Guide to the Human Genome
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Search of human proteins with 163965371

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|163965371 putative thiosulfate sulfurtransferase KAT isoform
3 [Homo sapiens]
         (109 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|163965371 putative thiosulfate sulfurtransferase KAT isoform ...   214   9e-57
gi|163965377 putative thiosulfate sulfurtransferase KAT isoform ...   193   3e-50
gi|163965375 putative thiosulfate sulfurtransferase KAT isoform ...   111   1e-25
gi|169169157 PREDICTED: hypothetical protein LOC100130890 isofor...    44   4e-05
gi|169168771 PREDICTED: hypothetical protein LOC100130890 isofor...    44   4e-05
gi|169169260 PREDICTED: hypothetical protein LOC100130890 isofor...    44   4e-05
gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor ...    32   0.14 
gi|61835204 mercaptopyruvate sulfurtransferase isoform 2 [Homo s...    31   0.19 
gi|194473681 mercaptopyruvate sulfurtransferase isoform 2 [Homo ...    31   0.19 
gi|194473668 mercaptopyruvate sulfurtransferase isoform 1 [Homo ...    31   0.19 
gi|7657339 molybdenum cofactor synthesis 3 [Homo sapiens]              30   0.32 
gi|63252863 BTB (POZ) domain containing 12 [Homo sapiens]              29   0.71 
gi|40018640 parafibromin [Homo sapiens]                                28   1.2  
gi|169171887 PREDICTED: hypothetical protein LOC154860 [Homo sap...    28   1.2  
gi|169171120 PREDICTED: hypothetical protein LOC154860 [Homo sap...    28   1.2  
gi|169170630 PREDICTED: hypothetical protein LOC154860 [Homo sap...    28   1.2  
gi|197313638 N-methyl-D-aspartate receptor subunit 2A isoform 2 ...    28   2.1  
gi|197313636 N-methyl-D-aspartate receptor subunit 2A isoform 1 ...    28   2.1  
gi|4504125 N-methyl-D-aspartate receptor subunit 2A isoform 1 pr...    28   2.1  
gi|34147456 TBC domain-containing protein kinase-like [Homo sapi...    28   2.1  
gi|239753274 PREDICTED: hypothetical protein [Homo sapiens]            27   2.7  
gi|239747844 PREDICTED: hypothetical protein XP_002346445 [Homo ...    27   2.7  
gi|167003331 N-methyl-D-aspartate receptor subunit 2B precursor ...    27   4.6  
gi|153945755 zinc finger protein 608 [Homo sapiens]                    26   6.0  
gi|194394237 villin 1 [Homo sapiens]                                   26   7.9  
gi|4759336 Fanconi anemia, complementation group G [Homo sapiens]      26   7.9  
gi|8393009 chromosome 11 open reading frame2 [Homo sapiens]            26   7.9  
gi|32699028 V-set and immunoglobulin domain containing 1 [Homo s...    26   7.9  

>gi|163965371 putative thiosulfate sulfurtransferase KAT isoform 3
           [Homo sapiens]
          Length = 109

 Score =  214 bits (546), Expect = 9e-57
 Identities = 109/109 (100%), Positives = 109/109 (100%)

Query: 1   MAGAPTVSLPELRSLLASGRARLFDVRSREEAAAGTIPGALNIPVSELESALQMEPAAFQ 60
           MAGAPTVSLPELRSLLASGRARLFDVRSREEAAAGTIPGALNIPVSELESALQMEPAAFQ
Sbjct: 1   MAGAPTVSLPELRSLLASGRARLFDVRSREEAAAGTIPGALNIPVSELESALQMEPAAFQ 60

Query: 61  ALYSAEKPKLEDEHLVFFCQMGKRGLQATQLARSLGYTGYGEVWLLAGR 109
           ALYSAEKPKLEDEHLVFFCQMGKRGLQATQLARSLGYTGYGEVWLLAGR
Sbjct: 61  ALYSAEKPKLEDEHLVFFCQMGKRGLQATQLARSLGYTGYGEVWLLAGR 109


