Search of human proteins with 157388945

Search of human proteins with 157388945

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|157388945 elongation of very long chain fatty acids-like 2
[Homo sapiens]
         (296 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|157388945 elongation of very long chain fatty acids-like 2 [H...   619   e-177
gi|11464975 elongation of very long chain fatty acids-like 5 [Ho...   368   e-102
gi|12232379 elongation of very long chain fatty acids-like 4 [Ho...   268   6e-72
gi|157388949 elongation of very long chain fatty acids-like 7 [H...   199   2e-51
gi|157388947 elongation of very long chain fatty acids-like 7 [H...   199   2e-51
gi|13489093 elongation of very long chain fatty acids-like 1 [Ho...   169   2e-42
gi|195539343 elongation of very long chain fatty acids-like 6 [H...    74   2e-13
gi|13129088 elongation of very long chain fatty acids-like 6 [Ho...    74   2e-13
gi|23097310 elongation of very long chain fatty acids like 3 [Ho...    73   3e-13
gi|34734071 gamma-aminobutyric acid (GABA) A receptor, delta pre...    36   0.035
gi|12548788 gamma-aminobutyric acid (GABA) A receptor, beta 3 is...    35   0.079
gi|4503867 gamma-aminobutyric acid (GABA) A receptor, beta 3 iso...    35   0.079
gi|4503865 gamma-aminobutyric acid (GABA) A receptor, beta 2 iso...    35   0.079
gi|12548785 gamma-aminobutyric acid (GABA) A receptor, beta 2 is...    35   0.079
gi|34452723 gamma-aminobutyric acid A receptor, alpha 4 precurso...    35   0.10 
gi|194097327 gamma-aminobutyric acid (GABA) A receptor, beta 1 p...    34   0.13 
gi|189083762 gamma-aminobutyric acid A receptor, gamma 2 isoform...    33   0.23 
gi|38788135 gamma-aminobutyric acid A receptor, gamma 2 isoform ...    33   0.23 
gi|38788155 gamma-aminobutyric acid A receptor, gamma 2 isoform ...    33   0.23 
gi|167000817 gamma-aminobutyric acid A receptor, alpha 2 [Homo s...    33   0.23 
gi|167000751 gamma-aminobutyric acid A receptor, alpha 2 precurs...    33   0.23 
gi|4557603 gamma-aminobutyric acid A receptor, alpha 3 precursor...    33   0.23 
gi|4503861 gamma-aminobutyric acid (GABA) A receptor, alpha 5 pr...    33   0.23 
gi|189083734 gamma-aminobutyric acid (GABA) A receptor, alpha 1 ...    33   0.23 
gi|189083732 gamma-aminobutyric acid (GABA) A receptor, alpha 1 ...    33   0.23 
gi|189083730 gamma-aminobutyric acid (GABA) A receptor, alpha 1 ...    33   0.23 
gi|189083728 gamma-aminobutyric acid (GABA) A receptor, alpha 1 ...    33   0.23 
gi|189083726 gamma-aminobutyric acid (GABA) A receptor, alpha 1 ...    33   0.23 
gi|189083724 gamma-aminobutyric acid (GABA) A receptor, alpha 1 ...    33   0.23 
gi|38327554 gamma-aminobutyric acid (GABA) A receptor, alpha 1 p...    33   0.23 

>gi|157388945 elongation of very long chain fatty acids-like 2 [Homo
           sapiens]
          Length = 296

 Score =  619 bits (1596), Expect = e-177
 Identities = 296/296 (100%), Positives = 296/296 (100%)

Query: 1   MEHLKAFDDEINAFLDNMFGPRDSRVRGWFMLDSYLPTFFLTVMYLLSIWLGNKYMKNRP 60
           MEHLKAFDDEINAFLDNMFGPRDSRVRGWFMLDSYLPTFFLTVMYLLSIWLGNKYMKNRP
Sbjct: 1   MEHLKAFDDEINAFLDNMFGPRDSRVRGWFMLDSYLPTFFLTVMYLLSIWLGNKYMKNRP 60

Query: 61  ALSLRGILTLYNLGITLLSAYMLAELILSTWEGGYNLQCQDLTSAGEADIRVAKVLWWYY 120
           ALSLRGILTLYNLGITLLSAYMLAELILSTWEGGYNLQCQDLTSAGEADIRVAKVLWWYY
Sbjct: 61  ALSLRGILTLYNLGITLLSAYMLAELILSTWEGGYNLQCQDLTSAGEADIRVAKVLWWYY 120

