Search of human proteins with 166197660

Search of human proteins with 166197660

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|166197660 complement component 8, gamma polypeptide [Homo
sapiens]
         (202 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|166197660 complement component 8, gamma polypeptide [Homo sap...   404   e-113
gi|42714611 lipocalin 15 [Homo sapiens]                                67   8e-12
gi|4502067 alpha-1-microglobulin/bikunin preproprotein [Homo sap...    66   2e-11
gi|32171249 prostaglandin H2 D-isomerase [Homo sapiens]                47   1e-05
gi|169177936 PREDICTED: similar to hCG1795014 [Homo sapiens]           45   3e-05
gi|169179152 PREDICTED: similar to hCG1795014 [Homo sapiens]           45   3e-05
gi|169181274 PREDICTED: similar to hCG1795014 [Homo sapiens]           45   3e-05
gi|38455402 lipocalin 2 [Homo sapiens]                                 37   0.009
gi|55743122 retinol-binding protein 4, plasma precursor [Homo sa...    32   0.37 
gi|41393547 neuroblastoma-amplified protein [Homo sapiens]             30   1.1  
gi|188528648 tenascin XB isoform 1 precursor [Homo sapiens]            30   1.4  
gi|223555963 Hsp70 subfamily B suppressor 1-like protein isoform...    29   3.1  
gi|5729864 Hsp70 subfamily B suppressor 1-like protein isoform 1...    29   3.1  
gi|239756131 PREDICTED: hypothetical protein XP_002344814 [Homo ...    28   5.3  
gi|239750660 PREDICTED: hypothetical protein [Homo sapiens]            28   5.3  
gi|239744968 PREDICTED: hypothetical protein XP_002343345 [Homo ...    28   5.3  
gi|148226288 lipocalin-like 1 [Homo sapiens]                           28   5.3  

>gi|166197660 complement component 8, gamma polypeptide [Homo
           sapiens]
          Length = 202

 Score =  404 bits (1037), Expect = e-113
 Identities = 202/202 (100%), Positives = 202/202 (100%)

Query: 1   MLPPGTATLLTLLLAAGSLGQKPQRPRRPASPISTIQPKANFDAQQFAGTWLLVAVGSAC 60
           MLPPGTATLLTLLLAAGSLGQKPQRPRRPASPISTIQPKANFDAQQFAGTWLLVAVGSAC
Sbjct: 1   MLPPGTATLLTLLLAAGSLGQKPQRPRRPASPISTIQPKANFDAQQFAGTWLLVAVGSAC 60

Query: 61  RFLQEQGHRAEATTLHVAPQGTAMAVSTFRKLDGICWQVRQLYGDTGVLGRFLLQARDAR 120
           RFLQEQGHRAEATTLHVAPQGTAMAVSTFRKLDGICWQVRQLYGDTGVLGRFLLQARDAR
Sbjct: 61  RFLQEQGHRAEATTLHVAPQGTAMAVSTFRKLDGICWQVRQLYGDTGVLGRFLLQARDAR 120

Query: 121 GAVHVVVAETDYQSFAVLYLERAGQLSVKLYARSLPVSDSVLSGFEQRVQEAHLTEDQIF 180
           GAVHVVVAETDYQSFAVLYLERAGQLSVKLYARSLPVSDSVLSGFEQRVQEAHLTEDQIF
Sbjct: 121 GAVHVVVAETDYQSFAVLYLERAGQLSVKLYARSLPVSDSVLSGFEQRVQEAHLTEDQIF 180

Query: 181 YFPKYGFCEAADQFHVLDEVRR 202
           YFPKYGFCEAADQFHVLDEVRR
Sbjct: 181 YFPKYGFCEAADQFHVLDEVRR 202


>gi|42714611 lipocalin 15 [Homo sapiens]
          Length = 184

 Score = 67.4 bits (163), Expect = 8e-12
 Identities = 54/159 (33%), Positives = 81/159 (50%), Gaps = 12/159 (7%)

