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Search of human proteins with 16306595
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|16306595 S-phase kinase-associated protein 2 isoform 1 [Homo
sapiens]
(424 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|16306595 S-phase kinase-associated protein 2 isoform 1 [Homo ... 859 0.0
gi|14249170 S-phase kinase-associated protein 2 isoform 2 [Homo ... 716 0.0
gi|27734755 F-box and leucine-rich repeat protein 20 [Homo sapiens] 81 2e-15
gi|16306582 F-box and leucine-rich repeat protein 2 [Homo sapiens] 80 3e-15
gi|6912466 F-box and leucine-rich repeat protein 7 [Homo sapiens] 75 1e-13
gi|54112382 F-box and leucine-rich repeat protein 10 isoform a [... 58 1e-08
gi|54112380 F-box and leucine-rich repeat protein 10 isoform b [... 57 2e-08
gi|16306588 F-box and leucine-rich repeat protein 4 [Homo sapiens] 57 3e-08
gi|161333854 F-box and leucine-rich repeat protein 13 isoform 2 ... 55 1e-07
gi|161333852 F-box and leucine-rich repeat protein 13 isoform 1 ... 55 1e-07
gi|16306580 F-box and leucine-rich repeat protein 11 [Homo sapiens] 53 5e-07
gi|8923179 F-box and leucine-rich repeat protein 12 [Homo sapiens] 52 8e-07
gi|16306576 F-box and leucine-rich repeat protein 6 isoform 1 [H... 51 2e-06
gi|190194416 F-box and leucine-rich repeat protein 15 [Homo sapi... 50 5e-06
gi|148922963 F-box and leucine-rich repeat protein 21 [Homo sapi... 49 7e-06
gi|157168349 F-box and leucine-rich repeat protein 19 [Homo sapi... 48 2e-05
gi|61742136 F-box and leucine-rich repeat protein 6 isoform 2 [H... 47 4e-05
gi|24025682 F-box and leucine-rich repeat protein 16 [Homo sapiens] 45 1e-04
gi|22748931 F-box and leucine-rich repeat protein 14 [Homo sapiens] 45 1e-04
gi|51873034 F-box and leucine-rich repeat protein 9 [Homo sapiens] 45 2e-04
gi|16306591 F-box and leucine-rich repeat protein 9 [Homo sapiens] 45 2e-04
gi|30089926 F-box only protein 11 isoform 1 [Homo sapiens] 44 4e-04
gi|30089924 F-box only protein 11 isoform 2 [Homo sapiens] 44 4e-04
gi|30089922 F-box only protein 11 isoform 3 [Homo sapiens] 44 4e-04
gi|164663798 antagonist of mitotic exit network 1 homolog [Homo ... 41 0.002
gi|229576894 F-box and WD repeat domain containing 12 isoform 2 ... 39 0.007
gi|229576873 F-box and WD repeat domain containing 12 isoform 1 ... 39 0.007
gi|219281831 F-box protein 15 isoform 2 [Homo sapiens] 37 0.034
gi|16306574 F-box and leucine-rich repeat protein 5 isoform 2 [H... 37 0.034
gi|16306572 F-box and leucine-rich repeat protein 5 isoform 1 [H... 37 0.034
>gi|16306595 S-phase kinase-associated protein 2 isoform 1 [Homo
sapiens]
Length = 424
Score = 859 bits (2220), Expect = 0.0
Identities = 424/424 (100%), Positives = 424/424 (100%)
Query: 1 MHRKHLQEIPDLSSNVATSFTWGWDSSKTSELLSGMGVSALEKEEPDSENIPQELLSNLG 60
MHRKHLQEIPDLSSNVATSFTWGWDSSKTSELLSGMGVSALEKEEPDSENIPQELLSNLG
Sbjct: 1 MHRKHLQEIPDLSSNVATSFTWGWDSSKTSELLSGMGVSALEKEEPDSENIPQELLSNLG 60
Query: 61 HPESPPRKRLKSKGSDKDFVIVRRPKLNRENFPGVSWDSLPDELLLGIFSCLCLPELLKV 120
HPESPPRKRLKSKGSDKDFVIVRRPKLNRENFPGVSWDSLPDELLLGIFSCLCLPELLKV
Sbjct: 61 HPESPPRKRLKSKGSDKDFVIVRRPKLNRENFPGVSWDSLPDELLLGIFSCLCLPELLKV 120
Query: 121 SGVCKRWYRLASDESLWQTLDLTGKNLHPDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSP 180
SGVCKRWYRLASDESLWQTLDLTGKNLHPDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSP
Sbjct: 121 SGVCKRWYRLASDESLWQTLDLTGKNLHPDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSP 180
Query: 181 FRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGC 240
FRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGC
Sbjct: 181 FRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGC 240
Query: 241 SGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKS 300
SGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKS
Sbjct: 241 SGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKS 300
Query: 301 DLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIP 360
DLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIP
Sbjct: 301 DLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIP 360
Query: 361 TLKTLQVFGIVPDGTLQLLKEALPHLQINCSHFTTIARPTIGNKKNQEIWGIKCRLTLQK 420
TLKTLQVFGIVPDGTLQLLKEALPHLQINCSHFTTIARPTIGNKKNQEIWGIKCRLTLQK
Sbjct: 361 TLKTLQVFGIVPDGTLQLLKEALPHLQINCSHFTTIARPTIGNKKNQEIWGIKCRLTLQK 420
Query: 421 PSCL 424
PSCL
Sbjct: 421 PSCL 424
>gi|14249170 S-phase kinase-associated protein 2 isoform 2 [Homo
sapiens]
Length = 410
Score = 716 bits (1849), Expect = 0.0
Identities = 354/354 (100%), Positives = 354/354 (100%)
Query: 1 MHRKHLQEIPDLSSNVATSFTWGWDSSKTSELLSGMGVSALEKEEPDSENIPQELLSNLG 60
MHRKHLQEIPDLSSNVATSFTWGWDSSKTSELLSGMGVSALEKEEPDSENIPQELLSNLG
Sbjct: 1 MHRKHLQEIPDLSSNVATSFTWGWDSSKTSELLSGMGVSALEKEEPDSENIPQELLSNLG 60
Query: 61 HPESPPRKRLKSKGSDKDFVIVRRPKLNRENFPGVSWDSLPDELLLGIFSCLCLPELLKV 120
HPESPPRKRLKSKGSDKDFVIVRRPKLNRENFPGVSWDSLPDELLLGIFSCLCLPELLKV
Sbjct: 61 HPESPPRKRLKSKGSDKDFVIVRRPKLNRENFPGVSWDSLPDELLLGIFSCLCLPELLKV 120
Query: 121 SGVCKRWYRLASDESLWQTLDLTGKNLHPDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSP 180
SGVCKRWYRLASDESLWQTLDLTGKNLHPDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSP
Sbjct: 121 SGVCKRWYRLASDESLWQTLDLTGKNLHPDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSP 180
Query: 181 FRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGC 240
FRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGC
