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Search of human proteins with 11067747
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|11067747 CDC5-like [Homo sapiens]
(802 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|11067747 CDC5-like [Homo sapiens] 1593 0.0
gi|239735490 v-myb myeloblastosis viral oncogene homolog isoform... 73 9e-13
gi|239735496 v-myb myeloblastosis viral oncogene homolog isoform... 73 1e-12
gi|239735494 v-myb myeloblastosis viral oncogene homolog isoform... 73 1e-12
gi|239735492 v-myb myeloblastosis viral oncogene homolog isoform... 73 1e-12
gi|239735488 v-myb myeloblastosis viral oncogene homolog isoform... 73 1e-12
gi|46361980 v-myb myeloblastosis viral oncogene homolog isoform ... 73 1e-12
gi|194328729 v-myb myeloblastosis viral oncogene homolog isoform... 73 1e-12
gi|194328727 v-myb myeloblastosis viral oncogene homolog isoform... 73 1e-12
gi|221139773 v-myb myeloblastosis viral oncogene homolog (avian)... 72 2e-12
gi|122937231 v-myb myeloblastosis viral oncogene homolog (avian)... 72 2e-12
gi|4505293 MYB-related protein B [Homo sapiens] 72 3e-12
gi|92859678 small nuclear RNA activating complex, polypeptide 4,... 62 2e-09
gi|55741709 RNA binding motif protein 25 [Homo sapiens] 49 1e-05
gi|34878777 ring finger protein 20 [Homo sapiens] 49 2e-05
gi|115298682 HBxAg transactivated protein 2 [Homo sapiens] 47 9e-05
gi|58530840 desmoplakin isoform I [Homo sapiens] 45 2e-04
gi|71061468 centromere protein E [Homo sapiens] 45 2e-04
gi|31982906 cingulin-like 1 [Homo sapiens] 45 2e-04
gi|41322923 plectin 1 isoform 11 [Homo sapiens] 45 3e-04
gi|41322914 plectin 1 isoform 10 [Homo sapiens] 45 3e-04
gi|41322919 plectin 1 isoform 8 [Homo sapiens] 45 3e-04
gi|41322910 plectin 1 isoform 7 [Homo sapiens] 45 3e-04
gi|41322916 plectin 1 isoform 6 [Homo sapiens] 45 3e-04
gi|41322908 plectin 1 isoform 3 [Homo sapiens] 45 3e-04
gi|41322912 plectin 1 isoform 2 [Homo sapiens] 45 3e-04
gi|47607492 plectin 1 isoform 1 [Homo sapiens] 45 3e-04
gi|22538461 nuclear receptor co-repressor 1 [Homo sapiens] 45 3e-04
gi|169167715 PREDICTED: hypothetical protein [Homo sapiens] 45 3e-04
gi|239749449 PREDICTED: hypothetical protein [Homo sapiens] 45 3e-04
>gi|11067747 CDC5-like [Homo sapiens]
Length = 802
Score = 1593 bits (4125), Expect = 0.0
Identities = 802/802 (100%), Positives = 802/802 (100%)
Query: 1 MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKK 60
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKK
Sbjct: 1 MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKK 60
Query: 61 TEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDKAAQRDNEEETTDDP 120
TEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDKAAQRDNEEETTDDP
Sbjct: 61 TEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDKAAQRDNEEETTDDP 120
Query: 121 RKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEAR 180
RKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEAR
Sbjct: 121 RKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEAR 180
Query: 181 RLAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFR 240
RLAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFR
Sbjct: 181 RLAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFR 240
Query: 241 KLRQQDLDGELRSEKEGRDRKKDKQHLKRKKESDLPSAILQTSGVSEFTKKRSKLVLPAP 300
KLRQQDLDGELRSEKEGRDRKKDKQHLKRKKESDLPSAILQTSGVSEFTKKRSKLVLPAP
Sbjct: 241 KLRQQDLDGELRSEKEGRDRKKDKQHLKRKKESDLPSAILQTSGVSEFTKKRSKLVLPAP 300
Query: 301 QISDAELQEVVKVGQASEIARQTAEESGITNSASSTLLSEYNVTNNSVALRTPRTPASQD 360
QISDAELQEVVKVGQASEIARQTAEESGITNSASSTLLSEYNVTNNSVALRTPRTPASQD
Sbjct: 301 QISDAELQEVVKVGQASEIARQTAEESGITNSASSTLLSEYNVTNNSVALRTPRTPASQD 360
Query: 361 RILQEAQNLMALTNVDTPLKGGLNTPLHESDFSGVTPQRQVVQTPNTVLSTPFRTPSNGA 420
RILQEAQNLMALTNVDTPLKGGLNTPLHESDFSGVTPQRQVVQTPNTVLSTPFRTPSNGA
Sbjct: 361 RILQEAQNLMALTNVDTPLKGGLNTPLHESDFSGVTPQRQVVQTPNTVLSTPFRTPSNGA 420
Query: 421 EGLTPRSGTTPKPVINSTPGRTPLRDKLNINPEDGMADYSDPSYVKQMERESREHLRLGL 480
EGLTPRSGTTPKPVINSTPGRTPLRDKLNINPEDGMADYSDPSYVKQMERESREHLRLGL
Sbjct: 421 EGLTPRSGTTPKPVINSTPGRTPLRDKLNINPEDGMADYSDPSYVKQMERESREHLRLGL 480
Query: 481 LGLPAPKNDFEIVLPENAEKELEEREIDDTYIEDAADVDARKQAIRDAERVKEMKRMHKA 540
LGLPAPKNDFEIVLPENAEKELEEREIDDTYIEDAADVDARKQAIRDAERVKEMKRMHKA
Sbjct: 481 LGLPAPKNDFEIVLPENAEKELEEREIDDTYIEDAADVDARKQAIRDAERVKEMKRMHKA 540
Query: 541 VQKDLPRPSEVNETILRPLNVEPPLTDLQKSEELIKKEMITMLHYDLLHHPYEPSGNKKG 600
VQKDLPRPSEVNETILRPLNVEPPLTDLQKSEELIKKEMITMLHYDLLHHPYEPSGNKKG
Sbjct: 541 VQKDLPRPSEVNETILRPLNVEPPLTDLQKSEELIKKEMITMLHYDLLHHPYEPSGNKKG 600
Query: 601 KTVGFGTNNSEHITYLEHNPYEKFSKEELKKAQDVLVQEMEVVKQGMSHGELSSEAYNQV 660
KTVGFGTNNSEHITYLEHNPYEKFSKEELKKAQDVLVQEMEVVKQGMSHGELSSEAYNQV
Sbjct: 601 KTVGFGTNNSEHITYLEHNPYEKFSKEELKKAQDVLVQEMEVVKQGMSHGELSSEAYNQV 660
Query: 661 WEECYSQVLYLPGQSRYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKMKIL 720
WEECYSQVLYLPGQSRYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKMKIL
Sbjct: 661 WEECYSQVLYLPGQSRYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKMKIL 720
Query: 721 LGGYQSRAMGLMKQLNDLWDQIEQAHLELRTFEELKKHEDSAIPRRLECLKEDVQRQQER 780
LGGYQSRAMGLMKQLNDLWDQIEQAHLELRTFEELKKHEDSAIPRRLECLKEDVQRQQER
Sbjct: 721 LGGYQSRAMGLMKQLNDLWDQIEQAHLELRTFEELKKHEDSAIPRRLECLKEDVQRQQER 780
Query: 781 EKELQHRYADLLLEKETLKSKF 802
EKELQHRYADLLLEKETLKSKF
Sbjct: 781 EKELQHRYADLLLEKETLKSKF 802
>gi|239735490 v-myb myeloblastosis viral oncogene homolog isoform 5
[Homo sapiens]
Length = 555
Score = 73.2 bits (178), Expect = 9e-13
Identities = 77/339 (22%), Positives = 130/339 (38%), Gaps = 23/339 (6%)
Query: 9 GVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEE 68
G W ED+ + V KYG +WS IA L + KQC+ RW+ L+P +KKT W+ EE+
Sbjct: 93 GPWTKEEDQRVIELVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEED 152
Query: 69 EKLLHLAKLMPTQWRTIAPII-GRTAAQCLEHYEFLLDKAAQRD---NEEETTDDPRKLK 124
+ K + +W IA ++ GRT H+ + + +++ E P
Sbjct: 153 RIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVEQEGYLQESSKASQPAVAT 212
Query: 125 PGEID---------PNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQ 175
+ + P PA P ++ +SEA+ N A
Sbjct: 213 SFQKNSHLMGFAQAPPTAQLPATGQPTVNNDYSYYHISEAQ----NVSSHVPYPVALHVN 268
Query: 176 LEEARRLAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTSEENYQAL 235
+ + AA +R E +K+ K + + E + + L F +TS N++
Sbjct: 269 IVNVPQPAAAAIQRHYNDEDPEKEKRIKELELLLMSTENELKGQQVLPFLNTS-SNHENS 327
Query: 236 DADFRKLRQQDLDGELRSEKEGRDRKKDKQHLKRKKESDLPSAILQTSGVSEFTKKRSKL 295
D + L L G + R + + K P+ S T K
Sbjct: 328 DLEMPSLTSTPLIGHKLTVTTPFHRDQTVKTQKENTVFRTPAIKRSILESSPRTPTPFKH 387
Query: 296 VLPAPQISDAELQEVVK-----VGQASEIARQTAEESGI 329
L A +I L+ + + V ++ +Q ++ESGI
Sbjct: 388 ALAAQEIKYGPLKMLPQTPSHLVEDLQDVIKQESDESGI 426
Score = 67.0 bits (162), Expect = 7e-11
Identities = 36/110 (32%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Query: 11 WRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEEEK 70
W EDE LK V + G + W IA+ L ++ QC+ RW + L+P + K W++EE+++
Sbjct: 43 WTREEDEKLKKLVEQNGTDDWKVIANYLPNRTDVQCQHRWQKVLNPELIKGPWTKEEDQR 102
Query: 71 LLHLA-KLMPTQWRTIAP-IIGRTAAQCLEHYEFLLDKAAQRDNEEETTD 118
++ L K P +W IA + GR QC E + L+ ++ + E D
Sbjct: 103 VIELVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEED 152
Score = 34.3 bits (77), Expect = 0.47
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 60 KTEWSREEEEKLLHLAKLMPT-QWRTIAPII-GRTAAQCLEHYEFLLD 105
KT W+REE+EKL L + T W+ IA + RT QC ++ +L+
Sbjct: 40 KTRWTREEDEKLKKLVEQNGTDDWKVIANYLPNRTDVQCQHRWQKVLN 87
>gi|239735496 v-myb myeloblastosis viral oncogene homolog isoform 8
[Homo sapiens]
Length = 605
Score = 72.8 bits (177), Expect = 1e-12
Identities = 34/104 (32%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
Query: 9 GVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEE 68
G W ED+ + V KYG +WS IA L + KQC+ RW+ L+P +KKT W+ EE+
Sbjct: 93 GPWTKEEDQRVIELVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEED 152
Query: 69 EKLLHLAKLMPTQWRTIAPII-GRTAAQCLEHYEFLLDKAAQRD 111
+ K + +W IA ++ GRT H+ + + +++
Sbjct: 153 RIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVEQE 196
Score = 67.0 bits (162), Expect = 7e-11
Identities = 36/110 (32%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Query: 11 WRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEEEK 70
W EDE LK V + G + W IA+ L ++ QC+ RW + L+P + K W++EE+++
Sbjct: 43 WTREEDEKLKKLVEQNGTDDWKVIANYLPNRTDVQCQHRWQKVLNPELIKGPWTKEEDQR 102
Query: 71 LLHLA-KLMPTQWRTIAP-IIGRTAAQCLEHYEFLLDKAAQRDNEEETTD 118
++ L K P +W IA + GR QC E + L+ ++ + E D
Sbjct: 103 VIELVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEED 152
Score = 34.3 bits (77), Expect = 0.47
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 60 KTEWSREEEEKLLHLAKLMPT-QWRTIAPII-GRTAAQCLEHYEFLLD 105
KT W+REE+EKL L + T W+ IA + RT QC ++ +L+
Sbjct: 40 KTRWTREEDEKLKKLVEQNGTDDWKVIANYLPNRTDVQCQHRWQKVLN 87
>gi|239735494 v-myb myeloblastosis viral oncogene homolog isoform 7
[Homo sapiens]
Length = 603
Score = 72.8 bits (177), Expect = 1e-12
Identities = 34/104 (32%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
Query: 9 GVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEE 68
G W ED+ + V KYG +WS IA L + KQC+ RW+ L+P +KKT W+ EE+
Sbjct: 93 GPWTKEEDQRVIELVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEED 152
Query: 69 EKLLHLAKLMPTQWRTIAPII-GRTAAQCLEHYEFLLDKAAQRD 111
+ K + +W IA ++ GRT H+ + + +++
Sbjct: 153 RIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVEQE 196
Score = 67.0 bits (162), Expect = 7e-11
Identities = 36/110 (32%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Query: 11 WRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEEEK 70
W EDE LK V + G + W IA+ L ++ QC+ RW + L+P + K W++EE+++
Sbjct: 43 WTREEDEKLKKLVEQNGTDDWKVIANYLPNRTDVQCQHRWQKVLNPELIKGPWTKEEDQR 102
Query: 71 LLHLA-KLMPTQWRTIAP-IIGRTAAQCLEHYEFLLDKAAQRDNEEETTD 118
++ L K P +W IA + GR QC E + L+ ++ + E D
Sbjct: 103 VIELVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEED 152
Score = 34.3 bits (77), Expect = 0.47
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 60 KTEWSREEEEKLLHLAKLMPT-QWRTIAPII-GRTAAQCLEHYEFLLD 105
KT W+REE+EKL L + T W+ IA + RT QC ++ +L+
Sbjct: 40 KTRWTREEDEKLKKLVEQNGTDDWKVIANYLPNRTDVQCQHRWQKVLN 87
>gi|239735492 v-myb myeloblastosis viral oncogene homolog isoform 6
[Homo sapiens]
Length = 745
Score = 72.8 bits (177), Expect = 1e-12
Identities = 34/104 (32%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
Query: 9 GVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEE 68
G W ED+ + V KYG +WS IA L + KQC+ RW+ L+P +KKT W+ EE+
Sbjct: 93 GPWTKEEDQRVIELVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEED 152
