +Y NF+ + W L
Sbjct: 94 KNEEETKEVTVPLEDTTVSDSLEQMKAVYNNFLSNSYWSNL 134
>gi|157388975 coiled-coil domain containing 99 [Homo sapiens]
Length = 605
Score = 29.6 bits (65), Expect = 2.1
Identities = 31/126 (24%), Positives = 55/126 (43%), Gaps = 6/126 (4%)
Query: 22 AEEERLVVASVGLGNGVSRNQLLLVLEKCGLVDALLMPPYKPYSFERYKTTEESKRAYVT 81
AEEERL A GL S+N+L L+KC + Y+ + + E R +
Sbjct: 16 AEEERLKAAQYGLQLVESQNELQNQLDKCRNEMMTMTESYEQEKYTLQREVELKSRMLES 75
Query: 82 LNGKEIVDDLGQKMILYLNFVE----KAQWKELGPQALPLVLIVVEEIISTEDEKILLES 137
L+ + + + Q+ ++L +E ++ +E+ + + VE + EK L
Sbjct: 76 LSCE--CEAIKQQQKMHLEKLEEQLSRSHGQEVNELKTKIEKLKVELDEARLSEKQLKHQ 133
Query: 138 VDQTKD 143
VD K+
Sbjct: 134 VDHQKE 139
>gi|163659918 sacsin [Homo sapiens]
Length = 4579
Score = 28.5 bits (62), Expect = 4.7
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 14/60 (23%)
Query: 122 VEEIISTEDEKILLESVDQ---TKDTDHQNFQKCLKHRRVKHFGY--------EFHCEKN 170
V + + ED ++LES+DQ TK +NFQ C RR+ G + CEKN
Sbjct: 2391 VRQSCTVEDFALVLESIDQERGTKQITEENFQLC---RRIISEGIWSLIREKKQEFCEKN 2447
>gi|54112394 calcium channel, voltage-dependent, alpha 2/delta
subunit 2 isoform b [Homo sapiens]
Length = 1143
Score = 28.5 bits (62), Expect = 4.7
Identities = 14/42 (33%), Positives = 24/42 (57%)
Query: 80 VTLNGKEIVDDLGQKMILYLNFVEKAQWKELGPQALPLVLIV 121
+ +N +E +D LG+ M+L ++ QW + AL L L+V
Sbjct: 458 IRINTQEYLDVLGRPMVLAGKEAKQVQWTNVYEDALGLGLVV 499
>gi|54112392 calcium channel, voltage-dependent, alpha 2/delta
subunit 2 isoform a [Homo sapiens]
Length = 1145
Score = 28.5 bits (62), Expect = 4.7
Identities = 14/42 (33%), Positives = 24/42 (57%)
Query: 80 VTLNGKEIVDDLGQKMILYLNFVEKAQWKELGPQALPLVLIV 121
+ +N +E +D LG+ M+L ++ QW + AL L L+V
Sbjct: 458 IRINTQEYLDVLGRPMVLAGKEAKQVQWTNVYEDALGLGLVV 499
>gi|221316689 cytidine triphosphate synthase II [Homo sapiens]
Length = 586
Score = 28.5 bits (62), Expect = 4.7
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 33 GLGNGVSRNQLLLVLEKCGL-VDALLMPPYKPYSFERYKTTEESKRAYVTLNGKEIVDDL 91
G+G G+ + + +L+ CGL V A+ + PY + E + +V +G E+ DL
Sbjct: 13 GIGKGIIASSIGTILKSCGLRVTAIKIDPYINIDAGTFSPYEHGE-VFVLNDGGEVDLDL 71
Query: 92 G 92
G
Sbjct: 72 G 72
>gi|28559085 cytidine triphosphate synthase II [Homo sapiens]
Length = 586
Score = 28.5 bits (62), Expect = 4.7
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 33 GLGNGVSRNQLLLVLEKCGL-VDALLMPPYKPYSFERYKTTEESKRAYVTLNGKEIVDDL 91
G+G G+ + + +L+ CGL V A+ + PY + E + +V +G E+ DL
Sbjct: 13 GIGKGIIASSIGTILKSCGLRVTAIKIDPYINIDAGTFSPYEHGE-VFVLNDGGEVDLDL 71
Query: 92 G 92
G
Sbjct: 72 G 72
>gi|28559083 cytidine triphosphate synthase II [Homo sapiens]
