Search of human proteins with 11036654

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|11036654 protocadherin beta 13 precursor [Homo sapiens]
         (798 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|11036654 protocadherin beta 13 precursor [Homo sapiens]           1569   0.0  
gi|11276081 protocadherin beta 8 precursor [Homo sapiens]            1440   0.0  
gi|9256614 protocadherin beta 3 precursor [Homo sapiens]             1202   0.0  
gi|14195605 protocadherin beta 16 precursor [Homo sapiens]           1197   0.0  
gi|9256610 protocadherin beta 15 precursor [Homo sapiens]            1161   0.0  
gi|9256608 protocadherin beta 14 precursor [Homo sapiens]            1159   0.0  
gi|9256612 protocadherin beta 2 precursor [Homo sapiens]             1155   0.0  
gi|9256618 protocadherin beta 6 precursor [Homo sapiens]             1152   0.0  
gi|9256606 protocadherin beta 12 precursor [Homo sapiens]            1148   0.0  
gi|9256602 protocadherin beta 10 precursor [Homo sapiens]            1144   0.0  
gi|14195616 protocadherin beta 9 precursor [Homo sapiens]            1143   0.0  
gi|9256604 protocadherin beta 11 precursor [Homo sapiens]            1142   0.0  
gi|9256616 protocadherin beta 4 precursor [Homo sapiens]             1139   0.0  
gi|7661662 protocadherin beta 5 precursor [Homo sapiens]             1139   0.0  
gi|11036656 protocadherin beta 7 precursor [Homo sapiens]            1123   0.0  
gi|14195607 protocadherin beta 1 precursor [Homo sapiens]             781   0.0  
gi|11056065 protocadherin gamma subfamily A, 6 isoform 1 precurs...   647   0.0  
gi|14196474 protocadherin gamma subfamily A, 6 isoform 2 precurs...   647   0.0  
gi|11056063 protocadherin gamma subfamily A, 7 isoform 1 precurs...   647   0.0  
gi|14196477 protocadherin gamma subfamily A, 7 isoform 2 precurs...   647   0.0  
gi|11128041 protocadherin gamma subfamily A, 10 isoform 1 precur...   642   0.0  
gi|14196448 protocadherin gamma subfamily A, 10 isoform 2 precur...   642   0.0  
gi|11056032 protocadherin gamma subfamily A, 1 isoform 1 precurs...   641   0.0  
gi|14196459 protocadherin gamma subfamily A, 1 isoform 2 precurs...   641   0.0  
gi|11128035 protocadherin gamma subfamily B, 2 isoform 1 precurs...   639   0.0  
gi|14270493 protocadherin gamma subfamily B, 2 isoform 2 precurs...   639   0.0  
gi|14196468 protocadherin gamma subfamily A, 4 isoform 2 precurs...   639   0.0  
gi|11056026 protocadherin gamma subfamily A, 4 isoform 1 precurs...   639   0.0  
gi|11056030 protocadherin gamma subfamily A, 2 isoform 1 precurs...   639   0.0  
gi|14196462 protocadherin gamma subfamily A, 2 isoform 2 precurs...   639   0.0  

>gi|11036654 protocadherin beta 13 precursor [Homo sapiens]
          Length = 798

 Score = 1569 bits (4063), Expect = 0.0
 Identities = 798/798 (100%), Positives = 798/798 (100%)

Query: 1   MEASGKLICRQRQVLFSFLLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREF 60
           MEASGKLICRQRQVLFSFLLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREF
Sbjct: 1   MEASGKLICRQRQVLFSFLLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREF 60

Query: 61  SRRGVRVVSRGNKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQA 120
           SRRGVRVVSRGNKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQA
Sbjct: 61  SRRGVRVVSRGNKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQA 120

Query: 121 ELQVIDINDHSPVFLDKQMLVKVSESSPPGTTFPLKNAEDLDVGQNNIENYIISPNSYFR 180
           ELQVIDINDHSPVFLDKQMLVKVSESSPPGTTFPLKNAEDLDVGQNNIENYIISPNSYFR
Sbjct: 121 ELQVIDINDHSPVFLDKQMLVKVSESSPPGTTFPLKNAEDLDVGQNNIENYIISPNSYFR 180

Query: 181 VLTRKRSDGRKYPELVLDKALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVLDVNDNA 240
           VLTRKRSDGRKYPELVLDKALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVLDVNDNA
Sbjct: 181 VLTRKRSDGRKYPELVLDKALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVLDVNDNA 240

Query: 241 PEFEQPFYRVQISEDSPVGFLVVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTG 300
           PEFEQPFYRVQISEDSPVGFLVVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTG
Sbjct: 241 PEFEQPFYRVQISEDSPVGFLVVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTG 300

Query: 301 EIELKKQLDFEKLQSYEVNIEARDAGTFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPEN 360
           EIELKKQLDFEKLQSYEVNIEARDAGTFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPEN
Sbjct: 301 EIELKKQLDFEKLQSYEVNIEARDAGTFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPEN 360

Query: 361 APETVVALFSVSDLDSGENGKISCSIQEDLPFLLKSAENFYTLLTERPLDRESRAEYNIT 420
           APETVVALFSVSDLDSGENGKISCSIQEDLPFLLKSAENFYTLLTERPLDRESRAEYNIT
Sbjct: 361 APETVVALFSVSDLDSGENGKISCSIQEDLPFLLKSAENFYTLLTERPLDRESRAEYNIT 420

Query: 421 ITVTDLGTPMLITQLNMTVLIADVNDNAPAFTQTSYTLFVRENNSPALHIRSVSATDRDS 480
           ITVTDLGTPMLITQLNMTVLIADVNDNAPAFTQTSYTLFVRENNSPALHIRSVSATDRDS
Sbjct: 421 ITVTDLGTPMLITQLNMTVLIADVNDNAPAFTQTSYTLFVRENNSPALHIRSVSATDRDS 480

Query: 481 GTNAQVTYSLLPPQDPHLPLTSLVSINADNGHLFALRSLDYEALQGFQFRVGASDHGSPA 540
           GTNAQVTYSLLPPQDPHLPLTSLVSINADNGHLFALRSLDYEALQGFQFRVGASDHGSPA
Sbjct: 481 GTNAQVTYSLLPPQDPHLPLTSLVSINADNGHLFALRSLDYEALQGFQFRVGASDHGSPA 540

Query: 541 LSSEALVRVVVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
           LSSEALVRVVVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA
Sbjct: 541 LSSEALVRVVVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600

Query: 601 WLSYQLLKATELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV 660
           WLSYQLLKATELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV
Sbjct: 601 WLSYQLLKATELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV 660

Query: 661 LLVDGFSQPYLPLPEAAPTQAQADLLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 720
           LLVDGFSQPYLPLPEAAPTQAQADLLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA
Sbjct: 661 LLVDGFSQPYLPLPEAAPTQAQADLLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 720

Query: 721 SVGRCLVPEGPLPGHLVDMSGTRTLSQSYQYEVCLAGGSGTNEFKFLKPIIPNFPPQCPG 780
           SVGRCLVPEGPLPGHLVDMSGTRTLSQSYQYEVCLAGGSGTNEFKFLKPIIPNFPPQCPG
Sbjct: 721 SVGRCLVPEGPLPGHLVDMSGTRTLSQSYQYEVCLAGGSGTNEFKFLKPIIPNFPPQCPG 780

Query: 781 KEIQGNSTFPNNFGFNIQ 798
           KEIQGNSTFPNNFGFNIQ
Sbjct: 781 KEIQGNSTFPNNFGFNIQ 798


>gi|11276081 protocadherin beta 8 precursor [Homo sapiens]
          Length = 801

 Score = 1440 bits (3728), Expect = 0.0
 Identities = 734/799 (91%), Positives = 758/799 (94%), Gaps = 1/799 (0%)

Query: 1   MEASGKLICRQRQVLFSFLLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREF 60
           MEASGKLICRQRQVLFSFLLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREF
Sbjct: 1   MEASGKLICRQRQVLFSFLLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREF 60

Query: 61  SRRGVRVVSRGNKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQA 120
           SRRGVRVVSRGNKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQA
Sbjct: 61  SRRGVRVVSRGNKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQA 120

Query: 121 ELQVIDINDHSPVFLDKQMLVKVSESSPPGTTFPLKNAEDLDVGQNNIENYIISPNSYFR 180
           ELQVIDINDHSPVFLDKQMLVKVSESSPPGT FPLKNAEDLD+GQNNIENYIISPNSYFR
Sbjct: 121 ELQVIDINDHSPVFLDKQMLVKVSESSPPGTAFPLKNAEDLDIGQNNIENYIISPNSYFR 180

Query: 181 VLTRKRSDGRKYPELVLDKALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVLDVNDNA 240
           VLTRKRSDGRKYPELVLD ALDREEEAELRLTLTALDGGSPPRSGTAQVYIEV+DVNDNA
Sbjct: 181 VLTRKRSDGRKYPELVLDNALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVVDVNDNA 240

Query: 241 PEFEQPFYRVQISEDSPVGFLVVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTG 300
           PEF+QPFYRVQISEDSP+ FLVVKVSATDVDTGVNGEISYSLFQAS+EI KTFK++ LTG
Sbjct: 241 PEFQQPFYRVQISEDSPISFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDFLTG 300

Query: 301 EIELKKQLDFEKLQSYEVNIEARDAGTFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPEN 360
           EI LKKQLDFEK QSYEVNIEARDAG FSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPEN
Sbjct: 301 EIRLKKQLDFEKFQSYEVNIEARDAGGFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPEN 360