Query: 69 EKLLHLAKLMPTQWRTIAPII-GRTAAQCLEHYEFLLDKAAQRD 111
+ K + +W IA ++ GRT H+ + + +++
Sbjct: 153 RIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVEQE 196
Score = 67.0 bits (162), Expect = 7e-11
Identities = 36/110 (32%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Query: 11 WRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEEEK 70
W EDE LK V + G + W IA+ L ++ QC+ RW + L+P + K W++EE+++
Sbjct: 43 WTREEDEKLKKLVEQNGTDDWKVIANYLPNRTDVQCQHRWQKVLNPELIKGPWTKEEDQR 102
Query: 71 LLHLA-KLMPTQWRTIAP-IIGRTAAQCLEHYEFLLDKAAQRDNEEETTD 118
++ L K P +W IA + GR QC E + L+ ++ + E D
Sbjct: 103 VIELVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEED 152
Score = 34.3 bits (77), Expect = 0.47
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 60 KTEWSREEEEKLLHLAKLMPT-QWRTIAPII-GRTAAQCLEHYEFLLD 105
KT W+REE+EKL L + T W+ IA + RT QC ++ +L+
Sbjct: 40 KTRWTREEDEKLKKLVEQNGTDDWKVIANYLPNRTDVQCQHRWQKVLN 87
>gi|239735488 v-myb myeloblastosis viral oncogene homolog isoform 4
[Homo sapiens]
Length = 758
Score = 72.8 bits (177), Expect = 1e-12
Identities = 34/104 (32%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
Query: 9 GVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEE 68
G W ED+ + V KYG +WS IA L + KQC+ RW+ L+P +KKT W+ EE+
Sbjct: 93 GPWTKEEDQRVIELVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEED 152
Query: 69 EKLLHLAKLMPTQWRTIAPII-GRTAAQCLEHYEFLLDKAAQRD 111
+ K + +W IA ++ GRT H+ + + +++
Sbjct: 153 RIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVEQE 196
Score = 67.0 bits (162), Expect = 7e-11
Identities = 36/110 (32%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Query: 11 WRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEEEK 70
W EDE LK V + G + W IA+ L ++ QC+ RW + L+P + K W++EE+++
Sbjct: 43 WTREEDEKLKKLVEQNGTDDWKVIANYLPNRTDVQCQHRWQKVLNPELIKGPWTKEEDQR 102
Query: 71 LLHLA-KLMPTQWRTIAP-IIGRTAAQCLEHYEFLLDKAAQRDNEEETTD 118
++ L K P +W IA + GR QC E + L+ ++ + E D
Sbjct: 103 VIELVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEED 152
Score = 34.3 bits (77), Expect = 0.47
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 60 KTEWSREEEEKLLHLAKLMPT-QWRTIAPII-GRTAAQCLEHYEFLLD 105
KT W+REE+EKL L + T W+ IA + RT QC ++ +L+
Sbjct: 40 KTRWTREEDEKLKKLVEQNGTDDWKVIANYLPNRTDVQCQHRWQKVLN 87
>gi|46361980 v-myb myeloblastosis viral oncogene homolog isoform 2
[Homo sapiens]
Length = 640
Score = 72.8 bits (177), Expect = 1e-12
Identities = 34/104 (32%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
Query: 9 GVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEE 68
G W ED+ + V KYG +WS IA L + KQC+ RW+ L+P +KKT W+ EE+
Sbjct: 93 GPWTKEEDQRVIELVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEED 152
Query: 69 EKLLHLAKLMPTQWRTIAPII-GRTAAQCLEHYEFLLDKAAQRD 111
+ K + +W IA ++ GRT H+ + + +++
Sbjct: 153 RIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVEQE 196
Score = 67.0 bits (162), Expect = 7e-11
Identities = 36/110 (32%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Query: 11 WRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEEEK 70
W EDE LK V + G + W IA+ L ++ QC+ RW + L+P + K W++EE+++
Sbjct: 43 WTREEDEKLKKLVEQNGTDDWKVIANYLPNRTDVQCQHRWQKVLNPELIKGPWTKEEDQR 102
Query: 71 LLHLA-KLMPTQWRTIAP-IIGRTAAQCLEHYEFLLDKAAQRDNEEETTD 118
++ L K P +W IA + GR QC E + L+ ++ + E D
Sbjct: 103 VIELVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEED 152
Score = 34.3 bits (77), Expect = 0.47
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 60 KTEWSREEEEKLLHLAKLMPT-QWRTIAPII-GRTAAQCLEHYEFLLD 105
KT W+REE+EKL L + T W+ IA + RT QC ++ +L+
Sbjct: 40 KTRWTREEDEKLKKLVEQNGTDDWKVIANYLPNRTDVQCQHRWQKVLN 87
>gi|194328729 v-myb myeloblastosis viral oncogene homolog isoform 1
[Homo sapiens]
Length = 761
Score = 72.8 bits (177), Expect = 1e-12
Identities = 34/104 (32%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
Query: 9 GVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEE 68
G W ED+ + V KYG +WS IA L + KQC+ RW+ L+P +KKT W+ EE+
Sbjct: 93 GPWTKEEDQRVIELVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEED 152
Query: 69 EKLLHLAKLMPTQWRTIAPII-GRTAAQCLEHYEFLLDKAAQRD 111
+ K + +W IA ++ GRT H+ + + +++
Sbjct: 153 RIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVEQE 196
Score = 67.0 bits (162), Expect = 7e-11
Identities = 36/110 (32%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Query: 11 WRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEEEK 70
W EDE LK V + G + W IA+ L ++ QC+ RW + L+P + K W++EE+++
Sbjct: 43 WTREEDEKLKKLVEQNGTDDWKVIANYLPNRTDVQCQHRWQKVLNPELIKGPWTKEEDQR 102
Query: 71 LLHLA-KLMPTQWRTIAP-IIGRTAAQCLEHYEFLLDKAAQRDNEEETTD 118
++ L K P +W IA + GR QC E + L+ ++ + E D
Sbjct: 103 VIELVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEED 152
Score = 34.3 bits (77), Expect = 0.47
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 60 KTEWSREEEEKLLHLAKLMPT-QWRTIAPII-GRTAAQCLEHYEFLLD 105
KT W+REE+EKL L + T W+ IA + RT QC ++ +L+
Sbjct: 40 KTRWTREEDEKLKKLVEQNGTDDWKVIANYLPNRTDVQCQHRWQKVLN 87
>gi|194328727 v-myb myeloblastosis viral oncogene homolog isoform 3
[Homo sapiens]
Length = 637
Score = 72.8 bits (177), Expect = 1e-12
Identities = 34/104 (32%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
Query: 9 GVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEE 68
G W ED+ + V KYG +WS IA L + KQC+ RW+ L+P +KKT W+ EE+
Sbjct: 93 GPWTKEEDQRVIELVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEED 152
Query: 69 EKLLHLAKLMPTQWRTIAPII-GRTAAQCLEHYEFLLDKAAQRD 111
+ K + +W IA ++ GRT H+ + + +++
Sbjct: 153 RIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVEQE 196
Score = 67.0 bits (162), Expect = 7e-11
Identities = 36/110 (32%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Query: 11 WRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEEEK 70
W EDE LK V + G + W IA+ L ++ QC+ RW + L+P + K W++EE+++
Sbjct: 43 WTREEDEKLKKLVEQNGTDDWKVIANYLPNRTDVQCQHRWQKVLNPELIKGPWTKEEDQR 102
Query: 71 LLHLA-KLMPTQWRTIAP-IIGRTAAQCLEHYEFLLDKAAQRDNEEETTD 118
++ L K P +W IA + GR QC E + L+ ++ + E D
Sbjct: 103 VIELVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEED 152
Score = 34.3 bits (77), Expect = 0.47
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 60 KTEWSREEEEKLLHLAKLMPT-QWRTIAPII-GRTAAQCLEHYEFLLD 105
KT W+REE+EKL L + T W+ IA + RT QC ++ +L+
Sbjct: 40 KTRWTREEDEKLKKLVEQNGTDDWKVIANYLPNRTDVQCQHRWQKVLN 87
>gi|221139773 v-myb myeloblastosis viral oncogene homolog
(avian)-like 1 isoform 2 [Homo sapiens]
Length = 692
Score = 72.0 bits (175), Expect = 2e-12
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
Query: 9 GVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEE 68
G W ED+ + V KYG +WS IA L + KQC+ RW+ L+P +KK+ W+ EE+
Sbjct: 88 GPWTKEEDQRVIELVQKYGPKRWSLIAKHLKGRIGKQCRERWHNHLNPEVKKSSWTEEED 147
Query: 69 EKLLHLAKLMPTQWRTIAPII-GRTAAQCLEHYEFLLDKAAQRD 111
+ K + +W IA ++ GRT H+ + + +++
Sbjct: 148 RIIYEAHKRLGNRWAEIAKLLPGRTDNSIKNHWNSTMRRKVEQE 191
Score = 70.1 bits (170), Expect = 8e-12
Identities = 37/110 (33%), Positives = 61/110 (55%), Gaps = 2/110 (1%)
Query: 11 WRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEEEK 70
W ED+ LK V ++G + W+ IAS L +S QC+ RW + L+P + K W++EE+++
Sbjct: 38 WTRDEDDKLKKLVEQHGTDDWTLIASHLQNRSDFQCQHRWQKVLNPELIKGPWTKEEDQR 97
Query: 71 LLHLA-KLMPTQWRTIAP-IIGRTAAQCLEHYEFLLDKAAQRDNEEETTD 118
++ L K P +W IA + GR QC E + L+ ++ + E D
Sbjct: 98 VIELVQKYGPKRWSLIAKHLKGRIGKQCRERWHNHLNPEVKKSSWTEEED 147
>gi|122937231 v-myb myeloblastosis viral oncogene homolog
(avian)-like 1 isoform 1 [Homo sapiens]
Length = 752
Score = 72.0 bits (175), Expect = 2e-12
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
Query: 9 GVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEE 68
G W ED+ + V KYG +WS IA L + KQC+ RW+ L+P +KK+ W+ EE+
Sbjct: 88 GPWTKEEDQRVIELVQKYGPKRWSLIAKHLKGRIGKQCRERWHNHLNPEVKKSSWTEEED 147
Query: 69 EKLLHLAKLMPTQWRTIAPII-GRTAAQCLEHYEFLLDKAAQRD 111
+ K + +W IA ++ GRT H+ + + +++
Sbjct: 148 RIIYEAHKRLGNRWAEIAKLLPGRTDNSIKNHWNSTMRRKVEQE 191
Score = 70.1 bits (170), Expect = 8e-12
Identities = 37/110 (33%), Positives = 61/110 (55%), Gaps = 2/110 (1%)
Query: 11 WRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEEEK 70
W ED+ LK V ++G + W+ IAS L +S QC+ RW + L+P + K W++EE+++
Sbjct: 38 WTRDEDDKLKKLVEQHGTDDWTLIASHLQNRSDFQCQHRWQKVLNPELIKGPWTKEEDQR 97
Query: 71 LLHLA-KLMPTQWRTIAP-IIGRTAAQCLEHYEFLLDKAAQRDNEEETTD 118
++ L K P +W IA + GR QC E + L+ ++ + E D
Sbjct: 98 VIELVQKYGPKRWSLIAKHLKGRIGKQCRERWHNHLNPEVKKSSWTEEED 147
>gi|4505293 MYB-related protein B [Homo sapiens]
Length = 700
Score = 71.6 bits (174), Expect = 3e-12
Identities = 107/468 (22%), Positives = 187/468 (39%), Gaps = 90/468 (19%)
Query: 9 GVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEE 68
G W ED+ + V KYG QW+ IA L + KQC+ RW+ L+P +KK+ W+ EE+
Sbjct: 84 GPWTKEEDQKVIELVKKYGTKQWTLIAKHLKGRLGKQCRERWHNHLNPEVKKSCWTEEED 143
Query: 69 EKLLHLAKLMPTQWRTIAPII-GRTAAQCLEHYEFLLDKAAQRDNEEETTDDPRKLKPGE 127
+ K++ +W IA ++ GRT H+ + + G
Sbjct: 144 RIICEAHKVLGNRWAEIAKMLPGRTDNAVKNHWNSTIKRKVDTG--------------GF 189
Query: 128 IDPNPETKPARPDPIDM-DEDELEMLSEARAR---LANTQGKKAKRKAREKQLEEARRLA 183
+ + + KP +++ D+D L+ + L N K E EE LA
Sbjct: 190 LSESKDCKPPVYLLLELEDKDGLQSAQPTEGQGSLLTNWPSVPPTIKEEENSEEE---LA 246
Query: 184 ALQKRRELRAAGIEIQ-----------KKRKRKRGVDYNAEIPFE--------KKPALGF 224
A +E G ++ KR+ + G +P++ PA+G
Sbjct: 247 AATTSKEQEPIGTDLDAVRTPEPLEEFPKREDQEGSPPETSLPYKWVVEAANLLIPAVG- 305
Query: 225 YDTSEENYQALDAD---FRKLRQQDLDGELRSEKEGRDRKKDKQ--HLKRKKESDLPSAI 279
+ E +++D + L + DL E +E + Q H ++ PSA+
Sbjct: 306 -SSLSEALDLIESDPDAWCDLSKFDLPEEPSAEDSINNSLVQLQASHQQQVLPPRQPSAL 364
Query: 280 LQTSGVSEFTKKRSKLVLPAPQISDAELQEVVKVGQASEIA----------------RQT 323
+ + V+E+ + +S + E++ + ++E+ R+
Sbjct: 365 VPS--VTEYRLDGHTI----SDLSRSSRGELIPISPSTEVGGSGIGTPPSVLKRQRKRRV 418
Query: 324 AEESGITNSASSTLLSEYN-VTNNSVALRT-PRTPA-------SQDRILQEAQNLMAL-- 372
A NS S + L N +T S ++T P +P+ QD + E+ +L +
Sbjct: 419 ALSPVTENSTSLSFLDSCNSLTPKSTPVKTLPFSPSQFLNFWNKQDTLELESPSLTSTPV 478
Query: 373 ----TNVDTPLKGGLNTPLHESDFSGVTPQRQ--VVQTPNTVLSTPFR 414
V TPL TPLH+ + VTP ++ + TP+T TPF+
Sbjct: 479 CSQKVVVTTPLHRD-KTPLHQKHAAFVTPDQKYSMDNTPHT--PTPFK 523
Score = 70.5 bits (171), Expect = 6e-12
Identities = 38/109 (34%), Positives = 61/109 (55%), Gaps = 4/109 (3%)
Query: 11 WRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEEEK 70
W + EDE L+A V ++G+ W +AS ++ +QC+ RW L+P + K W++EE++K
Sbjct: 34 WTHEEDEQLRALVRQFGQQDWKFLASHFPNRTDQQCQYRWLRVLNPDLVKGPWTKEEDQK 93
Query: 71 LLHLAKLMPT-QWRTIAP-IIGRTAAQCLEHYEFLLDKAAQRD--NEEE 115
++ L K T QW IA + GR QC E + L+ ++ EEE
