Search of human proteins with 167234417

Search of human proteins with 167234417

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|167234417 hypothetical protein LOC441054 [Homo sapiens]
         (309 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|167234417 hypothetical protein LOC441054 [Homo sapiens]            640   0.0  
gi|71725360 zinc finger protein 609 [Homo sapiens]                     32   0.93 
gi|66932990 folylpolyglutamate synthase isoform b [Homo sapiens]       31   1.2  
gi|66932984 folylpolyglutamate synthase isoform a precursor [Hom...    31   1.2  
gi|14165274 golgi-associated microtubule-binding protein HOOK3 [...    31   1.6  
gi|31083280 delta isoform of regulatory subunit B56, protein pho...    30   2.1  
gi|5453954 delta isoform of regulatory subunit B56, protein phos...    30   2.1  
gi|120587029 signal peptide, CUB domain, EGF-like 1 [Homo sapiens]     30   2.1  
gi|26051240 tumor necrosis factor, alpha-induced protein 2 [Homo...    29   6.0  
gi|69354859 ADAM metallopeptidase domain 8 precursor [Homo sapiens]    28   7.9  
gi|117414154 sodium channel associated protein 2 isoform b [Homo...    28   7.9  
gi|117414162 sodium channel associated protein 2 isoform a [Homo...    28   7.9  
gi|20911035 peptidylprolyl isomerase-like 4 [Homo sapiens]             28   7.9  

>gi|167234417 hypothetical protein LOC441054 [Homo sapiens]
          Length = 309

 Score =  640 bits (1651), Expect = 0.0
 Identities = 309/309 (100%), Positives = 309/309 (100%)

Query: 1   MPAEGGKTDMERIGLFSEMEYITVGDKYVSQFNRPFNEAASKNKQMLPGGSKEMSDLQAG 60
           MPAEGGKTDMERIGLFSEMEYITVGDKYVSQFNRPFNEAASKNKQMLPGGSKEMSDLQAG
Sbjct: 1   MPAEGGKTDMERIGLFSEMEYITVGDKYVSQFNRPFNEAASKNKQMLPGGSKEMSDLQAG 60

Query: 61  YFDPHFVRIFEGEGYINLNQVRRRDMVEAAKKNLGKAFLPSNGEKKPCGLGSYYGTIGGP 120
           YFDPHFVRIFEGEGYINLNQVRRRDMVEAAKKNLGKAFLPSNGEKKPCGLGSYYGTIGGP
Sbjct: 61  YFDPHFVRIFEGEGYINLNQVRRRDMVEAAKKNLGKAFLPSNGEKKPCGLGSYYGTIGGP 120

Query: 121 VPFFSAQSKPREKYKAPGKNLYTNPGKKGTGYGYANITIGKQFSHSADFYDAAKLKYKKA 180
           VPFFSAQSKPREKYKAPGKNLYTNPGKKGTGYGYANITIGKQFSHSADFYDAAKLKYKKA
Sbjct: 121 VPFFSAQSKPREKYKAPGKNLYTNPGKKGTGYGYANITIGKQFSHSADFYDAAKLKYKKA 180

Query: 181 NEEHHRLLKGAPFKLNLHPRDYFDANPYFSEESLPPIKKEEKKKTISNTFKPSSPGKKPG 240
           NEEHHRLLKGAPFKLNLHPRDYFDANPYFSEESLPPIKKEEKKKTISNTFKPSSPGKKPG
Sbjct: 181 NEEHHRLLKGAPFKLNLHPRDYFDANPYFSEESLPPIKKEEKKKTISNTFKPSSPGKKPG 240

Query: 241 GMKAGTFDPYPSHSADPYVAKLANISGKDDKIFHPPSGPKSRPVESIMTLNVRRALNSKN 300
           GMKAGTFDPYPSHSADPYVAKLANISGKDDKIFHPPSGPKSRPVESIMTLNVRRALNSKN
Sbjct: 241 GMKAGTFDPYPSHSADPYVAKLANISGKDDKIFHPPSGPKSRPVESIMTLNVRRALNSKN 300

Query: 301 YKTSSVPSY 309
           YKTSSVPSY
Sbjct: 301 YKTSSVPSY 309


>gi|71725360 zinc finger protein 609 [Homo sapiens]
          Length = 1411

 Score = 31.6 bits (70), Expect = 0.93
 Identities = 38/146 (26%), Positives = 63/146 (43%), Gaps = 37/146 (25%)