Query: 361 APETVVALFSVSDLDSGENGKISCSIQEDLPFLLKSA-ENFYTLLTERPLDRESRAEYNI 419
           APETVVALFSVSDLDSGENGKISCSIQEDLPFLLKS+  NFYTLLTE PLDRESRAEYN+
Sbjct: 361 APETVVALFSVSDLDSGENGKISCSIQEDLPFLLKSSVGNFYTLLTETPLDRESRAEYNV 420

Query: 420 TITVTDLGTPMLITQLNMTVLIADVNDNAPAFTQTSYTLFVRENNSPALHIRSVSATDRD 479
           TITVTDLGTP L T LNMTVL++DVNDNAPAFTQTSYTLFVRENNSPALHI SVSATDRD
Sbjct: 421 TITVTDLGTPRLTTHLNMTVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRD 480

Query: 480 SGTNAQVTYSLLPPQDPHLPLTSLVSINADNGHLFALRSLDYEALQGFQFRVGASDHGSP 539
           SGTNAQVTYSLLPPQDPHLPL SLVSIN DNGHLFALRSLDYEALQ F+FRVGASD GSP
Sbjct: 481 SGTNAQVTYSLLPPQDPHLPLASLVSINTDNGHLFALRSLDYEALQAFEFRVGASDRGSP 540

Query: 540 ALSSEALVRVVVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN 599
           ALSSEALVRV+VLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN
Sbjct: 541 ALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN 600

Query: 600 AWLSYQLLKATELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLH 659
           AWLSYQLLKATE GLFGVWAHNGEVRTARLLSERDAAK RLVVLVKDNGEPP SATATLH
Sbjct: 601 AWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPCSATATLH 660

Query: 660 VLLVDGFSQPYLPLPEAAPTQAQADLLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRA 719
           +LLVDGFSQPYLPLPEAAP Q QAD LTVYLVVALASVSSLFLFSVLLFVAV LCRRSRA
Sbjct: 661 LLLVDGFSQPYLPLPEAAPAQGQADSLTVYLVVALASVSSLFLFSVLLFVAVLLCRRSRA 720

Query: 720 ASVGRCLVPEGPLPGHLVDMSGTRTLSQSYQYEVCLAGGSGTNEFKFLKPIIPNFPPQCP 779
           ASVGRC VPEGP PGHLVD+ GT +LSQ+YQYEVCLAGGSGTNEF+FLKP++PN      
Sbjct: 721 ASVGRCSVPEGPFPGHLVDVRGTGSLSQNYQYEVCLAGGSGTNEFQFLKPVLPNIQGHSF 780

Query: 780 GKEIQGNSTFPNNFGFNIQ 798
           G E++ NS F N FGF++Q
Sbjct: 781 GPEMEQNSNFRNGFGFSLQ 799


>gi|9256614 protocadherin beta 3 precursor [Homo sapiens]
          Length = 796

 Score = 1202 bits (3111), Expect = 0.0
 Identities = 603/797 (75%), Positives = 689/797 (86%), Gaps = 2/797 (0%)

Query: 1   MEASGKLICRQRQVLFSFLLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREF 60
           MEA G+   RQRQVL  F+ LG SLAG+ E R YSV EE E    + NLAKDLGL   E 
Sbjct: 1   MEAGGERFLRQRQVLLLFVFLGGSLAGS-ESRRYSVAEEKEKGFLIANLAKDLGLRVEEL 59

Query: 61  SRRGVRVVSRGNKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQA 120
           + RG +VVS+GNK H QL+ +T DLLLNEKLDRE+LCG TEPC+L FQ+LL++P +F   
Sbjct: 60  AARGAQVVSKGNKQHFQLSHQTGDLLLNEKLDREELCGPTEPCILHFQILLQNPLQFVTN 119

Query: 121 ELQVIDINDHSPVFLDKQMLVKVSESSPPGTTFPLKNAEDLDVGQNNIENYIISPNSYFR 180
           EL++ID+NDHSPVF + +M +K+ ES+ PGT  PL NAEDLDVG+N+++NY I+PNS+F 
Sbjct: 120 ELRIIDVNDHSPVFFENEMHLKILESTLPGTVIPLGNAEDLDVGRNSLQNYTITPNSHFH 179

Query: 181 VLTRKRSDGRKYPELVLDKALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVLDVNDNA 240
           VLTR R DGRKYPELVLDKALDREE+ EL LTLTALDGGSPPRSGTAQ+ I+VLD+NDNA
Sbjct: 180 VLTRSRRDGRKYPELVLDKALDREEQPELSLTLTALDGGSPPRSGTAQINIQVLDINDNA 239

Query: 241 PEFEQPFYRVQISEDSPVGFLVVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTG 300
           PEF QP Y V + E++PV  ++V VSA+D+DTG  G ISY+ F ASEEI KTF++NP+TG
Sbjct: 240 PEFAQPLYEVAVLENTPVNSVIVTVSASDLDTGSFGTISYAFFHASEEIRKTFQLNPITG 299

Query: 301 EIELKKQLDFEKLQSYEVNIEARDAGTFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPEN 360
           +++L K L+FE + SYEV+IEA+D G  SGK TV++QV+DVND+ PE+T+S+  SPIPEN
Sbjct: 300 DMQLVKYLNFEAINSYEVDIEAKDGGGLSGKSTVIVQVVDVNDNPPELTLSSVNSPIPEN 359

Query: 361 APETVVALFSVSDLDSGENGKISCSIQEDLPFLLK-SAENFYTLLTERPLDRESRAEYNI 419
           + ETV+A+FSVSDLDSG+NG++ CSI+ +LPF LK S ENFYTL++E  LDRE+R+EYNI
Sbjct: 360 SGETVLAVFSVSDLDSGDNGRVMCSIENNLPFFLKPSVENFYTLVSEGALDRETRSEYNI 419

Query: 420 TITVTDLGTPMLITQLNMTVLIADVNDNAPAFTQTSYTLFVRENNSPALHIRSVSATDRD 479
           TIT+TDLGTP L T+ N+TVL++DVNDNAPAFTQ SYTLFVRENNSPALHI SVSATDRD
Sbjct: 420 TITITDLGTPRLKTKYNITVLVSDVNDNAPAFTQISYTLFVRENNSPALHIGSVSATDRD 479

Query: 480 SGTNAQVTYSLLPPQDPHLPLTSLVSINADNGHLFALRSLDYEALQGFQFRVGASDHGSP 539
           SGTNAQVTYSLLPPQDPHLPL+SLVSINADNGHLFALRSLDYEALQ F+FRVGA+D GSP
Sbjct: 480 SGTNAQVTYSLLPPQDPHLPLSSLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSP 539

Query: 540 ALSSEALVRVVVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN 599
           ALSSEALVRV+VLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN
Sbjct: 540 ALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN 599

Query: 600 AWLSYQLLKATELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLH 659
           AWLSYQLLKATE GLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLH
Sbjct: 600 AWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLH 659

Query: 660 VLLVDGFSQPYLPLPEAAPTQAQADLLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRA 719
           VLLVDGFSQPYLPLPEAAP QAQADLLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRA
Sbjct: 660 VLLVDGFSQPYLPLPEAAPAQAQADLLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRA 719

Query: 720 ASVGRCLVPEGPLPGHLVDMSGTRTLSQSYQYEVCLAGGSGTNEFKFLKPIIPNFPPQCP 779
           ASVGRC VPEGP PG +VD+SGT TLSQSYQYEVCL GGSGTNEFKFLKPIIPNF  Q  
Sbjct: 720 ASVGRCSVPEGPFPGQMVDVSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNFVAQGA 779

Query: 780 GKEIQGNSTFPNNFGFN 796
            +  + N +F  +F F+
Sbjct: 780 ERVSEANPSFRKSFEFS 796


>gi|14195605 protocadherin beta 16 precursor [Homo sapiens]
          Length = 776

 Score = 1197 bits (3098), Expect = 0.0
 Identities = 609/768 (79%), Positives = 675/768 (87%), Gaps = 2/768 (0%)

Query: 10  RQRQVLFSFLLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREFSRRGVRVVS 69
           RQRQVL  F+LL LS AGA E  SYSVVEETE  SFV NL KDLGL   E S R  R++S
Sbjct: 10  RQRQVLVFFVLLSLSGAGA-ELGSYSVVEETERGSFVANLGKDLGLGLTEMSTRKARIIS 68

Query: 70  RGNKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQAELQVIDIND 129
           +GNK HLQL  +T DLL+NEKLDRE+LCG TEPC+L FQVL+E+P E FQAEL+VIDIND
Sbjct: 69  QGNKQHLQLKAQTGDLLINEKLDREELCGPTEPCILHFQVLMENPLEIFQAELRVIDIND 128

Query: 130 HSPVFLDKQMLVKVSESSPPGTTFPLKNAEDLDVGQNNIENYIISPNSYFRVLTRKRSDG 189
           HSP+F +K+M++K+ E+SP GT FPL +A DLDVG NN++NY ISP+S+FRVL  +  DG
Sbjct: 129 HSPMFTEKEMILKIPENSPLGTEFPLNHALDLDVGSNNVQNYKISPSSHFRVLIHEFRDG 188

Query: 190 RKYPELVLDKALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVLDVNDNAPEFEQPFYR 249
           RKYPELVLDK LDREEE +LRLTLTALDGGSPPRSGTAQV IEV+D+NDNAPEFEQP Y+
Sbjct: 189 RKYPELVLDKELDREEEPQLRLTLTALDGGSPPRSGTAQVRIEVVDINDNAPEFEQPIYK 248

Query: 250 VQISEDSPVGFLVVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTGEIELKKQLD 309
           VQI E+SP+G LV  VSA D+D G NG+ISY+LFQ SE+I KT ++NP+TGE+ L+KQ+D
Sbjct: 249 VQIPENSPLGSLVATVSARDLDGGANGKISYTLFQPSEDISKTLEVNPMTGEVRLRKQVD 308

Query: 310 FEKLQSYEVNIEARDAGTFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENAPETVVALF 369
           FE + SYEV I+A D G  SGKCT+L+QV+DVND+ P+VTMSA TSPIPEN+PE VVA+F
Sbjct: 309 FEMVTSYEVRIKATDGGGLSGKCTLLLQVVDVNDNPPQVTMSALTSPIPENSPEIVVAVF 368

Query: 370 SVSDLDSGENGKISCSIQEDLPFLLK-SAENFYTLLTERPLDRESRAEYNITITVTDLGT 428
           SVSD DSG NGK   SIQEDLPFLLK S +NFYTL+TER LDRE+RAEYNIT+TVTD+GT
Sbjct: 369 SVSDPDSGNNGKTISSIQEDLPFLLKPSVKNFYTLVTERALDREARAEYNITLTVTDMGT 428

Query: 429 PMLITQLNMTVLIADVNDNAPAFTQTSYTLFVRENNSPALHIRSVSATDRDSGTNAQVTY 488
           P L T+ N+TV I+DVNDNAP FTQTSYTLFVRENNSPALHI SVSATDRDSGTNAQVTY
Sbjct: 429 PRLKTEHNITVQISDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTY 488

Query: 489 SLLPPQDPHLPLTSLVSINADNGHLFALRSLDYEALQGFQFRVGASDHGSPALSSEALVR 548
           SLLPPQDPHLPL SLVSINADNGHLFALRSLDYEAL+ F+FRV A+D GSPALSSEALVR
Sbjct: 489 SLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALREFEFRVSATDRGSPALSSEALVR 548

Query: 549 VVVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK 608
           V+VLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK
Sbjct: 549 VLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK 608

Query: 609 ATELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQ 668
           ATE GLFGVWAHNGEVRTARLLSERDAAK RLVVLVKDNGEPPRSATATLHVLLVDGFSQ
Sbjct: 609 ATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHVLLVDGFSQ 668

Query: 669 PYLPLPEAAPTQAQADLLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRCLVP 728
           P+LPLPEAAP Q QA+ LTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRC +P
Sbjct: 669 PFLPLPEAAPGQTQANSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRCSMP 728

Query: 729 EGPLPGHLVDMSGTRTLSQSYQYEVCLAGGSGTNEFKFLKPIIPNFPP 776
           EGP PG LVD+SGT TLSQSYQYEVCL GGS T+EFKFLKPIIPNF P
Sbjct: 729 EGPFPGRLVDVSGTGTLSQSYQYEVCLTGGSETSEFKFLKPIIPNFSP 776


>gi|9256610 protocadherin beta 15 precursor [Homo sapiens]
          Length = 787

 Score = 1161 bits (3003), Expect = 0.0
 Identities = 592/778 (76%), Positives = 663/778 (85%), Gaps = 2/778 (0%)

Query: 1   MEASGKLICRQRQVLFSFLLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREF 60
           ME +G+    QRQVL   LLL ++LAG  EPR YSV+EETE  SFV NLA DLGL   E 
Sbjct: 1   MEPAGERFPEQRQVLILLLLLEVTLAGW-EPRRYSVMEETERGSFVANLANDLGLGVGEL 59

Query: 61  SRRGVRVVSRGNKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQA 120
           + RG RVVS  N+  LQL+ +T  L+LNEKLDRE LCG TEPC++ FQVLL+ P E F+A
Sbjct: 60  AERGARVVSEDNEQGLQLDLQTGQLILNEKLDREKLCGPTEPCIMHFQVLLKKPLEVFRA 119

Query: 121 ELQVIDINDHSPVFLDKQMLVKVSESSPPGTTFPLKNAEDLDVGQNNIENYIISPNSYFR 180
           EL V DINDHSP F +++M +K+ E+S  GT FPLK A DLDVG NN++NY ISPNS+F 
Sbjct: 120 ELLVTDINDHSPEFPEREMTLKIPETSSLGTVFPLKKARDLDVGSNNVQNYNISPNSHFH 179

Query: 181 VLTRKRSDGRKYPELVLDKALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVLDVNDNA 240
           V TR R DGRKYPELVLD  LDREE+AELRLTLTA+DGGSPPRSGT Q+ I VLD NDNA
Sbjct: 180 VSTRTRGDGRKYPELVLDTELDREEQAELRLTLTAVDGGSPPRSGTVQILILVLDANDNA 239

Query: 241 PEFEQPFYRVQISEDSPVGFLVVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTG 300
           PEF Q  Y VQ+ E+SPVG LVVKVSA D+DTG NGEISYSL+ +S+EI K F+++ L+G
Sbjct: 240 PEFVQALYEVQVPENSPVGSLVVKVSARDLDTGTNGEISYSLYYSSQEIDKPFELSSLSG 299

Query: 301 EIELKKQLDFEKLQSYEVNIEARDAGTFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPEN 360
           EI L K+LDFE + SY+++IEA D G  SGKC+V ++V+DVND+ PE+++S+ TSPIPEN
Sbjct: 300 EIRLIKKLDFETMSSYDLDIEASDGGGLSGKCSVSVKVLDVNDNFPELSISSLTSPIPEN 359

Query: 361 APETVVALFSVSDLDSGENGKISCSIQEDLPFLLK-SAENFYTLLTERPLDRESRAEYNI 419
           +PET VALF + D DSGENGK+ CSIQ+D+PF LK S ENFY L+TE  LDRE+RAEYNI
Sbjct: 360 SPETEVALFRIRDRDSGENGKMICSIQDDVPFKLKPSVENFYRLVTEGALDRETRAEYNI 419

Query: 420 TITVTDLGTPMLITQLNMTVLIADVNDNAPAFTQTSYTLFVRENNSPALHIRSVSATDRD 479
           TIT+TDLGTP L T+ ++TVL++DVNDNAPAFTQTSYTLFVRENNSPALHI SVSATDRD
Sbjct: 420 TITITDLGTPRLKTEQSITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRD 479

Query: 480 SGTNAQVTYSLLPPQDPHLPLTSLVSINADNGHLFALRSLDYEALQGFQFRVGASDHGSP 539
           SGTNAQVTYSLLPP+DPHLPLTSLVSIN DNGHLFAL+SLDYEALQ F+FRVGA+D G P
Sbjct: 480 SGTNAQVTYSLLPPRDPHLPLTSLVSINTDNGHLFALQSLDYEALQAFEFRVGATDRGFP 539

Query: 540 ALSSEALVRVVVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN 599
           ALSSEALVRV+VLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN
Sbjct: 540 ALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN 599

Query: 600 AWLSYQLLKATELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLH 659
           AWLSYQLLKATE GLFGVWAHNGEVRTARLLSERD AKHRLVVLVKDNGEPPRSATATL 
Sbjct: 600 AWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDVAKHRLVVLVKDNGEPPRSATATLQ 659

Query: 660 VLLVDGFSQPYLPLPEAAPTQAQADLLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRA 719
           VLLVDGFSQPYLPLPEAAP QAQAD LTVYLVVALASVSSLFLFSV LFVAVRLCRRSRA
Sbjct: 660 VLLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVFLFVAVRLCRRSRA 719

Query: 720 ASVGRCLVPEGPLPGHLVDMSGTRTLSQSYQYEVCLAGGSGTNEFKFLKPIIPNFPPQ 777
           ASVGRC VPEGP PGHLVD+SGT TLSQSYQYEVCL GGS +N+FKFLKPI PN   Q
Sbjct: 720 ASVGRCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSESNDFKFLKPIFPNIVSQ 777


>gi|9256608 protocadherin beta 14 precursor [Homo sapiens]
          Length = 798

 Score = 1159 bits (2999), Expect = 0.0
 Identities = 591/799 (73%), Positives = 672/799 (84%), Gaps = 2/799 (0%)

Query: 1   MEASGKLICRQRQVLFSFLLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREF 60
           ME  G L  R+RQVL   +LLGLS AG  E   YSV EETE  SFV NLA+DLGL   E 
Sbjct: 1   MEIRGALDLRKRQVLIFLVLLGLSRAGT-ESAHYSVAEETEIGSFVANLARDLGLGVEEL 59

Query: 61  SRRGVRVVSRGNKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQA 120
           S R  RVVS  NK +L L+  T +LLLNEKLDR++LCG TEPCVL FQV+LE+P +FF+ 
Sbjct: 60  SSREARVVSDDNKKYLHLDLLTGNLLLNEKLDRDELCGSTEPCVLHFQVVLENPLQFFRF 119

Query: 121 ELQVIDINDHSPVFLDKQMLVKVSESSPPGTTFPLKNAEDLDVGQNNIENYIISPNSYFR 180
           EL V DINDHSP FLDK++L+K+SE +  G TF +++A+DLDVG N+++NY ISPNS+F 
Sbjct: 120 ELCVKDINDHSPTFLDKEILIKISEGTTVGATFLMESAQDLDVGSNSLQNYTISPNSHFY 179

Query: 181 VLTRKRSDGRKYPELVLDKALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVLDVNDNA 240
           +     SD + YPELVLD+ALD E+EAELRLTLTA+DGGSPP+SGT  V I+VLD+NDNA
Sbjct: 180 IKIPDSSDRKIYPELVLDRALDYEQEAELRLTLTAVDGGSPPKSGTTLVLIKVLDINDNA 239