>gi|163965377 putative thiosulfate sulfurtransferase KAT isoform 1
          [Homo sapiens]
          Length = 115

 Score =  193 bits (490), Expect = 3e-50
 Identities = 99/99 (100%), Positives = 99/99 (100%)

Query: 1  MAGAPTVSLPELRSLLASGRARLFDVRSREEAAAGTIPGALNIPVSELESALQMEPAAFQ 60
          MAGAPTVSLPELRSLLASGRARLFDVRSREEAAAGTIPGALNIPVSELESALQMEPAAFQ
Sbjct: 1  MAGAPTVSLPELRSLLASGRARLFDVRSREEAAAGTIPGALNIPVSELESALQMEPAAFQ 60

Query: 61 ALYSAEKPKLEDEHLVFFCQMGKRGLQATQLARSLGYTG 99
          ALYSAEKPKLEDEHLVFFCQMGKRGLQATQLARSLGYTG
Sbjct: 61 ALYSAEKPKLEDEHLVFFCQMGKRGLQATQLARSLGYTG 99


>gi|163965375 putative thiosulfate sulfurtransferase KAT isoform 2
          [Homo sapiens]
          Length = 74

 Score =  111 bits (277), Expect = 1e-25
 Identities = 55/55 (100%), Positives = 55/55 (100%)

Query: 45 VSELESALQMEPAAFQALYSAEKPKLEDEHLVFFCQMGKRGLQATQLARSLGYTG 99
          VSELESALQMEPAAFQALYSAEKPKLEDEHLVFFCQMGKRGLQATQLARSLGYTG
Sbjct: 4  VSELESALQMEPAAFQALYSAEKPKLEDEHLVFFCQMGKRGLQATQLARSLGYTG 58


>gi|169169157 PREDICTED: hypothetical protein LOC100130890 isoform
          1 [Homo sapiens]
          Length = 97

 Score = 43.5 bits (101), Expect = 4e-05
 Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 1/67 (1%)

Query: 7  VSLPELRSLLASGRARLFDVRSREEAAA-GTIPGALNIPVSELESALQMEPAAFQALYSA 65
          V+  EL++LL S    L DVR   E      IP ++N+P+ E+  ALQM P  F+  Y+ 
Sbjct: 30 VTYKELKNLLNSKNIMLIDVREIWEILEYQKIPESINVPLDEVGEALQMNPRDFKEKYNE 89

Query: 66 EKPKLED 72
           KP   D
Sbjct: 90 VKPSKSD 96


>gi|169168771 PREDICTED: hypothetical protein LOC100130890 isoform
          1 [Homo sapiens]
          Length = 97

 Score = 43.5 bits (101), Expect = 4e-05
 Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 1/67 (1%)

Query: 7  VSLPELRSLLASGRARLFDVRSREEAAA-GTIPGALNIPVSELESALQMEPAAFQALYSA 65
          V+  EL++LL S    L DVR   E      IP ++N+P+ E+  ALQM P  F+  Y+ 
Sbjct: 30 VTYKELKNLLNSKNIMLIDVREIWEILEYQKIPESINVPLDEVGEALQMNPRDFKEKYNE 89

Query: 66 EKPKLED 72
           KP   D
Sbjct: 90 VKPSKSD 96


>gi|169169260 PREDICTED: hypothetical protein LOC100130890 isoform
          1 [Homo sapiens]
          Length = 97

 Score = 43.5 bits (101), Expect = 4e-05
 Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 1/67 (1%)

Query: 7  VSLPELRSLLASGRARLFDVRSREEAAA-GTIPGALNIPVSELESALQMEPAAFQALYSA 65
          V+  EL++LL S    L DVR   E      IP ++N+P+ E+  ALQM P  F+  Y+ 
Sbjct: 30 VTYKELKNLLNSKNIMLIDVREIWEILEYQKIPESINVPLDEVGEALQMNPRDFKEKYNE 89