Query: 121 FSKSVEFLDTIFFVLRKKTSQITFLHVYHHASMFNIWWCVLNWIPCGQSFFGPTLNSFIH 180
           FSKSVEFLDTIFFVLRKKTSQITFLHVYHHASMFNIWWCVLNWIPCGQSFFGPTLNSFIH
Sbjct: 121 FSKSVEFLDTIFFVLRKKTSQITFLHVYHHASMFNIWWCVLNWIPCGQSFFGPTLNSFIH 180

Query: 181 ILMYSYYGLSVFPSMHKYLWWKKYLTQAQLVQFVLTITHTMSAVVKPCGFPFGCLIFQSS 240
           ILMYSYYGLSVFPSMHKYLWWKKYLTQAQLVQFVLTITHTMSAVVKPCGFPFGCLIFQSS
Sbjct: 181 ILMYSYYGLSVFPSMHKYLWWKKYLTQAQLVQFVLTITHTMSAVVKPCGFPFGCLIFQSS 240

Query: 241 YMLTLVILFLNFYVQTYRKKPMKKDMQEPPAGKEVKNGFSKAYFTAANGVMNKKAQ 296
           YMLTLVILFLNFYVQTYRKKPMKKDMQEPPAGKEVKNGFSKAYFTAANGVMNKKAQ
Sbjct: 241 YMLTLVILFLNFYVQTYRKKPMKKDMQEPPAGKEVKNGFSKAYFTAANGVMNKKAQ 296


>gi|11464975 elongation of very long chain fatty acids-like 5 [Homo
           sapiens]
          Length = 299

 Score =  368 bits (944), Expect = e-102
 Identities = 168/298 (56%), Positives = 210/298 (70%), Gaps = 7/298 (2%)

Query: 1   MEHLKAFDDEINAFLDNMFGPRDSRVRGWFMLDSYLPTFFLTVMYLLSIWLGNKYMKNRP 60
           MEH   FD  ++ +   + GPRD+RV+GWF+LD+Y+PTF  +V+YLL +WLG KYM+N+ 
Sbjct: 1   MEH---FDASLSTYFKALLGPRDTRVKGWFLLDNYIPTFICSVIYLLIVWLGPKYMRNKQ 57

Query: 61  ALSLRGILTLYNLGITLLSAYMLAELILSTWEGGYNLQCQDLTSAGEADIRVAKVLWWYY 120
             S RGIL +YNLG+TLLS YM  EL+   WEG YN  CQ   +AGE+D+++ +VLWWYY
Sbjct: 58  PFSCRGILVVYNLGLTLLSLYMFCELVTGVWEGKYNFFCQGTRTAGESDMKIIRVLWWYY 117

Query: 121 FSKSVEFLDTIFFVLRKKTSQITFLHVYHHASMFNIWWCVLNWIPCGQSFFGPTLNSFIH 180
           FSK +EF+DT FF+LRK   QIT LHVYHHASM NIWW V+NW+PCG S+FG TLNSFIH
Sbjct: 118 FSKLIEFMDTFFFILRKNNHQITVLHVYHHASMLNIWWFVMNWVPCGHSYFGATLNSFIH 177

Query: 181 ILMYSYYGLSVFPSMHKYLWWKKYLTQAQLVQFVLTITHTMSAVVKPCGFPFGCLIFQSS 240
           +LMYSYYGLS  PSM  YLWWKKY+TQ QL+QFVLTI  T   V+ PC FP G L FQ  
Sbjct: 178 VLMYSYYGLSSVPSMRPYLWWKKYITQGQLLQFVLTIIQTSCGVIWPCTFPLGWLYFQIG 237

Query: 241 YMLTLVILFLNFYVQTYRKK--PMKKD--MQEPPAGKEVKNGFSKAYFTAANGVMNKK 294
           YM++L+ LF NFY+QTY KK    +KD             NG + ++    N V  +K
Sbjct: 238 YMISLIALFTNFYIQTYNKKGASRRKDHLKDHQNGSMAAVNGHTNSFSPLENNVKPRK 295


>gi|12232379 elongation of very long chain fatty acids-like 4 [Homo
           sapiens]
          Length = 314

 Score =  268 bits (684), Expect = 6e-72
 Identities = 124/276 (44%), Positives = 179/276 (64%), Gaps = 14/276 (5%)

Query: 23  DSRVRGWFMLDSYLPTFFLTVMYLLSIWLGNKYMKNRPALSLRGILTLYNLGITLLSAYM 82
           D RV  W ++ S  PT  ++ +YLL +WLG K+MK+R    +R +L +YN G+ LL+ ++
Sbjct: 34  DKRVENWPLMQSPWPTLSISTLYLLFVWLGPKWMKDREPFQMRLVLIIYNFGMVLLNLFI 93

