Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ELOVL1 Sequence: fasta or formatted (279aa) NCBI GI: 13489093
Description:

elongation of very long chain fatty acids-like 1

Referenced in:

Fatty Acid Synthesis

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         15           1
 C cysteine            0.7          2           1
 D aspartate           1.8          5           1
 E glutamate           1.8          5           1
 F phenylalanine       6.8         19           2
 G glycine             5.7         16           2
 H histidine           3.6         10           2
 I isoleucine          6.8         19           2
 K lysine              4.3         12           2
 L leucine            11.1         31           2
 M methionine          5.7         16           1
 N asparagine          3.2          9           1
 P proline             5.0         14           1
 Q glutamine           3.9         11           2
 R arginine            3.6         10           1
 S serine              7.9         22           2
 T threonine           3.2          9           1
 V valine              8.2         23           2
 W tryptophan          3.9         11           3
 Y tyrosine            7.2         20           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   elongation of very long chain fatty acids-like 1 [Ho... 
ELOVL7                0.596   elongation of very long chain fatty acids-like 7 [H...
ELOVL7                0.596   elongation of very long chain fatty acids-like 7 [H...
ELOVL4                0.340   elongation of very long chain fatty acids-like 4 [Ho...
ELOVL5                0.279   elongation of very long chain fatty acids-like 5 [Ho...
ELOVL2                0.258   elongation of very long chain fatty acids-like 2 [H...
ELOVL3                0.106   elongation of very long chain fatty acids like 3 [Ho...
ELOVL6                0.086   elongation of very long chain fatty acids-like 6 [H...
ELOVL6                0.086   elongation of very long chain fatty acids-like 6 [Ho...
LOC100289774          0.009   PREDICTED: hypothetical protein XP_002346899, parti...
LOC100289675          0.009   PREDICTED: hypothetical protein XP_002342756, parti...
LOC645634             0.005   PREDICTED: hypothetical protein 
LOC645634             0.005   PREDICTED: hypothetical protein 
XRN1                  0.005   5'-3' exoribonuclease 1 isoform b 
XRN1                  0.005   5'-3' exoribonuclease 1 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press