Length = 586
Score = 28.5 bits (62), Expect = 4.7
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 33 GLGNGVSRNQLLLVLEKCGL-VDALLMPPYKPYSFERYKTTEESKRAYVTLNGKEIVDDL 91
G+G G+ + + +L+ CGL V A+ + PY + E + +V +G E+ DL
Sbjct: 13 GIGKGIIASSIGTILKSCGLRVTAIKIDPYINIDAGTFSPYEHGE-VFVLNDGGEVDLDL 71
Query: 92 G 92
G
Sbjct: 72 G 72
>gi|194018497 FYVE, RhoGEF and PH domain containing 5 [Homo sapiens]
Length = 1462
Score = 28.5 bits (62), Expect = 4.7
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 8/64 (12%)
Query: 4 AEAAGNEEKEEASKVILSAEEERLVVA--------SVGLGNGVSRNQLLLVLEKCGLVDA 55
+E+A E E+A K+ L AEE +V A G G + +++VLE+ L DA
Sbjct: 366 SESAKGLESEQAPKLGLRAEENPMVGALCGQCGSLQGGAAEGPAAPDVVVVLEEEALDDA 425
Query: 56 LLMP 59
L P
Sbjct: 426 LANP 429
>gi|54112390 calcium channel, voltage-dependent, alpha 2/delta
subunit 1 [Homo sapiens]
Length = 1091
Score = 28.1 bits (61), Expect = 6.1
Identities = 13/42 (30%), Positives = 25/42 (59%)
Query: 80 VTLNGKEIVDDLGQKMILYLNFVEKAQWKELGPQALPLVLIV 121
+ +N +E +D LG+ M+L + ++ QW + AL L L++
Sbjct: 419 IRINTQEYLDVLGRPMVLAGDKAKQVQWTNVYLDALELGLVI 460
>gi|50962882 G patch domain containing 8 [Homo sapiens]
Length = 1502
Score = 28.1 bits (61), Expect = 6.1
Identities = 15/47 (31%), Positives = 25/47 (53%)
Query: 169 KNNVDKDKHLPRGLLDVCDSFLEKWLREGYIKHKPEQLTINQYEPGH 215
K+ VDK+K + + L D+ +F + + Y KH+ IN Y+ H
Sbjct: 116 KDYVDKEKAIAKALEDLRANFYCELCDKQYQKHQEFDNHINSYDHAH 162
>gi|38569394 inhibitor of kappa light polypeptide gene enhancer in
B-cells, kinase complex-associated protein [Homo
sapiens]
Length = 1332
Score = 27.7 bits (60), Expect = 8.0
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 11/94 (11%)
Query: 94 KMILYLNFVEKAQWKELGPQALPLVLIVVEEIISTEDEKILLESVDQTK--DTDHQNF-- 149
K +L+L V + LG LVL+V E+ S +D K L ++ K +T++Q F
Sbjct: 879 KYLLHLVDVNELYDHSLGTYDFDLVLMVAEK--SQKDPKEYLPFLNTLKKMETNYQRFTI 936
Query: 150 QKCLK--HRRVKHF---GYEFHCEKNNVDKDKHL 178
K LK + + H G E+ E N+ KDK+L
Sbjct: 937 DKYLKRYEKAIGHLSKCGPEYFPECLNLIKDKNL 970
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.136 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,788,399
Number of Sequences: 37866
Number of extensions: 382861
Number of successful extensions: 1013
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 997
Number of HSP's gapped (non-prelim): 23
length of query: 220
length of database: 18,247,518
effective HSP length: 98
effective length of query: 122
effective length of database: 14,536,650
effective search space: 1773471300
effective search space used: 1773471300
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.