Query: 83  LAELILSTWEGGYNLQCQDLTSAGEA-DIRVAKVLWWYYFSKSVEFLDTIFFVLRKKTSQ 141
             EL + ++  GY+  CQ +  +    ++R+A  LWWY+ SK VE+LDT+FF+LRKK +Q
Sbjct: 94  FRELFMGSYNAGYSYICQSVDYSNNVHEVRIAAALWWYFVSKGVEYLDTVFFILRKKNNQ 153

Query: 142 ITFLHVYHHASMFNIWWCVLNWIPCGQSFFGPTLNSFIHILMYSYYGLSVF-PSMHKYLW 200
           ++FLHVYHH +MF +WW  + W+  GQ+FFG  LNSFIH++MYSYYGL+ F P + KYLW
Sbjct: 154 VSFLHVYHHCTMFTLWWIGIKWVAGGQAFFGAQLNSFIHVIMYSYYGLTAFGPWIQKYLW 213

Query: 201 WKKYLTQAQLVQFVLTITHTMSAVVKPCGFPFGCLIFQSSYMLTLVILFLNFYVQTYRKK 260
           WK+YLT  QL+QF +TI HT  ++   C FP        +Y ++ + LFLNFY++TY   
Sbjct: 214 WKRYLTMLQLIQFHVTIGHTALSLYTDCPFPKWMHWALIAYAISFIFLFLNFYIRTY--- 270

Query: 261 PMKKDMQEPPAGKEVKNGFSKAYFTAANGVMNKKAQ 296
              K+ ++P AGK   NG S      ANGV   + Q
Sbjct: 271 ---KEPKKPKAGKTAMNGIS------ANGVSKSEKQ 297


>gi|157388949 elongation of very long chain fatty acids-like 7 [Homo
           sapiens]
          Length = 281

 Score =  199 bits (507), Expect = 2e-51
 Identities = 115/273 (42%), Positives = 152/273 (55%), Gaps = 17/273 (6%)

Query: 16  DNMFGPRDSRVRGWFMLDSYLPTFFLTVMYLLSIW-LGNKYMKNRPALSLRGILTLYNLG 74
           DN     D RV  W ++ S LP   L   Y+  +  LG K M+NR    L+  +  YN  
Sbjct: 15  DNWIKDADPRVEDWLLMSSPLPQTILLGFYVYFVTSLGPKLMENRKPFELKKAMITYNFF 74

Query: 75  ITLLSAYMLAELILSTWEGGYNLQCQDLT-SAGEADIRVAKVLWWYYFSKSVEFLDTIFF 133
           I L S YM  E ++S W  GY+ +C  +  S     +R+A+  W YYFSK +E LDTIFF
Sbjct: 75  IVLFSVYMCYEFVMSGWGIGYSFRCDIVDYSRSPTALRMARTCWLYYFSKFIELLDTIFF 134

Query: 134 VLRKKTSQITFLHVYHHASMFNIWWCVLNWIPCGQSFFGPTLNSFIHILMYSYYGLSVF- 192
           VLRKK SQ+TFLHV+HH  M   WW  + +   G   F   LN+ +H++MYSYYGLS   
Sbjct: 135 VLRKKNSQVTFLHVFHHTIMPWTWWFGVKFAAGGLGTFHALLNTAVHVVMYSYYGLSALG 194

Query: 193 PSMHKYLWWKKYLTQAQLVQFVLTITH-TMSAVVKPCGFP---FGCLIFQSSYMLTLVIL 248
           P+  KYLWWKKYLT  QLVQFV+   H +    ++ C +    F C+I   S+M   ++L
Sbjct: 195 PAYQKYLWWKKYLTSLQLVQFVIVAIHISQFFFMEDCKYQFPVFACIIMSYSFM--FLLL 252

Query: 249 FLNFYVQTYRKKPMKKDMQEPPAGKEVKNGFSK 281
           FL+F+ + Y K       Q  P  K VKNG  K
Sbjct: 253 FLHFWYRAYTKG------QRLP--KTVKNGTCK 277


>gi|157388947 elongation of very long chain fatty acids-like 7 [Homo
           sapiens]
          Length = 281

 Score =  199 bits (507), Expect = 2e-51
 Identities = 115/273 (42%), Positives = 152/273 (55%), Gaps = 17/273 (6%)