Query: 66 EKPKLED 72
           KP   D
Sbjct: 90 VKPSKSD 96


>gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor
           [Homo sapiens]
          Length = 1336

 Score = 31.6 bits (70), Expect = 0.14
 Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 1/62 (1%)

Query: 47  ELESALQMEPAAFQALYSAEKPKLEDEHLVFFCQMGKRGLQATQLARSLGYTGYGEVWLL 106
           E   AL ++P A +A+ SA+   +  +  + FC   +      + A   G TG G VW +
Sbjct: 216 EHRGALTLDPGAGEAVLSAQLRSVSAQIRLLFCAR-EEAEPVFRAAEEAGLTGSGYVWFM 274

Query: 107 AG 108
            G
Sbjct: 275 VG 276


>gi|61835204 mercaptopyruvate sulfurtransferase isoform 2 [Homo
           sapiens]
          Length = 297

 Score = 31.2 bits (69), Expect = 0.19
 Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 3/68 (4%)

Query: 17  ASGRARLFDVRSREEAAAGTIPGALNIPVSEL--ESALQMEPAAFQALYSAEKPKLEDEH 74
           A+GR R  +   R+    G IPG +NIP ++   +  L+  P   + L+  +K  L  + 
Sbjct: 185 ATGRFRGTEPEPRDGIEPGHIPGTVNIPFTDFLSQEGLEKSPEEIRHLFQEKKVDL-SKP 243

Query: 75  LVFFCQMG 82
           LV  C  G
Sbjct: 244 LVATCGSG 251


>gi|194473681 mercaptopyruvate sulfurtransferase isoform 2 [Homo
           sapiens]
          Length = 297

 Score = 31.2 bits (69), Expect = 0.19
 Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 3/68 (4%)

Query: 17  ASGRARLFDVRSREEAAAGTIPGALNIPVSEL--ESALQMEPAAFQALYSAEKPKLEDEH 74
           A+GR R  +   R+    G IPG +NIP ++   +  L+  P   + L+  +K  L  + 
Sbjct: 185 ATGRFRGTEPEPRDGIEPGHIPGTVNIPFTDFLSQEGLEKSPEEIRHLFQEKKVDL-SKP 243

Query: 75  LVFFCQMG 82
           LV  C  G
Sbjct: 244 LVATCGSG 251


>gi|194473668 mercaptopyruvate sulfurtransferase isoform 1 [Homo
           sapiens]
          Length = 317

 Score = 31.2 bits (69), Expect = 0.19
 Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 3/68 (4%)

Query: 17  ASGRARLFDVRSREEAAAGTIPGALNIPVSEL--ESALQMEPAAFQALYSAEKPKLEDEH 74
           A+GR R  +   R+    G IPG +NIP ++   +  L+  P   + L+  +K  L  + 
Sbjct: 205 ATGRFRGTEPEPRDGIEPGHIPGTVNIPFTDFLSQEGLEKSPEEIRHLFQEKKVDL-SKP 263

Query: 75  LVFFCQMG 82
           LV  C  G
Sbjct: 264 LVATCGSG 271


>gi|7657339 molybdenum cofactor synthesis 3 [Homo sapiens]
          Length = 460

 Score = 30.4 bits (67), Expect = 0.32
 Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 4/93 (4%)

Query: 7   VSLPELRSLLASGRARLF-DVRSREEAAAGTIPGALNIPVSELESALQMEPAAFQALYSA 65
           VS+ + + LL SG   L  DVR + E     +P AL+IP+  LE          +     
Sbjct: 336 VSVTDYKRLLDSGAFHLLLDVRPQVEVDICRLPHALHIPLKHLERRDAESLKLLKEAIWE 395

Query: 66  EKPKLEDEHLV---FFCQMGKRGLQATQLARSL 95
           EK   ++   V     C++G    +A ++ +SL
Sbjct: 396 EKQGTQEGAAVPIYVICKLGNDSQKAVKILQSL 428


