PSMD8 6030

Name: PSMD8	Sequence: fasta or formatted (350aa)		NCBI GI: 156631005
Description: proteasome 26S non-ATPase subunit 8		Referenced in: Proteasome Ubiquitin and Related Protein Modifications
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.7 34 4 C cysteine 1.4 5 1 D aspartate 2.6 9 1 E glutamate 6.9 24 2 F phenylalanine 4.3 15 2 G glycine 6.3 22 2 H histidine 1.1 4 1 I isoleucine 5.4 19 1 K lysine 6.9 24 2 L leucine 11.4 40 2 M methionine 2.3 8 1 N asparagine 3.4 12 2 P proline 5.1 18 2 Q glutamine 4.9 17 3 R arginine 8.0 28 3 S serine 6.0 21 3 T threonine 5.4 19 2 V valine 3.7 13 2 W tryptophan 0.9 3 1 Y tyrosine 4.3 15 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 proteasome 26S non-ATPase subunit 8 LOC441806 0.183 PREDICTED: hypothetical protein LOC441806 LOC441806 0.180 PREDICTED: similar to hCG1644617 LOC441806 0.180 PREDICTED: similar to hCG1644617 SH2B3 0.012 SH2B adaptor protein 3 HAUS7 0.010 UCH interacting protein 1 isoform b HAUS7 0.010 UCH interacting protein 1 isoform a PIBF1 0.010 progesterone-induced blocking factor 1 KIF13A 0.009 kinesin family member 13A isoform d KIF13A 0.009 kinesin family member 13A isoform c KIF13A 0.009 kinesin family member 13A isoform b KIF13A 0.009 kinesin family member 13A isoform a LOC729989 0.007 PREDICTED: hypothetical protein LOC729989 0.007 PREDICTED: hypothetical protein LOC729989 0.007 PREDICTED: hypothetical protein MAGED4B 0.007 melanoma antigen family D, 4B isoform 2 MAGED4B 0.007 melanoma antigen family D, 4B isoform 1 MAGED4B 0.007 melanoma antigen family D, 4B isoform 1 DMRT1 0.007 doublesex and mab-3 related transcription factor 1 [... MAGED4 0.007 melanoma antigen family D, 4 F8A1 0.007 coagulation factor VIII-associated protein F8A3 0.007 coagulation factor VIII-associated (intronic transcr... F8A2 0.007 coagulation factor VIII-associated (intronic transcr... TBCCD1 0.007 TBCC domain containing 1 TBCCD1 0.007 TBCC domain containing 1 LOC100292513 0.006 PREDICTED: hypothetical protein LOC100290082 0.006 PREDICTED: hypothetical protein XP_002347925 LOC730183 0.006 PREDICTED: hypothetical protein LOC100287331 0.006 PREDICTED: hypothetical protein XP_002344192 LOC100294438 0.004 PREDICTED: hypothetical protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.