Search of human proteins with 110611239

Search of human proteins with 110611239

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|110611239 alpha-L-iduronidase precursor [Homo sapiens]
         (653 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|110611239 alpha-L-iduronidase precursor [Homo sapiens]            1350   0.0  
gi|169172087 PREDICTED: hypothetical protein [Homo sapiens]            35   0.17 
gi|126723547 hypothetical protein LOC57523 [Homo sapiens]              33   0.63 
gi|169171833 PREDICTED: hypothetical protein [Homo sapiens]            33   0.83 
gi|239747357 PREDICTED: hypothetical protein XP_002346431 [Homo ...    33   1.1  
gi|169171690 PREDICTED: hypothetical protein [Homo sapiens]            32   1.4  
gi|169171083 PREDICTED: hypothetical protein [Homo sapiens]            32   1.4  
gi|239508966 PREDICTED: hypothetical protein [Homo sapiens]            32   1.4  
gi|38261962 activating transcription factor 7 interacting protei...    32   1.8  
gi|239757987 PREDICTED: hypothetical protein [Homo sapiens]            31   3.1  
gi|54112403 chromodomain helicase DNA binding protein 7 [Homo sa...    31   4.1  
gi|110556636 tankyrase 1-binding protein 1 [Homo sapiens]              30   5.4  
gi|24308115 interferon regulatory factor 2 binding protein 1 [Ho...    30   9.1  
gi|47717112 zinc finger, FYVE domain containing 9 isoform 1 [Hom...    30   9.1  
gi|47717106 zinc finger, FYVE domain containing 9 isoform 3 [Hom...    30   9.1  
gi|58331230 DALR anticodon binding domain containing 3 isoform 1...    30   9.1  

>gi|110611239 alpha-L-iduronidase precursor [Homo sapiens]
          Length = 653

 Score = 1350 bits (3495), Expect = 0.0
 Identities = 653/653 (100%), Positives = 653/653 (100%)

Query: 1   MRPLRPRAALLALLASLLAAPPVAPAEAPHLVHVDAARALWPLRRFWRSTGFCPPLPHSQ 60
           MRPLRPRAALLALLASLLAAPPVAPAEAPHLVHVDAARALWPLRRFWRSTGFCPPLPHSQ
Sbjct: 1   MRPLRPRAALLALLASLLAAPPVAPAEAPHLVHVDAARALWPLRRFWRSTGFCPPLPHSQ 60

Query: 61  ADQYVLSWDQQLNLAYVGAVPHRGIKQVRTHWLLELVTTRGSTGRGLSYNFTHLDGYLDL 120
           ADQYVLSWDQQLNLAYVGAVPHRGIKQVRTHWLLELVTTRGSTGRGLSYNFTHLDGYLDL
Sbjct: 61  ADQYVLSWDQQLNLAYVGAVPHRGIKQVRTHWLLELVTTRGSTGRGLSYNFTHLDGYLDL 120

Query: 121 LRENQLLPGFELMGSASGHFTDFEDKQQVFEWKDLVSSLARRYIGRYGLAHVSKWNFETW 180
           LRENQLLPGFELMGSASGHFTDFEDKQQVFEWKDLVSSLARRYIGRYGLAHVSKWNFETW
Sbjct: 121 LRENQLLPGFELMGSASGHFTDFEDKQQVFEWKDLVSSLARRYIGRYGLAHVSKWNFETW 180

Query: 181 NEPDHHDFDNVSMTMQGFLNYYDACSEGLRAASPALRLGGPGDSFHTPPRSPLSWGLLRH 240
           NEPDHHDFDNVSMTMQGFLNYYDACSEGLRAASPALRLGGPGDSFHTPPRSPLSWGLLRH
Sbjct: 181 NEPDHHDFDNVSMTMQGFLNYYDACSEGLRAASPALRLGGPGDSFHTPPRSPLSWGLLRH 240

Query: 241 CHDGTNFFTGEAGVRLDYISLHRKGARSSISILEQEKVVAQQIRQLFPKFADTPIYNDEA 300
           CHDGTNFFTGEAGVRLDYISLHRKGARSSISILEQEKVVAQQIRQLFPKFADTPIYNDEA
Sbjct: 241 CHDGTNFFTGEAGVRLDYISLHRKGARSSISILEQEKVVAQQIRQLFPKFADTPIYNDEA 300

Query: 301 DPLVGWSLPQPWRADVTYAAMVVKVIAQHQNLLLANTTSAFPYALLSNDNAFLSYHPHPF 360
           DPLVGWSLPQPWRADVTYAAMVVKVIAQHQNLLLANTTSAFPYALLSNDNAFLSYHPHPF
Sbjct: 301 DPLVGWSLPQPWRADVTYAAMVVKVIAQHQNLLLANTTSAFPYALLSNDNAFLSYHPHPF 360