Sbjct: 181 FRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGC 240
Query: 241 SGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKS 300
SGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKS
Sbjct: 241 SGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKS 300
Query: 301 DLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLL 354
DLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLL
Sbjct: 301 DLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLL 354
>gi|27734755 F-box and leucine-rich repeat protein 20 [Homo sapiens]
Length = 436
Score = 80.9 bits (198), Expect = 2e-15
Identities = 77/272 (28%), Positives = 123/272 (45%), Gaps = 23/272 (8%)
Query: 100 LPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQTLDLTGKNLHPDVTGRLLSQG 159
LP ELLL IFS L + L + + V + W LA D S WQ +DL + D+ GR++
Sbjct: 28 LPKELLLRIFSFLDVVTLCRCAQVSRAWNVLALDGSNWQRIDLF--DFQRDIEGRVVEN- 84
Query: 160 VIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEG-LRL 218
I+ RC L + + L C ++ L+L G +
Sbjct: 85 -ISKRCGGFLRKLSLRGCLG-------------VGDNALRTFAQNCRNIEVLNLNGCTKT 130
Query: 219 SDPIVNTLAK-NSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVA 277
+D +L+K S L L+L+ C+ + +L+ L C L++LN+SWC T+ +Q A
Sbjct: 131 TDATCTSLSKFCSKLRHLDLASCTSITNMSLKALSEGCPLLEQLNISWCDQVTKDGIQ-A 189
Query: 278 VAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQ-LNY 336
+ + L L G + L+ L + CP LV L+L + + ++ + +
Sbjct: 190 LVRGCGGLKALFLKGCTQ-LEDEALKYIGAHCPELVTLNLQTCLQITDEGLITICRGCHK 248
Query: 337 LQHLSLSRCYDIIPETLLELGE-IPTLKTLQV 367
LQ L S C +I L LG+ P L+ L+V
Sbjct: 249 LQSLCASGCSNITDAILNALGQNCPRLRILEV 280
Score = 47.8 bits (112), Expect = 2e-05
Identities = 50/226 (22%), Positives = 103/226 (45%), Gaps = 16/226 (7%)
Query: 193 IEVSTLHGILSQCSKLQNLSLEG-LRLSDPIVNTLAKNSN-LVRLNLSGCSGFSEFALQT 250
+E L I + C +L L+L+ L+++D + T+ + + L L SGCS ++ L
Sbjct: 208 LEDEALKYIGAHCPELVTLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNITDAILNA 267
Query: 251 LLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVR--- 307
L +C RL L ++ C T+ V ++ +L + +Q +D STL++
Sbjct: 268 LGQNCPRLRILEVARCSQLTD----VGFTTLARNCHELEKMDLEECVQITD-STLIQLSI 322
Query: 308 RCPNLVHLDLSDSVMLKNDCFQEF----FQLNYLQHLSLSRCYDIIPETLLELGEIPTLK 363
CP L L LS ++ +D + + L+ + L C I +L L +L+
Sbjct: 323 HCPRLQVLSLSHCELITDDGIRHLGNGACAHDQLEVIELDNCPLITDASLEHLKSCHSLE 382
Query: 364 TLQVFGI--VPDGTLQLLKEALPHLQINCSHFTTIARPTIGNKKNQ 407
++++ + ++ L+ LP+++++ P++G + +
Sbjct: 383 RIELYDCQQITRAGIKRLRTHLPNIKVHAYFAPVTPPPSVGGSRQR 428
>gi|16306582 F-box and leucine-rich repeat protein 2 [Homo sapiens]
Length = 423
Score = 80.5 bits (197), Expect = 3e-15
Identities = 78/281 (27%), Positives = 130/281 (46%), Gaps = 25/281 (8%)
Query: 91 NFPGVSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQTLDLTGKNLHPD 150
N G+ LP ELLL IFS L + L + + + K W LA D S WQ +DL N D
Sbjct: 6 NDEGLINKKLPKELLLRIFSFLDIVTLCRCAQISKAWNILALDGSNWQRIDLF--NFQID 63
Query: 151 VTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSV-IEVSTLHGILSQCSKLQ 209
V GR++ I+ RC ++ + L + + S+L C ++
Sbjct: 64 VEGRVVEN--ISKRCGGF--------------LRKLSLRGCIGVGDSSLKTFAQNCRNIE 107
Query: 210 NLSLEG-LRLSDPIVNTLAK-NSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCF 267
+L+L G +++D +L++ S L L+L+ C + +L+ + C L+ LNLSWC
Sbjct: 108 HLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVSITNSSLKGISEGCRNLEYLNLSWCD 167
Query: 268 DFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDC 327
T+ ++ A+ + L L G + L+ L + C LV L+L + ++
Sbjct: 168 QITKDGIE-ALVRGCRGLKALLLRGCTQ-LEDEALKHIQNYCHELVSLNLQSCSRITDEG 225
Query: 328 FQEFFQ-LNYLQHLSLSRCYDIIPETLLELG-EIPTLKTLQ 366
+ + + LQ L LS C ++ +L LG P L+ L+
Sbjct: 226 VVQICRGCHRLQALCLSGCSNLTDASLTALGLNCPRLQILE 266
Score = 48.9 bits (115), Expect = 9e-06
Identities = 44/178 (24%), Positives = 75/178 (42%), Gaps = 35/178 (19%)
Query: 222 IVNTLAKNSN--LVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVA 279
+V ++K L +L+L GC G + +L+T +C ++ LNL+ C T+
Sbjct: 68 VVENISKRCGGFLRKLSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITD-------- 119
Query: 280 HVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQ-LNYLQ 338
S +L R C L HLDL+ V + N + + L+
Sbjct: 120 --------------------STCYSLSRFCSKLKHLDLTSCVSITNSSLKGISEGCRNLE 159
Query: 339 HLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDGTLQLLKEALPHLQINCSHFTTI 396
+L+LS C I + + L + + L+ ++ G QL EAL H+Q C ++
Sbjct: 160 YLNLSWCDQITKDGIEAL--VRGCRGLKA--LLLRGCTQLEDEALKHIQNYCHELVSL 213
Score = 47.8 bits (112), Expect = 2e-05
Identities = 56/227 (24%), Positives = 97/227 (42%), Gaps = 33/227 (14%)
Query: 193 IEVSTLHGILSQCSKLQNLSLEGL-RLSDPIVNTLAKNSN-LVRLNLSGCSGFSEFALQT 250
+E L I + C +L +L+L+ R++D V + + + L L LSGCS ++ +L
Sbjct: 195 LEDEALKHIQNYCHELVSLNLQSCSRITDEGVVQICRGCHRLQALCLSGCSNLTDASLTA 254
Query: 251 LLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDL-------- 302
L +C RL L + C T+ + + E L+K DL
Sbjct: 255 LGLNCPRLQILEAARCSHLTDAGFTLLARNCHE-------------LEKMDLEECILITD 301
Query: 303 STLVR---RCPNLVHLDLSDSVMLKNDCFQEFFQL----NYLQHLSLSRCYDIIPETLLE 355
STL++ CP L L LS ++ +D L+ L L C I L
Sbjct: 302 STLIQLSIHCPKLQALSLSHCELITDDGILHLSNSTCGHERLRVLELDNCLLITDVALEH 361
Query: 356 LGEIPTLKTLQVFGI--VPDGTLQLLKEALPHLQINCSHFTTIARPT 400
L L+ L+++ V ++ ++ LPH++++ ++F + PT
Sbjct: 362 LENCRGLERLELYDCQQVTRAGIKRMRAQLPHVKVH-AYFAPVTPPT 407
>gi|6912466 F-box and leucine-rich repeat protein 7 [Homo sapiens]
Length = 491
Score = 75.1 bits (183), Expect = 1e-13