Query: 197 LHPRDYFDANPYFSEESLPPIK----KEEKKKTISNTFK-PSSPGK-------------- 237
           + P+      P+    +L P K    K++KKK  S   + P +PGK              
Sbjct: 704 IQPKPTVMGEPFTVNPALTPAKDKKKKDKKKKESSKELESPLTPGKVCRAEEGKSPFRES 763

Query: 238 KPGGMKAGTFDPYPSHSADPYVAKLANISGKDDKIF-------HPPSGPKSR-----PVE 285
              GMK    +   + S+DP+ ++LA+I  + DKI+        P  G  SR     P +
Sbjct: 764 SGDGMK---MEGLLNGSSDPHQSRLASIKAEADKIYSFTDNAPSPSIGGSSRLENTTPTQ 820

Query: 286 SIMTLNV--RRALNSKNYKTSSVPSY 309
            +  L+V  +    + + KT+S P+Y
Sbjct: 821 PLTPLHVVTQNGAEASSVKTNS-PAY 845


>gi|66932990 folylpolyglutamate synthase isoform b [Homo sapiens]
          Length = 537

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 22/55 (40%), Positives = 26/55 (47%), Gaps = 7/55 (12%)

Query: 233 SSPGKKPGGMKAGTFDPYPSH--SADPYVAK-----LANISGKDDKIFHPPSGPK 280
           S+P  +PGG  +    P+P H  SA   V       L  IS   D IF PPS PK
Sbjct: 438 SAPSPEPGGSASLLLAPHPPHTCSASSLVFSCISHALQWISQGRDPIFQPPSPPK 492


>gi|66932984 folylpolyglutamate synthase isoform a precursor [Homo
           sapiens]
          Length = 587

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 22/55 (40%), Positives = 26/55 (47%), Gaps = 7/55 (12%)

Query: 233 SSPGKKPGGMKAGTFDPYPSH--SADPYVAK-----LANISGKDDKIFHPPSGPK 280
           S+P  +PGG  +    P+P H  SA   V       L  IS   D IF PPS PK
Sbjct: 488 SAPSPEPGGSASLLLAPHPPHTCSASSLVFSCISHALQWISQGRDPIFQPPSPPK 542


>gi|14165274 golgi-associated microtubule-binding protein HOOK3
           [Homo sapiens]
          Length = 718

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 30/104 (28%), Positives = 40/104 (38%), Gaps = 10/104 (9%)

Query: 178 KKANEEHHRLLKGAPFKLNLHPRDYFDANPYFSEESLPPI-------KKEEKKKTISNTF 230
           KK  EEH   L  A  +L        D  P F+  SL          KKEE+ K +   +
Sbjct: 545 KKKLEEHLEKLHEANNELQKKRAIIEDLEPRFNNSSLKIEELQEALRKKEEEMKQMEERY 604

Query: 231 KPSSPGKKPGGMKAGTFDPYPSHSADPYVAKLANISGKDDKIFH 274
           K      K       T DP  +  A P +  L N   + D++FH
Sbjct: 605 KKYLEKAKS---VIRTLDPKQNQGAAPEIQALKNQLQERDRLFH 645


>gi|31083280 delta isoform of regulatory subunit B56, protein
           phosphatase 2A isoform 2 [Homo sapiens]
          Length = 570

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 19/59 (32%), Positives = 21/59 (35%)

Query: 218 KKEEKKKTISNTFKPSSPGKKPGGMKAGTFDPYPSHSADPYVAKLANISGKDDKIFHPP 276
           K++E  K    T KPSS GK  GG       P P     P        S K      PP
Sbjct: 7   KEKEPPKVAKCTAKPSSSGKDGGGENTEEAQPQPQPQPQPQAQSQPPSSNKRPSNSTPP 65


>gi|5453954 delta isoform of regulatory subunit B56, protein
           phosphatase 2A isoform 1 [Homo sapiens]
          Length = 602

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 19/59 (32%), Positives = 21/59 (35%)

Query: 218 KKEEKKKTISNTFKPSSPGKKPGGMKAGTFDPYPSHSADPYVAKLANISGKDDKIFHPP 276
           K++E  K    T KPSS GK  GG       P P     P        S K      PP
Sbjct: 7   KEKEPPKVAKCTAKPSSSGKDGGGENTEEAQPQPQPQPQPQAQSQPPSSNKRPSNSTPP 65