Query: 361 AQRTLTARFQVNNTRPPHVQLLRKPVLTAMGLLALLDEEQLWAEVSQAGTVLDSNHTVGV 420
           AQRTLTARFQVNNTRPPHVQLLRKPVLTAMGLLALLDEEQLWAEVSQAGTVLDSNHTVGV
Sbjct: 361 AQRTLTARFQVNNTRPPHVQLLRKPVLTAMGLLALLDEEQLWAEVSQAGTVLDSNHTVGV 420

Query: 421 LASAHRPQGPADAWRAAVLIYASDDTRAHPNRSVAVTLRLRGVPPGPGLVYVTRYLDNGL 480
           LASAHRPQGPADAWRAAVLIYASDDTRAHPNRSVAVTLRLRGVPPGPGLVYVTRYLDNGL
Sbjct: 421 LASAHRPQGPADAWRAAVLIYASDDTRAHPNRSVAVTLRLRGVPPGPGLVYVTRYLDNGL 480

Query: 481 CSPDGEWRRLGRPVFPTAEQFRRMRAAEDPVAAAPRPLPAGGRLTLRPALRLPSLLLVHV 540
           CSPDGEWRRLGRPVFPTAEQFRRMRAAEDPVAAAPRPLPAGGRLTLRPALRLPSLLLVHV
Sbjct: 481 CSPDGEWRRLGRPVFPTAEQFRRMRAAEDPVAAAPRPLPAGGRLTLRPALRLPSLLLVHV 540

Query: 541 CARPEKPPGQVTRLRALPLTQGQLVLVWSDEHVGSKCLWTYEIQFSQDGKAYTPVSRKPS 600
           CARPEKPPGQVTRLRALPLTQGQLVLVWSDEHVGSKCLWTYEIQFSQDGKAYTPVSRKPS
Sbjct: 541 CARPEKPPGQVTRLRALPLTQGQLVLVWSDEHVGSKCLWTYEIQFSQDGKAYTPVSRKPS 600

Query: 601 TFNLFVFSPDTGAVSGSYRVRALDYWARPGPFSDPVPYLEVPVPRGPPSPGNP 653
           TFNLFVFSPDTGAVSGSYRVRALDYWARPGPFSDPVPYLEVPVPRGPPSPGNP
Sbjct: 601 TFNLFVFSPDTGAVSGSYRVRALDYWARPGPFSDPVPYLEVPVPRGPPSPGNP 653


>gi|169172087 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 278

 Score = 35.4 bits (80), Expect = 0.17
 Identities = 22/78 (28%), Positives = 30/78 (38%)

Query: 574 GSKCLWTYEIQFSQDGKAYTPVSRKPSTFNLFVFSPDTGAVSGSYRVRALDYWARPGPFS 633
           GS  L    ++  + G+       +PS       + D  A  G    R L +W R  P +
Sbjct: 30  GSPVLCAAALRRPRGGRCRRGGDPRPSAHLKLSAASDWRAQRGPGEGRGLRHWPRGAPVT 89

Query: 634 DPVPYLEVPVPRGPPSPG 651
            P      P PRGP  PG
Sbjct: 90  VPAARRPAPAPRGPKQPG 107


>gi|126723547 hypothetical protein LOC57523 [Homo sapiens]
          Length = 1898

 Score = 33.5 bits (75), Expect = 0.63
 Identities = 27/88 (30%), Positives = 37/88 (42%), Gaps = 6/88 (6%)

Query: 3    PLRPRAALLALLASLLAAPPVAPAEAPHLVHVD-AARALWPLRRFWRSTGFC----PPLP 57
            P  P  A LA +A  L     +P     L H +     LW L   WR+ GF      PLP
Sbjct: 1347 PYTPTYAHLAAVACGLERFGQSPLPVVFLTHCNWIFSLLWELLPLWRARGFLSSDGAPLP 1406

Query: 58   HSQADQYVLSWDQQL-NLAYVGAVPHRG 84
            H     Y++S    L +L ++    +RG
Sbjct: 1407 HPSLLSYIISLTSGLSSLPFIYRTSYRG 1434


>gi|169171833 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 157

 Score = 33.1 bits (74), Expect = 0.83
 Identities = 30/92 (32%), Positives = 33/92 (35%), Gaps = 14/92 (15%)