>gi|63252863 BTB (POZ) domain containing 12 [Homo sapiens]
          Length = 1834

 Score = 29.3 bits (64), Expect = 0.71
 Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 8/69 (11%)

Query: 29  REEAAAGTIPGALNIPVSELESA----LQMEPAAFQALYSAEKPKLEDEHLVFFCQMGKR 84
           +EE  AG + G L  P  E ++A    LQ E A   A  SA    LE++ L FFCQ+ ++
Sbjct: 246 QEEMMAGNVYG-LGPPAPESDAAVALTLQQEFARVGA--SAHDDSLEEKGL-FFCQICQK 301

Query: 85  GLQATQLAR 93
            L A  + R
Sbjct: 302 NLSAMNVTR 310


>gi|40018640 parafibromin [Homo sapiens]
          Length = 531

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 12/100 (12%)

Query: 4   APTVSLPELRSLLASGRARLFDVRSREEAAAGTIPGALNIPVSELESALQMEPAAFQALY 63
           A T ++P +R      R  L    + E + + +I  +  + +  L+ + Q++ AA + L 
Sbjct: 78  AATENIPVVRR---PDRKDLLGYLNGEASTSASIDRSAPLEIG-LQRSTQVKRAADEVLA 133

Query: 64  SAEKPKLEDEHLVFF--------CQMGKRGLQATQLARSL 95
            A+KP++EDE  V           +  K G+  T+  RSL
Sbjct: 134 EAKKPRIEDEECVRLDKERLAARLEGHKEGIVQTEQIRSL 173


>gi|169171887 PREDICTED: hypothetical protein LOC154860 [Homo
           sapiens]
          Length = 137

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 4/38 (10%)

Query: 5   PTVSLPELRSLLASGRARLFDVRSREEAAAGTIPGALN 42
           PT + P +R+  A  RA     RS  EAAA T PGA++
Sbjct: 96  PTAAAPTVRAPAAQARAS----RSALEAAARTFPGAVS 129


>gi|169171120 PREDICTED: hypothetical protein LOC154860 [Homo
           sapiens]
          Length = 137

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 4/38 (10%)

Query: 5   PTVSLPELRSLLASGRARLFDVRSREEAAAGTIPGALN 42
           PT + P +R+  A  RA     RS  EAAA T PGA++
Sbjct: 96  PTAAAPTVRAPAAQARAS----RSALEAAARTFPGAVS 129


>gi|169170630 PREDICTED: hypothetical protein LOC154860 [Homo
           sapiens]
          Length = 137

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 4/38 (10%)

Query: 5   PTVSLPELRSLLASGRARLFDVRSREEAAAGTIPGALN 42
           PT + P +R+  A  RA     RS  EAAA T PGA++
Sbjct: 96  PTAAAPTVRAPAAQARAS----RSALEAAARTFPGAVS 129


>gi|197313638 N-methyl-D-aspartate receptor subunit 2A isoform 2
           precursor [Homo sapiens]
          Length = 1281

 Score = 27.7 bits (60), Expect = 2.1
 Identities = 13/60 (21%), Positives = 31/60 (51%), Gaps = 1/60 (1%)

Query: 47  ELESALQMEPAAFQALYSAEKPKLEDEHLVFFCQMGKRGLQATQLARSLGYTGYGEVWLL 106
           ++++ + ++ +   A    +  K+    ++ +C   +  L  ++ ARSLG TGY   W++
Sbjct: 199 DMQNVITLDTSFEDAKTQVQLKKIHSSVILLYCSKDEAVLILSE-ARSLGLTGYDFFWIV 257


>gi|197313636 N-methyl-D-aspartate receptor subunit 2A isoform 1
           precursor [Homo sapiens]
          Length = 1464

 Score = 27.7 bits (60), Expect = 2.1
 Identities = 13/60 (21%), Positives = 31/60 (51%), Gaps = 1/60 (1%)