Query: 241 PEFEQPFYRVQISEDSPVGFLVVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTG 300
           PEF Q  Y VQ+ ED P+G  +  +SA D+D G  G+ISY+ F ASE+I KTF+INP++G
Sbjct: 240 PEFPQSLYEVQVPEDRPLGSWIATISAKDLDAGNYGKISYTFFHASEDIRKTFEINPISG 299

Query: 301 EIELKKQLDFEKLQSYEVNIEARDAGTFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPEN 360
           E+ L+  LDFE +QSY +NI+A D G  SGKCT+L++V+D+ND+ PEVT+S+ T  IPEN
Sbjct: 300 EVNLRSPLDFEVIQSYTINIQATDGGGLSGKCTLLVKVMDINDNPPEVTISSITKRIPEN 359

Query: 361 APETVVALFSVSDLDSGENGKISCSIQEDLPFLLKSA-ENFYTLLTERPLDRESRAEYNI 419
           A ET+VALFS+ D DSG+NG++ CSIQ++LPF LK   +NF+TL++E+ LDRES+AEYNI
Sbjct: 360 ASETLVALFSILDQDSGDNGRMICSIQDNLPFFLKPTFKNFFTLVSEKALDRESQAEYNI 419

Query: 420 TITVTDLGTPMLITQLNMTVLIADVNDNAPAFTQTSYTLFVRENNSPALHIRSVSATDRD 479
           TITVTDLGTP L T+ N+TVL++DVNDNAP FTQTSYTLFVRENNSPALHI SVSATDRD
Sbjct: 420 TITVTDLGTPRLKTEYNITVLLSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRD 479

Query: 480 SGTNAQVTYSLLPPQDPHLPLTSLVSINADNGHLFALRSLDYEALQGFQFRVGASDHGSP 539
           SGTNAQV YSLLPPQD HLPL SLVSINADNGHLFALRSLDYEALQ F+FRVGA+D GSP
Sbjct: 480 SGTNAQVNYSLLPPQDRHLPLASLVSINADNGHLFALRSLDYEALQEFEFRVGATDRGSP 539

Query: 540 ALSSEALVRVVVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN 599
           ALSSEALVRV+VLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN
Sbjct: 540 ALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN 599

Query: 600 AWLSYQLLKATELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLH 659
           AWLSYQLLKATE GLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLH
Sbjct: 600 AWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLH 659

Query: 660 VLLVDGFSQPYLPLPEAAPTQAQADLLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRA 719
           VLLVDGFSQPYLPLPEAAP QAQAD LTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRA
Sbjct: 660 VLLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRA 719

Query: 720 ASVGRCLVPEGPLPGHLVDMSGTRTLSQSYQYEVCLAGGSGTNEFKFLKPIIPNFPPQCP 779
           ASVGRC VPEGP PGHLVD+SGT TLSQSYQYEVCL GGSGTNEFKFLKPIIPNF     
Sbjct: 720 ASVGRCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNFQVHDT 779

Query: 780 GKEIQGNSTFPNNFGFNIQ 798
           G+ +     F N+FG NIQ
Sbjct: 780 GRNMGEIENFRNSFGLNIQ 798


>gi|9256612 protocadherin beta 2 precursor [Homo sapiens]
          Length = 798

 Score = 1155 bits (2989), Expect = 0.0
 Identities = 586/787 (74%), Positives = 670/787 (85%), Gaps = 2/787 (0%)

Query: 10  RQRQVLFSFLLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREFSRRGVRVVS 69
           +QRQVL  F+LLG++ A + +PR YSV EETE  SFV NL KDLGLE  E + RG RVVS
Sbjct: 12  KQRQVLIFFVLLGIAQA-SCQPRHYSVAEETESGSFVANLLKDLGLEIGELAVRGARVVS 70

Query: 70  RGNKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQAELQVIDIND 129
           +G K+HLQ +++T DLLLNEKLDRE+LCG TEPCVL FQVLLE+P +FFQAEL++ D+ND
Sbjct: 71  KGKKMHLQFDRQTGDLLLNEKLDREELCGPTEPCVLPFQVLLENPLQFFQAELRIRDVND 130

Query: 130 HSPVFLDKQMLVKVSESSPPGTTFPLKNAEDLDVGQNNIENYIISPNSYFRVLTRKRSDG 189
           HSPVFLDK++L+K+ ES  PGTTF ++ A+DLDVG N+++NY ISPN +F +  +   DG
Sbjct: 131 HSPVFLDKEILLKIPESITPGTTFLIERAQDLDVGTNSLQNYTISPNFHFHLNLQDSLDG 190

Query: 190 RKYPELVLDKALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVLDVNDNAPEFEQPFYR 249
              P+LVL++ALDREE+ E+RLTLTALDGGSPPRSGTA V IEV+D+NDN PEF +  Y 
Sbjct: 191 IILPQLVLNRALDREEQPEIRLTLTALDGGSPPRSGTALVRIEVVDINDNVPEFAKLLYE 250

Query: 250 VQISEDSPVGFLVVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTGEIELKKQLD 309
           VQI EDSPVG  V  VSA D+D G NGEISY+  QASE+I KTF+++  +GE+ L+++LD
Sbjct: 251 VQIPEDSPVGSQVAIVSARDLDIGTNGEISYAFSQASEDIRKTFRLSAKSGELLLRQKLD 310

Query: 310 FEKLQSYEVNIEARDAGTFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENAPETVVALF 369
           FE +Q+Y VNI+A D G  SG C V +QV+D+ND+ PE+TMS   + IPEN  +T++A+F
Sbjct: 311 FESIQTYTVNIQATDGGGLSGTCVVFVQVMDLNDNPPELTMSTLINQIPENLQDTLIAVF 370

Query: 370 SVSDLDSGENGKISCSIQEDLPFLLK-SAENFYTLLTERPLDRESRAEYNITITVTDLGT 428
           SVSD DSG+NG++ CSIQ+DLPF LK S ENFYTL+    LDRE+R+EYNITITVTD GT
Sbjct: 371 SVSDPDSGDNGRMVCSIQDDLPFFLKPSVENFYTLVISTALDRETRSEYNITITVTDFGT 430

Query: 429 PMLITQLNMTVLIADVNDNAPAFTQTSYTLFVRENNSPALHIRSVSATDRDSGTNAQVTY 488
           P L T+ N+TVL++DVNDNAPAFTQTSYTLFVRENNSPALHI SVSATDRDSGTNAQVTY
Sbjct: 431 PRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTY 490

Query: 489 SLLPPQDPHLPLTSLVSINADNGHLFALRSLDYEALQGFQFRVGASDHGSPALSSEALVR 548
           SLLPPQDPHLPL SLVSINADNGHLFAL+SLDYEALQ F+FRVGA+D GSPALSSEALVR
Sbjct: 491 SLLPPQDPHLPLASLVSINADNGHLFALQSLDYEALQAFEFRVGAADRGSPALSSEALVR 550

Query: 549 VVVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK 608
           V+VLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK
Sbjct: 551 VLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK 610

Query: 609 ATELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQ 668
           ATE GLFGVWAHNGEVRTARLL ERDAAK RLVVLVKDNGEPPRSATATLHVLLVDGFSQ
Sbjct: 611 ATEPGLFGVWAHNGEVRTARLLRERDAAKQRLVVLVKDNGEPPRSATATLHVLLVDGFSQ 670

Query: 669 PYLPLPEAAPTQAQADLLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRCLVP 728
           PYL LPEAAP QAQADLLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRC VP
Sbjct: 671 PYLLLPEAAPAQAQADLLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRCSVP 730

Query: 729 EGPLPGHLVDMSGTRTLSQSYQYEVCLAGGSGTNEFKFLKPIIPNFPPQCPGKEIQGNST 788
           EGP PG +VD+SGT TLSQSYQYEVCL GGSGTNEFKFLKPIIPNF  Q   +  + N +
Sbjct: 731 EGPFPGQMVDVSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNFVAQGAERVSEANPS 790

Query: 789 FPNNFGF 795
           F  +F F
Sbjct: 791 FRKSFEF 797


>gi|9256618 protocadherin beta 6 precursor [Homo sapiens]
          Length = 794

 Score = 1152 bits (2980), Expect = 0.0
 Identities = 584/788 (74%), Positives = 670/788 (85%), Gaps = 3/788 (0%)

Query: 10  RQRQVLFSFLLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREFSRRGVRVVS 69
           ++RQV F F+LL L     +E   YSV+EETE  +FV NL KDLGL   E + RG RVV 
Sbjct: 9   KKRQVAF-FILLMLWGEVGSESIQYSVLEETESGTFVANLTKDLGLRVGELASRGARVVF 67

Query: 70  RGNKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQAELQVIDIND 129
           +GN+ HLQ + +T DLLLNEKLDRE+LCG TEPCVL FQVLLE+P +FFQA L+V DIND
Sbjct: 68  KGNRQHLQFDPQTHDLLLNEKLDREELCGSTEPCVLPFQVLLENPLQFFQASLRVRDIND 127

Query: 130 HSPVFLDKQMLVKVSESSPPGTTFPLKNAEDLDVGQNNIENYIISPNSYFRVLTRKRSDG 189
           H+P F  ++ML+K+SE + PG  FPLK A DLD G N ++ Y IS N +F VLTR RS+G
Sbjct: 128 HAPEFPAREMLLKISEITMPGKIFPLKMAHDLDTGSNGLQRYTISSNPHFHVLTRNRSEG 187

Query: 190 RKYPELVLDKALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVLDVNDNAPEFEQPFYR 249
           RK+PELVLDK LDREE+ +LRLTL ALDGGSPPRSGT+++ I+VLD+NDN PEF Q  Y 
Sbjct: 188 RKFPELVLDKPLDREEQPQLRLTLIALDGGSPPRSGTSEIQIQVLDINDNVPEFAQELYE 247

Query: 250 VQISEDSPVGFLVVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTGEIELKKQLD 309
            Q+ E++P+G LV+ VSA D+D G  G++SY+LFQ  +++ + F+IN +TGEI L+K LD
Sbjct: 248 AQVPENNPLGSLVITVSARDLDAGSFGKVSYALFQV-DDVNQPFEINAITGEIRLRKALD 306

Query: 310 FEKLQSYEVNIEARDAGTFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENAPETVVALF 369
           FE++QSY+V++EA D G  SGKC+++++V+DVND+APE+TMS F S IPEN PE  VA+F
Sbjct: 307 FEEIQSYDVDVEATDGGGLSGKCSLVVRVLDVNDNAPELTMSFFISLIPENLPEITVAVF 366

Query: 370 SVSDLDSGENGKISCSIQEDLPFLLK-SAENFYTLLTERPLDRESRAEYNITITVTDLGT 428
           SVSD DSG N ++ CSI+ +LPFLL+ S ENFYTL+TE  LDRESRAEYNITITVTDLGT
Sbjct: 367 SVSDADSGHNQQVICSIENNLPFLLRPSVENFYTLVTEGALDRESRAEYNITITVTDLGT 426

Query: 429 PMLITQLNMTVLIADVNDNAPAFTQTSYTLFVRENNSPALHIRSVSATDRDSGTNAQVTY 488
           P L TQ ++TV ++DVNDN PAFTQTSYTLFVRENNSPALHI SVSATDRDSG NAQVTY
Sbjct: 427 PRLKTQQSITVQVSDVNDNVPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGINAQVTY 486

Query: 489 SLLPPQDPHLPLTSLVSINADNGHLFALRSLDYEALQGFQFRVGASDHGSPALSSEALVR 548
           SLLPPQDPHLPL+SLVSINADNGHLFALRSLDYEALQ F+FRVGA+D GSPALSSEALVR
Sbjct: 487 SLLPPQDPHLPLSSLVSINADNGHLFALRSLDYEALQSFEFRVGATDRGSPALSSEALVR 546

Query: 549 VVVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK 608
           ++VLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK
Sbjct: 547 LLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK 606

Query: 609 ATELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQ 668
           ATELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQ
Sbjct: 607 ATELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQ 666

Query: 669 PYLPLPEAAPTQAQADLLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRCLVP 728
           PYLPLPEAAP QAQAD LTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGR  VP
Sbjct: 667 PYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRYSVP 726

Query: 729 EGPLPGHLVDMSGTRTLSQSYQYEVCLAGGSGTNEFKFLKPIIPNFPPQCPGKEIQGNST 788
           EGP PGHLVD+SGT TLSQSYQY+VCL GGS TNEFKFLKPI+PNFPPQ   +E++   T
Sbjct: 727 EGPFPGHLVDVSGTGTLSQSYQYKVCLTGGSETNEFKFLKPIMPNFPPQGTEREMEETPT 786

Query: 789 FPNNFGFN 796
             N+F F+
Sbjct: 787 SRNSFPFS 794


>gi|9256606 protocadherin beta 12 precursor [Homo sapiens]
          Length = 795

 Score = 1148 bits (2970), Expect = 0.0
 Identities = 591/796 (74%), Positives = 664/796 (83%), Gaps = 2/796 (0%)

Query: 1   MEASGKLICRQRQVLFSFLLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREF 60
           ME  G    + RQVL  F+LLG+S AG+ E  ++ V+EE +  SFV NLAK LGLE  E 
Sbjct: 1   MENGGAGTLQIRQVLLFFVLLGMSQAGS-ETGNFLVMEELQSGSFVGNLAKTLGLEVSEL 59

Query: 61  SRRGVRVVSRGNKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQA 120
           S RG RVVS  NK  LQL+  T DLLL E LDRE+LCG  EPCVL FQVL+++P +F Q 
Sbjct: 60  SSRGARVVSNDNKECLQLDTNTGDLLLREMLDREELCGSNEPCVLYFQVLMKNPTQFLQI 119

Query: 121 ELQVIDINDHSPVFLDKQMLVKVSESSPPGTTFPLKNAEDLDVGQNNIENYIISPNSYFR 180
           ELQV DINDHSPVFL+K+ML+++ E+SP G  F L++A+DLDVG N +++Y I+PNS+F 
Sbjct: 120 ELQVRDINDHSPVFLEKEMLLEIPENSPVGAVFLLESAKDLDVGINAVKSYTINPNSHFH 179

Query: 181 VLTRKRSDGRKYPELVLDKALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVLDVNDNA 240
           V  R   D RKYPELVLDKALD EE  EL   LTALDGGSPPRSGTA V + V+D+NDN+
Sbjct: 180 VKIRVNPDNRKYPELVLDKALDYEERPELSFILTALDGGSPPRSGTALVRVVVVDINDNS 239

Query: 241 PEFEQPFYRVQISEDSPVGFLVVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTG 300
           PEFEQ FY V+I E+S +G LVV VSA D+D+G N E+SY+   ASE+I KTF+IN  +G
Sbjct: 240 PEFEQAFYEVKILENSILGSLVVTVSAWDLDSGTNSELSYTFSHASEDIRKTFEINQKSG 299

Query: 301 EIELKKQLDFEKLQSYEVNIEARDAGTFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPEN 360
           +I L   LDFE ++SY + I+A D G   GK TV IQV+DVND+APE+T+S+ TSPIPEN
Sbjct: 300 DITLTAPLDFEAIESYSIIIQATDGGGLFGKSTVRIQVMDVNDNAPEITVSSITSPIPEN 359

Query: 361 APETVVALFSVSDLDSGENGKISCSIQEDLPFLLKSA-ENFYTLLTERPLDRESRAEYNI 419
            PETVV +F + D DSG+NGK+ CSI ED+PF+LKS+  N+YTL TERPLDRESRAEYNI
Sbjct: 360 TPETVVMVFRIRDRDSGDNGKMVCSIPEDIPFVLKSSVNNYYTLETERPLDRESRAEYNI 419

Query: 420 TITVTDLGTPMLITQLNMTVLIADVNDNAPAFTQTSYTLFVRENNSPALHIRSVSATDRD 479
           TITVTDLGTP L T+ N+TVL++DVNDNAPAFTQTSY LFVRENNSPALHI S+SATDRD
Sbjct: 420 TITVTDLGTPRLKTEHNITVLVSDVNDNAPAFTQTSYALFVRENNSPALHIGSISATDRD 479

Query: 480 SGTNAQVTYSLLPPQDPHLPLTSLVSINADNGHLFALRSLDYEALQGFQFRVGASDHGSP 539
           SGTNAQV YSLLP QDPHLPL SLVSINADNGHLFALRSLDYEALQGFQFRVGA+DHGSP
Sbjct: 480 SGTNAQVNYSLLPSQDPHLPLASLVSINADNGHLFALRSLDYEALQGFQFRVGATDHGSP 539

Query: 540 ALSSEALVRVVVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN 599
           ALSSEALVRV+VLDANDNSPFVLYPLQNGSAPCTELVP AAEPGYLVTKVVAVDGDSGQN
Sbjct: 540 ALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPWAAEPGYLVTKVVAVDGDSGQN 599

Query: 600 AWLSYQLLKATELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLH 659
           AWLSYQLLKATE GLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLH
Sbjct: 600 AWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLH 659

Query: 660 VLLVDGFSQPYLPLPEAAPTQAQADLLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRA 719
           VLLVDGFSQPYLPLPEAAP QAQAD LTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRA
Sbjct: 660 VLLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRA 719

Query: 720 ASVGRCLVPEGPLPGHLVDMSGTRTLSQSYQYEVCLAGGSGTNEFKFLKPIIPNFPPQCP 779
           A VGRC VPEGP PGHLVD+SGT TLSQSY YEVC+ GGS +N+FKFLKPIIPNF PQ  
Sbjct: 720 APVGRCSVPEGPFPGHLVDVSGTGTLSQSYHYEVCVTGGSRSNKFKFLKPIIPNFLPQST 779

Query: 780 GKEIQGNSTFPNNFGF 795
           G E++ N  F NN GF
Sbjct: 780 GSEVEENPPFQNNLGF 795


>gi|9256602 protocadherin beta 10 precursor [Homo sapiens]
          Length = 800

 Score = 1144 bits (2959), Expect = 0.0
 Identities = 584/792 (73%), Positives = 664/792 (83%), Gaps = 4/792 (0%)

Query: 10  RQRQVLFSFLLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREFSRRGVRVVS 69
           RQRQVLF FL  G+SLAG+   R YSV EETE  SFV NLAKDLGL + E + RG RVVS
Sbjct: 10  RQRQVLFLFLFWGVSLAGSGFGR-YSVTEETEKGSFVVNLAKDLGLAEGELAARGTRVVS 68

Query: 70  RGNKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQAELQVIDIND 129
             NK +L L+  T +LL NEKLDRE LCG  EPC+L FQ+L++ PF+ ++AEL+V DIND
Sbjct: 69  DDNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAELRVRDIND 128

Query: 130 HSPVFLDKQMLVKVSESSPPGTTFPLKNAEDLDVGQNNIENYIISPNSYFRVLTRKRSDG 189
           H+PVF DK+ ++K+SE++  GT F L+ A+D D G N I+NY ISPNS+F +      +G
Sbjct: 129 HAPVFQDKETVLKISENTAEGTAFRLERAQDPDGGLNGIQNYTISPNSFFHINISGGDEG 188