Query: 36  IQPKANFDAQQFAGTWLLVAVGSACR-FLQEQGHRAEAT-TLHVAPQGTAMAVSTFRKLD 93
           +QP  +F+A++F+G W +V++ S CR FL ++ H + +T  +    +G       F   D
Sbjct: 24  LQP--DFNAEKFSGLWYVVSMASDCRVFLGKKDHLSMSTRAIRPTEEGGLHVHMEFPGAD 81

Query: 94  GICWQVRQLYGDTGVLGRFLLQARDARGAVHVVVAETDYQSFAVLYL--ERAGQLS--VK 149
           G C QV   Y   G  G F +    A G + V + +TDY SFAVLY+  E  G LS  V+
Sbjct: 82  G-CNQVDAEYLKVGSEGHFRV---PALGYLDVRIVDTDYSSFAVLYIYKELEGALSTMVQ 137

Query: 150 LYARSLPVSDSVLSGFEQRVQEAHLTEDQIFYFPKYGFC 188
           LY+R+  VS   L  F+       L +D +   P+   C
Sbjct: 138 LYSRTQDVSPQALKSFQDFYPTLGLPKDMMVMLPQSDAC 176


>gi|4502067 alpha-1-microglobulin/bikunin preproprotein [Homo
           sapiens]
          Length = 352

 Score = 65.9 bits (159), Expect = 2e-11
 Identities = 50/196 (25%), Positives = 82/196 (41%), Gaps = 14/196 (7%)

Query: 5   GTATLLTLLLAAGSLGQKPQRPRRPASPISTIQPKANFDAQQFAGTWLLVAVGSACRFLQ 64
           G   LL     A S G  P       +P   IQ + NF+  +  G W  +A+GS C +L+
Sbjct: 5   GALLLLLSACLAVSAGPVP-------TPPDNIQVQENFNISRIYGKWYNLAIGSTCPWLK 57

Query: 65  EQGHRAEATTLHVAPQGTAMAVS--TFRKLDGICWQVRQLYGDTGVLGRFLLQARDARGA 122
           +   R   +TL +    T   +S  + R   G+C +    Y  T   G+FL         
Sbjct: 58  KIMDRMTVSTLVLGEGATEAEISMTSTRWRKGVCEETSGAYEKTDTDGKFLYHKSKWNIT 117

Query: 123 VHVVVAETDYQSFAVLYLERAGQ-----LSVKLYARSLPVSDSVLSGFEQRVQEAHLTED 177
           +   V  T+Y  +A+   ++  +     ++ KLY R+  + +++L  F    Q   + ED
Sbjct: 118 MESYVVHTNYDEYAIFLTKKFSRHHGPTITAKLYGRAPQLRETLLQDFRVVAQGVGIPED 177

Query: 178 QIFYFPKYGFCEAADQ 193
            IF     G C   +Q
Sbjct: 178 SIFTMADRGECVPGEQ 193


>gi|32171249 prostaglandin H2 D-isomerase [Homo sapiens]
          Length = 190

 Score = 46.6 bits (109), Expect = 1e-05
 Identities = 50/189 (26%), Positives = 75/189 (39%), Gaps = 11/189 (5%)

Query: 7   ATLLTLLLAAGSLGQKPQRPRRPASPISTIQPKANFDAQQFAGTWLLVAVGSACRFLQEQ 66
           AT  TL +    LG        P + +S +QP  NF   +F G W    + S   +L+E+
Sbjct: 2   ATHHTLWMGLALLGVLGDLQAAPEAQVS-VQP--NFQQDKFLGRWFSAGLASNSSWLREK 58

Query: 67  GHRAEATTLHVAP--QGTAMAVSTFRKLDGICWQVRQLYGDTGVLGRFLLQARDARGAVH 124
                     VAP   G     STF + +  C     L    G LG +  ++        
Sbjct: 59  KAALSMCKSVVAPATDGGLNLTSTFLRKNQ-CETRTMLLQPAGSLGSYSYRSPHWGSTYS 117