Query: 47  ELESALQMEPAAFQALYSAEKPKLEDEHLVFFCQMGKRGLQATQLARSLGYTGYGEVWLL 106
           ++++ + ++ +   A    +  K+    ++ +C   +  L  ++ ARSLG TGY   W++
Sbjct: 199 DMQNVITLDTSFEDAKTQVQLKKIHSSVILLYCSKDEAVLILSE-ARSLGLTGYDFFWIV 257


>gi|4504125 N-methyl-D-aspartate receptor subunit 2A isoform 1
           precursor [Homo sapiens]
          Length = 1464

 Score = 27.7 bits (60), Expect = 2.1
 Identities = 13/60 (21%), Positives = 31/60 (51%), Gaps = 1/60 (1%)

Query: 47  ELESALQMEPAAFQALYSAEKPKLEDEHLVFFCQMGKRGLQATQLARSLGYTGYGEVWLL 106
           ++++ + ++ +   A    +  K+    ++ +C   +  L  ++ ARSLG TGY   W++
Sbjct: 199 DMQNVITLDTSFEDAKTQVQLKKIHSSVILLYCSKDEAVLILSE-ARSLGLTGYDFFWIV 257


>gi|34147456 TBC domain-containing protein kinase-like [Homo
           sapiens]
          Length = 830

 Score = 27.7 bits (60), Expect = 2.1
 Identities = 23/99 (23%), Positives = 42/99 (42%), Gaps = 6/99 (6%)

Query: 10  PELRSLLASGRARLFDVRSREEAAAGTIPGALNIPVSELESALQMEPAAFQALYSAEKPK 69
           P  ++  +  +  + D+R+ E+   G I G++NIP S   +A   E    Q  Y+A    
Sbjct: 720 PSKKTKSSKPKLLVVDIRNSEDFIRGHISGSINIPFS---AAFTAEGELTQGPYTAMLQN 776

Query: 70  LEDEHLVFFCQMGKRGLQATQLARSLGYTGYGEVWLLAG 108
            + + +V    + K      + A  L    Y  + +L G
Sbjct: 777 FKGKVIVIVGHVAK---HTAEFAAHLVKMKYPRICILDG 812


>gi|239753274 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 263

 Score = 27.3 bits (59), Expect = 2.7
 Identities = 13/23 (56%), Positives = 15/23 (65%)

Query: 17 ASGRARLFDVRSREEAAAGTIPG 39
          ASG +RL D R    AAAG +PG
Sbjct: 63 ASGGSRLGDQRQEVRAAAGQVPG 85


>gi|239747844 PREDICTED: hypothetical protein XP_002346445 [Homo
          sapiens]
          Length = 263

 Score = 27.3 bits (59), Expect = 2.7
 Identities = 13/23 (56%), Positives = 15/23 (65%)

Query: 17 ASGRARLFDVRSREEAAAGTIPG 39
          ASG +RL D R    AAAG +PG
Sbjct: 63 ASGGSRLGDQRQEVRAAAGQVPG 85


>gi|167003331 N-methyl-D-aspartate receptor subunit 2B precursor
           [Homo sapiens]
          Length = 1484

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 11/38 (28%), Positives = 21/38 (55%), Gaps = 1/38 (2%)

Query: 69  KLEDEHLVFFCQMGKRGLQATQLARSLGYTGYGEVWLL 106
           KL+   ++ +C   +      ++A S+G TGYG  W++
Sbjct: 222 KLQSPIILLYCTK-EEATYIFEVANSVGLTGYGYTWIV 258


>gi|153945755 zinc finger protein 608 [Homo sapiens]
          Length = 1512

 Score = 26.2 bits (56), Expect = 6.0
 Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 6/93 (6%)

Query: 2   AGAPTVSLPELRSLLASGRARLFDVRSREEAAA--GTIPGALNIPV-SELESALQMEPAA 58
           AG P  +    R L+++G   +   ++ + +    G      N+PV S + +AL    AA
Sbjct: 630 AGNPPGTPKGKRELMSNGPGSIIGAKAGKNSGKKKGLNNELNNLPVISNMTAALDSCSAA 689