Query: 16  DNMFGPRDSRVRGWFMLDSYLPTFFLTVMYLLSIW-LGNKYMKNRPALSLRGILTLYNLG 74
           DN     D RV  W ++ S LP   L   Y+  +  LG K M+NR    L+  +  YN  
Sbjct: 15  DNWIKDADPRVEDWLLMSSPLPQTILLGFYVYFVTSLGPKLMENRKPFELKKAMITYNFF 74

Query: 75  ITLLSAYMLAELILSTWEGGYNLQCQDLT-SAGEADIRVAKVLWWYYFSKSVEFLDTIFF 133
           I L S YM  E ++S W  GY+ +C  +  S     +R+A+  W YYFSK +E LDTIFF
Sbjct: 75  IVLFSVYMCYEFVMSGWGIGYSFRCDIVDYSRSPTALRMARTCWLYYFSKFIELLDTIFF 134

Query: 134 VLRKKTSQITFLHVYHHASMFNIWWCVLNWIPCGQSFFGPTLNSFIHILMYSYYGLSVF- 192
           VLRKK SQ+TFLHV+HH  M   WW  + +   G   F   LN+ +H++MYSYYGLS   
Sbjct: 135 VLRKKNSQVTFLHVFHHTIMPWTWWFGVKFAAGGLGTFHALLNTAVHVVMYSYYGLSALG 194

Query: 193 PSMHKYLWWKKYLTQAQLVQFVLTITH-TMSAVVKPCGFP---FGCLIFQSSYMLTLVIL 248
           P+  KYLWWKKYLT  QLVQFV+   H +    ++ C +    F C+I   S+M   ++L
Sbjct: 195 PAYQKYLWWKKYLTSLQLVQFVIVAIHISQFFFMEDCKYQFPVFACIIMSYSFM--FLLL 252

Query: 249 FLNFYVQTYRKKPMKKDMQEPPAGKEVKNGFSK 281
           FL+F+ + Y K       Q  P  K VKNG  K
Sbjct: 253 FLHFWYRAYTKG------QRLP--KTVKNGTCK 277


>gi|13489093 elongation of very long chain fatty acids-like 1 [Homo
           sapiens]
          Length = 279

 Score =  169 bits (429), Expect = 2e-42
 Identities = 93/254 (36%), Positives = 146/254 (57%), Gaps = 10/254 (3%)

Query: 23  DSRVRGWFMLDSYL--PTFFLTVMYLLSIWLGNKYMKNRPALSLRGILTLYNLGITLLSA 80
           D R++G+ ++ S L   +  LT +Y + + LG + M NR    LRG + +YN  +  LS 
Sbjct: 16  DPRIQGYPLMGSPLLMTSILLTYVYFV-LSLGPRIMANRKPFQLRGFMIVYNFSLVALSL 74

Query: 81  YMLAELILSTWEGGYNLQCQ--DLTSAGEADIRVAKVLWWYYFSKSVEFLDTIFFVLRKK 138
           Y++ E ++S W   Y  +C   D +++ EA +R+ +V W + FSK +E +DT+ F+LRKK
Sbjct: 75  YIVYEFLMSGWLSTYTWRCDPVDYSNSPEA-LRMVRVAWLFLFSKFIELMDTVIFILRKK 133

Query: 139 TSQITFLHVYHHASMFNIWWCVLNWIPCGQSFFGPTLNSFIHILMYSYYGLSVF-PSMHK 197
             Q+TFLHV+HH+ +   WW  +   P G   F   +NS +H++MY YYGLS F P    
Sbjct: 134 DGQVTFLHVFHHSVLPWSWWWGVKIAPGGMGSFHAMINSSVHVIMYLYYGLSAFGPVAQP 193

Query: 198 YLWWKKYLTQAQLVQFVLTITH-TMSAVVKPCGFPFGCLIFQS-SYMLTLVILFLNFYVQ 255
           YLWWKK++T  QL+QFVL   H +    +  C + +  +I     Y     +LF NF+  
Sbjct: 194 YLWWKKHMTAIQLIQFVLVSLHISQYYFMSSCNYQYPVIIHLIWMYGTIFFMLFSNFWYH 253

Query: 256 TYRK-KPMKKDMQE 268
           +Y K K + + +Q+
Sbjct: 254 SYTKGKRLPRALQQ 267


>gi|195539343 elongation of very long chain fatty acids-like 6 [Homo
           sapiens]
          Length = 265

 Score = 73.6 bits (179), Expect = 2e-13
 Identities = 68/255 (26%), Positives = 118/255 (46%), Gaps = 30/255 (11%)