>gi|120587029 signal peptide, CUB domain, EGF-like 1 [Homo sapiens]
          Length = 988

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 27/118 (22%), Positives = 47/118 (39%), Gaps = 14/118 (11%)

Query: 120 PVPFFSAQSKPREKYKAPGKNLYTNPGKKGTGYGYANITIGKQFSHSADFYDAAKLKYKK 179
           P+ F S   K   ++K+       N G  G G+    +T  + +    +  D  +     
Sbjct: 878 PIAFTSRSRKLWIQFKS-------NEGNSGKGFQVPYVTYDEDYQQLIE--DIVRDGRLY 928

Query: 180 ANEEHHRLLKG-----APFKLNLHPRDYFDANPYFSEESLPPIKKEEKKKTISNTFKP 232
           A+E H  +LK      A F +  HP++YF      S+E  P    +  +  +S   +P
Sbjct: 929 ASENHQEILKDKKLIKALFDVLAHPQNYFKYTAQESKEMFPRSFIKLLRSKVSRFLRP 986


>gi|26051240 tumor necrosis factor, alpha-induced protein 2 [Homo
           sapiens]
          Length = 654

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 2/39 (5%)

Query: 205 ANPYFSEESLPPIKKEEKKKT--ISNTFKPSSPGKKPGG 241
           A PY  EE     KKE+KKK+  ++N F   + GKK  G
Sbjct: 17  AAPYREEEEAAKKKKEKKKKSKGLANVFCVFTKGKKKKG 55


>gi|69354859 ADAM metallopeptidase domain 8 precursor [Homo sapiens]
          Length = 856

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 6/69 (8%)

Query: 214 LPPIKKEEKKKTISNTFKPSSPGKKPGGMKAGTFDPYPSHSA-DPYVAKLANISGKDDKI 272
           +P   ++  K+ I  TF P  P  KPG   AG  +P P+  A  P VA    I  K    
Sbjct: 763 VPVYTRQAPKQVIKPTFAPPVPPVKPG---AGAANPGPAEGAVGPKVALKPPIQRKQGAE 819

Query: 273 F--HPPSGP 279
              HP   P
Sbjct: 820 LPQHPRGAP 828


>gi|117414154 sodium channel associated protein 2 isoform b [Homo
           sapiens]
          Length = 939

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 13/49 (26%), Positives = 25/49 (51%)

Query: 161 KQFSHSADFYDAAKLKYKKANEEHHRLLKGAPFKLNLHPRDYFDANPYF 209
           ++F   ADF DA   +  K  ++H +++K    K+++  + Y D    F
Sbjct: 502 REFFTDADFQDALAKEIAKEEKKHEQMIKEYQEKIDVLSQQYMDLENEF 550


>gi|117414162 sodium channel associated protein 2 isoform a [Homo
           sapiens]
          Length = 1032

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 13/49 (26%), Positives = 25/49 (51%)

Query: 161 KQFSHSADFYDAAKLKYKKANEEHHRLLKGAPFKLNLHPRDYFDANPYF 209
           ++F   ADF DA   +  K  ++H +++K    K+++  + Y D    F
Sbjct: 595 REFFTDADFQDALAKEIAKEEKKHEQMIKEYQEKIDVLSQQYMDLENEF 643


>gi|20911035 peptidylprolyl isomerase-like 4 [Homo sapiens]
          Length = 492

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 4/76 (5%)

Query: 93  NLGKAFLPSNGEKKPCGLG--SYYGTI-GGPVPFFSAQSKPREKYKAPGKNLYTNPGKKG 149
           N+ + F+   G+    G G  S +G + G    FF A+  PR K+K  G     N G   
Sbjct: 44  NVQRDFIIQTGDPTGTGRGGESIFGQLYGDQASFFEAEKVPRIKHKKKGTVSMVNNGSDQ 103

Query: 150 TGYGYANITIGKQFSH 165
            G  +  IT G+   +
Sbjct: 104 HGSQFL-ITTGENLDY 118


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.313    0.134    0.394 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,997,451
Number of Sequences: 37866
Number of extensions: 719655
Number of successful extensions: 1382
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1371
Number of HSP's gapped (non-prelim): 13
length of query: 309
length of database: 18,247,518
effective HSP length: 102
effective length of query: 207
effective length of database: 14,385,186
effective search space: 2977733502
effective search space used: 2977733502
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.