Query: 190 RKYPELVLDKALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVLDVNDNAPEFEQPFYR 249
             YPELVLDKALDREE+ EL LTLTALDGGSP RSGT+ V I VLDVNDNAP+F Q  Y 
Sbjct: 189 MIYPELVLDKALDREEQGELSLTLTALDGGSPSRSGTSTVRIVVLDVNDNAPQFAQALYE 248

Query: 250 VQISEDSPVGFLVVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTGEIELKKQLD 309
            Q  E+SP+GFL+VKV A DVD+GVN E+SYS F ASE I  TF+INP +GEI L++ LD
Sbjct: 249 TQAPENSPIGFLIVKVWAEDVDSGVNAEVSYSFFDASENIRTTFQINPFSGEIFLRELLD 308

Query: 310 FEKLQSYEVNIEARDAGTFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENAPETVVALF 369
           +E + SY++NI+A D G  S +C VL++V+D ND+ PE+ +S+F++ + EN+PET +A+F
Sbjct: 309 YELVNSYKINIQAMDGGGLSARCRVLVEVLDTNDNPPELIVSSFSNSVAENSPETPLAVF 368

Query: 370 SVSDLDSGENGKISCSIQEDLPFLLK-SAENFYTLLTERPLDRESRAEYNITITVTDLGT 428
            ++D DSGENGK+ C IQE+LPFLLK S ENFY L+TE  LDRE RAEYNITITVTDLGT
Sbjct: 369 KINDRDSGENGKMVCYIQENLPFLLKPSVENFYILITEGALDREIRAEYNITITVTDLGT 428

Query: 429 PMLITQLNMTVLIADVNDNAPAFTQTSYTLFVRENNSPALHIRSVSATDRDSGTNAQVTY 488
           P L T+ N+TVL++DVNDNAPAFTQTSYTLFVRENNSPALHI SVSATDRDSGTNAQVTY
Sbjct: 429 PRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTY 488

Query: 489 SLLPPQDPHLPLTSLVSINADNGHLFALRSLDYEALQGFQFRVGASDHGSPALSSEALVR 548
           SLLPPQDPHLPL SLVSINADNGHLFALRSLDYEALQ F+FRVGA+D GSPALS EALVR
Sbjct: 489 SLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSREALVR 548

Query: 549 VVVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK 608
           V+VLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK
Sbjct: 549 VLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK 608

Query: 609 ATELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQ 668
           ATE GLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLH+LLVDGFSQ
Sbjct: 609 ATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHLLLVDGFSQ 668

Query: 669 PYLPLPEAAPTQAQ--ADLLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRCL 726
           PYLPLPEAAP QAQ  ADLLTVYLVVALASVSSLFL SVLLFVAVRLCRRSRAASVGRC 
Sbjct: 669 PYLPLPEAAPAQAQAEADLLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAASVGRCS 728

Query: 727 VPEGPLPGHLVDMSGTRTLSQSYQYEVCLAGGSGTNEFKFLKPIIPNFPPQCPGKEIQGN 786
           VPEGP PGHLVD+ G  TLSQSYQYEVCL GG GT+EFKFLKP+I +   Q PG++ + N
Sbjct: 729 VPEGPFPGHLVDVRGAETLSQSYQYEVCLTGGPGTSEFKFLKPVISDIQAQGPGRKGEEN 788

Query: 787 STFPNNFGFNIQ 798
           STF N+FGFNIQ
Sbjct: 789 STFRNSFGFNIQ 800


>gi|14195616 protocadherin beta 9 precursor [Homo sapiens]
          Length = 797

 Score = 1143 bits (2956), Expect = 0.0
 Identities = 584/797 (73%), Positives = 662/797 (83%), Gaps = 2/797 (0%)

Query: 1   MEASGKLICRQRQVLFSFLLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREF 60
           M+  G    RQRQVLF FL  G+SLAG+   R YSV EETE  SFV NLAKDLGL + E 
Sbjct: 1   MKTRGFSFPRQRQVLFLFLFWGVSLAGSGFGR-YSVTEETEKGSFVVNLAKDLGLAEGEL 59

Query: 61  SRRGVRVVSRGNKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQA 120
           + RG RVVS  NK +L L+  T +LL NEKLDRE LCG  EPC+L FQ+L++ PF+ ++A
Sbjct: 60  AARGTRVVSDDNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRA 119

Query: 121 ELQVIDINDHSPVFLDKQMLVKVSESSPPGTTFPLKNAEDLDVGQNNIENYIISPNSYFR 180
           EL+V DINDHSPVF  K+M++K+SE++  GT F L+ A+D D G N+I+NY IS NS+F 
Sbjct: 120 ELRVRDINDHSPVFRHKEMVLKISENTAEGTAFRLERAQDPDEGHNSIQNYTISSNSFFH 179

Query: 181 VLTRKRSDGRKYPELVLDKALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVLDVNDNA 240
           +      +G  YPELVLDKALDREE+ EL LTLTALDGGSP RSGT+ + I VLDVNDNA
Sbjct: 180 IKISGSDEGMIYPELVLDKALDREEQEELSLTLTALDGGSPSRSGTSTIRIVVLDVNDNA 239

Query: 241 PEFEQPFYRVQISEDSPVGFLVVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTG 300
           P+F Q  Y  Q  E+SPVG L+VKVSA D D+GVN E+SYS F ASE+I  TF+INP +G
Sbjct: 240 PQFAQALYETQAPENSPVGSLIVKVSAGDADSGVNAEVSYSFFDASEDILTTFQINPFSG 299

Query: 301 EIELKKQLDFEKLQSYEVNIEARDAGTFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPEN 360
           EI L++ LD+E + SY++NI+A D G  S +CTVLI+V+D ND+ PE+ +S+ ++ + EN
Sbjct: 300 EIFLRELLDYELVNSYKINIQAMDGGGLSARCTVLIKVLDSNDNPPELIISSLSNSVAEN 359

Query: 361 APETVVALFSVSDLDSGENGKISCSIQEDLPFLLK-SAENFYTLLTERPLDRESRAEYNI 419
           +P  V+A+F + D DSGENGK  C +Q++LPF LK S +NFY L+TE  LDRES+AEYNI
Sbjct: 360 SPGIVLAVFKIKDRDSGENGKTICYVQDNLPFFLKPSVDNFYILMTEGALDRESKAEYNI 419

Query: 420 TITVTDLGTPMLITQLNMTVLIADVNDNAPAFTQTSYTLFVRENNSPALHIRSVSATDRD 479
           TITVTDLGTP L T+ ++T+ ++DVNDNAPAFTQTSYTLFVRENNSPALHI SVSATDRD
Sbjct: 420 TITVTDLGTPRLKTEHSITLQVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRD 479

Query: 480 SGTNAQVTYSLLPPQDPHLPLTSLVSINADNGHLFALRSLDYEALQGFQFRVGASDHGSP 539
           SGTNAQVTYSLLPPQDPHLPL SLVSINADNGHLFALRSLDYEALQ F FRVGASD GSP
Sbjct: 480 SGTNAQVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFDFRVGASDRGSP 539

Query: 540 ALSSEALVRVVVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN 599
           ALSSEALVRV+VLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN
Sbjct: 540 ALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN 599

Query: 600 AWLSYQLLKATELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLH 659
           AWLSYQLLKATE GLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLH
Sbjct: 600 AWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLH 659

Query: 660 VLLVDGFSQPYLPLPEAAPTQAQADLLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRA 719
           VLLVDGFSQPYLPLPEAAP QAQADLLTVYLVVALASVSSLFL SVLLFVAVRLCRRSRA
Sbjct: 660 VLLVDGFSQPYLPLPEAAPAQAQADLLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRA 719

Query: 720 ASVGRCLVPEGPLPGHLVDMSGTRTLSQSYQYEVCLAGGSGTNEFKFLKPIIPNFPPQCP 779
           ASVGRC VPEGP PGHLVD+SGT TL QSYQYEVCL GGS T EFKFLKPI P+ PP   
Sbjct: 720 ASVGRCSVPEGPFPGHLVDVSGTGTLFQSYQYEVCLTGGSETGEFKFLKPITPHLPPHRG 779

Query: 780 GKEIQGNSTFPNNFGFN 796
           GKEI+ NST PN+FGFN
Sbjct: 780 GKEIEENSTLPNSFGFN 796


>gi|9256604 protocadherin beta 11 precursor [Homo sapiens]
          Length = 797

 Score = 1142 bits (2955), Expect = 0.0
 Identities = 590/797 (74%), Positives = 663/797 (83%), Gaps = 2/797 (0%)

Query: 1   MEASGKLICRQRQVLFSFLLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREF 60
           ME  G    + RQVL  F+LLG+S AG+ E  S+SV EE +  SFV NLAKDLGL+ RE 
Sbjct: 1   MENQGTRTQQIRQVLLLFVLLGMSQAGS-ETWSFSVAEEMQSGSFVGNLAKDLGLKVREL 59

Query: 61  SRRGVRVVSRGNKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQA 120
           S RG RVVS   K  LQL+  T DLLL+E LDRE+LCG  EPCVL  QVL+++P +F Q 
Sbjct: 60  SSRGARVVSNDKKQRLQLDINTGDLLLSETLDREELCGSIEPCVLHLQVLMQNPTQFLQI 119

Query: 121 ELQVIDINDHSPVFLDKQMLVKVSESSPPGTTFPLKNAEDLDVGQNNIENYIISPNSYFR 180
           ELQV DINDHSP+F +KQML+++ E+SP G  F L++A+DLDVG N +++Y ISPNS+F 
Sbjct: 120 ELQVRDINDHSPIFSEKQMLLEIPENSPVGAVFLLESAKDLDVGINAVKSYTISPNSHFH 179