Sbjct: 94 VIELVKKYGTKQWTLIAKHLKGRLGKQCRERWHNHLNPEVKKSCWTEEE 142
>gi|92859678 small nuclear RNA activating complex, polypeptide 4,
190kDa [Homo sapiens]
Length = 1469
Score = 62.0 bits (149), Expect = 2e-09
Identities = 36/103 (34%), Positives = 55/103 (53%), Gaps = 2/103 (1%)
Query: 6 IKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSR 65
+K G W ED L AV KYG+ W +I + +S QC+ R+ L S+KK W+
Sbjct: 399 LKKGYWAPEEDAKLLQAVAKYGEQDWFKIREEVPGRSDAQCRDRYLRRLHFSLKKGRWNL 458
Query: 66 EEEEKLLHL-AKLMPTQWRTIA-PIIGRTAAQCLEHYEFLLDK 106
+EEE+L+ L K W IA + R+ +QCL ++ ++ K
Sbjct: 459 KEEEQLIELIEKYGVGHWAKIASELPHRSGSQCLSKWKIMMGK 501
Score = 51.6 bits (122), Expect = 3e-06
Identities = 40/119 (33%), Positives = 56/119 (47%), Gaps = 9/119 (7%)
Query: 6 IKGGVWRNTEDEILKAAV--MKYGKN-QWSRIASLLHRKSAKQCKARWYEWLDPSIKKTE 62
+K W ED +L V M+ G + + RI + + + Q RW + LDP +KK
Sbjct: 344 LKRKEWTEEEDRMLTQLVQEMRVGSHIPYRRIVYYMEGRDSMQLIYRWTKSLDPGLKKGY 403
Query: 63 WSREEEEKLLH-LAKLMPTQWRTI-APIIGRTAAQCLEHY----EFLLDKAAQRDNEEE 115
W+ EE+ KLL +AK W I + GR+ AQC + Y F L K EEE
Sbjct: 404 WAPEEDAKLLQAVAKYGEQDWFKIREEVPGRSDAQCRDRYLRRLHFSLKKGRWNLKEEE 462
Score = 50.1 bits (118), Expect = 8e-06
Identities = 35/100 (35%), Positives = 58/100 (58%), Gaps = 8/100 (8%)
Query: 29 NQWSRIASLLHR--KSAKQCKARWYEWLDPSIKKTEWSREEEEKLLHLAKLM-PTQWRTI 85
+ W +I+++ +SA++ + W PSI K EWSREEEE+L +A +W+ I
Sbjct: 261 HDWEKISNINFEGSRSAEEIRKFWQNSEHPSINKQEWSREEEERLQAIAAAHGHLEWQKI 320
Query: 86 APIIG--RTAAQCLEHYEFLLDKAAQRDNEEETTDDPRKL 123
A +G R+A QCL+ ++ +KA +R +E T ++ R L
Sbjct: 321 AEELGTSRSAFQCLQKFQ-QHNKALKR--KEWTEEEDRML 357
Score = 40.0 bits (92), Expect = 0.009
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 11 WRNTEDEILKAAVMKYGKNQWSRIASLL-HRKSAKQCKARWYEWLDPSIKKTEWSREEEE 69
W E+E L+A +G +W +IA L +SA QC + ++ + ++K+ EW+ EE+
Sbjct: 297 WSREEEERLQAIAAAHGHLEWQKIAEELGTSRSAFQCLQK-FQQHNKALKRKEWTEEEDR 355
Query: 70 KLLHLAKLM 78
L L + M
Sbjct: 356 MLTQLVQEM 364
>gi|55741709 RNA binding motif protein 25 [Homo sapiens]
Length = 843
Score = 49.3 bits (116), Expect = 1e-05
Identities = 40/183 (21%), Positives = 86/183 (46%), Gaps = 21/183 (11%)
Query: 105 DKAAQRDNEEETTDDPRKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQG 164
D ++ +E+ D R+ + P P + I+M+ED+ +++S ++ +T
Sbjct: 230 DSHPRKKKKEKKEDIFRRFPVAPLIPYPLITKEDINAIEMEEDKRDLISREISKFRDTHK 289
Query: 165 K----KAKRKAREKQLEEARRLAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKP 220
K K K++ +++E+ RR ++ RE E +++R+R+R + E E+
Sbjct: 290 KLEEEKGKKEKERQEIEKERRERERERERERERREREREREREREREKEKERERERER-- 347
Query: 221 ALGFYDTSEENYQALDADFRKLRQQDLDGE---------LRSEKEGRDRKKDKQHLKRKK 271
D + + D D + R +D D E RS ++ RDR+++++ +R++
Sbjct: 348 -----DRDRDRTKERDRDRDRERDRDRDRERSSDRNKDRSRSREKSRDRERERER-ERER 401
Query: 272 ESD 274
E +
Sbjct: 402 ERE 404
Score = 47.4 bits (111), Expect = 5e-05
Identities = 61/265 (23%), Positives = 113/265 (42%), Gaps = 23/265 (8%)
Query: 105 DKAAQRDNEEETTDDPRKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQG 164
D+ +R+ E E + + + E + E + R D D E +A R
Sbjct: 390 DREREREREREREREREREREREREREREREREREREKDKKRDREEDEEDAYER------ 443
Query: 165 KKAKRKAREKQLEEARRLA--ALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPAL 222
+K +RK REK+ RL +++R++ R E +++ +R+R + A+ K L
Sbjct: 444 RKLERKLREKEAAYQERLKNWEIRERKKTREYEKEAEREEERRREMAKEAK---RLKEFL 500
Query: 223 GFYDTSEENYQALDADFRKLRQQDLDGELRSEKEGRDRKKDKQHLKRKKESDL------P 276
YD ++ + + R +D + E+ E + RDRK++K+ L+ ++ L P
Sbjct: 501 EDYDDDRDDPKYYRGSALQKRLRDREKEM--EADERDRKREKEELEEIRQRLLAEGHPDP 558
Query: 277 SAILQTSGVSEFTKKRSKLVLPAPQISDAELQEVVKVGQASEIARQTAEESGITNSASST 336
A LQ E ++R + P+ S+ E +E + + E + EE T
Sbjct: 559 DAELQRM-EQEAERRRQPQIKQEPE-SEEEEEEKQEKEEKREEPMEEEEEPEQKPCLKPT 616
Query: 337 L--LSEYNVTNNSVALRTPRTPASQ 359
L +S +++ TP TP +
Sbjct: 617 LRPISSAPSVSSASGNATPNTPGDE 641
Score = 38.5 bits (88), Expect = 0.025
Identities = 38/167 (22%), Positives = 73/167 (43%), Gaps = 6/167 (3%)
Query: 109 QRDNEEETTDDPRKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAK 168
+R+ E E + + K E + E R + D D R R ++ K +
Sbjct: 322 RREREREREREREREKEKERERERERDRDRDRTKERDRDRDRERDRDRDRERSSDRNKDR 381
Query: 169 RKAREKQLEEARRLAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTS 228
++REK + R ++R R E +++R+R+R + E EK +
Sbjct: 382 SRSREKSRDRERE----REREREREREREREREREREREREREREREREKDKKRDREEDE 437
Query: 229 EENYQALDADFRKLRQQDLDGELRSEK-EGRDRKKDKQHLKRKKESD 274
E+ Y+ + RKLR+++ + R + E R+RKK +++ K + +
Sbjct: 438 EDAYERRKLE-RKLREKEAAYQERLKNWEIRERKKTREYEKEAEREE 483
>gi|34878777 ring finger protein 20 [Homo sapiens]
Length = 975
Score = 48.5 bits (114), Expect = 2e-05
Identities = 53/221 (23%), Positives = 99/221 (44%), Gaps = 15/221 (6%)
Query: 110 RDNEEETTDDPRKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKR 169
+ + E+ D+P +LKP D + ++ ++ D +E + + E R R + ++ +
Sbjct: 523 QSSTEDPKDEPAELKPDSEDLSSQSSASKASQEDANEIKSKRDEEERER-ERREKERERE 581
Query: 170 KAREKQLEEARRLAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTSE 229
+ REK+ E R L++ + R + + ++K K G AEI + K L S+
Sbjct: 582 REREKEKEREREKQKLKESEKERDSAKD-KEKGKHDDGRKKEAEIIKQLKIELKKAQESQ 640
Query: 230 ENYQALDADFRKLRQQDLD------GELRSEKEGRDRK------KDKQHLKRKKESDLPS 277
+ + L +R ++ D E +S+ E D + +DK+ + KK +D
Sbjct: 641 KEMKLLLDMYRSAPKEQRDKVQLMAAEKKSKAELEDLRQRLKDLEDKEKKENKKMAD-ED 699
Query: 278 AILQTSGVSEFTKKRSKLVLPAPQISDAELQEVVKVGQASE 318
A+ + V E + K + A Q +A L E+ GQA E
Sbjct: 700 ALRKIRAVEEQIEYLQKKLAMAKQEEEALLSEMDVTGQAFE 740
Score = 31.2 bits (69), Expect = 4.0
Identities = 51/289 (17%), Positives = 126/289 (43%), Gaps = 51/289 (17%)
Query: 105 DKAAQRDNEEETTDDPRKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQG 164
++ +R+ E+E + +KLK E + + + D + E E++ + + L Q
Sbjct: 579 EREREREKEKEREREKQKLKESEKERDSAKDKEKGKHDDGRKKEAEIIKQLKIELKKAQE 638
Query: 165 KKAK--------RKAREKQLEEARRLAALQKRR------ELRAAGIEIQKKRKRKRGVDY 210
+ + R A ++Q ++ + +AA +K + R +E ++K++ K+ D
Sbjct: 639 SQKEMKLLLDMYRSAPKEQRDKVQLMAAEKKSKAELEDLRQRLKDLEDKEKKENKKMADE 698
Query: 211 NA---------EIPF-EKKPALGFYDTSEENYQALDADFRKLRQQDLDGELRSEKEGRDR 260
+A +I + +KK A+ +++ +AL L + D+ G+ + + ++
Sbjct: 699 DALRKIRAVEEQIEYLQKKLAM-----AKQEEEAL------LSEMDVTGQAFEDMQEQNI 747
Query: 261 KKDKQHLKRKKESD--LPSAILQTSGVSEFTKKRSKLVLPAPQISDAELQEVVKVGQASE 318
+ Q L+ K +++ L S ++++ + + K+ + +++D L +V +
Sbjct: 748 RL-MQQLREKDDANFKLMSERIKSNQIHKLLKEEKE------ELADQVLTLKTQVDAQLQ 800
Query: 319 IARQTAEESGITNSASSTLLSEYNVTNNSVALRTPRTPASQDRILQEAQ 367
+ R+ E+ + L S + LRT ++ + ++ AQ
Sbjct: 801 VVRKLEEKEHL-------LQSNIGTGEKELGLRTQALEMNKRKAMEAAQ 842
Score = 30.8 bits (68), Expect = 5.2
Identities = 31/123 (25%), Positives = 57/123 (46%), Gaps = 16/123 (13%)
Query: 693 EKRLEINRGHMTTEAKRAAKMEKKMKILLGGYQS---------RAMGLMK----QLNDLW 739
+K EI + + E K+A + +K+MK+LL Y+S + M K +L DL
Sbjct: 620 KKEAEIIK-QLKIELKKAQESQKEMKLLLDMYRSAPKEQRDKVQLMAAEKKSKAELEDLR 678
Query: 740 DQIEQAHLELRTFEELKKHEDSAIPRRLECLKEDVQRQQEREKELQHRYADLLLEKETLK 799
+++ LE + +E KK D R++ ++E ++ Q++ + LL E +
Sbjct: 679 QRLKD--LEDKEKKENKKMADEDALRKIRAVEEQIEYLQKKLAMAKQEEEALLSEMDVTG 736
Query: 800 SKF 802
F
Sbjct: 737 QAF 739
>gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]
Length = 2817
Score = 46.6 bits (109), Expect = 9e-05
Identities = 48/217 (22%), Positives = 98/217 (45%), Gaps = 26/217 (11%)
Query: 109 QRDNEEETTDDPRKLKPGEIDPNPETKPARPDPIDMDE---DELEMLSEARARLANTQGK 165
+R P+ L P+ + P RP P + DE E+ + R + +
Sbjct: 399 ERGTSSHLPPPPKLLAQQHPPPDRQAVPGRPGPFPSKQQVADEDEIWKQRRRQQSEISA- 457
Query: 166 KAKRKAREKQLEEARRLAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFY 225
A +AR+++ EE RR+ +K AA E K+ K G+ EK+P
Sbjct: 458 -AVERARKRREEEERRMEEQRK-----AACAEKLKRLDEKLGI-------LEKQP----- 499
Query: 226 DTSEENYQALDADFRKLRQQDLDGELRSEKEGRDRKKDKQHLKRKKESDLPSAILQTSGV 285
S E + + + + R+++L+ E E+E ++R+KD++ +++KE +L + +
Sbjct: 500 --SPEEIREREREKEREREKELEKEQEQERE-KEREKDRER-QQEKEKELEKEQEKQREM 555
Query: 286 SEFTKKRSKLVLPAPQISDAELQEVVKVGQASEIARQ 322
+ K+ + L + + ELQ++ + + E+ ++
Sbjct: 556 EKERKQEKEKELERQKEKEKELQKMKEQEKECELEKE 592
Score = 32.3 bits (72), Expect = 1.8
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 496 ENAEKELEEREIDDTYIEDAADVDARKQAIRDAERVKEMKRMHKAVQK-DLPRPSEVNET 554
+ EKELE+ + +E + K+ R E+ KE+++M + ++ +L + E E
Sbjct: 539 QEKEKELEKEQEKQREMEKERKQEKEKELERQKEKEKELQKMKEQEKECELEKEREKLEE 598
Query: 555 ILRPL--NVEPPLTDLQKSEELIKKE 578
+ P N+E P+ + Q+SE KE
Sbjct: 599 KIEPREPNLE-PMVEKQESENSCNKE 623
>gi|58530840 desmoplakin isoform I [Homo sapiens]
Length = 2871
Score = 45.4 bits (106), Expect = 2e-04
Identities = 122/687 (17%), Positives = 265/687 (38%), Gaps = 89/687 (12%)
Query: 159 LANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIEIQKKRKRKRGVD--------- 209
L ++++ AR KQ E K +E+ E Q++ KR+ +
Sbjct: 1295 LKQVMQQRSEDNARHKQSLEEAAKTIQDKNKEIERLKAEFQEEAKRRWEYENELSKVRNN 1354
Query: 210 YNAEIPFEKKPALGFYDTSEENYQALDADFRKLRQQDLDGELRS----EKEGRDRKKDKQ 265
Y+ EI K ++T + +++D G +E R ++ +
Sbjct: 1355 YDEEIISLKNQ----FETEINITKTTIHQLTMQKEEDTSGYRAQIDNLTRENRSLSEEIK 1410
Query: 266 HLK----------RKKESDLPSAILQTSGVSEFTKKRSKLVLPAPQISDAELQEVVKVGQ 315
LK R+ E D+ Q + SE ++++ +L + Q++ +E V+ Q
Sbjct: 1411 RLKNTLTQTTENLRRVEEDIQQ---QKATGSEVSQRKQQLEVELRQVTQMRTEESVRYKQ 1467
Query: 316 ASEIARQTAEESGITNSASSTLLSEYNVTNNSVALRTPRTPASQDRILQEAQNLMALTNV 375
+ + A +T ++ L+ + TN+ L + + + N A +
Sbjct: 1468 SLDDAAKTIQDKNKEIERLKQLIDKE--TNDRKCLEDENARLQRVQYDLQKANSSATETI 1525
Query: 376 DTPLKGGLNTPLHESDFSGVTPQRQVVQTPNTVLSTPFRTPSNGAEGLTPRSGTTPKPVI 435
+ D+ V+ +R V T + + + +
Sbjct: 1526 NKLKVQEQELTRLRIDYERVSQERTVKDQDITRFQNSLKELQLQKQKVEEELNRLKRTAS 1585
Query: 436 NSTPGRTPLRDKLNINPEDGMADYSDPSYVKQMERESREHLRLGLLGLPAPKNDFEIVLP 495
+ R L ++L +GM R S + + + L IV
Sbjct: 1586 EDSCKRKKLEEEL-----EGM-------------RRSLKEQAIKITNLTQQLEQASIVKK 1627
Query: 496 ENAEKELEEREIDDTYIED-----------AADVDA-RKQAIRDAERVKEMKRMHKAVQK 543
+ + ++R++ D ++ + +++V+A R+Q +++ E VK+ ++ QK
Sbjct: 1628 RSEDDLRQQRDVLDGHLREKQRTQEELRRLSSEVEALRRQLLQEQESVKQAHLRNEHFQK 1687
Query: 544 DLPRPSE-VNETILRPLNVEPPLTDLQKSEELIKKEMITM-LHYDLLHHPYEPSGNKKGK 601
+ S +NE+ + ++ +L K ++++E+ + L YD L + + K
Sbjct: 1688 AIEDKSRSLNESKIEIERLQSLTENLTKEHLMLEEELRNLRLEYDDLRRGRSEADSDKNA 1747
Query: 602 TVGFGTNNSEHITYLEHNPYEKFSKE----ELKKAQDVLVQEMEVV-KQGMSHGELSSEA 656
T+ E + L+ + + +L++ ++ L QE+E KQ + E+
Sbjct: 1748 TI------LELRSQLQISNNRTLELQGLINDLQRERENLRQEIEKFQKQALEASNRIQES 1801
Query: 657 YNQVWEECYSQVLYLPGQSRYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKK 716
NQ +QV+ L K R++ LE E+NR T EA E +
Sbjct: 1802 KNQC-----TQVVQERESLLVKIKVLEQDKARLQRLED--ELNRAKSTLEA------ETR 1848
Query: 717 MKILLGGYQSRAMGLMKQLNDLWDQIEQAHLELRTFEELKKHEDSAIPRRLECLKEDVQR 776