Query: 59  FQALYSAEKPKLEDEHLVFFCQMG--KRGLQAT 89
             +L +AE PKLE E L+    +G  ++G +AT
Sbjct: 690 DGSL-AAEMPKLEAEGLIDKKNLGDKEKGKKAT 721


>gi|194394237 villin 1 [Homo sapiens]
          Length = 827

 Score = 25.8 bits (55), Expect = 7.9
 Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 7/81 (8%)

Query: 4   APTVSLPELRSLLASGRARLFDVRSR-----EEAAAGTIPGAL--NIPVSELESALQMEP 56
           +P V +    S L+SG   +F +        EE   G  P     ++ + +   A  M P
Sbjct: 747 SPKVDVFNANSNLSSGPLPIFPLEQLVNKPVEELPEGVDPSRKEEHLSIEDFTQAFGMTP 806

Query: 57  AAFQALYSAEKPKLEDEHLVF 77
           AAF AL   ++  L+ E  +F
Sbjct: 807 AAFSALPRWKQQNLKKEKGLF 827


>gi|4759336 Fanconi anemia, complementation group G [Homo sapiens]
          Length = 622

 Score = 25.8 bits (55), Expect = 7.9
 Identities = 17/71 (23%), Positives = 32/71 (45%), Gaps = 8/71 (11%)

Query: 39  GALNIPVSELESALQMEPAAFQALYSAEKPKLEDEHLVFFCQMGKRGLQATQLARSLGYT 98
           GA  + +SE    L++       L+ A  P+ +++   F C+ G +   A Q  R+    
Sbjct: 467 GAQKVAISEFSRCLEL-------LFRAT-PEEKEQGAAFNCEQGCKSDAALQQLRAAALI 518

Query: 99  GYGEVWLLAGR 109
             G  W+ +G+
Sbjct: 519 SRGLEWVASGQ 529


>gi|8393009 chromosome 11 open reading frame2 [Homo sapiens]
          Length = 782

 Score = 25.8 bits (55), Expect = 7.9
 Identities = 30/102 (29%), Positives = 41/102 (40%), Gaps = 10/102 (9%)

Query: 3   GAPTVSLPELRSLLASGRARLFDVRSREEAAAGTIPGALNIPV------SELESALQMEP 56
           G P   L E    LA  R RL       EA  G  P A ++        S     L    
Sbjct: 262 GEPAEELCE--EFLAHARGRLEKELRNLEAELGPSPPAPDVLEFTDHGGSGFVGGLCQVA 319

Query: 57  AAFQALYSAEKPKLEDEHLVFFCQMGKR--GLQATQLARSLG 96
           AA+Q L++A+ P   ++   F  Q+G R   L   +LA+  G
Sbjct: 320 AAYQELFAAQGPAGAEKLAAFARQLGSRYFALVERRLAQEQG 361


>gi|32699028 V-set and immunoglobulin domain containing 1 [Homo
           sapiens]
          Length = 387

 Score = 25.8 bits (55), Expect = 7.9
 Identities = 13/50 (26%), Positives = 25/50 (50%)

Query: 24  FDVRSREEAAAGTIPGALNIPVSELESALQMEPAAFQALYSAEKPKLEDE 73
           ++ +  +E A    PG+  + V +L+  L++EP     L    +P+ E E
Sbjct: 320 YEPKPTQEPAPEPAPGSEPMAVPDLDIELELEPETQSELEPEPEPEPESE 369


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.133    0.379 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,819,298
Number of Sequences: 37866
Number of extensions: 139761
Number of successful extensions: 479
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 465
Number of HSP's gapped (non-prelim): 28
length of query: 109
length of database: 18,247,518
effective HSP length: 79
effective length of query: 30
effective length of database: 15,256,104
effective search space: 457683120
effective search space used: 457683120
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
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