Query: 30  FMLDSYLPTFFLTVMYLLSIWLGNKYMKNRPALSLRGILTLYNLGITLLS--------AY 81
           +M +++  +F  + +Y   I+ G   M  R    LR  L L++L + + S        AY
Sbjct: 25  WMQENWKKSFLFSALYAAFIFGGRHLMNKRAKFELRKPLVLWSLTLAVFSIFGALRTGAY 84

Query: 82  MLAELILSTWEGGYNLQCQDLTSAGEADIRVAKVLWWYYF--SKSVEFLDTIFFVLRKKT 139
           M+  L+    +       Q +   G  +  V+K  W Y F  SK+ E  DTIF +LRK+ 
Sbjct: 85  MVYILMTKGLK-------QSVCDQGFYNGPVSK-FWAYAFVLSKAPELGDTIFIILRKQ- 135

Query: 140 SQITFLHVYHHASMFNIWWCVLNWIPCGQSFFGPTLNSFIHILMYSYYGLSV--FPSMHK 197
            ++ FLH YHH ++    W     +  G  +F  T+N  +H +MYSYY L    F    K
Sbjct: 136 -KLIFLHWYHHITVLLYSWYSYKDMVAGGGWF-MTMNYGVHAVMYSYYALRAAGFRVSRK 193

Query: 198 YLWWKKYLTQAQLVQFVL--TITHTMSAVVK--PCGFPFGCLIFQSSYMLTLVILFLNFY 253
           +     ++T +Q+ Q ++   + + +   ++   C   F  + + S   L+ ++LF +F+
Sbjct: 194 F---AMFITLSQITQMLMGCVVNYLVFCWMQHDQCHSHFQNIFWSSLMYLSYLVLFCHFF 250

Query: 254 VQTYRKKPMKKDMQE 268
            + Y  K  K    E
Sbjct: 251 FEAYIGKMRKTTKAE 265


>gi|13129088 elongation of very long chain fatty acids-like 6 [Homo
           sapiens]
          Length = 265

 Score = 73.6 bits (179), Expect = 2e-13
 Identities = 68/255 (26%), Positives = 118/255 (46%), Gaps = 30/255 (11%)

Query: 30  FMLDSYLPTFFLTVMYLLSIWLGNKYMKNRPALSLRGILTLYNLGITLLS--------AY 81
           +M +++  +F  + +Y   I+ G   M  R    LR  L L++L + + S        AY
Sbjct: 25  WMQENWKKSFLFSALYAAFIFGGRHLMNKRAKFELRKPLVLWSLTLAVFSIFGALRTGAY 84

Query: 82  MLAELILSTWEGGYNLQCQDLTSAGEADIRVAKVLWWYYF--SKSVEFLDTIFFVLRKKT 139
           M+  L+    +       Q +   G  +  V+K  W Y F  SK+ E  DTIF +LRK+ 
Sbjct: 85  MVYILMTKGLK-------QSVCDQGFYNGPVSK-FWAYAFVLSKAPELGDTIFIILRKQ- 135

Query: 140 SQITFLHVYHHASMFNIWWCVLNWIPCGQSFFGPTLNSFIHILMYSYYGLSV--FPSMHK 197
            ++ FLH YHH ++    W     +  G  +F  T+N  +H +MYSYY L    F    K
Sbjct: 136 -KLIFLHWYHHITVLLYSWYSYKDMVAGGGWF-MTMNYGVHAVMYSYYALRAAGFRVSRK 193

Query: 198 YLWWKKYLTQAQLVQFVL--TITHTMSAVVK--PCGFPFGCLIFQSSYMLTLVILFLNFY 253
           +     ++T +Q+ Q ++   + + +   ++   C   F  + + S   L+ ++LF +F+
Sbjct: 194 F---AMFITLSQITQMLMGCVVNYLVFCWMQHDQCHSHFQNIFWSSLMYLSYLVLFCHFF 250

Query: 254 VQTYRKKPMKKDMQE 268
            + Y  K  K    E
Sbjct: 251 FEAYIGKMRKTTKAE 265


>gi|23097310 elongation of very long chain fatty acids like 3 [Homo
           sapiens]
          Length = 270

 Score = 73.2 bits (178), Expect = 3e-13
 Identities = 66/247 (26%), Positives = 114/247 (46%), Gaps = 24/247 (9%)

Query: 30  FMLDSYLPTFFLTVMYLLSIWLGNKYMKNRPALSLRGILTLYNLGITLLSAYMLAEL--I 87
           F  + +  +F + ++YL+ I +G  YMK R   +L+G L L++  + + S      +  I
Sbjct: 29  FFEEYWATSFPIALIYLVLIAVGQNYMKERKGFNLQGPLILWSFCLAIFSILGAVRMWGI 88