+K L + + + Q + + E+A ++ + E + E +++ +E L+ +++R
Sbjct: 1849 VKQRLECEKQQIQNDLNQWKTQYSRKEEAIRKIESEREKSEREKNSLRSEIERLQAEIKR 1908
Query: 777 QQER-EKELQHRYADLLLEKETLKSKF 802
+ER ++L+ + + ET +S++
Sbjct: 1909 IEERCRRKLEDSTRETQSQLETERSRY 1935
>gi|71061468 centromere protein E [Homo sapiens]
Length = 2701
Score = 45.4 bits (106), Expect = 2e-04
Identities = 41/177 (23%), Positives = 85/177 (48%), Gaps = 27/177 (15%)
Query: 626 KEELKKAQDVLVQEMEVVKQGMSH---GELSSEAYNQVWEECYSQVLYLPGQSRYTRANL 682
K++L++ Q+VL E + +K+ + L +E +V C + + R NL
Sbjct: 1444 KDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKVAHCCLKEQEETINE---LRVNL 1500
Query: 683 ASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKMKILLGGYQSRAMGLMKQLNDLWDQI 742
+ K+ I +++K+LE + + + + E++ I KQ++++ +++
Sbjct: 1501 SEKETEISTIQKQLEAINDKLQNKIQEIYEKEEQFNI-------------KQISEVQEKV 1547
Query: 743 EQAHLELRTFEELKKHEDSAIPRRLECLKEDVQRQQEREKELQHRYADLLLEKETLK 799
EL+ F+E +K +DSA+ + E R QE ++E+Q ++ EKE +K
Sbjct: 1548 N----ELKQFKEHRKAKDSALQSIESKMLELTNRLQESQEEIQ----IMIKEKEEMK 1596
Score = 43.1 bits (100), Expect = 0.001
Identities = 66/335 (19%), Positives = 126/335 (37%), Gaps = 34/335 (10%)
Query: 496 ENAEKELEEREIDDTYIEDAADVDARKQAIRDAERVKEMKRMHKAVQKDLPRPSEVNETI 555
EN + EL+ +E+ ++E ++ ++ + E VK + + K V K+L + E
Sbjct: 1161 ENLKNELKNKELTLEHMETER-LELAQKLNENYEEVKSITKERK-VLKELQKSFETERDH 1218
Query: 556 LRPLNVEPPLTDLQKSEELIKKEMITMLHYDLLHHPYEPSGNKKGKTVGFGTNNSEHITY 615
LR E T LQ EEL + H + + K + + H
Sbjct: 1219 LRGYIREIEATGLQTKEELKIAHIHLKEHQETIDELRRSVSEKTAQIINTQDLEKSHTKL 1278
Query: 616 LEHNPYEKFSKEELKKAQDV-----------LVQEMEVVKQGMSHGELSSEAY--NQVWE 662
E P +E L ++V L+ E K + + E N+ ++
Sbjct: 1279 QEEIPVLHEEQELLPNVKEVSETQETMNELELLTEQSTTKDSTTLARIEMERLRLNEKFQ 1338
Query: 663 ECYSQVLYLPGQ------------------SRYTRANLASKKDRIESLEKRLEIN-RGHM 703
E ++ L + + R LA ++ E+ L + + +
Sbjct: 1339 ESQEEIKSLTKERDNLKTIKEALEVKHDQLKEHIRETLAKIQESQSKQEQSLNMKEKDNE 1398
Query: 704 TTEAKRAAKMEKKMKILLGGYQSRAMGLMKQLNDLWDQIEQAHLELRTFEELKKHEDSAI 763
TT+ + K L + +GL K+L + D+++ E + L++ S
Sbjct: 1399 TTKIVSEMEQFKPKDSALLRIEIEMLGLSKRLQESHDEMKSVAKEKDDLQRLQEVLQSES 1458
Query: 764 PRRLECLKEDVQRQQEREKELQHRYADLLLEKETL 798
+ E +KE V + E E+EL+ + L ++ET+
Sbjct: 1459 DQLKENIKEIVAKHLETEEELKVAHCCLKEQEETI 1493
Score = 38.1 bits (87), Expect = 0.033
Identities = 70/340 (20%), Positives = 144/340 (42%), Gaps = 53/340 (15%)
Query: 487 KNDFEIVLPENAEKELEEREIDDTYIEDAADV-------DARKQAIRDAERVKEMKRMHK 539
K + + EN E + + +E+ TY + D+ +A+K+ D E KE++
Sbjct: 638 KRESAFLRSENLELKEKMKELATTYKQMENDIQLYQSQLEAKKKMQVDLE--KELQSAFN 695
Query: 540 AVQKDLPR-PSEVNETILRPLNVEPPLTDLQKS-------EELIKKEMITMLHYDLLHHP 591
+ K +V + +L L +E +TDLQK E +++E+I + L
Sbjct: 696 EITKLTSLIDGKVPKDLLCNLELEGKITDLQKELNKEVEENEALREEVILLSELKSLPSE 755
Query: 592 YEPSGNKKGKTVGFGTNNSEHITYLEHNPYEKFSKEELKKAQ-DVLVQEMEVVKQGMSHG 650
E + K + + SE + + + FS+ K+++ L++E+ K ++
Sbjct: 756 VE----RLRKEI---QDKSEELHIITSEKDKLFSEVVHKESRVQGLLEEIGKTKDDLATT 808
Query: 651 ELSSEAYNQVW----------EECYSQVLYLPGQSRYTRANLASKKDRIESLEKRLEINR 700
+ + ++ +Q + E+ Y VL + NL+ + + +S L+
Sbjct: 809 QSNYKSTDQEFQNFKTLHMDFEQKYKMVLEENERMNQEIVNLSKEAQKFDSSLGALKTEL 868
Query: 701 GHMTTEAKRAAKMEKKMKILLGGYQSRAMGLMKQLNDLWDQIEQAHLELRTFEELKKHED 760
+ T E + EK ++ Q R + ++ L +Q+E L+T E E
Sbjct: 869 SYKTQELQ-----EKTREV-----QER----LNEMEQLKEQLENRDSTLQTVER----EK 910
Query: 761 SAIPRRLECLKEDVQRQQEREKELQHRYADLLLEKETLKS 800
+ I +L+ E+V+ + + +L+ L +E++ LKS
Sbjct: 911 TLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQLKS 950
Score = 32.7 bits (73), Expect = 1.4
Identities = 33/179 (18%), Positives = 80/179 (44%), Gaps = 15/179 (8%)
Query: 625 SKEELKKAQDVLVQEMEVVKQGMSH-----GELSSEAYNQVWEECYSQVLYLPGQSRYTR 679
++EEL+ D L ++ E+V Q +H GELS E ++ Q + +
Sbjct: 1083 NQEELRLLGDELKKQQEIVAQEKNHAIKKEGELSRTCDRLA--EVEEKLKEKSQQLQEKQ 1140
Query: 680 ANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKMKILLGGYQSRAMGLMKQLNDLW 739
L + ++ + ++K++ E + K ++ L ++ + L ++LN+ +
Sbjct: 1141 QQLLNVQEEMSEMQKKI--------NEIENLKNELKNKELTLEHMETERLELAQKLNENY 1192
Query: 740 DQIEQAHLELRTFEELKKHEDSAIPRRLECLKEDVQRQQEREKELQHRYADLLLEKETL 798
++++ E + +EL+K ++ ++E + ++EL+ + L +ET+
Sbjct: 1193 EEVKSITKERKVLKELQKSFETERDHLRGYIREIEATGLQTKEELKIAHIHLKEHQETI 1251
Score = 31.6 bits (70), Expect = 3.1
Identities = 43/185 (23%), Positives = 87/185 (47%), Gaps = 22/185 (11%)
Query: 98 EHYEFLLDKAAQRDNEEETTDDPRKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEAR- 156
E+ E + +RDN ++ KL+ ++ + + AR +LE+ E +
Sbjct: 1879 ENLEEMKSVMKERDNLRRV-EETLKLERDQLKESLQETKAR---------DLEIQQELKT 1928
Query: 157 ARLANTQGKKAKRKAREKQLEEARRLAALQK-----RRELRAAGIEIQKKRKRKRGVDYN 211
AR+ + + K+ K REK E+ +++ +QK + EL+ E+QKK + V +
Sbjct: 1929 ARMLSKEHKETVDKLREKISEKTIQISDIQKDLDKSKDELQKKIQELQKKELQLLRVKED 1988
Query: 212 AEIPFEKKPALGFYDTSEENYQALDADFRKLRQQD--LDGEL-RSEKEGRDRKKDKQHLK 268
+ +K + + ++ ++A + + +R + L +L S +E R K++ L+
Sbjct: 1989 VNMSHKK---INEMEQLKKQFEAQNLSMQSVRMDNFQLTKKLHESLEEIRIVAKERDELR 2045
Query: 269 RKKES 273
R KES
Sbjct: 2046 RIKES 2050
>gi|31982906 cingulin-like 1 [Homo sapiens]
Length = 1302
Score = 45.4 bits (106), Expect = 2e-04
Identities = 98/542 (18%), Positives = 210/542 (38%), Gaps = 79/542 (14%)
Query: 269 RKKESDLPSAILQTSGVSEFTKKRSKLVLPAPQI-SDAELQEVVKVGQASEIARQTAEES 327
R + ++ +L+T G E T V+ AP + + ++ +E VK A+ + + A +
Sbjct: 460 RPPQPNIDGKVLETEGSQEST------VIRAPSLGAQSKKEEEVKTATATLMLQNRATAT 513
Query: 328 GITNSASSTLLSEYNVTNNSVALRTPRTPASQDRILQEAQNLMALTNVDTPLKGGLNTPL 387
+ A + + +N T A+ D +L+ Q L TN +T K L L
Sbjct: 514 SPDSGAKKISVKTFPSASN--------TQATPD-LLKGQQELTQQTNEETA-KQILYNYL 563
Query: 388 HESDFSGVTPQRQVVQTPNTVLSTPFRTPSNGAEGLTPRSGTTPKPVINSTPGRTPLRDK 447
E ++ V + T + A+G +T + + K
Sbjct: 564 KEGSTDNDDATKRKVNLVFEKIQTLKSRAAGSAQGNNQACNST-----SEVKDLLEQKSK 618
Query: 448 LNINPEDGMADYSDPSYVKQMERESREHLRLGLLGLPAPKNDFEIVLPENAEKELEEREI 507
L I + +Q +E RE +R L L + N+ ++ ++ LEE E
Sbjct: 619 LTIEVAELQRQLQLEVKNQQNIKEERERMRANLEELRSQHNE-KVEENSTLQQRLEESEG 677
Query: 508 D-----DTYIEDAADVDARKQAIRDAERVKEMKRMHKAVQ-----KDLPRPSEVNETILR 557
+ + + + + + IRD + ++ MH + +D + + + E +
Sbjct: 678 ELRKNLEELFQVKMEREQHQTEIRDLQ--DQLSEMHDELDSAKRSEDREKGALIEELLQA 735
Query: 558 PLNVEPPLTDLQKSEELIKKEMITMLHYDLLHHPYEPSGNKKGKTVGFGTNNSEHITYLE 617
+++ L ++ E+L++K +T L+
Sbjct: 736 KQDLQDLLIAKEEQEDLLRKR-------------------------------ERELTALK 764
Query: 618 HNPYEKFSKEELKKAQDVLVQEMEVVKQGMSHGELSSEAYNQVWEECYSQVLYLPGQSRY 677
E+ S + QEM+ +K+ + +A + EE V L +S
Sbjct: 765 GALKEEVSSHD---------QEMDKLKEQY---DAELQALRESVEEATKNVEVLASRSNT 812
Query: 678 TRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKMKILLGGYQSRAMGLMKQLND 737
+ + A + R++ L++ E +G +R A+++++++ L G +++A +K+
Sbjct: 813 SEQDQAGTEMRVKLLQEENEKLQGRSEELERRVAQLQRQIEDLKGD-EAKAKETLKKYEG 871
Query: 738 LWDQIEQAHLELRTFEELKKHEDSAIPRRLECLKEDVQRQQEREKELQHRYADLLLEKET 797
Q+E+A + R E+ A+ LE + ++ + + +K+L + + +KE
Sbjct: 872 EIRQLEEALVHARKEEKEAVSARRALENELEAAQGNLSQTTQEQKQLSEKLKEESEQKEQ 931
Query: 798 LK 799
L+
Sbjct: 932 LR 933
Score = 35.0 bits (79), Expect = 0.28
Identities = 31/129 (24%), Positives = 57/129 (44%), Gaps = 19/129 (14%)
Query: 679 RANLASKKDRIESLEKRLEINRGHMTTEAKRA--AKMEKKMKILLGGYQSRAMGLMKQLN 736
R+ K + +L++RLE + G + + KME++ ++
Sbjct: 655 RSQHNEKVEENSTLQQRLEESEGELRKNLEELFQVKMEREQH-------------QTEIR 701
Query: 737 DLWDQIEQAHLELRTFEELKKHEDSAIPRRLECLKEDVQ----RQQEREKELQHRYADLL 792
DL DQ+ + H EL + + + E A+ L K+D+Q ++E+E L+ R +L
Sbjct: 702 DLQDQLSEMHDELDSAKRSEDREKGALIEELLQAKQDLQDLLIAKEEQEDLLRKRERELT 761
Query: 793 LEKETLKSK 801
K LK +
Sbjct: 762 ALKGALKEE 770
>gi|41322923 plectin 1 isoform 11 [Homo sapiens]
Length = 4547
Score = 45.1 bits (105), Expect = 3e-04
Identities = 60/285 (21%), Positives = 110/285 (38%), Gaps = 27/285 (9%)
Query: 91 RTAAQCLEHYEFLLDKAAQRDNEEETTDDPRKLKPGEIDPNPETKPARPDPIDMDEDELE 150
R + + E +D Q+ + +E R+ EI A E+E+
Sbjct: 1396 RMQEEVVRREEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIR 1455
Query: 151 M----LSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIEIQKKRKRKR 206
+ L + +G+ +AR ++ E +R A Q+ E ++ + +RKR+
Sbjct: 1456 VVRLQLEATERQRGGAEGELQALRARAEEAEAQKRQA--QEEAERLRRQVQDESQRKRQA 1513
Query: 207 GVDYNAEIPFEKKPALGFYDTSEENYQALDADFRKLRQQDLDGELRSEKEGRDRKKDKQH 266
V+ + + E + A E +AL A L+ ELR + E +R+ +
Sbjct: 1514 EVELASRVKAEAEAA-------REKQRALQA---------LE-ELRLQAEEAERRLRQAE 1556
Query: 267 LKRKKESDLPSAILQTSGVSEFTKKRSKLVLPAPQISDAELQEVVKVGQ----ASEIARQ 322
++R ++ + Q S +E KR+ Q+ + +E V V Q A A+Q
Sbjct: 1557 VERARQVQVALETAQRSAEAELQSKRASFAEKTAQLERSLQEEHVAVAQLREEAERRAQQ 1616
Query: 323 TAEESGITNSASSTLLSEYNVTNNSVALRTPRTPASQDRILQEAQ 367
AE A L N ++ LR +Q + L +A+
Sbjct: 1617 QAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQAE 1661
Score = 37.4 bits (85), Expect = 0.056
Identities = 137/772 (17%), Positives = 288/772 (37%), Gaps = 105/772 (13%)
Query: 68 EEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLL------DKAAQRDNEEETTDDPR 121
EE+L L K ++ ++ T Q + E +L +KAA E E
Sbjct: 1892 EERLAQLRKASDSELERQKGLVEDTLRQRRQVEEEILALKASFEKAAAGKAELE------ 1945
Query: 122 KLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARR 181
L+ G I N E + +++ L+ R ++ ++ ++ +R
Sbjct: 1946 -LELGRIRSNAEDTLRSKEQAELEAARQRQLAAEEERRRREAEERVQKSLAAEEEAARQR 2004
Query: 182 LAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFR- 240
AAL++ L+A E ++ R+R E++ A E + L A+ +
Sbjct: 2005 KAALEEVERLKAKVEEARRLRERA-----------EQESARQLQLAQEAAQKRLQAEEKA 2053
Query: 241 -----KLRQQDLDGELRSEKEGRDRKKDKQHLKRKKESDLPSAILQTSGVSEFTKKRSKL 295
+ ++Q+L L+ E+ D+ + + R+ + A +Q + ++++ +
Sbjct: 2054 HAFAVQQKEQELQQTLQQEQSVLDQLRGEAEAARRAAEEAEEARVQAEREAAQSRRQVEE 2113
Query: 296 VLPAPQISDAELQEVVKVGQASEIARQTAEESGITNS-ASSTLLSEYNVTNNSVALRTPR 354
Q ++ + Q + A+E R+ AE+ + A L + + A
Sbjct: 2114 AERLKQSAEEQAQARAQAQAAAEKLRKEAEQEAARRAQAEQAALRQKQAAD---AEMEKH 2170
Query: 355 TPASQDRILQEAQNLMALTNVDTPL------KGGLNTPLHESDFSGVTPQRQVVQTPNTV 408
++ + Q+AQ LT + L K L+ L RQ Q +
Sbjct: 2171 KKFAEQTLRQKAQVEQELTTLRLQLEETDHQKNLLDEELQRLKAEATEAARQRSQVEEEL 2230
Query: 409 LSTPFRTPSNGAEGLTPRSGTTPKPVINSTPGRTPLRDKLNINPEDGMADYSDPSYVKQM 468
S R L R + +I LRDK N ++M
Sbjct: 2231 FSV--RVQMEELSKLKARIEAENRALI--------LRDKDN-------TQRFLQEEAEKM 2273
Query: 469 ERESREHLRLGLLGLPAPKNDFEIVLPENAEKEL-EEREIDDTYIEDAADVDARKQAIRD 527
++ + E RL + A + L + AE++L ++R + + +++ + QA+++
Sbjct: 2274 KQVAEEAARLSVAAQEAAR------LRQLAEEDLAQQRALAEKMLKE------KMQAVQE 2321
Query: 528 AERVKE----MKRMHKAVQKDLPRPSEVNETILRPLNVEPP------------LTDLQKS 571
A R+K +++ + Q+ R E E + + L E ++
Sbjct: 2322 ATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLAEETQGFQRTLEAERQRQLEMSAE 2381
Query: 572 EELIKKEMITMLHYDLLHHPYEPSGNKKGKTVGFGTNNSEHITYLE---------HNPYE 622