Query: 181 VLTRKRSDGRKYPELVLDKALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVLDVNDNA 240
           +  R   D RKYPELVLDKALD EE  EL   L+ALDGGSPPRSGTA V + V+D+NDN+
Sbjct: 180 IKMRVIPDNRKYPELVLDKALDYEELPELSFILSALDGGSPPRSGTALVRVVVVDINDNS 239

Query: 241 PEFEQPFYRVQISEDSPVGFLVVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTG 300
           PEFEQ FY V+I E+S +G L++ VSA D+D+G NGEI Y+   ASE+I KTF+IN  +G
Sbjct: 240 PEFEQAFYEVKIRENSILGSLILIVSAWDLDSGTNGEICYTFSHASEDIRKTFEINQKSG 299

Query: 301 EIELKKQLDFEKLQSYEVNIEARDAGTFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPEN 360
           EI L+  LDFE ++SY + I+A D G   GK TV+I VIDVND+APE+T+S+ TSPIPEN
Sbjct: 300 EITLRAPLDFETIESYSIIIQATDGGGLFGKSTVIIHVIDVNDNAPEITVSSITSPIPEN 359

Query: 361 APETVVALFSVSDLDSGENGKISCSIQEDLPFLLKSA-ENFYTLLTERPLDRESRAEYNI 419
            PETVV +FS+ D+DSG+NG+I CSI EDLPF+LKS+ EN+YTL TERPLDRES AEYNI
Sbjct: 360 TPETVVMVFSIQDIDSGDNGRIVCSIPEDLPFVLKSSVENYYTLETERPLDRESTAEYNI 419

Query: 420 TITVTDLGTPMLITQLNMTVLIADVNDNAPAFTQTSYTLFVRENNSPALHIRSVSATDRD 479
           TITVTDLG P L T+ N TVL++DVNDNAP FTQTSYTLFVRENNSPALHI SVSATDRD
Sbjct: 420 TITVTDLGIPRLKTEHNTTVLVSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRD 479

Query: 480 SGTNAQVTYSLLPPQDPHLPLTSLVSINADNGHLFALRSLDYEALQGFQFRVGASDHGSP 539
           SGTNAQV YSLLPPQD HLPL SLVSIN DNGHLFALRSLDYEALQ F FRVGA+D GSP
Sbjct: 480 SGTNAQVNYSLLPPQDLHLPLASLVSINTDNGHLFALRSLDYEALQAFDFRVGATDRGSP 539

Query: 540 ALSSEALVRVVVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN 599
           ALSSEALVRV+VLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN
Sbjct: 540 ALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN 599

Query: 600 AWLSYQLLKATELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLH 659
           AWLSYQLLKATE GLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATL 
Sbjct: 600 AWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLQ 659

Query: 660 VLLVDGFSQPYLPLPEAAPTQAQADLLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRA 719
           VLLVDGFSQPYLPLPEAAP QAQAD LTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRA
Sbjct: 660 VLLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRA 719

Query: 720 ASVGRCLVPEGPLPGHLVDMSGTRTLSQSYQYEVCLAGGSGTNEFKFLKPIIPNFPPQCP 779
           ASVG C VP+GP PGHLVD+SGT TLSQSYQYEVCL GGS TNEFKFLKP+IPN   +  
Sbjct: 720 ASVGSCSVPKGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSETNEFKFLKPVIPNIQAKGL 779

Query: 780 GKEIQGNSTFPNNFGFN 796
           GK  + NSTF N+FGFN
Sbjct: 780 GKNSEENSTFRNSFGFN 796


>gi|9256616 protocadherin beta 4 precursor [Homo sapiens]
          Length = 795

 Score = 1139 bits (2946), Expect = 0.0
 Identities = 583/786 (74%), Positives = 657/786 (83%), Gaps = 2/786 (0%)

Query: 12  RQVLFSFLLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREFSRRGVRVVSRG 71
           RQVL   L++ LS     EP  YSV+EETE  SFV +LAKDLGL   E + R  RV+S  
Sbjct: 11  RQVLAFILMVFLSQV-RLEPIRYSVLEETESGSFVAHLAKDLGLGIGELASRSARVLSDD 69

Query: 72  NKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQAELQVIDINDHS 131
           +K  LQL+++T DLLL EKLDRE+LCG  EPCVL FQV LE P +FFQ EL + DINDHS
Sbjct: 70  DKQRLQLDRQTGDLLLREKLDREELCGPIEPCVLHFQVFLEMPVQFFQGELLIQDINDHS 129

Query: 132 PVFLDKQMLVKVSESSPPGTTFPLKNAEDLDVGQNNIENYIISPNSYFRVLTRKRSDGRK 191
           P+F ++++L+K+ E+S PGT FPL  AEDLDVG N ++ Y ISPNS+F +LTR  S+G+K
Sbjct: 130 PIFPEREVLLKILENSQPGTLFPLLIAEDLDVGSNGLQKYTISPNSHFHILTRNHSEGKK 189

Query: 192 YPELVLDKALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVLDVNDNAPEFEQPFYRVQ 251
           YP+LV DK LDREE+ E  LTL ALDGGSPPRSGT  V I ++D+NDNAPEF    Y VQ
Sbjct: 190 YPDLVQDKPLDREEQPEFSLTLVALDGGSPPRSGTVMVRILIMDINDNAPEFVHTPYGVQ 249

Query: 252 ISEDSPVGFLVVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTGEIELKKQLDFE 311
           + E+SP+   +V+V A D+D G  G +SY LFQAS+EI +TF IN +TGEI LKK+LDFE
Sbjct: 250 VLENSPLDSPIVRVLARDIDAGNFGSVSYGLFQASDEIKQTFSINEVTGEILLKKKLDFE 309

Query: 312 KLQSYEVNIEARDAGTFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENAPETVVALFSV 371
           K++SY V IEA D G  SGK TV+I+V+DVND+ PE+ +S+ TS IPENAPETVV++F +
Sbjct: 310 KIKSYHVEIEATDGGGLSGKGTVVIEVVDVNDNPPELIISSLTSSIPENAPETVVSIFRI 369

Query: 372 SDLDSGENGKISCSIQEDLPFLLK-SAENFYTLLTERPLDRESRAEYNITITVTDLGTPM 430
            D DSGENGK+ CSI ++LPF+LK + +NFYTL+TERPLDRE+ AEYNITI VTDLGTP 
Sbjct: 370 RDRDSGENGKMICSIPDNLPFILKPTLKNFYTLVTERPLDRETSAEYNITIAVTDLGTPR 429

Query: 431 LITQLNMTVLIADVNDNAPAFTQTSYTLFVRENNSPALHIRSVSATDRDSGTNAQVTYSL 490
           L TQ N+TV ++DVNDNAPAFTQTSYTLFVRENNSPALHI SVSATDRDSGTNAQVTYSL
Sbjct: 430 LKTQQNITVQVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSL 489

Query: 491 LPPQDPHLPLTSLVSINADNGHLFALRSLDYEALQGFQFRVGASDHGSPALSSEALVRVV 550
           LPPQDPHLPL SLVSINADNGHLFALRSLDYEALQ F+FRVGASD GSPALSSEALVRV+
Sbjct: 490 LPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGASDRGSPALSSEALVRVL 549

Query: 551 VLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKAT 610
           VLD NDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKAT
Sbjct: 550 VLDTNDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKAT 609

Query: 611 ELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQPY 670
           E GLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQPY
Sbjct: 610 EPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQPY 669

Query: 671 LPLPEAAPTQAQADLLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRCLVPEG 730
           LPLPEAAP QAQAD LTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRC VPEG
Sbjct: 670 LPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRCSVPEG 729

Query: 731 PLPGHLVDMSGTRTLSQSYQYEVCLAGGSGTNEFKFLKPIIPNFPPQCPGKEIQGNSTFP 790
           P PGHLVD+SGT TLSQSYQYEVCL G SGT EFKFLKPI PN   Q  G+E++ N  F 
Sbjct: 730 PFPGHLVDVSGTGTLSQSYQYEVCLTGDSGTGEFKFLKPIFPNLLVQDTGREVKENPKFR 789

Query: 791 NNFGFN 796
           N+  F+
Sbjct: 790 NSLVFS 795


>gi|7661662 protocadherin beta 5 precursor [Homo sapiens]
          Length = 795

 Score = 1139 bits (2945), Expect = 0.0
 Identities = 586/788 (74%), Positives = 658/788 (83%), Gaps = 3/788 (0%)

Query: 10  RQRQVLFSFLLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREFSRRGVRVVS 69
           ++RQV+F  +LL L  AG+   R YS+ EETE    V NLAKDLGL   E + RG R+  
Sbjct: 10  QKRQVMFLAILLLLWEAGSEAVR-YSIPEETESGYSVANLAKDLGLGVGELATRGARMHY 68

Query: 70  RGNKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQAELQVIDIND 129
           +GNK  LQL+ +T +LLL EKLDRE +CG TEPC+L FQ+LLE+P +FFQ +LQ+ DIND
Sbjct: 69  KGNKELLQLDIKTGNLLLYEKLDREVMCGATEPCILHFQLLLENPVQFFQTDLQLTDIND 128

Query: 130 HSPVFLDKQMLVKVSESSPPGTTFPLKNAEDLDVGQNNIENYIISPNSYFRVLTRKRSDG 189
           H+P F +K+ML+K+ ES+ PGT FPLK A+D D+G N ++NY ISPNS+F V T  R DG
Sbjct: 129 HAPEFPEKEMLLKIPESTQPGTVFPLKIAQDFDIGSNTVQNYTISPNSHFHVATHNRGDG 188