Query: 88  LST--WEGGYNLQCQDLTSAGEADIRVAKVLWWYYFSKSVEFLDTIFFVLRKKTSQITFL 145
           + T    GG       +     + ++     W +  SK +E  DT F +LRK+   + F+
Sbjct: 89  MGTVLLTGGLKQTVCFINFIDNSTVKFWS--WVFLLSKVIELGDTAFIILRKR--PLIFI 144

Query: 146 HVYHHAS-MFNIWWCVLNWIPCGQSFFGPTLNSFIHILMYSYYGLSVF----PSMHKYLW 200
           H YHH++ +    +   N +P G  F   T+N  +H +MY+YY L       P M   L 
Sbjct: 145 HWYHHSTVLVYTSFGYKNKVPAGGWFV--TMNFGVHAIMYTYYTLKAANVKPPKMLPML- 201

Query: 201 WKKYLTQAQLVQ-FVLTITHTMSAVVKP---CGFPFGCLIFQSSYMLTLVILFLNFYVQT 256
               +T  Q++Q FV  I   ++ + +    C      L +     +T  ILF +F+ QT
Sbjct: 202 ----ITSLQILQMFVGAIVSILTYIWRQDQGCHTTMEHLFWSFILYMTYFILFAHFFCQT 257

Query: 257 YRKKPMK 263
           Y +  +K
Sbjct: 258 YIRPKVK 264


>gi|34734071 gamma-aminobutyric acid (GABA) A receptor, delta
           precursor [Homo sapiens]
          Length = 452

 Score = 36.2 bits (82), Expect = 0.035
 Identities = 18/63 (28%), Positives = 33/63 (52%)

Query: 25  RVRGWFMLDSYLPTFFLTVMYLLSIWLGNKYMKNRPALSLRGILTLYNLGITLLSAYMLA 84
           R RG +++ SY+P+  L  M  +S W+    +  R +L +  +LT+  L ++  S+   A
Sbjct: 245 RNRGVYIIQSYMPSVLLVAMSWVSFWISQAAVPARVSLGITTVLTMTTLMVSARSSLPRA 304

Query: 85  ELI 87
             I
Sbjct: 305 SAI 307


>gi|12548788 gamma-aminobutyric acid (GABA) A receptor, beta 3
           isoform 2 precursor [Homo sapiens]
          Length = 473

 Score = 35.0 bits (79), Expect = 0.079
 Identities = 14/50 (28%), Positives = 28/50 (56%)

Query: 28  GWFMLDSYLPTFFLTVMYLLSIWLGNKYMKNRPALSLRGILTLYNLGITL 77
           G+F+L +Y+P+  +T++  +S W+       R AL +  +LT+  +   L
Sbjct: 244 GYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHL 293


>gi|4503867 gamma-aminobutyric acid (GABA) A receptor, beta 3
           isoform 1 precursor [Homo sapiens]
          Length = 473

 Score = 35.0 bits (79), Expect = 0.079
 Identities = 14/50 (28%), Positives = 28/50 (56%)

Query: 28  GWFMLDSYLPTFFLTVMYLLSIWLGNKYMKNRPALSLRGILTLYNLGITL 77
           G+F+L +Y+P+  +T++  +S W+       R AL +  +LT+  +   L
Sbjct: 244 GYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHL 293


>gi|4503865 gamma-aminobutyric acid (GABA) A receptor, beta 2
           isoform 2 [Homo sapiens]
          Length = 474

 Score = 35.0 bits (79), Expect = 0.079
 Identities = 14/50 (28%), Positives = 28/50 (56%)

Query: 28  GWFMLDSYLPTFFLTVMYLLSIWLGNKYMKNRPALSLRGILTLYNLGITL 77
           G+F+L +Y+P+  +T++  +S W+       R AL +  +LT+  +   L
Sbjct: 243 GYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHL 292


>gi|12548785 gamma-aminobutyric acid (GABA) A receptor, beta 2
           isoform 1 [Homo sapiens]
          Length = 512

 Score = 35.0 bits (79), Expect = 0.079
 Identities = 14/50 (28%), Positives = 28/50 (56%)

Query: 28  GWFMLDSYLPTFFLTVMYLLSIWLGNKYMKNRPALSLRGILTLYNLGITL 77
           G+F+L +Y+P+  +T++  +S W+       R AL +  +LT+  +   L
Sbjct: 243 GYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHL 292