E +K + M K+ + +G + +E T +
Sbjct: 2382 AERLKLRVAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTELATQEKVTLVQTLEIQRQQS 2441
Query: 623 KFSKEELKKAQDVLVQEMEVVKQGMSHGELSSEAYNQVWEECYSQVLYLPGQSRYTRANL 682
E L++A L +E E ++Q +L SE V +E Q QS + +
Sbjct: 2442 DHDAERLREAIAELEREKEKLQQEAKLLQLKSEEMQTVQQEQLLQETQALQQSFLSEKDS 2501
Query: 683 ASKKDR-IESLEKRLEINRGHMTTEAKRAAKMEKKMKILLGGYQSRAMGLMKQL----ND 737
+++R IE + +LE +A++ + +++ + + + R + M++ ++
Sbjct: 2502 LLQRERFIEQEKAKLEQLFQDEVAKAQQLREEQQRQQQQMEQERQRLVASMEEARRRQHE 2561
Query: 738 LWDQIEQAHLELRTFEELKKHEDSAIPRRLECLKEDVQRQQEREKELQHRYA 789
+ + + EL+ E+ ++ ++ + + L+E +Q +E QHR A
Sbjct: 2562 AEEGVRRKQEELQQLEQQRRQQEELLAEENQRLREQLQLLEE-----QHRAA 2608
Score = 34.3 bits (77), Expect = 0.47
Identities = 43/188 (22%), Positives = 87/188 (46%), Gaps = 16/188 (8%)
Query: 148 ELEMLSEARARLANTQGKKAKRKAR-----EKQLEEARRLAALQKRRELRAAGIEIQKKR 202
E E E R A +GK ++ R E++LE+ R+LA ++ L A I+ +
Sbjct: 1661 EAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQLAEGTAQQRLAAEQELIRLRA 1720
Query: 203 KRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFRKLRQQD---LDGELRSEKEGRD 259
+ ++G + E + + Q L+A+ K+R + L + R+E+E R
Sbjct: 1721 ETEQGEQQRQLLEEELARLQREAAAATQKRQELEAELAKVRAEMEVLLASKARAEEESRS 1780
Query: 260 -RKKDKQHLKRK--KESDLPSAILQTSGVSEFTKKRSKLVL--PAPQISDAE---LQEVV 311
+K KQ L+ + + +L + ++E K++ +L A Q ++AE +++
Sbjct: 1781 TSEKSKQRLEAEAGRFRELAEEAARLRALAEEAKRQRQLAEEDAARQRAEAERVLAEKLA 1840
Query: 312 KVGQASEI 319
+G+A+ +
Sbjct: 1841 AIGEATRL 1848
>gi|41322914 plectin 1 isoform 10 [Homo sapiens]
Length = 4551
Score = 45.1 bits (105), Expect = 3e-04
Identities = 60/285 (21%), Positives = 110/285 (38%), Gaps = 27/285 (9%)
Query: 91 RTAAQCLEHYEFLLDKAAQRDNEEETTDDPRKLKPGEIDPNPETKPARPDPIDMDEDELE 150
R + + E +D Q+ + +E R+ EI A E+E+
Sbjct: 1400 RMQEEVVRREEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIR 1459
Query: 151 M----LSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIEIQKKRKRKR 206
+ L + +G+ +AR ++ E +R A Q+ E ++ + +RKR+
Sbjct: 1460 VVRLQLEATERQRGGAEGELQALRARAEEAEAQKRQA--QEEAERLRRQVQDESQRKRQA 1517
Query: 207 GVDYNAEIPFEKKPALGFYDTSEENYQALDADFRKLRQQDLDGELRSEKEGRDRKKDKQH 266
V+ + + E + A E +AL A L+ ELR + E +R+ +
Sbjct: 1518 EVELASRVKAEAEAA-------REKQRALQA---------LE-ELRLQAEEAERRLRQAE 1560
Query: 267 LKRKKESDLPSAILQTSGVSEFTKKRSKLVLPAPQISDAELQEVVKVGQ----ASEIARQ 322
++R ++ + Q S +E KR+ Q+ + +E V V Q A A+Q
Sbjct: 1561 VERARQVQVALETAQRSAEAELQSKRASFAEKTAQLERSLQEEHVAVAQLREEAERRAQQ 1620
Query: 323 TAEESGITNSASSTLLSEYNVTNNSVALRTPRTPASQDRILQEAQ 367
AE A L N ++ LR +Q + L +A+
Sbjct: 1621 QAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQAE 1665
Score = 37.4 bits (85), Expect = 0.056
Identities = 137/772 (17%), Positives = 288/772 (37%), Gaps = 105/772 (13%)
Query: 68 EEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLL------DKAAQRDNEEETTDDPR 121
EE+L L K ++ ++ T Q + E +L +KAA E E
Sbjct: 1896 EERLAQLRKASDSELERQKGLVEDTLRQRRQVEEEILALKASFEKAAAGKAELE------ 1949
Query: 122 KLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARR 181
L+ G I N E + +++ L+ R ++ ++ ++ +R
Sbjct: 1950 -LELGRIRSNAEDTLRSKEQAELEAARQRQLAAEEERRRREAEERVQKSLAAEEEAARQR 2008
Query: 182 LAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFR- 240
AAL++ L+A E ++ R+R E++ A E + L A+ +
Sbjct: 2009 KAALEEVERLKAKVEEARRLRERA-----------EQESARQLQLAQEAAQKRLQAEEKA 2057
Query: 241 -----KLRQQDLDGELRSEKEGRDRKKDKQHLKRKKESDLPSAILQTSGVSEFTKKRSKL 295
+ ++Q+L L+ E+ D+ + + R+ + A +Q + ++++ +
Sbjct: 2058 HAFAVQQKEQELQQTLQQEQSVLDQLRGEAEAARRAAEEAEEARVQAEREAAQSRRQVEE 2117
Query: 296 VLPAPQISDAELQEVVKVGQASEIARQTAEESGITNS-ASSTLLSEYNVTNNSVALRTPR 354
Q ++ + Q + A+E R+ AE+ + A L + + A
Sbjct: 2118 AERLKQSAEEQAQARAQAQAAAEKLRKEAEQEAARRAQAEQAALRQKQAAD---AEMEKH 2174
Query: 355 TPASQDRILQEAQNLMALTNVDTPL------KGGLNTPLHESDFSGVTPQRQVVQTPNTV 408
++ + Q+AQ LT + L K L+ L RQ Q +
Sbjct: 2175 KKFAEQTLRQKAQVEQELTTLRLQLEETDHQKNLLDEELQRLKAEATEAARQRSQVEEEL 2234
Query: 409 LSTPFRTPSNGAEGLTPRSGTTPKPVINSTPGRTPLRDKLNINPEDGMADYSDPSYVKQM 468
S R L R + +I LRDK N ++M
Sbjct: 2235 FSV--RVQMEELSKLKARIEAENRALI--------LRDKDN-------TQRFLQEEAEKM 2277
Query: 469 ERESREHLRLGLLGLPAPKNDFEIVLPENAEKEL-EEREIDDTYIEDAADVDARKQAIRD 527
++ + E RL + A + L + AE++L ++R + + +++ + QA+++
Sbjct: 2278 KQVAEEAARLSVAAQEAAR------LRQLAEEDLAQQRALAEKMLKE------KMQAVQE 2325
Query: 528 AERVKE----MKRMHKAVQKDLPRPSEVNETILRPLNVEPP------------LTDLQKS 571
A R+K +++ + Q+ R E E + + L E ++
Sbjct: 2326 ATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLAEETQGFQRTLEAERQRQLEMSAE 2385
Query: 572 EELIKKEMITMLHYDLLHHPYEPSGNKKGKTVGFGTNNSEHITYLE---------HNPYE 622
E +K + M K+ + +G + +E T +
Sbjct: 2386 AERLKLRVAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTELATQEKVTLVQTLEIQRQQS 2445
Query: 623 KFSKEELKKAQDVLVQEMEVVKQGMSHGELSSEAYNQVWEECYSQVLYLPGQSRYTRANL 682
E L++A L +E E ++Q +L SE V +E Q QS + +
Sbjct: 2446 DHDAERLREAIAELEREKEKLQQEAKLLQLKSEEMQTVQQEQLLQETQALQQSFLSEKDS 2505
Query: 683 ASKKDR-IESLEKRLEINRGHMTTEAKRAAKMEKKMKILLGGYQSRAMGLMKQL----ND 737
+++R IE + +LE +A++ + +++ + + + R + M++ ++
Sbjct: 2506 LLQRERFIEQEKAKLEQLFQDEVAKAQQLREEQQRQQQQMEQERQRLVASMEEARRRQHE 2565
Query: 738 LWDQIEQAHLELRTFEELKKHEDSAIPRRLECLKEDVQRQQEREKELQHRYA 789
+ + + EL+ E+ ++ ++ + + L+E +Q +E QHR A
Sbjct: 2566 AEEGVRRKQEELQQLEQQRRQQEELLAEENQRLREQLQLLEE-----QHRAA 2612
Score = 34.3 bits (77), Expect = 0.47
Identities = 43/188 (22%), Positives = 87/188 (46%), Gaps = 16/188 (8%)
Query: 148 ELEMLSEARARLANTQGKKAKRKAR-----EKQLEEARRLAALQKRRELRAAGIEIQKKR 202
E E E R A +GK ++ R E++LE+ R+LA ++ L A I+ +
Sbjct: 1665 EAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQLAEGTAQQRLAAEQELIRLRA 1724
Query: 203 KRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFRKLRQQD---LDGELRSEKEGRD 259
+ ++G + E + + Q L+A+ K+R + L + R+E+E R
Sbjct: 1725 ETEQGEQQRQLLEEELARLQREAAAATQKRQELEAELAKVRAEMEVLLASKARAEEESRS 1784
Query: 260 -RKKDKQHLKRK--KESDLPSAILQTSGVSEFTKKRSKLVL--PAPQISDAE---LQEVV 311
+K KQ L+ + + +L + ++E K++ +L A Q ++AE +++
Sbjct: 1785 TSEKSKQRLEAEAGRFRELAEEAARLRALAEEAKRQRQLAEEDAARQRAEAERVLAEKLA 1844
Query: 312 KVGQASEI 319
+G+A+ +
Sbjct: 1845 AIGEATRL 1852
>gi|41322919 plectin 1 isoform 8 [Homo sapiens]
Length = 4547
Score = 45.1 bits (105), Expect = 3e-04
Identities = 60/285 (21%), Positives = 110/285 (38%), Gaps = 27/285 (9%)
Query: 91 RTAAQCLEHYEFLLDKAAQRDNEEETTDDPRKLKPGEIDPNPETKPARPDPIDMDEDELE 150
R + + E +D Q+ + +E R+ EI A E+E+
Sbjct: 1396 RMQEEVVRREEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIR 1455
Query: 151 M----LSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIEIQKKRKRKR 206
+ L + +G+ +AR ++ E +R A Q+ E ++ + +RKR+
Sbjct: 1456 VVRLQLEATERQRGGAEGELQALRARAEEAEAQKRQA--QEEAERLRRQVQDESQRKRQA 1513
Query: 207 GVDYNAEIPFEKKPALGFYDTSEENYQALDADFRKLRQQDLDGELRSEKEGRDRKKDKQH 266
V+ + + E + A E +AL A L+ ELR + E +R+ +
Sbjct: 1514 EVELASRVKAEAEAA-------REKQRALQA---------LE-ELRLQAEEAERRLRQAE 1556
Query: 267 LKRKKESDLPSAILQTSGVSEFTKKRSKLVLPAPQISDAELQEVVKVGQ----ASEIARQ 322
++R ++ + Q S +E KR+ Q+ + +E V V Q A A+Q
Sbjct: 1557 VERARQVQVALETAQRSAEAELQSKRASFAEKTAQLERSLQEEHVAVAQLREEAERRAQQ 1616
Query: 323 TAEESGITNSASSTLLSEYNVTNNSVALRTPRTPASQDRILQEAQ 367
AE A L N ++ LR +Q + L +A+
Sbjct: 1617 QAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQAE 1661
Score = 37.4 bits (85), Expect = 0.056
Identities = 137/772 (17%), Positives = 288/772 (37%), Gaps = 105/772 (13%)
Query: 68 EEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLL------DKAAQRDNEEETTDDPR 121
EE+L L K ++ ++ T Q + E +L +KAA E E
Sbjct: 1892 EERLAQLRKASDSELERQKGLVEDTLRQRRQVEEEILALKASFEKAAAGKAELE------ 1945
Query: 122 KLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARR 181
L+ G I N E + +++ L+ R ++ ++ ++ +R
Sbjct: 1946 -LELGRIRSNAEDTLRSKEQAELEAARQRQLAAEEERRRREAEERVQKSLAAEEEAARQR 2004
Query: 182 LAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFR- 240
AAL++ L+A E ++ R+R E++ A E + L A+ +
Sbjct: 2005 KAALEEVERLKAKVEEARRLRERA-----------EQESARQLQLAQEAAQKRLQAEEKA 2053
Query: 241 -----KLRQQDLDGELRSEKEGRDRKKDKQHLKRKKESDLPSAILQTSGVSEFTKKRSKL 295
+ ++Q+L L+ E+ D+ + + R+ + A +Q + ++++ +
Sbjct: 2054 HAFAVQQKEQELQQTLQQEQSVLDQLRGEAEAARRAAEEAEEARVQAEREAAQSRRQVEE 2113
Query: 296 VLPAPQISDAELQEVVKVGQASEIARQTAEESGITNS-ASSTLLSEYNVTNNSVALRTPR 354
Q ++ + Q + A+E R+ AE+ + A L + + A
Sbjct: 2114 AERLKQSAEEQAQARAQAQAAAEKLRKEAEQEAARRAQAEQAALRQKQAAD---AEMEKH 2170
Query: 355 TPASQDRILQEAQNLMALTNVDTPL------KGGLNTPLHESDFSGVTPQRQVVQTPNTV 408
++ + Q+AQ LT + L K L+ L RQ Q +
Sbjct: 2171 KKFAEQTLRQKAQVEQELTTLRLQLEETDHQKNLLDEELQRLKAEATEAARQRSQVEEEL 2230
Query: 409 LSTPFRTPSNGAEGLTPRSGTTPKPVINSTPGRTPLRDKLNINPEDGMADYSDPSYVKQM 468
S R L R + +I LRDK N ++M
Sbjct: 2231 FSV--RVQMEELSKLKARIEAENRALI--------LRDKDN-------TQRFLQEEAEKM 2273
Query: 469 ERESREHLRLGLLGLPAPKNDFEIVLPENAEKEL-EEREIDDTYIEDAADVDARKQAIRD 527
++ + E RL + A + L + AE++L ++R + + +++ + QA+++
Sbjct: 2274 KQVAEEAARLSVAAQEAAR------LRQLAEEDLAQQRALAEKMLKE------KMQAVQE 2321
Query: 528 AERVKE----MKRMHKAVQKDLPRPSEVNETILRPLNVEPP------------LTDLQKS 571
A R+K +++ + Q+ R E E + + L E ++
Sbjct: 2322 ATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLAEETQGFQRTLEAERQRQLEMSAE 2381
Query: 572 EELIKKEMITMLHYDLLHHPYEPSGNKKGKTVGFGTNNSEHITYLE---------HNPYE 622
E +K + M K+ + +G + +E T +
Sbjct: 2382 AERLKLRVAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTELATQEKVTLVQTLEIQRQQS 2441
Query: 623 KFSKEELKKAQDVLVQEMEVVKQGMSHGELSSEAYNQVWEECYSQVLYLPGQSRYTRANL 682
E L++A L +E E ++Q +L SE V +E Q QS + +
Sbjct: 2442 DHDAERLREAIAELEREKEKLQQEAKLLQLKSEEMQTVQQEQLLQETQALQQSFLSEKDS 2501
Query: 683 ASKKDR-IESLEKRLEINRGHMTTEAKRAAKMEKKMKILLGGYQSRAMGLMKQL----ND 737
+++R IE + +LE +A++ + +++ + + + R + M++ ++
Sbjct: 2502 LLQRERFIEQEKAKLEQLFQDEVAKAQQLREEQQRQQQQMEQERQRLVASMEEARRRQHE 2561
Query: 738 LWDQIEQAHLELRTFEELKKHEDSAIPRRLECLKEDVQRQQEREKELQHRYA 789
+ + + EL+ E+ ++ ++ + + L+E +Q +E QHR A
Sbjct: 2562 AEEGVRRKQEELQQLEQQRRQQEELLAEENQRLREQLQLLEE-----QHRAA 2608
Score = 34.3 bits (77), Expect = 0.47
Identities = 43/188 (22%), Positives = 87/188 (46%), Gaps = 16/188 (8%)
Query: 148 ELEMLSEARARLANTQGKKAKRKAR-----EKQLEEARRLAALQKRRELRAAGIEIQKKR 202
E E E R A +GK ++ R E++LE+ R+LA ++ L A I+ +
Sbjct: 1661 EAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQLAEGTAQQRLAAEQELIRLRA 1720
Query: 203 KRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFRKLRQQD---LDGELRSEKEGRD 259
+ ++G + E + + Q L+A+ K+R + L + R+E+E R
Sbjct: 1721 ETEQGEQQRQLLEEELARLQREAAAATQKRQELEAELAKVRAEMEVLLASKARAEEESRS 1780
Query: 260 -RKKDKQHLKRK--KESDLPSAILQTSGVSEFTKKRSKLVL--PAPQISDAE---LQEVV 311
+K KQ L+ + + +L + ++E K++ +L A Q ++AE +++