Query: 480 LCSPDGEWRRLGRPV----FPTAEQFRRMRAAEDP------VAAAPRPLPAGGRLTLRPA 529
           LC P      L  P+     P     RR RA   P      V  AP P P       R  
Sbjct: 6   LCPPTAPSEPLTCPMGVSPAPWGRPLRRSRARPGPCPPEGLVPRAPPPGPRPTAAATRAT 65

Query: 530 LRLPSLLLVHVC----ARPEKPPGQVTRLRAL 557
            R+P    V  C    ARP +PP    R RAL
Sbjct: 66  FRVPERRTVPPCPRRPARPSQPPSAARRERAL 97


>gi|239747357 PREDICTED: hypothetical protein XP_002346431 [Homo
           sapiens]
          Length = 205

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 30/85 (35%), Positives = 40/85 (47%), Gaps = 7/85 (8%)

Query: 455 AVTLRLRGVP---PGPGLVYVTRYLDNGLCSPDGEWRRLGRPVFPTAE---QFRRMRAAE 508
           A  +R  G P   PG G  +    L++G+    G  R  G  VF   E   + RR+ AA 
Sbjct: 32  AAAVRREGEPRAAPGTGRYHEAGTLESGVGGRTGTGREEGS-VFRKGEGTWRRRRLLAAA 90

Query: 509 DPVAAAPRPLPAGGRLTLRPALRLP 533
           DP A+   P+     LTL PA +LP
Sbjct: 91  DPRASPCLPVRGILSLTLLPARQLP 115


>gi|169171690 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 157

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 25/72 (34%), Positives = 27/72 (37%), Gaps = 10/72 (13%)

Query: 496 PTAEQFRRMRAAEDP------VAAAPRPLPAGGRLTLRPALRLPSLLLVHVC----ARPE 545
           P     RR RA   P      V  AP P P       R   R+P    V  C    ARP 
Sbjct: 26  PWGRPLRRSRARPGPCPPEGLVPRAPPPGPRPTAAATRATFRVPERRTVPPCPRRPARPS 85

Query: 546 KPPGQVTRLRAL 557
           +PP    R RAL
Sbjct: 86  QPPSAARRERAL 97


>gi|169171083 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 157

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 25/72 (34%), Positives = 27/72 (37%), Gaps = 10/72 (13%)

Query: 496 PTAEQFRRMRAAEDP------VAAAPRPLPAGGRLTLRPALRLPSLLLVHVC----ARPE 545
           P     RR RA   P      V  AP P P       R   R+P    V  C    ARP 
Sbjct: 26  PWGRPLRRSRARPGPCPPEGLVPRAPPPGPRPTAAATRATFRVPERRTVPPCPRRPARPS 85

Query: 546 KPPGQVTRLRAL 557
           +PP    R RAL
Sbjct: 86  QPPSAARRERAL 97


>gi|239508966 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 157

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 25/72 (34%), Positives = 27/72 (37%), Gaps = 10/72 (13%)

Query: 496 PTAEQFRRMRAAEDP------VAAAPRPLPAGGRLTLRPALRLPSLLLVHVC----ARPE 545
           P     RR RA   P      V  AP P P       R   R+P    V  C    ARP 
Sbjct: 26  PWGRPLRRSRARPGPCPPEGLVPRAPPPGPRPTAAATRATFRVPERRTVPPCPRRPARPS 85

Query: 546 KPPGQVTRLRAL 557
           +PP    R RAL
Sbjct: 86  QPPSAARRERAL 97


>gi|38261962 activating transcription factor 7 interacting protein
            [Homo sapiens]
          Length = 1270

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 21/138 (15%)

Query: 508  EDPVAAAPRPLPAGGRLTLRPALRLPSLLLVHVCARPEKPPGQVTRLRALPLTQGQLVLV 567
            E P    P PLP   +    P     + L       P+KP  ++ R+++    Q  +VL 
Sbjct: 1132 EPPRPVHPAPLPEAPQPQRLPPEAASTSL-------PQKPHLKLARVQS----QNGIVLS 1180

Query: 568  WSDEHVGSKCLW--TYEIQ-FSQDGKAYTPVSRKP----STFNLFVFSPDTGAVSGS--- 617
            WS   V   C    +Y +  + ++  A  P   K         L +    T  VSGS   
Sbjct: 1181 WSVLEVDRSCATVDSYHLYAYHEEPSATVPSQWKKIGEVKALPLPMACTLTQFVSGSKYY 1240

Query: 618  YRVRALDYWARPGPFSDP 635
            + VRA D + R GPF DP
Sbjct: 1241 FAVRAKDIYGRFGPFCDP 1258


>gi|239757987 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 445

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 7/72 (9%)