>gi|34452723 gamma-aminobutyric acid A receptor, alpha 4 precursor
           [Homo sapiens]
          Length = 554

 Score = 34.7 bits (78), Expect = 0.10
 Identities = 13/52 (25%), Positives = 27/52 (51%)

Query: 25  RVRGWFMLDSYLPTFFLTVMYLLSIWLGNKYMKNRPALSLRGILTLYNLGIT 76
           R  G+FM+ +Y+P     ++  +S W+  + +  R    +  +LT+  L I+
Sbjct: 254 RKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTTLSIS 305


>gi|194097327 gamma-aminobutyric acid (GABA) A receptor, beta 1
           precursor [Homo sapiens]
          Length = 474

 Score = 34.3 bits (77), Expect = 0.13
 Identities = 14/50 (28%), Positives = 28/50 (56%)

Query: 28  GWFMLDSYLPTFFLTVMYLLSIWLGNKYMKNRPALSLRGILTLYNLGITL 77
           G+F+L +Y+P+  +T++  +S W+       R AL +  +LT+  +   L
Sbjct: 244 GYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMTTISTHL 293


>gi|189083762 gamma-aminobutyric acid A receptor, gamma 2 isoform 3
           precursor [Homo sapiens]
          Length = 515

 Score = 33.5 bits (75), Expect = 0.23
 Identities = 14/50 (28%), Positives = 27/50 (54%)

Query: 24  SRVRGWFMLDSYLPTFFLTVMYLLSIWLGNKYMKNRPALSLRGILTLYNL 73
           SR  G+F + +Y+P   + V+  +S W+    +  R +L +  +LT+  L
Sbjct: 309 SRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMTTL 358


>gi|38788135 gamma-aminobutyric acid A receptor, gamma 2 isoform 2
           precursor [Homo sapiens]
          Length = 467

 Score = 33.5 bits (75), Expect = 0.23
 Identities = 14/50 (28%), Positives = 27/50 (54%)

Query: 24  SRVRGWFMLDSYLPTFFLTVMYLLSIWLGNKYMKNRPALSLRGILTLYNL 73
           SR  G+F + +Y+P   + V+  +S W+    +  R +L +  +LT+  L
Sbjct: 269 SRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMTTL 318


>gi|38788155 gamma-aminobutyric acid A receptor, gamma 2 isoform 1
           precursor [Homo sapiens]
          Length = 475

 Score = 33.5 bits (75), Expect = 0.23
 Identities = 14/50 (28%), Positives = 27/50 (54%)

Query: 24  SRVRGWFMLDSYLPTFFLTVMYLLSIWLGNKYMKNRPALSLRGILTLYNL 73
           SR  G+F + +Y+P   + V+  +S W+    +  R +L +  +LT+  L
Sbjct: 269 SRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMTTL 318


>gi|167000817 gamma-aminobutyric acid A receptor, alpha 2 [Homo
           sapiens]
          Length = 451

 Score = 33.5 bits (75), Expect = 0.23
 Identities = 13/49 (26%), Positives = 26/49 (53%)

Query: 28  GWFMLDSYLPTFFLTVMYLLSIWLGNKYMKNRPALSLRGILTLYNLGIT 76
           G+F++ +YLP     ++  +S WL  + +  R    +  +LT+  L I+
Sbjct: 251 GYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSIS 299


>gi|167000751 gamma-aminobutyric acid A receptor, alpha 2 precursor
           [Homo sapiens]
          Length = 451

 Score = 33.5 bits (75), Expect = 0.23
 Identities = 13/49 (26%), Positives = 26/49 (53%)

Query: 28  GWFMLDSYLPTFFLTVMYLLSIWLGNKYMKNRPALSLRGILTLYNLGIT 76
           G+F++ +YLP     ++  +S WL  + +  R    +  +LT+  L I+
Sbjct: 251 GYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSIS 299


>gi|4557603 gamma-aminobutyric acid A receptor, alpha 3 precursor
           [Homo sapiens]
          Length = 492

 Score = 33.5 bits (75), Expect = 0.23
 Identities = 13/49 (26%), Positives = 26/49 (53%)

Query: 28  GWFMLDSYLPTFFLTVMYLLSIWLGNKYMKNRPALSLRGILTLYNLGIT 76
           G+F++ +YLP     ++  +S WL  + +  R    +  +LT+  L I+
Sbjct: 276 GYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSIS 324


>gi|4503861 gamma-aminobutyric acid (GABA) A receptor, alpha 5
           precursor [Homo sapiens]
          Length = 462