Query: 125 VVVAETDYQSFAVLYLERA---GQ--LSVKLYARSLPVSDSVLSGFEQRVQEAHLTEDQI 179
           V V ETDY  +A+LY + +   G+      LY+R+      +   F    +    TED I
Sbjct: 118 VSVVETDYDQYALLYSQGSKGPGEDFRMATLYSRTQTPRAELKEKFTAFCKAQGFTEDTI 177

Query: 180 FYFPKYGFC 188
            + P+   C
Sbjct: 178 VFLPQTDKC 186


>gi|169177936 PREDICTED: similar to hCG1795014 [Homo sapiens]
          Length = 181

 Score = 45.4 bits (106), Expect = 3e-05
 Identities = 39/159 (24%), Positives = 68/159 (42%), Gaps = 11/159 (6%)

Query: 40  ANFDAQQFAGTWLLVAVGSACRFLQEQGHRAEATTLHVAPQGTAMAVSTFRKLDGICWQV 99
           +NFD  + +G W  V + S CR   E+         H+   G +   S   KL+G C ++
Sbjct: 26  SNFDLSKISGEWYSVLLASDCREKIEEDGSMRVFVKHIDYLGNS---SLTFKLNGNCTEI 82

Query: 100 RQLYGDTGVLGRFLLQARDARGAVHVVVAETDYQSFAVLYLERAGQ----LSVKLYARSL 155
                 T    +  + + D  G   + + ETDY ++   Y +        L ++LY R+ 
Sbjct: 83  NLACKPT---EKNAICSTDYNGLNVIDILETDYDNYIYFYNKNIKNGETFLMLELYVRTP 139

Query: 156 PVSDSVLSGFEQRVQEAHLTEDQIFYFPKYGFC-EAADQ 193
            VS  +   F +  +E  + ++ IF   K   C +A D+
Sbjct: 140 DVSSQLKERFVKYCEEHGIDKENIFDLTKVDRCLQARDE 178


>gi|169179152 PREDICTED: similar to hCG1795014 [Homo sapiens]
          Length = 181

 Score = 45.4 bits (106), Expect = 3e-05
 Identities = 39/159 (24%), Positives = 68/159 (42%), Gaps = 11/159 (6%)

Query: 40  ANFDAQQFAGTWLLVAVGSACRFLQEQGHRAEATTLHVAPQGTAMAVSTFRKLDGICWQV 99
           +NFD  + +G W  V + S CR   E+         H+   G +   S   KL+G C ++
Sbjct: 26  SNFDLSKISGEWYSVLLASDCREKIEEDGSMRVFVKHIDYLGNS---SLTFKLNGNCTEI 82

Query: 100 RQLYGDTGVLGRFLLQARDARGAVHVVVAETDYQSFAVLYLERAGQ----LSVKLYARSL 155
                 T    +  + + D  G   + + ETDY ++   Y +        L ++LY R+ 
Sbjct: 83  NLACKPT---EKNAICSTDYNGLNVIDILETDYDNYIYFYNKNIKNGETFLMLELYVRTP 139

Query: 156 PVSDSVLSGFEQRVQEAHLTEDQIFYFPKYGFC-EAADQ 193
            VS  +   F +  +E  + ++ IF   K   C +A D+
Sbjct: 140 DVSSQLKERFVKYCEEHGIDKENIFDLTKVDRCLQARDE 178


>gi|169181274 PREDICTED: similar to hCG1795014 [Homo sapiens]
          Length = 181

 Score = 45.4 bits (106), Expect = 3e-05
 Identities = 39/159 (24%), Positives = 68/159 (42%), Gaps = 11/159 (6%)

Query: 40  ANFDAQQFAGTWLLVAVGSACRFLQEQGHRAEATTLHVAPQGTAMAVSTFRKLDGICWQV 99
           +NFD  + +G W  V + S CR   E+         H+   G +   S   KL+G C ++
Sbjct: 26  SNFDLSKISGEWYSVLLASDCREKIEEDGSMRVFVKHIDYLGNS---SLTFKLNGNCTEI 82

Query: 100 RQLYGDTGVLGRFLLQARDARGAVHVVVAETDYQSFAVLYLERAGQ----LSVKLYARSL 155
                 T    +  + + D  G   + + ETDY ++   Y +        L ++LY R+ 
Sbjct: 83  NLACKPT---EKNAICSTDYNGLNVIDILETDYDNYIYFYNKNIKNGETFLMLELYVRTP 139