Identities = 72/274 (26%), Positives = 124/274 (45%), Gaps = 48/274 (17%)
Query: 96 SWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQTLDLTGKNLHPDVTGRL 155
S D LPD ++ IFS L +L + + VC+RWY LA D LW+T+ LTG+ ++ D ++
Sbjct: 113 SIDRLPDHSMVQIFSFLPTNQLCRCARVCRRWYNLAWDPRLWRTIRLTGETINVDRALKV 172
Query: 156 LSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEG 215
L++ R D P + C L+ +++ G
Sbjct: 173 LTR--------RLCQDTP-----------------------------NVCLMLETVTVSG 195
Query: 216 L-RLSDPIVNTLAK-NSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFT--- 270
RL+D + T+A+ L RL +SGC S A+ ++S C L+ L++S C T
Sbjct: 196 CRRLTDRGLYTIAQCCPELRRLEVSGCYNISNEAVFDVVSLCPNLEHLDVSGCSKVTCIS 255
Query: 271 ---EKHVQVAVAHVSE-TITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKND 326
E ++++ H + +I L+++ L+ L T+ C L HL L V L ++
Sbjct: 256 LTREASIKLSPLHGKQISIRYLDMTDCFV-LEDEGLHTIAAHCTQLTHLYLRRCVRLTDE 314
Query: 327 CFQEF-FQLNYLQHLSLSRCYDIIPETLLELGEI 359
+ ++ LS+S C + L E+ ++
Sbjct: 315 GLRYLVIYCASIKELSVSDCRFVSDFGLREIAKL 348
Score = 55.5 bits (132), Expect = 9e-08
Identities = 68/248 (27%), Positives = 117/248 (47%), Gaps = 18/248 (7%)
Query: 113 CLPEL--LKVSGVCKRWYRLASDESLWQTLDLTGKNLHPDVTGRLLSQGVIAFRCPRSFM 170
C PEL L+VSG Y + S+E+++ + L H DV+G I+ S
Sbjct: 210 CCPELRRLEVSGC----YNI-SNEAVFDVVSLCPNLEHLDVSG-CSKVTCISLTREASIK 263
Query: 171 DQPLAEHFSPFRVQHMDLSNS-VIEVSTLHGILSQCSKLQNLSLEG-LRLSDPIVNTLAK 228
PL H ++++D+++ V+E LH I + C++L +L L +RL+D + L
Sbjct: 264 LSPL--HGKQISIRYLDMTDCFVLEDEGLHTIAAHCTQLTHLYLRRCVRLTDEGLRYLVI 321
Query: 229 N-SNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQ 287
+++ L++S C S+F L+ + SRL L+++ C T+ ++ + S+ +
Sbjct: 322 YCASIKELSVSDCRFVSDFGLREIAKLESRLRYLSIAHCGRVTDVGIRYVAKYCSK-LRY 380
Query: 288 LNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLN--YLQHLSLSRC 345
LN G + + + L + C L LD+ L +D E LN L+ LSL C
Sbjct: 381 LNARGC-EGITDHGVEYLAKNCTKLKSLDIG-KCPLVSDTGLECLALNCFNLKRLSLKSC 438
Query: 346 YDIIPETL 353
I + L
Sbjct: 439 ESITGQGL 446
Score = 35.4 bits (80), Expect = 0.099
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 5/75 (6%)
Query: 197 TLHGI---LSQCSKLQNLSLEGLRL-SDPIVNTLAKNS-NLVRLNLSGCSGFSEFALQTL 251
T HG+ C+KL++L + L SD + LA N NL RL+L C + LQ +
Sbjct: 390 TDHGVEYLAKNCTKLKSLDIGKCPLVSDTGLECLALNCFNLKRLSLKSCESITGQGLQIV 449
Query: 252 LSSCSRLDELNLSWC 266
++C L LN+ C
Sbjct: 450 AANCFDLQTLNVQDC 464
>gi|54112382 F-box and leucine-rich repeat protein 10 isoform a [Homo
sapiens]
Length = 1336
Score = 58.2 bits (139), Expect = 1e-08
Identities = 67/287 (23%), Positives = 123/287 (42%), Gaps = 55/287 (19%)
Query: 103 ELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQTLDLTG-KNLHPDVTGRLLSQGVI 161
E+ + +FS L +L VC+ W R D+ LW +DL K++ P L+ G+I
Sbjct: 1068 EVWMAVFSYLSHQDLCVCMRVCRTWNRWCCDKRLWTRIDLNHCKSITP-----LMLSGII 1122
Query: 162 AFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGIL--------------SQCSK 207
QP++ S + LS + + L ++ S C
Sbjct: 1123 --------RRQPVSLDLSWTNISKKQLSWLINRLPGLRDLVLSGCSWIAVSALCSSSCPL 1174
Query: 208 LQNLS---LEGLR-------LSDPIVN------TLAKNSNLVRLNLSGCSGFSEFALQTL 251
L+ L +EGL+ LS P N +K N+V L L+G ++ +L+ +
Sbjct: 1175 LRTLDVQWVEGLKDAQMRDLLSPPTDNRPGQMDNRSKLRNIVELRLAGLD-ITDASLRLI 1233
Query: 252 LSSCSRLDELNLSWCFDFTEKHVQVAVA---HVSETITQLNLSGYRKNLQKSDLSTLVRR 308
+ L +L+LS+C T++ + + A +++T++NLS K + +R
Sbjct: 1234 IRHMPLLSKLHLSYCNHVTDQSINLLTAVGTTTRDSLTEINLSDCNK--VTDQCLSFFKR 1291
Query: 309 CPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLE 355
C N+ H+DL + + ++F + +S+S + + E LL+
Sbjct: 1292 CGNICHIDLRYCKQVTKEGCEQF-----IAEMSVSVQFGQVEEKLLQ 1333
>gi|54112380 F-box and leucine-rich repeat protein 10 isoform b [Homo
sapiens]
Length = 1265
Score = 57.4 bits (137), Expect = 2e-08
Identities = 67/276 (24%), Positives = 117/276 (42%), Gaps = 51/276 (18%)
Query: 103 ELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQTLDLTG-KNLHPDVTGRLLSQGVI 161
E+ + +FS L +L VC+ W R D+ LW +DL K++ P L+ G+I
Sbjct: 999 EVWMAVFSYLSHQDLCVCMRVCRTWNRWCCDKRLWTRIDLNHCKSITP-----LMLSGII 1053
Query: 162 AFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGIL--------------SQCSK 207
QP++ S + LS + + L ++ S C
Sbjct: 1054 --------RRQPVSLDLSWTNISKKQLSWLINRLPGLRDLVLSGCSWIAVSALCSSSCPL 1105
Query: 208 LQNLS---LEGLR-------LSDPIVN------TLAKNSNLVRLNLSGCSGFSEFALQTL 251
L+ L +EGL+ LS P N +K N+V L L+G ++ +L+ +
Sbjct: 1106 LRTLDVQWVEGLKDAQMRDLLSPPTDNRPGQMDNRSKLRNIVELRLAGLD-ITDASLRLI 1164
Query: 252 LSSCSRLDELNLSWCFDFTEKHVQVAVA---HVSETITQLNLSGYRKNLQKSDLSTLVRR 308
+ L +L+LS+C T++ + + A +++T++NLS K + +R
Sbjct: 1165 IRHMPLLSKLHLSYCNHVTDQSINLLTAVGTTTRDSLTEINLSDCNK--VTDQCLSFFKR 1222
Query: 309 CPNLVHLDLS-DSVMLKNDCFQEFFQLNYLQHLSLS 343
C N+ H+DL + K C Q +++ Q S S
Sbjct: 1223 CGNICHIDLRYCKQVTKEGCEQFIAEMSSFQGRSCS 1258
>gi|16306588 F-box and leucine-rich repeat protein 4 [Homo sapiens]
Length = 621
Score = 57.0 bits (136), Expect = 3e-08
Identities = 83/309 (26%), Positives = 129/309 (41%), Gaps = 70/309 (22%)
Query: 97 WDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQTLDLTGKNLHPDVTGRLL 156
+D LP EL+ I + L LP+L +++ CK LL
Sbjct: 280 FDKLPYELIQLILNHLTLPDLCRLAQTCK-----------------------------LL 310
Query: 157 SQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSN--SVIEVSTLHGILSQCSKLQ--NLS 212
SQ P + H++L + ++ ++L + S+C+ +Q NLS
Sbjct: 311 SQHCC-----------------DPLQYIHLNLQPYWAKLDDTSLEFLQSRCTLVQWLNLS 353
Query: 213 LEGLR--LSDPIVNTLAK--NSNLVRLNLSGCSGF-SEFALQTLLSSCSRLDELNLSWCF 267
G R +S + K S LVRL LS CS F +E L+ + C L LNLS C