 Score = 33.5 bits (75), Expect = 0.23
 Identities = 13/49 (26%), Positives = 26/49 (53%)

Query: 28  GWFMLDSYLPTFFLTVMYLLSIWLGNKYMKNRPALSLRGILTLYNLGIT 76
           G+F++ +YLP     ++  +S WL  + +  R    +  +LT+  L I+
Sbjct: 258 GYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSIS 306


>gi|189083734 gamma-aminobutyric acid (GABA) A receptor, alpha 1
           precursor [Homo sapiens]
          Length = 456

 Score = 33.5 bits (75), Expect = 0.23
 Identities = 13/49 (26%), Positives = 26/49 (53%)

Query: 28  GWFMLDSYLPTFFLTVMYLLSIWLGNKYMKNRPALSLRGILTLYNLGIT 76
           G+F++ +YLP     ++  +S WL  + +  R    +  +LT+  L I+
Sbjct: 251 GYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSIS 299


>gi|189083732 gamma-aminobutyric acid (GABA) A receptor, alpha 1
           precursor [Homo sapiens]
          Length = 456

 Score = 33.5 bits (75), Expect = 0.23
 Identities = 13/49 (26%), Positives = 26/49 (53%)

Query: 28  GWFMLDSYLPTFFLTVMYLLSIWLGNKYMKNRPALSLRGILTLYNLGIT 76
           G+F++ +YLP     ++  +S WL  + +  R    +  +LT+  L I+
Sbjct: 251 GYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSIS 299


>gi|189083730 gamma-aminobutyric acid (GABA) A receptor, alpha 1
           precursor [Homo sapiens]
          Length = 456

 Score = 33.5 bits (75), Expect = 0.23
 Identities = 13/49 (26%), Positives = 26/49 (53%)

Query: 28  GWFMLDSYLPTFFLTVMYLLSIWLGNKYMKNRPALSLRGILTLYNLGIT 76
           G+F++ +YLP     ++  +S WL  + +  R    +  +LT+  L I+
Sbjct: 251 GYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSIS 299


>gi|189083728 gamma-aminobutyric acid (GABA) A receptor, alpha 1
           precursor [Homo sapiens]
          Length = 456

 Score = 33.5 bits (75), Expect = 0.23
 Identities = 13/49 (26%), Positives = 26/49 (53%)

Query: 28  GWFMLDSYLPTFFLTVMYLLSIWLGNKYMKNRPALSLRGILTLYNLGIT 76
           G+F++ +YLP     ++  +S WL  + +  R    +  +LT+  L I+
Sbjct: 251 GYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSIS 299


>gi|189083726 gamma-aminobutyric acid (GABA) A receptor, alpha 1
           precursor [Homo sapiens]
          Length = 456

 Score = 33.5 bits (75), Expect = 0.23
 Identities = 13/49 (26%), Positives = 26/49 (53%)

Query: 28  GWFMLDSYLPTFFLTVMYLLSIWLGNKYMKNRPALSLRGILTLYNLGIT 76
           G+F++ +YLP     ++  +S WL  + +  R    +  +LT+  L I+
Sbjct: 251 GYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSIS 299


>gi|189083724 gamma-aminobutyric acid (GABA) A receptor, alpha 1
           precursor [Homo sapiens]
          Length = 456

 Score = 33.5 bits (75), Expect = 0.23
 Identities = 13/49 (26%), Positives = 26/49 (53%)

Query: 28  GWFMLDSYLPTFFLTVMYLLSIWLGNKYMKNRPALSLRGILTLYNLGIT 76
           G+F++ +YLP     ++  +S WL  + +  R    +  +LT+  L I+
Sbjct: 251 GYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSIS 299


>gi|38327554 gamma-aminobutyric acid (GABA) A receptor, alpha 1
           precursor [Homo sapiens]
          Length = 456

 Score = 33.5 bits (75), Expect = 0.23
 Identities = 13/49 (26%), Positives = 26/49 (53%)

Query: 28  GWFMLDSYLPTFFLTVMYLLSIWLGNKYMKNRPALSLRGILTLYNLGIT 76
           G+F++ +YLP     ++  +S WL  + +  R    +  +LT+  L I+
Sbjct: 251 GYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSIS 299


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.328    0.140    0.457 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,487,600
Number of Sequences: 37866
Number of extensions: 412341
Number of successful extensions: 1208
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1139
Number of HSP's gapped (non-prelim): 57
length of query: 296
length of database: 18,247,518
effective HSP length: 102
effective length of query: 194
effective length of database: 14,385,186
effective search space: 2790726084
effective search space used: 2790726084
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.