Query: 482 SPDGEWRRLGRPVFPTAEQFRRMRAAEDPVAAAPRPLP-------AGGRLTLRPALRLPS 534
           +P G   R  RP  PT+    R+   E P    P PLP            T+RP LR+ +
Sbjct: 233 APPGPPLRPARPHNPTSRGPGRLLTCEPPSRKLPPPLPLCRSRWVLAPPPTVRPRLRVLT 292

Query: 535 LLLVHVCARPEK 546
                +CA PE+
Sbjct: 293 PPFTLLCALPER 304


>gi|54112403 chromodomain helicase DNA binding protein 7 [Homo
           sapiens]
          Length = 2997

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 14/42 (33%), Positives = 20/42 (47%)

Query: 199 LNYYDACSEGLRAASPALRLGGPGDSFHTPPRSPLSWGLLRH 240
           ++ +    EGL   +P +   GPG   H P +SP     LRH
Sbjct: 210 MSQFSQGQEGLNQGNPFIATSGPGHLSHVPQQSPSMAPSLRH 251


>gi|110556636 tankyrase 1-binding protein 1 [Homo sapiens]
          Length = 1729

 Score = 30.4 bits (67), Expect = 5.4
 Identities = 29/89 (32%), Positives = 38/89 (42%), Gaps = 12/89 (13%)

Query: 488 RRLGRPVFPTAEQFRRMRAAEDPVAAAPRPLPAGGRLTLRPALRLPSLLLVHVCARPEKP 547
           R +   + PT  +    RA + PV   PR LPA      +PAL     LLV V  RP + 
Sbjct: 18  REMEEELVPTGSEPGDTRA-KPPVKPKPRALPA------KPALPAKPSLLVPVGPRPPRG 70

Query: 548 PGQVTRLRALPLTQGQLVLVWSDEHVGSK 576
           P     L  LP  +   +L     + GSK
Sbjct: 71  P-----LAELPSARKMNMLAGPQPYGGSK 94


>gi|24308115 interferon regulatory factor 2 binding protein 1 [Homo
           sapiens]
          Length = 584

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 23/75 (30%), Positives = 28/75 (37%), Gaps = 3/75 (4%)

Query: 474 RYLDNGLCSPDGEWRRLGRPVFPTAEQFRRMRAAEDPVAAAPRPLPAGGRLTLRPALRLP 533
           +YL+       GEWR+LG  +      FR    AE      P P PA       P  R P
Sbjct: 314 KYLEYERRHGSGEWRQLGELLTDGVRSFREPAPAEALPQQYPEPAPAA---LCGPPPRAP 370

Query: 534 SLLLVHVCARPEKPP 548
           S  L     R +  P
Sbjct: 371 SRNLAPTPRRRKASP 385


>gi|47717112 zinc finger, FYVE domain containing 9 isoform 1 [Homo
            sapiens]
          Length = 1366

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 13/40 (32%), Positives = 23/40 (57%)

Query: 377  PHVQLLRKPVLTAMGLLALLDEEQLWAEVSQAGTVLDSNH 416
            PH++LL++  +T +GL   LD +Q+  +    G  L S +
Sbjct: 1290 PHLKLLKEDGMTKLGLRVTLDSDQVGYQAGSNGQPLPSQY 1329


>gi|47717106 zinc finger, FYVE domain containing 9 isoform 3 [Homo
            sapiens]
          Length = 1425

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 13/40 (32%), Positives = 23/40 (57%)

Query: 377  PHVQLLRKPVLTAMGLLALLDEEQLWAEVSQAGTVLDSNH 416
            PH++LL++  +T +GL   LD +Q+  +    G  L S +
Sbjct: 1349 PHLKLLKEDGMTKLGLRVTLDSDQVGYQAGSNGQPLPSQY 1388


>gi|58331230 DALR anticodon binding domain containing 3 isoform 1
           [Homo sapiens]
          Length = 543

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)

Query: 43  LRRFWRSTGFCPPLPHSQADQYVLSWDQQLNLAYVGAVPHRGIKQVRTHWLLELVTTRGS 102
           L R  R+ G C  L  +  D ++L++ QQL + +  A        +R+H L EL  T  +
Sbjct: 146 LARALRAHGVCVRLVPAVRDPHMLTFLQQLRVDWPAASERASSHTLRSHALEEL--TSAN 203

Query: 103 TGRGLS 108
            GR LS
Sbjct: 204 DGRTLS 209


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.137    0.438 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,080,813
Number of Sequences: 37866
Number of extensions: 1575318
Number of successful extensions: 4288
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 4273
Number of HSP's gapped (non-prelim): 20
length of query: 653
length of database: 18,247,518
effective HSP length: 109
effective length of query: 544
effective length of database: 14,120,124
effective search space: 7681347456
effective search space used: 7681347456
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.