Sbjct: 354 WTGNRGFISVAGFSRFLKVCGSELVRLELS-CSHFLNETCLEVISEMCPNLQALNLSSC- 411
Query: 268 DFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKN-D 326
+K A H+++ + L YR ++++ L +++ C L HL L VM+++ D
Sbjct: 412 ---DKLPPQAFNHIAKLCSLKRLVLYRTKVEQTALLSILNFCSELQHLSLGSCVMIEDYD 468
Query: 327 CFQEFF--QLNYLQHLSLSRCYDIIPETLLELGE-IPTLKTLQVFGIVP-----DGTLQL 378
+ L+ L L RC +I + EL P L+ L + G P G
Sbjct: 469 VIASMIGAKCKKLRTLDLWRCKNITENGIAELASGCPLLEELDL-GWCPTLQSSTGCFTR 527
Query: 379 LKEALPHLQ 387
L LP+LQ
Sbjct: 528 LAHQLPNLQ 536
Score = 53.9 bits (128), Expect = 3e-07
Identities = 50/180 (27%), Positives = 84/180 (46%), Gaps = 7/180 (3%)
Query: 183 VQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLS---DPIVNTL-AKNSNLVRLNLS 238
++ + L + +E + L IL+ CS+LQ+LSL + D I + + AK L L+L
Sbjct: 428 LKRLVLYRTKVEQTALLSILNFCSELQHLSLGSCVMIEDYDVIASMIGAKCKKLRTLDLW 487
Query: 239 GCSGFSEFALQTLLSSCSRLDELNLSWCFDF-TEKHVQVAVAHVSETITQLNLSGYRKNL 297
C +E + L S C L+EL+L WC + +AH + +L L+ R ++
Sbjct: 488 RCKNITENGIAELASGCPLLEELDLGWCPTLQSSTGCFTRLAHQLPNLQKLFLTANR-SV 546
Query: 298 QKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQ-LNYLQHLSLSRCYDIIPETLLEL 356
+D+ L C L LD+ + M+ ++ + L L +S C I +LEL
Sbjct: 547 CDTDIDELACNCTRLQQLDILGTRMVSPASLRKLLESCKDLSLLDVSFCSQIDNRAVLEL 606
>gi|161333854 F-box and leucine-rich repeat protein 13 isoform 2
[Homo sapiens]
Length = 690
Score = 55.1 bits (131), Expect = 1e-07
Identities = 94/401 (23%), Positives = 156/401 (38%), Gaps = 85/401 (21%)
Query: 77 KDFVIVRRPKLNRENFPGVSWDS--------------LPDELLLGIFSCLCLPELLKVSG 122
K+ +I++R NFP S LP+ +L IF L L +++
Sbjct: 121 KNRLILKRAAAEESNFPERSSSEVFLVDETLKCDISLLPERAILQIFFYLSLKDVIICGQ 180
Query: 123 VCKRWYRLASDESLWQTLDLTG-KNLHPDV------------TGRLLSQGVI----AFR- 164
V W + SLW +D + KN+ PD RL +G + FR
Sbjct: 181 VNHAWMLMTQLNSLWNAIDFSSVKNVIPDKYIVSTLQRWRLNVLRLNFRGCLLRPKTFRS 240
Query: 165 --------------CPRSFMDQPLAEHFSPF--RVQHMDLSNSVIEVSTLHGILSQCSKL 208
CP +F D+ + H S V ++LSN+ I T+ + L
Sbjct: 241 VSHCRNLQELNVSDCP-TFTDESM-RHISEGCPGVLCLNLSNTTITNRTMRLLPRHFHNL 298
Query: 209 QNLSLEGLR-LSDPIVNTLAKNSN---LVRLNLSGCSGFSEFALQTLLSSCSRLDELNLS 264
QNLSL R +D + L + L+ L+LSGC+ S + + +SC+ + L ++
Sbjct: 299 QNLSLAYCRRFTDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYIANSCTGIMHLTIN 358
Query: 265 WCFDFTEKHVQVAV--------------AHVSE-TITQLNLSGYRK-----NLQKSDLS- 303
T+ V+ V H+S+ T L+ RK N + +D S
Sbjct: 359 DMPTLTDNCVKALVEKCSRITSLVFTGAPHISDCTFRALSACKLRKIRFEGNKRVTDASF 418
Query: 304 -TLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTL 362
+ + PNL H+ ++D + + + L L L+L+ C I L + + P
Sbjct: 419 KFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIGDMGLKQFLDGPAS 478
Query: 363 KTLQVFGI-----VPDGTLQLLKEALPHLQI----NCSHFT 394
++ + + D ++ L E P+L NC H T
Sbjct: 479 MRIRELNLSNCVRLSDASVMKLSERCPNLNYLSLRNCEHLT 519
Score = 38.5 bits (88), Expect = 0.012
Identities = 35/131 (26%), Positives = 64/131 (48%), Gaps = 20/131 (15%)
Query: 164 RCPR-SFMDQPLAEHFSP---------FRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSL 213
RCP +++ EH + F + +DLS + I L+ +LS+ KL+ LS+
Sbjct: 503 RCPNLNYLSLRNCEHLTAQGIGYIVNIFSLVSIDLSGTDISNEGLN-VLSRHKKLKELSV 561
Query: 214 --------EGLRLSDPIVNTL-AKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLS 264
+G++++D + L AK L L++SGC ++ L+ L C +L L +
Sbjct: 562 SECYRITDDGIQITDSAMEMLSAKCHYLHILDISGCVLLTDQILEDLQIGCKQLRILKMQ 621
Query: 265 WCFDFTEKHVQ 275
+C + ++K Q
Sbjct: 622 YCTNISKKAAQ 632
Score = 31.6 bits (70), Expect = 1.4
Identities = 34/130 (26%), Positives = 57/130 (43%), Gaps = 13/130 (10%)
Query: 235 LNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYR 294
LNLS C S+ ++ L C L+ L+L C T + + V S + ++LSG
Sbjct: 484 LNLSNCVRLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIGYIVNIFS--LVSIDLSG-- 539
Query: 295 KNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQ------EFF--QLNYLQHLSLSRCY 346
++ L+ L R L L +S+ + +D Q E + +YL L +S C
Sbjct: 540 TDISNEGLNVLSRH-KKLKELSVSECYRITDDGIQITDSAMEMLSAKCHYLHILDISGCV 598
Query: 347 DIIPETLLEL 356
+ + L +L
Sbjct: 599 LLTDQILEDL 608
>gi|161333852 F-box and leucine-rich repeat protein 13 isoform 1
[Homo sapiens]
Length = 735
Score = 55.1 bits (131), Expect = 1e-07
Identities = 94/401 (23%), Positives = 156/401 (38%), Gaps = 85/401 (21%)
Query: 77 KDFVIVRRPKLNRENFPGVSWDS--------------LPDELLLGIFSCLCLPELLKVSG 122
K+ +I++R NFP S LP+ +L IF L L +++
Sbjct: 121 KNRLILKRAAAEESNFPERSSSEVFLVDETLKCDISLLPERAILQIFFYLSLKDVIICGQ 180
Query: 123 VCKRWYRLASDESLWQTLDLTG-KNLHPDV------------TGRLLSQGVI----AFR- 164
V W + SLW +D + KN+ PD RL +G + FR
Sbjct: 181 VNHAWMLMTQLNSLWNAIDFSSVKNVIPDKYIVSTLQRWRLNVLRLNFRGCLLRPKTFRS 240
Query: 165 --------------CPRSFMDQPLAEHFSPF--RVQHMDLSNSVIEVSTLHGILSQCSKL 208
CP +F D+ + H S V ++LSN+ I T+ + L
Sbjct: 241 VSHCRNLQELNVSDCP-TFTDESM-RHISEGCPGVLCLNLSNTTITNRTMRLLPRHFHNL 298
Query: 209 QNLSLEGLR-LSDPIVNTLAKNSN---LVRLNLSGCSGFSEFALQTLLSSCSRLDELNLS 264
QNLSL R +D + L + L+ L+LSGC+ S + + +SC+ + L ++
Sbjct: 299 QNLSLAYCRRFTDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYIANSCTGIMHLTIN 358
Query: 265 WCFDFTEKHVQVAV--------------AHVSE-TITQLNLSGYRK-----NLQKSDLS- 303
T+ V+ V H+S+ T L+ RK N + +D S
Sbjct: 359 DMPTLTDNCVKALVEKCSRITSLVFTGAPHISDCTFRALSACKLRKIRFEGNKRVTDASF 418
Query: 304 -TLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTL 362
+ + PNL H+ ++D + + + L L L+L+ C I L + + P
Sbjct: 419 KFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIGDMGLKQFLDGPAS 478
Query: 363 KTLQVFGI-----VPDGTLQLLKEALPHLQI----NCSHFT 394
++ + + D ++ L E P+L NC H T
Sbjct: 479 MRIRELNLSNCVRLSDASVMKLSERCPNLNYLSLRNCEHLT 519
Score = 48.9 bits (115), Expect = 9e-06
Identities = 36/150 (24%), Positives = 74/150 (49%), Gaps = 3/150 (2%)
Query: 200 GILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLD 259
G + L ++ L G +S+ +N L+++ L L++S C ++ +Q S L+
Sbjct: 524 GYIVNIFSLVSIDLSGTDISNEGLNVLSRHKKLKELSVSECYRITDDGIQAFCKSSLILE 583
Query: 260 ELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSD 319
L++S+C ++ ++ A+A +T L+++G K + S + L +C L LD+S
Sbjct: 584 HLDVSYCSQLSDMIIK-ALAIYCINLTSLSIAGCPK-ITDSAMEMLSAKCHYLHILDISG 641
Query: 320 SVMLKNDCFQEF-FQLNYLQHLSLSRCYDI 348
V+L + ++ L+ L + C +I
Sbjct: 642 CVLLTDQILEDLQIGCKQLRILKMQYCTNI 671
Score = 38.9 bits (89), Expect = 0.009
Identities = 40/158 (25%), Positives = 70/158 (44%), Gaps = 9/158 (5%)
Query: 235 LNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYR 294
LNLS C S+ ++ L C L+ L+L C T + + V S + ++LSG
Sbjct: 484 LNLSNCVRLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIGYIVNIFS--LVSIDLSG-- 539
Query: 295 KNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLN-YLQHLSLSRCYDIIPETL 353
++ L+ L R L L +S+ + +D Q F + + L+HL +S C + +
Sbjct: 540 TDISNEGLNVLSRH-KKLKELSVSECYRITDDGIQAFCKSSLILEHLDVSYCSQLSDMII 598
Query: 354 LELG-EIPTLKTLQVFGI--VPDGTLQLLKEALPHLQI 388
L L +L + G + D +++L +L I
Sbjct: 599 KALAIYCINLTSLSIAGCPKITDSAMEMLSAKCHYLHI 636
Score = 36.2 bits (82), Expect = 0.058
Identities = 26/96 (27%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Query: 183 VQHMDLSN-SVIEVSTLHGILSQCSKLQNLSLEGL-RLSDPIVNTL-AKNSNLVRLNLSG 239
++H+D+S S + + + C L +LS+ G +++D + L AK L L++SG
Sbjct: 582 LEHLDVSYCSQLSDMIIKALAIYCINLTSLSIAGCPKITDSAMEMLSAKCHYLHILDISG 641
Query: 240 CSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQ 275
C ++ L+ L C +L L + +C + ++K Q
Sbjct: 642 CVLLTDQILEDLQIGCKQLRILKMQYCTNISKKAAQ 677
>gi|16306580 F-box and leucine-rich repeat protein 11 [Homo sapiens]
Length = 1162
Score = 53.1 bits (126), Expect = 5e-07
Identities = 64/292 (21%), Positives = 117/292 (40%), Gaps = 55/292 (18%)
Query: 96 SWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQTLDLTG-KNLHPDVTGR 154
SW + E+ + +F L EL + VCK WY+ D+ LW +DL+ K + P
Sbjct: 891 SW--MQREVWMSVFRYLSRRELCECMRVCKTWYKWCCDKRLWTKIDLSRCKAIVPQALSG 948
Query: 155 LLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGIL------------ 202
++ + QP++ S + L+ V + L +L
Sbjct: 949 IIKR-------------QPVSLDLSWTNISKKQLTWLVNRLPGLKDLLLAGCSWSAVSAL 995
Query: 203 --SQCSKLQNLSLE-GLRLSDPIVNTL-------------AKNSNLVRLNLSGCSGFSEF 246
S C L+ L L + + DP + L +K N+ L+G ++
Sbjct: 996 STSSCPLLRTLDLRWAVGIKDPQIRDLLTPPADKPGQDNRSKLRNMTDFRLAGLD-ITDA 1054
Query: 247 ALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSET---ITQLNLSGYRKNLQKSDLS 303
L+ ++ L L+LS C T++ + A S T +T+LN++G K ++ +
Sbjct: 1055 TLRLIIRHMPLLSRLDLSHCSHLTDQSSNLLTAVGSSTRYSLTELNMAGCNKLTDQTLI- 1113
Query: 304 TLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLE 355
+RR N+ +DL + + F + LS++ Y + E L++
Sbjct: 1114 -YLRRIANVTLIDLRGCKQITRKACEHF-----ISDLSINSLYCLSDEKLIQ 1159
>gi|8923179 F-box and leucine-rich repeat protein 12 [Homo sapiens]
Length = 326
Score = 52.4 bits (124), Expect = 8e-07
Identities = 26/57 (45%), Positives = 35/57 (61%)
Query: 100 LPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQTLDLTGKNLHPDVTGRLL 156
LPD +LL IFS L + + +++S VC RW RL D LW+ +DLT + P V LL
Sbjct: 7 LPDSVLLEIFSYLPVRDRIRISRVCHRWKRLVDDRWLWRHVDLTLYTMRPKVMWHLL 63
>gi|16306576 F-box and leucine-rich repeat protein 6 isoform 1 [Homo
sapiens]
Length = 539
Score = 51.2 bits (121), Expect = 2e-06
Identities = 48/185 (25%), Positives = 77/185 (41%), Gaps = 36/185 (19%)
Query: 85 PKLNRENFPGVSW-DSLPDELLLGIFSCLC-----LPELLKVSGVCKRWYRLASDESLWQ 138
P E P W D +P E+L+ IF L +P L + + VC+RW AS +LW
Sbjct: 99 PTPTPEEGPDAGWGDRIPLEILVQIFGLLVAADGPMPFLGRAARVCRRWQEAASQPALWH 158
Query: 139 TLDLTGKNLHPDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTL 198
T+ L+ + GR GV A + + ++ + FS ++Q + L + +V +
Sbjct: 159 TVTLSS-----PLVGRPAKGGVKAEKKLLASLEWLMPNRFS--QLQRLTLIHWKSQVHPV 211
Query: 199 HGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRL 258
++ +C L L LSGC G + AL L +C +L
Sbjct: 212 LKLVGECC-----------------------PRLTFLKLSGCHGVTADALVMLAKACCQL 248
Query: 259 DELNL 263
L+L
Sbjct: 249 HSLDL 253
>gi|190194416 F-box and leucine-rich repeat protein 15 [Homo
sapiens]
Length = 300
Score = 49.7 bits (117), Expect = 5e-06
Identities = 50/177 (28%), Positives = 81/177 (45%), Gaps = 6/177 (3%)
Query: 196 STLHGILSQCSKLQNLSLEGLR--LSDP-IVNTLAKNSNLVRLNLSGCSGFSEFALQTLL 252
+ L +L LQ L+L LSD +V LA+N L + L GC S AL L
Sbjct: 77 AALARLLRDAEGLQELALAPCHEWLSDEDLVPVLARNPQLRSVALGGCGQLSRRALGALA 136
Query: 253 SSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNL 312
C RL L+L+ C D+ + +A + +L+L+ R+ ++ + RR L
Sbjct: 137 EGCPRLQRLSLAHC-DWVDGLALRGLADRCPALEELDLTACRQLKDEAIVYLAQRRGAGL 195
Query: 313 VHLDLSDSVMLKNDCFQEFFQ-LNYLQHLSLSRCYDIIPETLLELGE-IPTLKTLQV 367
L L+ + + + QE + L HL L+ C + + + L E P L++L+V
Sbjct: 196 RSLSLAVNANVGDAAVQELARNCPELHHLDLTGCLRVGSDGVRTLAEYCPVLRSLRV 252
>gi|148922963 F-box and leucine-rich repeat protein 21 [Homo
sapiens]
Length = 434
Score = 49.3 bits (116), Expect = 7e-06
Identities = 68/340 (20%), Positives = 133/340 (39%), Gaps = 47/340 (13%)
Query: 95 VSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLW--------QTLDLTGKN 146