Sbjct: 1781 TSEKSKQRLEAEAGRFRELAEEAARLRALAEEAKRQRQLAEEDAARQRAEAERVLAEKLA 1840
Query: 312 KVGQASEI 319
+G+A+ +
Sbjct: 1841 AIGEATRL 1848
>gi|41322910 plectin 1 isoform 7 [Homo sapiens]
Length = 4515
Score = 45.1 bits (105), Expect = 3e-04
Identities = 60/285 (21%), Positives = 110/285 (38%), Gaps = 27/285 (9%)
Query: 91 RTAAQCLEHYEFLLDKAAQRDNEEETTDDPRKLKPGEIDPNPETKPARPDPIDMDEDELE 150
R + + E +D Q+ + +E R+ EI A E+E+
Sbjct: 1364 RMQEEVVRREEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIR 1423
Query: 151 M----LSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIEIQKKRKRKR 206
+ L + +G+ +AR ++ E +R A Q+ E ++ + +RKR+
Sbjct: 1424 VVRLQLEATERQRGGAEGELQALRARAEEAEAQKRQA--QEEAERLRRQVQDESQRKRQA 1481
Query: 207 GVDYNAEIPFEKKPALGFYDTSEENYQALDADFRKLRQQDLDGELRSEKEGRDRKKDKQH 266
V+ + + E + A E +AL A L+ ELR + E +R+ +
Sbjct: 1482 EVELASRVKAEAEAA-------REKQRALQA---------LE-ELRLQAEEAERRLRQAE 1524
Query: 267 LKRKKESDLPSAILQTSGVSEFTKKRSKLVLPAPQISDAELQEVVKVGQ----ASEIARQ 322
++R ++ + Q S +E KR+ Q+ + +E V V Q A A+Q
Sbjct: 1525 VERARQVQVALETAQRSAEAELQSKRASFAEKTAQLERSLQEEHVAVAQLREEAERRAQQ 1584
Query: 323 TAEESGITNSASSTLLSEYNVTNNSVALRTPRTPASQDRILQEAQ 367
AE A L N ++ LR +Q + L +A+
Sbjct: 1585 QAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQAE 1629
Score = 37.4 bits (85), Expect = 0.056
Identities = 137/772 (17%), Positives = 288/772 (37%), Gaps = 105/772 (13%)
Query: 68 EEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLL------DKAAQRDNEEETTDDPR 121
EE+L L K ++ ++ T Q + E +L +KAA E E
Sbjct: 1860 EERLAQLRKASDSELERQKGLVEDTLRQRRQVEEEILALKASFEKAAAGKAELE------ 1913
Query: 122 KLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARR 181
L+ G I N E + +++ L+ R ++ ++ ++ +R
Sbjct: 1914 -LELGRIRSNAEDTLRSKEQAELEAARQRQLAAEEERRRREAEERVQKSLAAEEEAARQR 1972
Query: 182 LAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFR- 240
AAL++ L+A E ++ R+R E++ A E + L A+ +
Sbjct: 1973 KAALEEVERLKAKVEEARRLRERA-----------EQESARQLQLAQEAAQKRLQAEEKA 2021
Query: 241 -----KLRQQDLDGELRSEKEGRDRKKDKQHLKRKKESDLPSAILQTSGVSEFTKKRSKL 295
+ ++Q+L L+ E+ D+ + + R+ + A +Q + ++++ +
Sbjct: 2022 HAFAVQQKEQELQQTLQQEQSVLDQLRGEAEAARRAAEEAEEARVQAEREAAQSRRQVEE 2081
Query: 296 VLPAPQISDAELQEVVKVGQASEIARQTAEESGITNS-ASSTLLSEYNVTNNSVALRTPR 354
Q ++ + Q + A+E R+ AE+ + A L + + A
Sbjct: 2082 AERLKQSAEEQAQARAQAQAAAEKLRKEAEQEAARRAQAEQAALRQKQAAD---AEMEKH 2138
Query: 355 TPASQDRILQEAQNLMALTNVDTPL------KGGLNTPLHESDFSGVTPQRQVVQTPNTV 408
++ + Q+AQ LT + L K L+ L RQ Q +
Sbjct: 2139 KKFAEQTLRQKAQVEQELTTLRLQLEETDHQKNLLDEELQRLKAEATEAARQRSQVEEEL 2198
Query: 409 LSTPFRTPSNGAEGLTPRSGTTPKPVINSTPGRTPLRDKLNINPEDGMADYSDPSYVKQM 468
S R L R + +I LRDK N ++M
Sbjct: 2199 FSV--RVQMEELSKLKARIEAENRALI--------LRDKDN-------TQRFLQEEAEKM 2241
Query: 469 ERESREHLRLGLLGLPAPKNDFEIVLPENAEKEL-EEREIDDTYIEDAADVDARKQAIRD 527
++ + E RL + A + L + AE++L ++R + + +++ + QA+++
Sbjct: 2242 KQVAEEAARLSVAAQEAAR------LRQLAEEDLAQQRALAEKMLKE------KMQAVQE 2289
Query: 528 AERVKE----MKRMHKAVQKDLPRPSEVNETILRPLNVEPP------------LTDLQKS 571
A R+K +++ + Q+ R E E + + L E ++
Sbjct: 2290 ATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLAEETQGFQRTLEAERQRQLEMSAE 2349
Query: 572 EELIKKEMITMLHYDLLHHPYEPSGNKKGKTVGFGTNNSEHITYLE---------HNPYE 622
E +K + M K+ + +G + +E T +
Sbjct: 2350 AERLKLRVAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTELATQEKVTLVQTLEIQRQQS 2409
Query: 623 KFSKEELKKAQDVLVQEMEVVKQGMSHGELSSEAYNQVWEECYSQVLYLPGQSRYTRANL 682
E L++A L +E E ++Q +L SE V +E Q QS + +
Sbjct: 2410 DHDAERLREAIAELEREKEKLQQEAKLLQLKSEEMQTVQQEQLLQETQALQQSFLSEKDS 2469
Query: 683 ASKKDR-IESLEKRLEINRGHMTTEAKRAAKMEKKMKILLGGYQSRAMGLMKQL----ND 737
+++R IE + +LE +A++ + +++ + + + R + M++ ++
Sbjct: 2470 LLQRERFIEQEKAKLEQLFQDEVAKAQQLREEQQRQQQQMEQERQRLVASMEEARRRQHE 2529
Query: 738 LWDQIEQAHLELRTFEELKKHEDSAIPRRLECLKEDVQRQQEREKELQHRYA 789
+ + + EL+ E+ ++ ++ + + L+E +Q +E QHR A
Sbjct: 2530 AEEGVRRKQEELQQLEQQRRQQEELLAEENQRLREQLQLLEE-----QHRAA 2576
Score = 34.3 bits (77), Expect = 0.47
Identities = 43/188 (22%), Positives = 87/188 (46%), Gaps = 16/188 (8%)
Query: 148 ELEMLSEARARLANTQGKKAKRKAR-----EKQLEEARRLAALQKRRELRAAGIEIQKKR 202
E E E R A +GK ++ R E++LE+ R+LA ++ L A I+ +
Sbjct: 1629 EAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQLAEGTAQQRLAAEQELIRLRA 1688
Query: 203 KRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFRKLRQQD---LDGELRSEKEGRD 259
+ ++G + E + + Q L+A+ K+R + L + R+E+E R
Sbjct: 1689 ETEQGEQQRQLLEEELARLQREAAAATQKRQELEAELAKVRAEMEVLLASKARAEEESRS 1748
Query: 260 -RKKDKQHLKRK--KESDLPSAILQTSGVSEFTKKRSKLVL--PAPQISDAE---LQEVV 311
+K KQ L+ + + +L + ++E K++ +L A Q ++AE +++
Sbjct: 1749 TSEKSKQRLEAEAGRFRELAEEAARLRALAEEAKRQRQLAEEDAARQRAEAERVLAEKLA 1808
Query: 312 KVGQASEI 319
+G+A+ +
Sbjct: 1809 AIGEATRL 1816
>gi|41322916 plectin 1 isoform 6 [Homo sapiens]
Length = 4684
Score = 45.1 bits (105), Expect = 3e-04
Identities = 60/285 (21%), Positives = 110/285 (38%), Gaps = 27/285 (9%)
Query: 91 RTAAQCLEHYEFLLDKAAQRDNEEETTDDPRKLKPGEIDPNPETKPARPDPIDMDEDELE 150
R + + E +D Q+ + +E R+ EI A E+E+
Sbjct: 1533 RMQEEVVRREEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIR 1592
Query: 151 M----LSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIEIQKKRKRKR 206
+ L + +G+ +AR ++ E +R A Q+ E ++ + +RKR+
Sbjct: 1593 VVRLQLEATERQRGGAEGELQALRARAEEAEAQKRQA--QEEAERLRRQVQDESQRKRQA 1650
Query: 207 GVDYNAEIPFEKKPALGFYDTSEENYQALDADFRKLRQQDLDGELRSEKEGRDRKKDKQH 266
V+ + + E + A E +AL A L+ ELR + E +R+ +
Sbjct: 1651 EVELASRVKAEAEAA-------REKQRALQA---------LE-ELRLQAEEAERRLRQAE 1693
Query: 267 LKRKKESDLPSAILQTSGVSEFTKKRSKLVLPAPQISDAELQEVVKVGQ----ASEIARQ 322
++R ++ + Q S +E KR+ Q+ + +E V V Q A A+Q
Sbjct: 1694 VERARQVQVALETAQRSAEAELQSKRASFAEKTAQLERSLQEEHVAVAQLREEAERRAQQ 1753
Query: 323 TAEESGITNSASSTLLSEYNVTNNSVALRTPRTPASQDRILQEAQ 367
AE A L N ++ LR +Q + L +A+
Sbjct: 1754 QAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQAE 1798
Score = 37.4 bits (85), Expect = 0.056
Identities = 137/772 (17%), Positives = 288/772 (37%), Gaps = 105/772 (13%)
Query: 68 EEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLL------DKAAQRDNEEETTDDPR 121
EE+L L K ++ ++ T Q + E +L +KAA E E
Sbjct: 2029 EERLAQLRKASDSELERQKGLVEDTLRQRRQVEEEILALKASFEKAAAGKAELE------ 2082
Query: 122 KLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARR 181
L+ G I N E + +++ L+ R ++ ++ ++ +R
Sbjct: 2083 -LELGRIRSNAEDTLRSKEQAELEAARQRQLAAEEERRRREAEERVQKSLAAEEEAARQR 2141
Query: 182 LAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFR- 240
AAL++ L+A E ++ R+R E++ A E + L A+ +
Sbjct: 2142 KAALEEVERLKAKVEEARRLRERA-----------EQESARQLQLAQEAAQKRLQAEEKA 2190
Query: 241 -----KLRQQDLDGELRSEKEGRDRKKDKQHLKRKKESDLPSAILQTSGVSEFTKKRSKL 295
+ ++Q+L L+ E+ D+ + + R+ + A +Q + ++++ +
Sbjct: 2191 HAFAVQQKEQELQQTLQQEQSVLDQLRGEAEAARRAAEEAEEARVQAEREAAQSRRQVEE 2250
Query: 296 VLPAPQISDAELQEVVKVGQASEIARQTAEESGITNS-ASSTLLSEYNVTNNSVALRTPR 354
Q ++ + Q + A+E R+ AE+ + A L + + A
Sbjct: 2251 AERLKQSAEEQAQARAQAQAAAEKLRKEAEQEAARRAQAEQAALRQKQAAD---AEMEKH 2307
Query: 355 TPASQDRILQEAQNLMALTNVDTPL------KGGLNTPLHESDFSGVTPQRQVVQTPNTV 408
++ + Q+AQ LT + L K L+ L RQ Q +
Sbjct: 2308 KKFAEQTLRQKAQVEQELTTLRLQLEETDHQKNLLDEELQRLKAEATEAARQRSQVEEEL 2367
Query: 409 LSTPFRTPSNGAEGLTPRSGTTPKPVINSTPGRTPLRDKLNINPEDGMADYSDPSYVKQM 468
S R L R + +I LRDK N ++M
Sbjct: 2368 FSV--RVQMEELSKLKARIEAENRALI--------LRDKDN-------TQRFLQEEAEKM 2410
Query: 469 ERESREHLRLGLLGLPAPKNDFEIVLPENAEKEL-EEREIDDTYIEDAADVDARKQAIRD 527
++ + E RL + A + L + AE++L ++R + + +++ + QA+++
Sbjct: 2411 KQVAEEAARLSVAAQEAAR------LRQLAEEDLAQQRALAEKMLKE------KMQAVQE 2458
Query: 528 AERVKE----MKRMHKAVQKDLPRPSEVNETILRPLNVEPP------------LTDLQKS 571
A R+K +++ + Q+ R E E + + L E ++
Sbjct: 2459 ATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLAEETQGFQRTLEAERQRQLEMSAE 2518
Query: 572 EELIKKEMITMLHYDLLHHPYEPSGNKKGKTVGFGTNNSEHITYLE---------HNPYE 622
E +K + M K+ + +G + +E T +
Sbjct: 2519 AERLKLRVAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTELATQEKVTLVQTLEIQRQQS 2578
Query: 623 KFSKEELKKAQDVLVQEMEVVKQGMSHGELSSEAYNQVWEECYSQVLYLPGQSRYTRANL 682
E L++A L +E E ++Q +L SE V +E Q QS + +
Sbjct: 2579 DHDAERLREAIAELEREKEKLQQEAKLLQLKSEEMQTVQQEQLLQETQALQQSFLSEKDS 2638
Query: 683 ASKKDR-IESLEKRLEINRGHMTTEAKRAAKMEKKMKILLGGYQSRAMGLMKQL----ND 737
+++R IE + +LE +A++ + +++ + + + R + M++ ++
Sbjct: 2639 LLQRERFIEQEKAKLEQLFQDEVAKAQQLREEQQRQQQQMEQERQRLVASMEEARRRQHE 2698
Query: 738 LWDQIEQAHLELRTFEELKKHEDSAIPRRLECLKEDVQRQQEREKELQHRYA 789
+ + + EL+ E+ ++ ++ + + L+E +Q +E QHR A
Sbjct: 2699 AEEGVRRKQEELQQLEQQRRQQEELLAEENQRLREQLQLLEE-----QHRAA 2745
Score = 34.3 bits (77), Expect = 0.47
Identities = 43/188 (22%), Positives = 87/188 (46%), Gaps = 16/188 (8%)
Query: 148 ELEMLSEARARLANTQGKKAKRKAR-----EKQLEEARRLAALQKRRELRAAGIEIQKKR 202
E E E R A +GK ++ R E++LE+ R+LA ++ L A I+ +
Sbjct: 1798 EAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQLAEGTAQQRLAAEQELIRLRA 1857
Query: 203 KRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFRKLRQQD---LDGELRSEKEGRD 259
+ ++G + E + + Q L+A+ K+R + L + R+E+E R
Sbjct: 1858 ETEQGEQQRQLLEEELARLQREAAAATQKRQELEAELAKVRAEMEVLLASKARAEEESRS 1917
Query: 260 -RKKDKQHLKRK--KESDLPSAILQTSGVSEFTKKRSKLVL--PAPQISDAE---LQEVV 311
+K KQ L+ + + +L + ++E K++ +L A Q ++AE +++
Sbjct: 1918 TSEKSKQRLEAEAGRFRELAEEAARLRALAEEAKRQRQLAEEDAARQRAEAERVLAEKLA 1977
Query: 312 KVGQASEI 319
+G+A+ +
Sbjct: 1978 AIGEATRL 1985
>gi|41322908 plectin 1 isoform 3 [Homo sapiens]
Length = 4525
Score = 45.1 bits (105), Expect = 3e-04
Identities = 60/285 (21%), Positives = 110/285 (38%), Gaps = 27/285 (9%)
Query: 91 RTAAQCLEHYEFLLDKAAQRDNEEETTDDPRKLKPGEIDPNPETKPARPDPIDMDEDELE 150
R + + E +D Q+ + +E R+ EI A E+E+
Sbjct: 1374 RMQEEVVRREEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIR 1433
Query: 151 M----LSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIEIQKKRKRKR 206
+ L + +G+ +AR ++ E +R A Q+ E ++ + +RKR+
Sbjct: 1434 VVRLQLEATERQRGGAEGELQALRARAEEAEAQKRQA--QEEAERLRRQVQDESQRKRQA 1491
Query: 207 GVDYNAEIPFEKKPALGFYDTSEENYQALDADFRKLRQQDLDGELRSEKEGRDRKKDKQH 266
V+ + + E + A E +AL A L+ ELR + E +R+ +
Sbjct: 1492 EVELASRVKAEAEAA-------REKQRALQA---------LE-ELRLQAEEAERRLRQAE 1534
Query: 267 LKRKKESDLPSAILQTSGVSEFTKKRSKLVLPAPQISDAELQEVVKVGQ----ASEIARQ 322
++R ++ + Q S +E KR+ Q+ + +E V V Q A A+Q
Sbjct: 1535 VERARQVQVALETAQRSAEAELQSKRASFAEKTAQLERSLQEEHVAVAQLREEAERRAQQ 1594
Query: 323 TAEESGITNSASSTLLSEYNVTNNSVALRTPRTPASQDRILQEAQ 367
AE A L N ++ LR +Q + L +A+
Sbjct: 1595 QAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQAE 1639
Score = 37.4 bits (85), Expect = 0.056
Identities = 137/772 (17%), Positives = 288/772 (37%), Gaps = 105/772 (13%)