Query: 156 PVSDSVLSGFEQRVQEAHLTEDQIFYFPKYGFC-EAADQ 193
            VS  +   F +  +E  + ++ IF   K   C +A D+
Sbjct: 140 DVSSQLKERFVKYCEEHGIDKENIFDLTKVDRCLQARDE 178


>gi|38455402 lipocalin 2 [Homo sapiens]
          Length = 198

 Score = 37.4 bits (85), Expect = 0.009
 Identities = 37/179 (20%), Positives = 73/179 (40%), Gaps = 7/179 (3%)

Query: 10  LTLLLAAGSLGQKPQRPRRPASPISTIQPKANFDAQQFAGTWLLVAVGSACRFLQEQGHR 69
           L LL A  +  Q       PA P+S +  + NF   QF G W +V +       +++  +
Sbjct: 10  LALLGALHAQAQDSTSDLIPAPPLSKVPLQQNFQDNQFQGKWYVVGLAGNAILREDKDPQ 69

Query: 70  AEATTLHVAPQGTAMAVST--FRKLDGICWQVRQLYG-DTGVLGRFLLQARDARGAVHVV 126
               T++   +  +  V++  FRK     W    + G   G      +++     +  V 
Sbjct: 70  KMYATIYELKEDKSYNVTSVLFRKKKCDYWIRTFVPGCQPGEFTLGNIKSYPGLTSYLVR 129

Query: 127 VAETDYQSFAVLYLERAGQ----LSVKLYARSLPVSDSVLSGFEQRVQEAHLTEDQIFY 181
           V  T+Y   A+++ ++  Q      + LY R+  ++  +   F +  +   L E+ I +
Sbjct: 130 VVSTNYNQHAMVFFKKVSQNREYFKITLYGRTKELTSELKENFIRFSKSLGLPENHIVF 188


>gi|55743122 retinol-binding protein 4, plasma precursor [Homo
           sapiens]
          Length = 201

 Score = 32.0 bits (71), Expect = 0.37
 Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 13/135 (9%)

Query: 12  LLLAAGSLGQKPQRPRRPASPISTIQPKANFDAQQFAGTWLLVAVGSACRFLQEQGHRAE 71
           LLLAA   G+  +  R     +S+ + K NFD  +F+GTW  +A         +    AE
Sbjct: 8   LLLAALGSGRAERDCR-----VSSFRVKENFDKARFSGTWYAMAKKDPEGLFLQDNIVAE 62

Query: 72  ATTLHVAPQGTAMAVSTFRKLDG--ICWQVRQLYGDTGVLGRFLLQARDA-----RGAVH 124
             ++    Q +A A    R L+   +C  +   + DT    +F ++         +G   
Sbjct: 63  -FSVDETGQMSATAKGRVRLLNNWDVCADMVGTFTDTEDPAKFKMKYWGVASFLQKGNDD 121

Query: 125 VVVAETDYQSFAVLY 139
             + +TDY ++AV Y
Sbjct: 122 HWIVDTDYDTYAVQY 136


>gi|41393547 neuroblastoma-amplified protein [Homo sapiens]
          Length = 2371

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 3/41 (7%)

Query: 49   GTWLLVAVGSACRFLQEQGHRAEATTLHVAPQGTAMAVSTF 89
            G W    +G   R L+E GH AEA +L +A +GT  A  TF
Sbjct: 2323 GRWDAEELG---RHLREAGHEAEAGSLLLAVRGTHQAFRTF 2360


>gi|188528648 tenascin XB isoform 1 precursor [Homo sapiens]
          Length = 4242

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 6/80 (7%)

Query: 73   TTLHVAPQGTAMAVSTFRKLD-GICWQVRQLYGDTGVLGRFLLQARDARGAVHVVVAETD 131
            T L V P+   +AV+       G+ W V Q     G    FL+Q RDA+G    V    D
Sbjct: 3255 TPLPVEPRLGELAVAAVTSDSVGLSWTVAQ-----GPFDSFLVQYRDAQGQPQAVPVSGD 3309