+ W SLP ++L IF L L + S VC+RW + LW Q+ + K+
Sbjct: 40 LDWGSLPHHVVLQIFQYLPLLDRACASSVCRRWNEVFHISDLWRKFEFELNQSATSSFKS 99
Query: 147 LHPDVTGRLLSQ-----GVIAFRCPRSFMDQPLA---------------EHFSPFRVQHM 186
HPD+ +++ + ++F+ S A S + M
Sbjct: 100 THPDLIQQIIKKHFAHLQYVSFKVDSSAESAEAACDILSQLVNCSIQTLGLISTAKPSFM 159
Query: 187 DLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTL-AKNSNLVRL-NLSGCSGFS 244
++S S VS L + L ++ +E + DP + L A NS+ +RL +S C S
Sbjct: 160 NVSESHF-VSALTVVFINSKSLSSIKIEDTPVDDPSLKILVANNSDTLRLPKMSSCPHVS 218
Query: 245 EFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKN-------- 296
+ + C L EL L++ + T++ + + L + +N
Sbjct: 219 SDGILCVADRCQGLRELALNY-YILTDELFLALSSETHVNLEHLRIDVVSENPGQIKFHA 277
Query: 297 LQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLEL 356
++K L++ P + +V++ ++E F+ + + ++ Y + + L
Sbjct: 278 VKKHSWDALIKHSPRV-------NVVMHFFLYEEEFETFFKEETPVTHLYFGRSVSKVVL 330
Query: 357 GEIPTLKTLQVFGIVPDGTLQLLKEALPHLQINCSHFTTI 396
G + + +V LQ L L + +C++ T +
Sbjct: 331 GRVGLNCPRLIELVVCANDLQPLDNELICIAEHCTNLTAL 370
>gi|157168349 F-box and leucine-rich repeat protein 19 [Homo
sapiens]
Length = 694
Score = 47.8 bits (112), Expect = 2e-05
Identities = 95/378 (25%), Positives = 137/378 (36%), Gaps = 101/378 (26%)
Query: 6 LQEIPDLSSNVATSFTWGWDSSKTSELLSGMGVSALEKEEP-DSENIPQELLSNLGHPES 64
L+ +PD SS+ + S DS S G S E E P ++ N + + G E+
Sbjct: 317 LERVPDTSSSSSDS-----DSDSDSS-----GTSLSEDEAPGEARNGRRPARGSSGEKEN 366
Query: 65 PPRKRLKSKGSDKDFV------------------IVRRPKLNREN----FPGVSWDSLPD 102
+R GS + +VR P + E S LP
Sbjct: 367 RGGRRAVRPGSGGPLLSWPLGPAPPPRPPQLERHVVRPPPRSPEPDTLPLAAGSDHPLPR 426
Query: 103 ELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQTLDLTGKNLHPDVTGRLLSQGVIA 162
L +F L EL VC+ W R D+ LW +DL+ + +T +LS GV+
Sbjct: 427 AAWLRVFQHLGPRELCICMRVCRTWSRWCYDKRLWPRMDLSRRK---SLTPPMLS-GVVR 482
Query: 163 FRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEG------- 215
R PR+ +DLS + + L +L++ LQ L L G
Sbjct: 483 -RQPRA-----------------LDLSWTGVSKKQLMWLLNRLQGLQELVLSGCSWLSVS 524
Query: 216 ---------LRLSDPIVNTLAKNSNL------------------------VRLNLSGCSG 242
LRL D K+S L L L+G
Sbjct: 525 ALGSAPLPALRLLDLRWIEDVKDSQLRELLLPPPDTKPGQTESRGRLQGVAELRLAGLE- 583
Query: 243 FSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVS---ETITQLNLSGYRKNLQK 299
++ +L+ LL +L L+LS C + V + A S ET+ LNL+G +
Sbjct: 584 LTDASLRLLLRHAPQLSALDLSHCAHVGDPSVHLLTAPTSPLRETLVHLNLAGCHR--LT 641
Query: 300 SDLSTLVRRCPNLVHLDL 317
L RRCP L LDL
Sbjct: 642 DHCLPLFRRCPRLRRLDL 659
>gi|61742136 F-box and leucine-rich repeat protein 6 isoform 2 [Homo
sapiens]
Length = 533
Score = 46.6 bits (109), Expect = 4e-05
Identities = 49/185 (26%), Positives = 73/185 (39%), Gaps = 42/185 (22%)
Query: 85 PKLNRENFPGVSW-DSLPDELLLGIFSCLC-----LPELLKVSGVCKRWYRLASDESLWQ 138
P E P W D +P E+L+ IF L +P L + + VC+RW AS +LW
Sbjct: 99 PTPTPEEGPDAGWGDRIPLEILVQIFGLLVAADGPMPFLGRAARVCRRWQEAASQPALWH 158
Query: 139 TLDLTGKNLHPDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTL 198
T+ L+ + GR GV A + + ++ + F
Sbjct: 159 TVTLSS-----PLVGRPAKGGVKAEKKLLASLEWLMPNRF-------------------- 193
Query: 199 HGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRL 258
S+LQ L+L + +V L L LSGC G + AL L +C +L
Sbjct: 194 -------SQLQRLTL--IHWKSQLVGECC--PRLTFLKLSGCHGVTADALVMLAKACCQL 242
Query: 259 DELNL 263
L+L
Sbjct: 243 HSLDL 247
>gi|24025682 F-box and leucine-rich repeat protein 16 [Homo sapiens]
Length = 479
Score = 45.4 bits (106), Expect = 1e-04
Identities = 46/193 (23%), Positives = 84/193 (43%), Gaps = 14/193 (7%)
Query: 102 DELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQTLDLTGKNLHPDVTGRLLSQGVI 161
+++L G+F E ++ VCK W R+ W L LH +L G
Sbjct: 99 EKILNGLFWYFSACEKCVLAQVCKAWRRVLYQPKFWAGLTPV---LHAKELYNVLPGGEK 155
Query: 162 AFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVS-TLHGILSQCSKLQNLSLEGLRLSD 220
F + F + E F V +D+ + + + G+ + K ++ GL +
Sbjct: 156 EFVNLQGFAARGF-EGFCLVGVSDLDICEFIDNYALSKKGVKAMSLKRSTITDAGLEVM- 213
Query: 221 PIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAH 280
L + +VRL LSGC+ F+E L + LS +R+ L++S C + + + A++
Sbjct: 214 -----LEQMQGVVRLELSGCNDFTEAGLWSSLS--ARITSLSVSDCINVADDAI-AAISQ 265
Query: 281 VSETITQLNLSGY 293
+ + +L+L Y
Sbjct: 266 LLPNLAELSLQAY 278
Score = 37.7 bits (86), Expect = 0.020
Identities = 39/166 (23%), Positives = 77/166 (46%), Gaps = 6/166 (3%)
Query: 222 IVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHV 281
+VN + NL L+LSGCS ++ ++ + + +L L+LSWC T+ +A+ +V
Sbjct: 312 VVNVVHSLPNLTALSLSGCSKVTDDGVELVAENLRKLRSLDLSWCPRITD----MALEYV 367
Query: 282 SETITQLNLSGYRKNLQKSDLS-TLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHL 340
+ + +L + ++ +D + + +L L L +++ + L L+ L
Sbjct: 368 ACDLHRLEELVLDRCVRITDTGLSYLSTMSSLRSLYLRWCCQVQDFGLKHLLALGSLRLL 427
Query: 341 SLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDGTLQLLKEALPHL 386
S + C + L L ++ L+ L++ P T +L K HL
Sbjct: 428 SPAGCPLLTTTGLSGLVQLQELEELELTN-CPGATPELFKYFSQHL 472
>gi|22748931 F-box and leucine-rich repeat protein 14 [Homo sapiens]
Length = 418
Score = 45.1 bits (105), Expect = 1e-04
Identities = 63/277 (22%), Positives = 119/277 (42%), Gaps = 39/277 (14%)
Query: 103 ELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQTLD--LTGKNLHPDVTGRLLSQG- 159
ELL IF L + + + + VC W A +S+W+ ++ L + +P + L ++G
Sbjct: 11 ELLAMIFGYLDVRDKGRAAQVCTAWRDAAYHKSVWRGVEAKLHLRRANPSLFPSLQARGI 70
Query: 160 ----VIAFRCPRSFMDQPLAEHFSPFRVQHMDLSN--SVIEVSTLHGILSQCSKLQNLSL 213