Query: 68 EEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLL------DKAAQRDNEEETTDDPR 121
EE+L L K ++ ++ T Q + E +L +KAA E E
Sbjct: 1870 EERLAQLRKASDSELERQKGLVEDTLRQRRQVEEEILALKASFEKAAAGKAELE------ 1923
Query: 122 KLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARR 181
L+ G I N E + +++ L+ R ++ ++ ++ +R
Sbjct: 1924 -LELGRIRSNAEDTLRSKEQAELEAARQRQLAAEEERRRREAEERVQKSLAAEEEAARQR 1982
Query: 182 LAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFR- 240
AAL++ L+A E ++ R+R E++ A E + L A+ +
Sbjct: 1983 KAALEEVERLKAKVEEARRLRERA-----------EQESARQLQLAQEAAQKRLQAEEKA 2031
Query: 241 -----KLRQQDLDGELRSEKEGRDRKKDKQHLKRKKESDLPSAILQTSGVSEFTKKRSKL 295
+ ++Q+L L+ E+ D+ + + R+ + A +Q + ++++ +
Sbjct: 2032 HAFAVQQKEQELQQTLQQEQSVLDQLRGEAEAARRAAEEAEEARVQAEREAAQSRRQVEE 2091
Query: 296 VLPAPQISDAELQEVVKVGQASEIARQTAEESGITNS-ASSTLLSEYNVTNNSVALRTPR 354
Q ++ + Q + A+E R+ AE+ + A L + + A
Sbjct: 2092 AERLKQSAEEQAQARAQAQAAAEKLRKEAEQEAARRAQAEQAALRQKQAAD---AEMEKH 2148
Query: 355 TPASQDRILQEAQNLMALTNVDTPL------KGGLNTPLHESDFSGVTPQRQVVQTPNTV 408
++ + Q+AQ LT + L K L+ L RQ Q +
Sbjct: 2149 KKFAEQTLRQKAQVEQELTTLRLQLEETDHQKNLLDEELQRLKAEATEAARQRSQVEEEL 2208
Query: 409 LSTPFRTPSNGAEGLTPRSGTTPKPVINSTPGRTPLRDKLNINPEDGMADYSDPSYVKQM 468
S R L R + +I LRDK N ++M
Sbjct: 2209 FSV--RVQMEELSKLKARIEAENRALI--------LRDKDN-------TQRFLQEEAEKM 2251
Query: 469 ERESREHLRLGLLGLPAPKNDFEIVLPENAEKEL-EEREIDDTYIEDAADVDARKQAIRD 527
++ + E RL + A + L + AE++L ++R + + +++ + QA+++
Sbjct: 2252 KQVAEEAARLSVAAQEAAR------LRQLAEEDLAQQRALAEKMLKE------KMQAVQE 2299
Query: 528 AERVKE----MKRMHKAVQKDLPRPSEVNETILRPLNVEPP------------LTDLQKS 571
A R+K +++ + Q+ R E E + + L E ++
Sbjct: 2300 ATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLAEETQGFQRTLEAERQRQLEMSAE 2359
Query: 572 EELIKKEMITMLHYDLLHHPYEPSGNKKGKTVGFGTNNSEHITYLE---------HNPYE 622
E +K + M K+ + +G + +E T +
Sbjct: 2360 AERLKLRVAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTELATQEKVTLVQTLEIQRQQS 2419
Query: 623 KFSKEELKKAQDVLVQEMEVVKQGMSHGELSSEAYNQVWEECYSQVLYLPGQSRYTRANL 682
E L++A L +E E ++Q +L SE V +E Q QS + +
Sbjct: 2420 DHDAERLREAIAELEREKEKLQQEAKLLQLKSEEMQTVQQEQLLQETQALQQSFLSEKDS 2479
Query: 683 ASKKDR-IESLEKRLEINRGHMTTEAKRAAKMEKKMKILLGGYQSRAMGLMKQL----ND 737
+++R IE + +LE +A++ + +++ + + + R + M++ ++
Sbjct: 2480 LLQRERFIEQEKAKLEQLFQDEVAKAQQLREEQQRQQQQMEQERQRLVASMEEARRRQHE 2539
Query: 738 LWDQIEQAHLELRTFEELKKHEDSAIPRRLECLKEDVQRQQEREKELQHRYA 789
+ + + EL+ E+ ++ ++ + + L+E +Q +E QHR A
Sbjct: 2540 AEEGVRRKQEELQQLEQQRRQQEELLAEENQRLREQLQLLEE-----QHRAA 2586
Score = 34.3 bits (77), Expect = 0.47
Identities = 43/188 (22%), Positives = 87/188 (46%), Gaps = 16/188 (8%)
Query: 148 ELEMLSEARARLANTQGKKAKRKAR-----EKQLEEARRLAALQKRRELRAAGIEIQKKR 202
E E E R A +GK ++ R E++LE+ R+LA ++ L A I+ +
Sbjct: 1639 EAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQLAEGTAQQRLAAEQELIRLRA 1698
Query: 203 KRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFRKLRQQD---LDGELRSEKEGRD 259
+ ++G + E + + Q L+A+ K+R + L + R+E+E R
Sbjct: 1699 ETEQGEQQRQLLEEELARLQREAAAATQKRQELEAELAKVRAEMEVLLASKARAEEESRS 1758
Query: 260 -RKKDKQHLKRK--KESDLPSAILQTSGVSEFTKKRSKLVL--PAPQISDAE---LQEVV 311
+K KQ L+ + + +L + ++E K++ +L A Q ++AE +++
Sbjct: 1759 TSEKSKQRLEAEAGRFRELAEEAARLRALAEEAKRQRQLAEEDAARQRAEAERVLAEKLA 1818
Query: 312 KVGQASEI 319
+G+A+ +
Sbjct: 1819 AIGEATRL 1826
>gi|41322912 plectin 1 isoform 2 [Homo sapiens]
Length = 4533
Score = 45.1 bits (105), Expect = 3e-04
Identities = 60/285 (21%), Positives = 110/285 (38%), Gaps = 27/285 (9%)
Query: 91 RTAAQCLEHYEFLLDKAAQRDNEEETTDDPRKLKPGEIDPNPETKPARPDPIDMDEDELE 150
R + + E +D Q+ + +E R+ EI A E+E+
Sbjct: 1382 RMQEEVVRREEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIR 1441
Query: 151 M----LSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIEIQKKRKRKR 206
+ L + +G+ +AR ++ E +R A Q+ E ++ + +RKR+
Sbjct: 1442 VVRLQLEATERQRGGAEGELQALRARAEEAEAQKRQA--QEEAERLRRQVQDESQRKRQA 1499
Query: 207 GVDYNAEIPFEKKPALGFYDTSEENYQALDADFRKLRQQDLDGELRSEKEGRDRKKDKQH 266
V+ + + E + A E +AL A L+ ELR + E +R+ +
Sbjct: 1500 EVELASRVKAEAEAA-------REKQRALQA---------LE-ELRLQAEEAERRLRQAE 1542
Query: 267 LKRKKESDLPSAILQTSGVSEFTKKRSKLVLPAPQISDAELQEVVKVGQ----ASEIARQ 322
++R ++ + Q S +E KR+ Q+ + +E V V Q A A+Q
Sbjct: 1543 VERARQVQVALETAQRSAEAELQSKRASFAEKTAQLERSLQEEHVAVAQLREEAERRAQQ 1602
Query: 323 TAEESGITNSASSTLLSEYNVTNNSVALRTPRTPASQDRILQEAQ 367
AE A L N ++ LR +Q + L +A+
Sbjct: 1603 QAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQAE 1647
Score = 37.4 bits (85), Expect = 0.056
Identities = 137/772 (17%), Positives = 288/772 (37%), Gaps = 105/772 (13%)
Query: 68 EEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLL------DKAAQRDNEEETTDDPR 121
EE+L L K ++ ++ T Q + E +L +KAA E E
Sbjct: 1878 EERLAQLRKASDSELERQKGLVEDTLRQRRQVEEEILALKASFEKAAAGKAELE------ 1931
Query: 122 KLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARR 181
L+ G I N E + +++ L+ R ++ ++ ++ +R
Sbjct: 1932 -LELGRIRSNAEDTLRSKEQAELEAARQRQLAAEEERRRREAEERVQKSLAAEEEAARQR 1990
Query: 182 LAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFR- 240
AAL++ L+A E ++ R+R E++ A E + L A+ +
Sbjct: 1991 KAALEEVERLKAKVEEARRLRERA-----------EQESARQLQLAQEAAQKRLQAEEKA 2039
Query: 241 -----KLRQQDLDGELRSEKEGRDRKKDKQHLKRKKESDLPSAILQTSGVSEFTKKRSKL 295
+ ++Q+L L+ E+ D+ + + R+ + A +Q + ++++ +
Sbjct: 2040 HAFAVQQKEQELQQTLQQEQSVLDQLRGEAEAARRAAEEAEEARVQAEREAAQSRRQVEE 2099
Query: 296 VLPAPQISDAELQEVVKVGQASEIARQTAEESGITNS-ASSTLLSEYNVTNNSVALRTPR 354
Q ++ + Q + A+E R+ AE+ + A L + + A
Sbjct: 2100 AERLKQSAEEQAQARAQAQAAAEKLRKEAEQEAARRAQAEQAALRQKQAAD---AEMEKH 2156
Query: 355 TPASQDRILQEAQNLMALTNVDTPL------KGGLNTPLHESDFSGVTPQRQVVQTPNTV 408
++ + Q+AQ LT + L K L+ L RQ Q +
Sbjct: 2157 KKFAEQTLRQKAQVEQELTTLRLQLEETDHQKNLLDEELQRLKAEATEAARQRSQVEEEL 2216
Query: 409 LSTPFRTPSNGAEGLTPRSGTTPKPVINSTPGRTPLRDKLNINPEDGMADYSDPSYVKQM 468
S R L R + +I LRDK N ++M
Sbjct: 2217 FSV--RVQMEELSKLKARIEAENRALI--------LRDKDN-------TQRFLQEEAEKM 2259
Query: 469 ERESREHLRLGLLGLPAPKNDFEIVLPENAEKEL-EEREIDDTYIEDAADVDARKQAIRD 527
++ + E RL + A + L + AE++L ++R + + +++ + QA+++
Sbjct: 2260 KQVAEEAARLSVAAQEAAR------LRQLAEEDLAQQRALAEKMLKE------KMQAVQE 2307
Query: 528 AERVKE----MKRMHKAVQKDLPRPSEVNETILRPLNVEPP------------LTDLQKS 571
A R+K +++ + Q+ R E E + + L E ++
Sbjct: 2308 ATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLAEETQGFQRTLEAERQRQLEMSAE 2367
Query: 572 EELIKKEMITMLHYDLLHHPYEPSGNKKGKTVGFGTNNSEHITYLE---------HNPYE 622
E +K + M K+ + +G + +E T +
Sbjct: 2368 AERLKLRVAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTELATQEKVTLVQTLEIQRQQS 2427
Query: 623 KFSKEELKKAQDVLVQEMEVVKQGMSHGELSSEAYNQVWEECYSQVLYLPGQSRYTRANL 682
E L++A L +E E ++Q +L SE V +E Q QS + +
Sbjct: 2428 DHDAERLREAIAELEREKEKLQQEAKLLQLKSEEMQTVQQEQLLQETQALQQSFLSEKDS 2487
Query: 683 ASKKDR-IESLEKRLEINRGHMTTEAKRAAKMEKKMKILLGGYQSRAMGLMKQL----ND 737
+++R IE + +LE +A++ + +++ + + + R + M++ ++
Sbjct: 2488 LLQRERFIEQEKAKLEQLFQDEVAKAQQLREEQQRQQQQMEQERQRLVASMEEARRRQHE 2547
Query: 738 LWDQIEQAHLELRTFEELKKHEDSAIPRRLECLKEDVQRQQEREKELQHRYA 789
+ + + EL+ E+ ++ ++ + + L+E +Q +E QHR A
Sbjct: 2548 AEEGVRRKQEELQQLEQQRRQQEELLAEENQRLREQLQLLEE-----QHRAA 2594
Score = 34.3 bits (77), Expect = 0.47
Identities = 43/188 (22%), Positives = 87/188 (46%), Gaps = 16/188 (8%)
Query: 148 ELEMLSEARARLANTQGKKAKRKAR-----EKQLEEARRLAALQKRRELRAAGIEIQKKR 202
E E E R A +GK ++ R E++LE+ R+LA ++ L A I+ +
Sbjct: 1647 EAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQLAEGTAQQRLAAEQELIRLRA 1706
Query: 203 KRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFRKLRQQD---LDGELRSEKEGRD 259
+ ++G + E + + Q L+A+ K+R + L + R+E+E R
Sbjct: 1707 ETEQGEQQRQLLEEELARLQREAAAATQKRQELEAELAKVRAEMEVLLASKARAEEESRS 1766
Query: 260 -RKKDKQHLKRK--KESDLPSAILQTSGVSEFTKKRSKLVL--PAPQISDAE---LQEVV 311
+K KQ L+ + + +L + ++E K++ +L A Q ++AE +++
Sbjct: 1767 TSEKSKQRLEAEAGRFRELAEEAARLRALAEEAKRQRQLAEEDAARQRAEAERVLAEKLA 1826
Query: 312 KVGQASEI 319
+G+A+ +
Sbjct: 1827 AIGEATRL 1834
>gi|47607492 plectin 1 isoform 1 [Homo sapiens]
Length = 4574
Score = 45.1 bits (105), Expect = 3e-04
Identities = 60/285 (21%), Positives = 110/285 (38%), Gaps = 27/285 (9%)
Query: 91 RTAAQCLEHYEFLLDKAAQRDNEEETTDDPRKLKPGEIDPNPETKPARPDPIDMDEDELE 150
R + + E +D Q+ + +E R+ EI A E+E+
Sbjct: 1423 RMQEEVVRREEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIR 1482
Query: 151 M----LSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIEIQKKRKRKR 206
+ L + +G+ +AR ++ E +R A Q+ E ++ + +RKR+
Sbjct: 1483 VVRLQLEATERQRGGAEGELQALRARAEEAEAQKRQA--QEEAERLRRQVQDESQRKRQA 1540
Query: 207 GVDYNAEIPFEKKPALGFYDTSEENYQALDADFRKLRQQDLDGELRSEKEGRDRKKDKQH 266
V+ + + E + A E +AL A L+ ELR + E +R+ +
Sbjct: 1541 EVELASRVKAEAEAA-------REKQRALQA---------LE-ELRLQAEEAERRLRQAE 1583
Query: 267 LKRKKESDLPSAILQTSGVSEFTKKRSKLVLPAPQISDAELQEVVKVGQ----ASEIARQ 322
++R ++ + Q S +E KR+ Q+ + +E V V Q A A+Q
Sbjct: 1584 VERARQVQVALETAQRSAEAELQSKRASFAEKTAQLERSLQEEHVAVAQLREEAERRAQQ 1643
Query: 323 TAEESGITNSASSTLLSEYNVTNNSVALRTPRTPASQDRILQEAQ 367
AE A L N ++ LR +Q + L +A+
Sbjct: 1644 QAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQAE 1688
Score = 37.4 bits (85), Expect = 0.056
Identities = 137/772 (17%), Positives = 288/772 (37%), Gaps = 105/772 (13%)
Query: 68 EEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLL------DKAAQRDNEEETTDDPR 121
EE+L L K ++ ++ T Q + E +L +KAA E E
Sbjct: 1919 EERLAQLRKASDSELERQKGLVEDTLRQRRQVEEEILALKASFEKAAAGKAELE------ 1972
Query: 122 KLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARR 181
L+ G I N E + +++ L+ R ++ ++ ++ +R
Sbjct: 1973 -LELGRIRSNAEDTLRSKEQAELEAARQRQLAAEEERRRREAEERVQKSLAAEEEAARQR 2031
Query: 182 LAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFR- 240
AAL++ L+A E ++ R+R E++ A E + L A+ +
Sbjct: 2032 KAALEEVERLKAKVEEARRLRERA-----------EQESARQLQLAQEAAQKRLQAEEKA 2080
Query: 241 -----KLRQQDLDGELRSEKEGRDRKKDKQHLKRKKESDLPSAILQTSGVSEFTKKRSKL 295
+ ++Q+L L+ E+ D+ + + R+ + A +Q + ++++ +
Sbjct: 2081 HAFAVQQKEQELQQTLQQEQSVLDQLRGEAEAARRAAEEAEEARVQAEREAAQSRRQVEE 2140
Query: 296 VLPAPQISDAELQEVVKVGQASEIARQTAEESGITNS-ASSTLLSEYNVTNNSVALRTPR 354
Q ++ + Q + A+E R+ AE+ + A L + + A
Sbjct: 2141 AERLKQSAEEQAQARAQAQAAAEKLRKEAEQEAARRAQAEQAALRQKQAAD---AEMEKH 2197
Query: 355 TPASQDRILQEAQNLMALTNVDTPL------KGGLNTPLHESDFSGVTPQRQVVQTPNTV 408
++ + Q+AQ LT + L K L+ L RQ Q +
Sbjct: 2198 KKFAEQTLRQKAQVEQELTTLRLQLEETDHQKNLLDEELQRLKAEATEAARQRSQVEEEL 2257
Query: 409 LSTPFRTPSNGAEGLTPRSGTTPKPVINSTPGRTPLRDKLNINPEDGMADYSDPSYVKQM 468
S R L R + +I LRDK N ++M
Sbjct: 2258 FSV--RVQMEELSKLKARIEAENRALI--------LRDKDN-------TQRFLQEEAEKM 2300