Query: 132  YQSFAVLYLERAGQLSVKLY 151
             ++ AV  L+ A +    L+
Sbjct: 3310 LRAVAVSGLDPARKYKFLLF 3329


>gi|223555963 Hsp70 subfamily B suppressor 1-like protein isoform 2
           [Homo sapiens]
          Length = 642

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 17/52 (32%), Positives = 21/52 (40%)

Query: 65  EQGHRAEATTLHVAPQGTAMAVSTFRKLDGICWQVRQLYGDTGVLGRFLLQA 116
           E G +     L V   G         K+D + WQ  +    TG LG FL QA
Sbjct: 339 ETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQERFQEITGKLGHFLKQA 390


>gi|5729864 Hsp70 subfamily B suppressor 1-like protein isoform 1
           [Homo sapiens]
          Length = 684

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 17/52 (32%), Positives = 21/52 (40%)

Query: 65  EQGHRAEATTLHVAPQGTAMAVSTFRKLDGICWQVRQLYGDTGVLGRFLLQA 116
           E G +     L V   G         K+D + WQ  +    TG LG FL QA
Sbjct: 381 ETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQERFQEITGKLGHFLKQA 432


>gi|239756131 PREDICTED: hypothetical protein XP_002344814 [Homo
          sapiens]
          Length = 168

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 4/62 (6%)

Query: 9  LLTLLLAAGSLGQ-KPQRPRRPASPISTI---QPKANFDAQQFAGTWLLVAVGSACRFLQ 64
          LL    AAG+ G  + +RPRR  SP+S+     P   +  +   G+W + AV +A R L 
Sbjct: 11 LLRASQAAGATGSDQRKRPRRSTSPLSSRVSHTPATCWGLKFKMGSWNIEAVPAAARALS 70

Query: 65 EQ 66
           +
Sbjct: 71 PE 72


>gi|239750660 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 168

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 4/62 (6%)

Query: 9  LLTLLLAAGSLGQ-KPQRPRRPASPISTI---QPKANFDAQQFAGTWLLVAVGSACRFLQ 64
          LL    AAG+ G  + +RPRR  SP+S+     P   +  +   G+W + AV +A R L 
Sbjct: 11 LLRASQAAGATGSDQRKRPRRSTSPLSSRVSHTPATCWGLKFKMGSWNIEAVPAAARALS 70

Query: 65 EQ 66
           +
Sbjct: 71 PE 72


>gi|239744968 PREDICTED: hypothetical protein XP_002343345 [Homo
          sapiens]
          Length = 168

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 4/62 (6%)

Query: 9  LLTLLLAAGSLGQ-KPQRPRRPASPISTI---QPKANFDAQQFAGTWLLVAVGSACRFLQ 64
          LL    AAG+ G  + +RPRR  SP+S+     P   +  +   G+W + AV +A R L 
Sbjct: 11 LLRASQAAGATGSDQRKRPRRSTSPLSSRVSHTPATCWGLKFKMGSWNIEAVPAAARALS 70

Query: 65 EQ 66
           +
Sbjct: 71 PE 72


>gi|148226288 lipocalin-like 1 [Homo sapiens]
          Length = 164

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 3/48 (6%)

Query: 94  GICWQVRQLYGDTGVLGRFLLQARDARGAVHVVVAETDYQSFAVLYLE 141
           G C ++   + +  V G+F   +  A     + VA +DYQ FA+LYLE
Sbjct: 44  GGCQKMDTTFTEGAVPGQF---SNPAMALSDIRVAFSDYQHFALLYLE 88


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.323    0.136    0.405 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,513,725
Number of Sequences: 37866
Number of extensions: 305767
Number of successful extensions: 816
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 800
Number of HSP's gapped (non-prelim): 19
length of query: 202
length of database: 18,247,518
effective HSP length: 97
effective length of query: 105
effective length of database: 14,574,516
effective search space: 1530324180
effective search space used: 1530324180
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.