+++ R S++ Q +A ++ ++LS ++ + H + + L+ L+L
Sbjct: 71 RRVQILSLRRSLSYVIQGMA------NIESLNLSGCYNLTDNGLGHAFVQEIGSLRALNL 124
Query: 214 EGLR-LSDPIVNTLAKN-SNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTE 271
+ ++D + +A+ L L L GCS + L + RL LNL C ++
Sbjct: 125 SLCKQITDSSLGRIAQYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSD 184
Query: 272 KHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEF 331
V + H L+G ++ + C L L L D L + +
Sbjct: 185 ----VGIGH---------LAGMTRSAAEG--------CLGLEQLTLQDCQKLTDLSLKHI 223
Query: 332 FQ-LNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQV 367
+ L L+ L+LS C I LL L + +L++L +
Sbjct: 224 SRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNL 260
Score = 43.1 bits (100), Expect = 5e-04
Identities = 46/184 (25%), Positives = 83/184 (45%), Gaps = 22/184 (11%)
Query: 202 LSQCSKLQNLSLE-------GLRL---------SDPIVNTLAKNSNLVRLNLSGCSGFSE 245
L C KL +LSL+ GLRL SD + L+ +L LNL C S+
Sbjct: 209 LQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISD 268
Query: 246 FALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQL-NLSGYRKNLQKSDLST 304
+ L RL L++S+C +K ++A++++ + L +LS ++ ++
Sbjct: 269 TGIMHLAMGSLRLSGLDVSFC----DKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINR 324
Query: 305 LVRRCPNLVHLDLSDSVMLKNDCFQEFFQ-LNYLQHLSLSRCYDIIPETLLELGEIPTLK 363
+VR+ L L++ V + + + + L+ L + L C I L + ++P LK
Sbjct: 325 MVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLTGIDLYGCTRITKRGLERITQLPCLK 384
Query: 364 TLQV 367
L +
Sbjct: 385 VLNL 388
>gi|51873034 F-box and leucine-rich repeat protein 9 [Homo sapiens]
Length = 223
Score = 44.7 bits (104), Expect = 2e-04
Identities = 48/163 (29%), Positives = 73/163 (44%), Gaps = 17/163 (10%)
Query: 198 LHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTL-LSSCS 256
+HG SQ + L L+ S P + A + G S + ALQ L L++CS
Sbjct: 28 MHGAPSQLASLSLAHCSSLK-SRPELEHQASGTKDACPEPQGPSLLTLRALQELDLTACS 86
Query: 257 RLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLD 316
+L + +L+ F + + QL+LS L + L + R CP+L HL
Sbjct: 87 KLTDASLAKVLQFLQ-------------LRQLSLS-LLPELTDNGLVAVARGCPSLEHLA 132
Query: 317 LSDSVMLKNDCF-QEFFQLNYLQHLSLSRCYDIIPETLLELGE 358
LS L + + Q LQHL+LS C +I +TL +G+
Sbjct: 133 LSHCSRLSDKGWAQAASSWPRLQHLNLSSCSQLIEQTLDAIGQ 175
Score = 31.6 bits (70), Expect = 1.4
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Query: 183 VQHMDLSNSVIEVSTLHGILSQ---CSKLQNLSLEGL-RLSDPIVNTLAKN-SNLVRLNL 237
+Q LS S++ T +G+++ C L++L+L RLSD A + L LNL
Sbjct: 100 LQLRQLSLSLLPELTDNGLVAVARGCPSLEHLALSHCSRLSDKGWAQAASSWPRLQHLNL 159
Query: 238 SGCSGFSEFALQTLLSSCSRLDELNLSWC 266
S CS E L + +C +L L+++ C
Sbjct: 160 SSCSQLIEQTLDAIGQACRQLRVLDVATC 188
>gi|16306591 F-box and leucine-rich repeat protein 9 [Homo sapiens]
Length = 223
Score = 44.7 bits (104), Expect = 2e-04
Identities = 48/163 (29%), Positives = 73/163 (44%), Gaps = 17/163 (10%)
Query: 198 LHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTL-LSSCS 256
+HG SQ + L L+ S P + A + G S + ALQ L L++CS
Sbjct: 28 MHGAPSQLASLSLAHCSSLK-SRPELEHQASGTKDACPEPQGPSLLTLRALQELDLTACS 86
Query: 257 RLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLD 316
+L + +L+ F + + QL+LS L + L + R CP+L HL
Sbjct: 87 KLTDASLAKVLQFLQ-------------LRQLSLS-LLPELTDNGLVAVARGCPSLEHLA 132
Query: 317 LSDSVMLKNDCF-QEFFQLNYLQHLSLSRCYDIIPETLLELGE 358
LS L + + Q LQHL+LS C +I +TL +G+
Sbjct: 133 LSHCSRLSDKGWAQAASSWPRLQHLNLSSCSQLIEQTLDAIGQ 175
Score = 31.6 bits (70), Expect = 1.4
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Query: 183 VQHMDLSNSVIEVSTLHGILSQ---CSKLQNLSLEGL-RLSDPIVNTLAKN-SNLVRLNL 237
+Q LS S++ T +G+++ C L++L+L RLSD A + L LNL
Sbjct: 100 LQLRQLSLSLLPELTDNGLVAVARGCPSLEHLALSHCSRLSDKGWAQAASSWPRLQHLNL 159
Query: 238 SGCSGFSEFALQTLLSSCSRLDELNLSWC 266
S CS E L + +C +L L+++ C
Sbjct: 160 SSCSQLIEQTLDAIGQACRQLRVLDVATC 188
>gi|30089926 F-box only protein 11 isoform 1 [Homo sapiens]
Length = 843
Score = 43.5 bits (101), Expect = 4e-04
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 5/58 (8%)
Query: 98 DSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQTL-----DLTGKNLHPD 150
+ LPDE++L IFS L +L + + VCKR+ LA+D LW+ L + T +HP+
Sbjct: 73 EKLPDEVVLKIFSYLLEQDLCRAACVCKRFSELANDPILWKRLYMEVFEYTRPMMHPE 130
>gi|30089924 F-box only protein 11 isoform 2 [Homo sapiens]
Length = 686
Score = 43.5 bits (101), Expect = 4e-04
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 5/58 (8%)
Query: 98 DSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQTL-----DLTGKNLHPD 150
+ LPDE++L IFS L +L + + VCKR+ LA+D LW+ L + T +HP+
Sbjct: 73 EKLPDEVVLKIFSYLLEQDLCRAACVCKRFSELANDPILWKRLYMEVFEYTRPMMHPE 130
>gi|30089922 F-box only protein 11 isoform 3 [Homo sapiens]
Length = 585
Score = 43.5 bits (101), Expect = 4e-04
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 5/58 (8%)
Query: 98 DSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQTL-----DLTGKNLHPD 150
+ LPDE++L IFS L +L + + VCKR+ LA+D LW+ L + T +HP+
Sbjct: 73 EKLPDEVVLKIFSYLLEQDLCRAACVCKRFSELANDPILWKRLYMEVFEYTRPMMHPE 130
>gi|164663798 antagonist of mitotic exit network 1 homolog [Homo
sapiens]
Length = 258
Score = 40.8 bits (94), Expect = 0.002
Identities = 35/143 (24%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 187 DLSNSVIEVSTLHGILSQCS-------KLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSG 239
++ + +I++ ++ G ++ + ++Q L L +SD + L+ L +LNL+
Sbjct: 35 NIKDRLIKIMSMQGQITDSNISEILHPEVQTLDLRSCDISDAALLHLSNCRKLKKLNLNA 94