Query: 469 ERESREHLRLGLLGLPAPKNDFEIVLPENAEKEL-EEREIDDTYIEDAADVDARKQAIRD 527
++ + E RL + A + L + AE++L ++R + + +++ + QA+++
Sbjct: 2301 KQVAEEAARLSVAAQEAAR------LRQLAEEDLAQQRALAEKMLKE------KMQAVQE 2348
Query: 528 AERVKE----MKRMHKAVQKDLPRPSEVNETILRPLNVEPP------------LTDLQKS 571
A R+K +++ + Q+ R E E + + L E ++
Sbjct: 2349 ATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLAEETQGFQRTLEAERQRQLEMSAE 2408
Query: 572 EELIKKEMITMLHYDLLHHPYEPSGNKKGKTVGFGTNNSEHITYLE---------HNPYE 622
E +K + M K+ + +G + +E T +
Sbjct: 2409 AERLKLRVAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTELATQEKVTLVQTLEIQRQQS 2468
Query: 623 KFSKEELKKAQDVLVQEMEVVKQGMSHGELSSEAYNQVWEECYSQVLYLPGQSRYTRANL 682
E L++A L +E E ++Q +L SE V +E Q QS + +
Sbjct: 2469 DHDAERLREAIAELEREKEKLQQEAKLLQLKSEEMQTVQQEQLLQETQALQQSFLSEKDS 2528
Query: 683 ASKKDR-IESLEKRLEINRGHMTTEAKRAAKMEKKMKILLGGYQSRAMGLMKQL----ND 737
+++R IE + +LE +A++ + +++ + + + R + M++ ++
Sbjct: 2529 LLQRERFIEQEKAKLEQLFQDEVAKAQQLREEQQRQQQQMEQERQRLVASMEEARRRQHE 2588
Query: 738 LWDQIEQAHLELRTFEELKKHEDSAIPRRLECLKEDVQRQQEREKELQHRYA 789
+ + + EL+ E+ ++ ++ + + L+E +Q +E QHR A
Sbjct: 2589 AEEGVRRKQEELQQLEQQRRQQEELLAEENQRLREQLQLLEE-----QHRAA 2635
Score = 34.3 bits (77), Expect = 0.47
Identities = 43/188 (22%), Positives = 87/188 (46%), Gaps = 16/188 (8%)
Query: 148 ELEMLSEARARLANTQGKKAKRKAR-----EKQLEEARRLAALQKRRELRAAGIEIQKKR 202
E E E R A +GK ++ R E++LE+ R+LA ++ L A I+ +
Sbjct: 1688 EAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQLAEGTAQQRLAAEQELIRLRA 1747
Query: 203 KRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFRKLRQQD---LDGELRSEKEGRD 259
+ ++G + E + + Q L+A+ K+R + L + R+E+E R
Sbjct: 1748 ETEQGEQQRQLLEEELARLQREAAAATQKRQELEAELAKVRAEMEVLLASKARAEEESRS 1807
Query: 260 -RKKDKQHLKRK--KESDLPSAILQTSGVSEFTKKRSKLVL--PAPQISDAE---LQEVV 311
+K KQ L+ + + +L + ++E K++ +L A Q ++AE +++
Sbjct: 1808 TSEKSKQRLEAEAGRFRELAEEAARLRALAEEAKRQRQLAEEDAARQRAEAERVLAEKLA 1867
Query: 312 KVGQASEI 319
+G+A+ +
Sbjct: 1868 AIGEATRL 1875
>gi|22538461 nuclear receptor co-repressor 1 [Homo sapiens]
Length = 2440
Score = 44.7 bits (104), Expect = 3e-04
Identities = 56/249 (22%), Positives = 91/249 (36%), Gaps = 28/249 (11%)
Query: 11 WRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEEEK 70
W E E+ K ++++G+N W+ IA ++ KS QCK ++ + R +
Sbjct: 628 WTEEEMEVAKKGLVEHGRN-WAAIAKMVGTKSEAQCKNFYFNYK---------RRHNLDN 677
Query: 71 LLHLAKLMPTQWRTIAPIIGRTAAQC---LEHYEFLLDKAAQRDNEEETTDDP--RKLKP 125
LL K Q + P R +QC D+ + NEEE +D +KP
Sbjct: 678 LLQQHK----QKTSRKPREERDVSQCESVASTVSAQEDEDIEASNEEENPEDSEVEAVKP 733
Query: 126 GEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQL------EEA 179
E P T +P E E LA K A+ ++ E Q+ E A
Sbjct: 734 SEDSPENATSRGNTEPAVELEPTTETAPSTSPSLAVPSTKPAEDESVETQVNDSISAETA 793
Query: 180 RRLAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADF 239
++ Q+ + + VD +P + +T E + LD
Sbjct: 794 EQMDVDQQEHSAEEGSVCDPPPATKADSVDVEVRVPENHASKVEGDNTKERD---LDRAS 850
Query: 240 RKLRQQDLD 248
K+ +D D
Sbjct: 851 EKVEPRDED 859
Score = 43.1 bits (100), Expect = 0.001
Identities = 84/375 (22%), Positives = 138/375 (36%), Gaps = 44/375 (11%)
Query: 10 VWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEEE 69
VW + E EI K +++ KN + IAS L RKS C +Y + E
Sbjct: 439 VWTDHEKEIFKDKFIQHPKN-FGLIASYLERKSVPDCVLYYYLT----------KKNENY 487
Query: 70 KLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDKAAQRDNEEETTDDPRKLKPGEID 129
K L + R I + + +E E DKA + + +EE D + K + D
Sbjct: 488 KALVRRNYGKRRGRN-QQIARPSQEEKVEEKEE--DKAEKTEKKEEEKKDEEE-KDEKED 543
Query: 130 PNPETKPARPDPIDMDEDELEMLSEARAR---LANTQGKKAKRKAREKQLEEARRLAALQ 186
TK D ID +E E +A R AN+QG++ R R E A AA
Sbjct: 544 SKENTK--EKDKIDGTAEETEEREQATPRGRKTANSQGRRKGRITRSMTNEAAAASAAAA 601
Query: 187 KRRE------------LRAAGIEIQKKRKRKRGVDYNAEIPFEKK-PALGFYDTSEENYQ 233
E + +E + + + V + + A+ ++ Q
Sbjct: 602 AATEEPPPPLPPPPEPISTEPVETSRWTEEEMEVAKKGLVEHGRNWAAIAKMVGTKSEAQ 661
Query: 234 ALDADFRKLRQQDLDGELRSEKEGRDRKKDKQHLKRKKESDLPSAILQTSGVSEFTKKRS 293
+ F R+ +LD L+ K+ RK ++E D+ S VS +
Sbjct: 662 CKNFYFNYKRRHNLDNLLQQHKQKTSRKP-------REERDVSQCESVASTVSAQEDEDI 714
Query: 294 KLVLPAPQISDAELQEVVKVGQASEIARQTAEESGITNSASSTLLSEYNVTNNSVALRTP 353
+ D+E++ V + SE + + A G T A + + S +L P
Sbjct: 715 EASNEEENPEDSEVEAV----KPSEDSPENATSRGNTEPAVELEPTTETAPSTSPSLAVP 770
Query: 354 RTPASQDRILQEAQN 368
T ++D ++ N
Sbjct: 771 STKPAEDESVETQVN 785
>gi|169167715 PREDICTED: hypothetical protein [Homo sapiens]
Length = 285
Score = 44.7 bits (104), Expect = 3e-04
Identities = 35/131 (26%), Positives = 62/131 (47%), Gaps = 4/131 (3%)
Query: 142 IDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIEIQKK 201
I+ D D R R + K+ + R+++ E R+ ++R R E ++
Sbjct: 84 IEKDRDRQRKRDRERQRWRDRDRKRERWGDRDRETETERQEERERQRDRKREKDRE--RQ 141
Query: 202 RKRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFRKLRQ--QDLDGELRSEKEGRD 259
R+R+ G+D + EI EK E Y+ + + +K R+ +D D E + EKE R+
Sbjct: 142 RQREIGIDKDREIETEKDRDREREMGETERYRDRERERQKQRETRRDRDRERQREKEDRE 201
Query: 260 RKKDKQHLKRK 270
R +D+Q + K
Sbjct: 202 RDRDRQKEREK 212
Score = 39.3 bits (90), Expect = 0.015
Identities = 43/186 (23%), Positives = 74/186 (39%), Gaps = 21/186 (11%)
Query: 105 DKAAQRDNEEETTDDPRKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQG 164
D+ +RD E + D + + D + ET+ R + + D R R
Sbjct: 89 DRQRKRDRERQRWRDRDRKRERWGDRDRETETERQEERERQRDRKREKDRERQRQREIGI 148
Query: 165 KKAKRKAREKQLEEARRLAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGF 224
K + EK + R + ++ R+ E QK+R+ +R D +
Sbjct: 149 DKDREIETEKDRDREREMGETERYRDRER---ERQKQRETRRDRDRERQ----------- 194
Query: 225 YDTSEENYQALDADFRKLRQQDLDGELRSEKEGRDRKKDK-QHLKRKKESDLPSAILQTS 283
E+ + D D +K R++D R + GRDR K++ + +R+K+ D AI
Sbjct: 195 ---REKEDRERDRDRQKEREKD---RYRERETGRDRDKERDRERQREKDRDRQKAIDCVP 248
Query: 284 GVSEFT 289
G E T
Sbjct: 249 GRWEVT 254
Score = 30.4 bits (67), Expect = 6.8
Identities = 28/106 (26%), Positives = 45/106 (42%), Gaps = 27/106 (25%)
Query: 170 KAREKQLEEARRLAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTSE 229
+ RE+Q E R+ ++R + IE + R+RKR
Sbjct: 58 RERERQRERERQRKRAKERHREKDREIEKDRDRQRKR---------------------DR 96
Query: 230 ENYQALDADFRKLRQQDLDGELRSEK-EGRDRKKDKQHLKRKKESD 274
E + D D ++ R D D E +E+ E R+R++D RK+E D
Sbjct: 97 ERQRWRDRDRKRERWGDRDRETETERQEERERQRD-----RKREKD 137
>gi|239749449 PREDICTED: hypothetical protein [Homo sapiens]
Length = 275
Score = 44.7 bits (104), Expect = 3e-04
Identities = 36/164 (21%), Positives = 72/164 (43%), Gaps = 2/164 (1%)
Query: 109 QRDNEEETTDDPRKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAK 168
+R+ + + RK + G+ + K R + E E + R + KK K
Sbjct: 42 EREKRKREREKERKRERGKKEKKKRKKRERGKERERKRKEREKQRKERREKERRKRKKEK 101
Query: 169 RKAREKQLEEARRLAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTS 228
+K KQ RR +K R+ R + +++RKRK+ +++ G +
Sbjct: 102 KKRERKQ--RGRRERKKKKERKERERENKQRRERKRKKRRKKKRRKERKREKERGKRERK 159
Query: 229 EENYQALDADFRKLRQQDLDGELRSEKEGRDRKKDKQHLKRKKE 272
+ + + + ++ R + + R KE R+RKK+++ +RKK+
Sbjct: 160 RKKRKKEEREKKRERNRKERKKERERKERRERKKERKKERRKKK 203
Score = 38.5 bits (88), Expect = 0.025
Identities = 32/124 (25%), Positives = 57/124 (45%), Gaps = 15/124 (12%)
Query: 165 KKAKRKAREKQLEEARRLAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGF 224
+K KRK RE+ E R+ +K+R+ R E +K++K K+ + E+K
Sbjct: 62 EKKKRKKRERGKERERKRKEREKQRKERREK-ERRKRKKEKKKRERKQRGRRERKKKKER 120
Query: 225 YDTSEENYQALDADFRKLRQQDLDGELRSEKEG--------------RDRKKDKQHLKRK 270
+ EN Q + +K R++ E + EKE R++K+++ +RK
Sbjct: 121 KERERENKQRRERKRKKRRKKKRRKERKREKERGKRERKRKKRKKEEREKKRERNRKERK 180
Query: 271 KESD 274
KE +
Sbjct: 181 KERE 184
Score = 38.1 bits (87), Expect = 0.033
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 8/129 (6%)
Query: 154 EARARLANTQGKKA--KRKAREKQLEEAR------RLAALQKRRELRAAGIEIQKKRKRK 205
E + R +GK+ KRK REKQ +E R R +KR + E +KK++RK
Sbjct: 62 EKKKRKKRERGKERERKRKEREKQRKERREKERRKRKKEKKKRERKQRGRRERKKKKERK 121
Query: 206 RGVDYNAEIPFEKKPALGFYDTSEENYQALDADFRKLRQQDLDGELRSEKEGRDRKKDKQ 265
N + K+ +E + + R+ +++ E R +K R+RK+ K+
Sbjct: 122 ERERENKQRRERKRKKRRKKKRRKERKREKERGKRERKRKKRKKEEREKKRERNRKERKK 181
Query: 266 HLKRKKESD 274
+RK+ +
Sbjct: 182 ERERKERRE 190
Score = 36.6 bits (83), Expect = 0.095
Identities = 31/126 (24%), Positives = 63/126 (50%), Gaps = 14/126 (11%)
Query: 148 ELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIEIQKKRKRKRG 207
EL+M+S + TQ + ++K R E +R +K R+ E +K++KR+RG
Sbjct: 16 ELQMVSCSHISKPCTQRESERKKERR---EREKRKREREKERKRERGKKEKKKRKKRERG 72
Query: 208 VDYNAEIPFEKKPALGFYDTSEENYQALDADFRKLRQQDLDGELRSEKEGRDRKKDKQHL 267
+ E+K + ++ + + + RK +++ E R ++ R+RKK K+
Sbjct: 73 KER------ERKRK----EREKQRKERREKERRKRKKEKKKRE-RKQRGRRERKKKKERK 121
Query: 268 KRKKES 273
+R++E+
Sbjct: 122 EREREN 127
Score = 33.5 bits (75), Expect = 0.80
Identities = 35/142 (24%), Positives = 61/142 (42%), Gaps = 13/142 (9%)
Query: 141 PIDMDEDELEMLSEARARLANTQGKKAKRK----------AREKQLEEARRLAALQKRRE 190
P E E + R + + K+ KR+ RE+ E R+ +K+R+
Sbjct: 28 PCTQRESERKKERREREKRKREREKERKRERGKKEKKKRKKRERGKERERKRKEREKQRK 87
Query: 191 LRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFRKLRQQDLDGE 250
R E +K++K K+ + E+K + EN Q + +K R++ E
Sbjct: 88 ERREK-ERRKRKKEKKKRERKQRGRRERKKKKERKERERENKQRRERKRKKRRKKKRRKE 146
Query: 251 LRSEKEGRDRKKDKQHLKRKKE 272
+ EKE K++++ KRKKE
Sbjct: 147 RKREKE--RGKRERKRKKRKKE 166
Score = 30.8 bits (68), Expect = 5.2
Identities = 34/161 (21%), Positives = 65/161 (40%), Gaps = 27/161 (16%)
Query: 106 KAAQRDNEEETTDDPRKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGK 165
K ++ +E + RK K + + + R + E E ++ R + +
Sbjct: 80 KEREKQRKERREKERRKRKKEKKKRERKQRGRRERKKKKERKERERENKQRRERKRKKRR 139
Query: 166 KAKRKAREKQLEEARRLAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFY 225
K KR+ K+ +E + +K+R+ E +KKR+R R
Sbjct: 140 KKKRRKERKREKERGKRERKRKKRKKE----EREKKRERNR------------------- 176
Query: 226 DTSEENYQALDADFRKLRQQDLDGELRSEKE-GRDRKKDKQ 265
+E + + R+ R+++ E R +KE +DRK D+Q
Sbjct: 177 ---KERKKERERKERRERKKERKKERRKKKERKKDRKTDRQ 214
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.129 0.360
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,634,803
Number of Sequences: 37866
Number of extensions: 1571411
Number of successful extensions: 9167
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 559
Number of HSP's that attempted gapping in prelim test: 7120
Number of HSP's gapped (non-prelim): 2305
length of query: 802
length of database: 18,247,518
effective HSP length: 110
effective length of query: 692
effective length of database: 14,082,258
effective search space: 9744922536
effective search space used: 9744922536
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.