Query: 240 CSG----FSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRK 295
G + ++ + SSCS L E +L C + T++ V VA+A + + ++L G
Sbjct: 95 SKGNRVSVTSEGIKAVASSCSYLHEASLKRCCNLTDEGV-VALALNCQLLKIIDLGGC-L 152
Query: 296 NLQKSDLSTLVRRCPNLVHLDLS 318
++ L L + CP L +D S
Sbjct: 153 SITDVSLHALGKNCPFLQCVDFS 175
>gi|229576894 F-box and WD repeat domain containing 12 isoform 2
[Homo sapiens]
Length = 394
Score = 39.3 bits (90), Expect = 0.007
Identities = 22/43 (51%), Positives = 27/43 (62%)
Query: 100 LPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQTLDL 142
LPD L IFS L L LL+VS V K W R+A + LW++L L
Sbjct: 5 LPDLALKRIFSFLDLFGLLQVSQVNKHWNRIADSDYLWRSLSL 47
>gi|229576873 F-box and WD repeat domain containing 12 isoform 1
[Homo sapiens]
Length = 464
Score = 39.3 bits (90), Expect = 0.007
Identities = 22/43 (51%), Positives = 27/43 (62%)
Query: 100 LPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQTLDL 142
LPD L IFS L L LL+VS V K W R+A + LW++L L
Sbjct: 5 LPDLALKRIFSFLDLFGLLQVSQVNKHWNRIADSDYLWRSLSL 47
>gi|219281831 F-box protein 15 isoform 2 [Homo sapiens]
Length = 510
Score = 37.0 bits (84), Expect = 0.034
Identities = 18/40 (45%), Positives = 24/40 (60%)
Query: 98 DSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLW 137
D +P E+LL IFS L LL V +R+Y LA+D +W
Sbjct: 75 DGMPSEILLKIFSYLDAVSLLCTGCVSRRFYHLANDNFIW 114
>gi|16306574 F-box and leucine-rich repeat protein 5 isoform 2 [Homo
sapiens]
Length = 565
Score = 37.0 bits (84), Expect = 0.034
Identities = 56/232 (24%), Positives = 87/232 (37%), Gaps = 37/232 (15%)
Query: 100 LPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQTL-------------DLTGKN 146
LP E++L IFS L EL + S V +W +L SLW+ L T +
Sbjct: 82 LPPEVMLSIFSYLNPQELCRCSQVSMKWSQLTKTGSLWKHLYPVHWARGDWYSGPATELD 141
Query: 147 LHPDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCS 206
PD + R + + + + + +S + +E LHG++
Sbjct: 142 TEPD--DEWVKNRKDESRAFHEWDEDADIDESEESAEESIAISIAQMEKRLLHGLIHNVL 199
Query: 207 KLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGF------------SEFALQTLLSS 254
S++ L L+ + A +S +VR L C S F + L
Sbjct: 200 PYVGTSVKTLVLA----YSSAVSSKMVRQILELCPNLEHLDLTQTDISDSAFDSWSWLGC 255
Query: 255 CSRLDELNLSWCFDFTEKHVQVAVAHVSETITQL--NLSGYRKNLQKSDLST 304
C L L+LS C EK VA+ +S + L + SG+ K ST
Sbjct: 256 CQSLRHLDLSGC----EKITDVALEKISRALGILTSHQSGFLKTSTSKITST 303
Score = 32.0 bits (71), Expect = 1.1
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 232 LVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVA 277
L LNLSGC + LQ L+S+C L++ +C + H A
Sbjct: 502 LEHLNLSGCLTITGAGLQDLVSACPSLNDEYFYYCDNINGPHADTA 547
Score = 31.2 bits (69), Expect = 1.9
Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 5/106 (4%)
Query: 280 HVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQL---NY 336
+V ++ L L+ Y + + ++ CPNL HLDL+ + + + F + L
Sbjct: 201 YVGTSVKTLVLA-YSSAVSSKMVRQILELCPNLEHLDLTQT-DISDSAFDSWSWLGCCQS 258
Query: 337 LQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDGTLQLLKEA 382
L+HL LS C I L ++ + T G + T ++ A
Sbjct: 259 LRHLDLSGCEKITDVALEKISRALGILTSHQSGFLKTSTSKITSTA 304
>gi|16306572 F-box and leucine-rich repeat protein 5 isoform 1 [Homo
sapiens]
Length = 691
Score = 37.0 bits (84), Expect = 0.034
Identities = 56/232 (24%), Positives = 87/232 (37%), Gaps = 37/232 (15%)
Query: 100 LPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQTL-------------DLTGKN 146
LP E++L IFS L EL + S V +W +L SLW+ L T +
Sbjct: 208 LPPEVMLSIFSYLNPQELCRCSQVSMKWSQLTKTGSLWKHLYPVHWARGDWYSGPATELD 267
Query: 147 LHPDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCS 206
PD + R + + + + + +S + +E LHG++
Sbjct: 268 TEPD--DEWVKNRKDESRAFHEWDEDADIDESEESAEESIAISIAQMEKRLLHGLIHNVL 325
Query: 207 KLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGF------------SEFALQTLLSS 254
S++ L L+ + A +S +VR L C S F + L
Sbjct: 326 PYVGTSVKTLVLA----YSSAVSSKMVRQILELCPNLEHLDLTQTDISDSAFDSWSWLGC 381
Query: 255 CSRLDELNLSWCFDFTEKHVQVAVAHVSETITQL--NLSGYRKNLQKSDLST 304
C L L+LS C EK VA+ +S + L + SG+ K ST
Sbjct: 382 CQSLRHLDLSGC----EKITDVALEKISRALGILTSHQSGFLKTSTSKITST 429
Score = 32.0 bits (71), Expect = 1.1
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 232 LVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVA 277
L LNLSGC + LQ L+S+C L++ +C + H A
Sbjct: 628 LEHLNLSGCLTITGAGLQDLVSACPSLNDEYFYYCDNINGPHADTA 673
Score = 31.2 bits (69), Expect = 1.9
Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 5/106 (4%)
Query: 280 HVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQL---NY 336
+V ++ L L+ Y + + ++ CPNL HLDL+ + + + F + L
Sbjct: 327 YVGTSVKTLVLA-YSSAVSSKMVRQILELCPNLEHLDLTQT-DISDSAFDSWSWLGCCQS 384
Query: 337 LQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDGTLQLLKEA 382
L+HL LS C I L ++ + T G + T ++ A
Sbjct: 385 LRHLDLSGCEKITDVALEKISRALGILTSHQSGFLKTSTSKITSTA 430
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.135 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,486,502
Number of Sequences: 37866
Number of extensions: 727386
Number of successful extensions: 2171
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 45
Number of HSP's that attempted gapping in prelim test: 1997
Number of HSP's gapped (non-prelim): 159
length of query: 424
length of database: 18,247,518
effective HSP length: 105
effective length of query: 319
effective length of database: 14,271,588
effective search space: 4552636572
effective search space used: 4552636572
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.