Query: 190 RKYPELVLDKALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVLDVNDNAPEFEQPFYR 249
           RKYPELVLDKALDREE  EL LTLTALDGG+PPRSGT  + I VLD NDNAPEF Q FY 
Sbjct: 189 RKYPELVLDKALDREERPELSLTLTALDGGAPPRSGTTTIRIVVLDNNDNAPEFLQSFYE 248

Query: 250 VQISEDSPVGFLVVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTGEIELKKQLD 309
           VQ+ E+SP+  LVV VSA D+D G  G ++Y+LFQ  +E+ + F I+  T EI LK+ LD
Sbjct: 249 VQVPENSPLNSLVVVVSARDLDAGAYGSVAYALFQG-DEVTQPFVIDEKTAEIRLKRALD 307

Query: 310 FEKLQSYEVNIEARDAGTFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENAPETVVALF 369
           FE    Y V I A D G  SGKCTV I+V+DVND+APE+TMS  +SP PENAPETVVA+F
Sbjct: 308 FEATPYYNVEIVATDGGGLSGKCTVAIEVVDVNDNAPELTMSTLSSPTPENAPETVVAVF 367

Query: 370 SVSDLDSGENGKISCSIQEDLPFLLK-SAENFYTLLTERPLDRESRAEYNITITVTDLGT 428
           SVSD DSG+NG++ CSIQ DLPFLLK + +NFYTL+T+R LDRES+AEYNITITVTD+GT
Sbjct: 368 SVSDPDSGDNGRMICSIQNDLPFLLKPTLKNFYTLVTQRTLDRESQAEYNITITVTDMGT 427

Query: 429 PMLITQLNMTVLIADVNDNAPAFTQTSYTLFVRENNSPALHIRSVSATDRDSGTNAQVTY 488
           P L T+ N+TVL++DVNDNAPAFTQTSYTLFVRENNSPALHI SVSATDRDSGTNAQVTY
Sbjct: 428 PRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTY 487

Query: 489 SLLPPQDPHLPLTSLVSINADNGHLFALRSLDYEALQGFQFRVGASDHGSPALSSEALVR 548
           SLLPPQ+PHL L SLVSINADNGHLFALRSLDYEALQ F+FRVGA+D GSPALSSEALVR
Sbjct: 488 SLLPPQNPHLRLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSSEALVR 547

Query: 549 VVVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK 608
           V+VLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK
Sbjct: 548 VLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK 607

Query: 609 ATELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQ 668
           ATE GLF +WAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQ
Sbjct: 608 ATEPGLFSMWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQ 667

Query: 669 PYLPLPEAAPTQAQADLLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRCLVP 728
           PYLPLPEAAP QAQAD LTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRC VP
Sbjct: 668 PYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRCSVP 727

Query: 729 EGPLPGHLVDMSGTRTLSQSYQYEVCLAGGSGTNEFKFLKPIIPNFPPQCPGKEIQGNST 788
           EGP PGHLVD+SGT TLSQSY YEVCL G SG  EFKFLKPIIPN  PQ  G+EI   + 
Sbjct: 728 EGPFPGHLVDVSGTGTLSQSYHYEVCLTGDSGAGEFKFLKPIIPNLLPQGAGEEIGKTAA 787

Query: 789 FPNNFGFN 796
           F N+FG N
Sbjct: 788 FRNSFGLN 795


>gi|11036656 protocadherin beta 7 precursor [Homo sapiens]
          Length = 793

 Score = 1123 bits (2905), Expect = 0.0
 Identities = 578/796 (72%), Positives = 655/796 (82%), Gaps = 4/796 (0%)

Query: 1   MEASGKLICRQRQVLFSFLLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREF 60
           MEA  +   ++RQVLF  + LG+S AGA EP  Y V EETE  +F+TNLAKDLGL   E 
Sbjct: 1   MEARVERAVQKRQVLFLCVFLGMSWAGA-EPLRYFVAEETERGTFLTNLAKDLGLGVGEL 59

Query: 61  SRRGVRVVSRGNKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQA 120
             RG R+VS  N   L L+  T DLLLNEKLDRE+LCG  EPCVL FQ+LLE PF+ F+A
Sbjct: 60  RARGTRIVSDQNMQILLLSSLTGDLLLNEKLDREELCGPREPCVLPFQLLLEKPFQIFRA 119

Query: 121 ELQVIDINDHSPVFLDKQMLVKVSESSPPGTTFPLKNAEDLDVGQNNIENYIISPNSYFR 180
           EL V DINDH+PVFLD+++ +K+ ES+ PG  F L++A+D DVG N++ NY ISPN+YF 
Sbjct: 120 ELWVRDINDHAPVFLDREISLKILESTTPGAAFLLESAQDSDVGTNSLSNYTISPNAYFH 179

Query: 181 VLTRKRSDGRKYPELVLDKALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVLDVNDNA 240
           +      +G  YPELVL++ LDREE  E  LTLTALDGGSPPRSGTA V I VLDVNDNA
Sbjct: 180 INVHDSGEGNIYPELVLNQVLDREEIPEFSLTLTALDGGSPPRSGTALVRILVLDVNDNA 239

Query: 241 PEFEQPFYRVQISEDSPVGFLVVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTG 300
           P+F +  Y+VQ+ E+SPVG +VV VSA D+DTG NGEI+Y+   A+E I KTF+INP +G
Sbjct: 240 PDFVRSLYKVQVPENSPVGSMVVSVSARDLDTGSNGEIAYAFSYATERILKTFQINPTSG 299

Query: 301 EIELKKQLDFEKLQSYEVNIEARDAGTFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPEN 360
            + LK QLD+E +Q+Y + I+A+D G  SGKCTV++ V D+ND+ PE+ +S+ TSPI EN
Sbjct: 300 SLHLKAQLDYEAIQTYTLTIQAKDGGGLSGKCTVVVDVTDINDNRPELLLSSLTSPIAEN 359

Query: 361 APETVVALFSVSDLDSGENGKISCSIQEDLPFLLK-SAENFYTLLTERPLDRESRAEYNI 419
           +PETVVA+F + D DSG NGK  CSIQ+D+PF+LK S ENFYTL+TE+PLDRE   EYNI
Sbjct: 360 SPETVVAVFRIRDRDSGNNGKTVCSIQDDVPFILKPSVENFYTLVTEKPLDRERNTEYNI 419

Query: 420 TITVTDLGTPMLITQLNMTVLIADVNDNAPAFTQTSYTLFVRENNSPALHIRSVSATDRD 479
           TITVTDLGTP L T+ N+TVL++DVNDNAPAFTQTSYTLFVRENNSPAL I SVSATDRD
Sbjct: 420 TITVTDLGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALPIGSVSATDRD 479

Query: 480 SGTNAQVTYSLLPPQDPHLPLTSLVSINADNGHLFALRSLDYEALQGFQFRVGASDHGSP 539
           SGTNAQV YSLLP QDPHLPL SLVSINADNGHLFALRSLDYEALQ F+FRVGA+D GSP
Sbjct: 480 SGTNAQVIYSLLPSQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSP 539

Query: 540 ALSSEALVRVVVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN 599
           ALSSEALVRV+VLDANDNSPFVLYPLQN SAPCTE +PRAAEPGYLVTKVVAVDGDSGQN
Sbjct: 540 ALSSEALVRVLVLDANDNSPFVLYPLQNSSAPCTEPLPRAAEPGYLVTKVVAVDGDSGQN 599

Query: 600 AWLSYQLLKATELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLH 659
           AWLSYQLLKATE GLFGVWAHNGEVRTARLLSERDAAK RLVVLVKDNGEPPRSATATLH
Sbjct: 600 AWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLH 659

Query: 660 VLLVDGFSQPYLPLPEAAPTQAQADLLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRA 719
           VLLVDGFSQPYL LPEAAP QA +  LTVYLVVALASVSSLFL SVLLFVAVRLCRRSRA
Sbjct: 660 VLLVDGFSQPYLRLPEAAPDQANS--LTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRA 717

Query: 720 ASVGRCLVPEGPLPGHLVDMSGTRTLSQSYQYEVCLAGGSGTNEFKFLKPIIPNFPPQCP 779
           A VGRC VPEGP P HLVD+SGT TLSQSYQYEVCL GGSGTNEFKFLKPIIPN  PQ  
Sbjct: 718 APVGRCSVPEGPFPRHLVDLSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNLLPQST 777

Query: 780 GKEIQGNSTFPNNFGF 795
           G+E++ N  F NN GF
Sbjct: 778 GREVEENRPFQNNLGF 793


>gi|14195607 protocadherin beta 1 precursor [Homo sapiens]
          Length = 818

 Score =  781 bits (2018), Expect = 0.0
 Identities = 403/790 (51%), Positives = 557/790 (70%), Gaps = 8/790 (1%)

Query: 10  RQRQVLFSFLLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREFSRRGVRVVS 69
           + RQV    + L +S+  A   R YSV EE E  SFV N+AKDLGLE  + + RG R+VS
Sbjct: 10  QNRQVGSLLIFLCISVGDATTIR-YSVAEEMESGSFVANVAKDLGLEVGKLAARGARLVS 68

Query: 70  RGNKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQAELQVIDIND 129
            GNK+H +L+++T DL + EKLDRE LCG  +PCVL F+V+L  P + F+AE++V DIND
Sbjct: 69  EGNKMHFRLHRKTGDLFVKEKLDRESLCGKADPCVLHFEVVLVEPLQSFRAEVRVFDIND 128

Query: 130 HSPVFLDKQMLVKVSESSPPGTTFPLKNAEDLDVGQNNIENYIISPNSYFRVLTRKRSDG 189
           ++PVFL+K+ L+K+ ES+P G+ FPL++A+DLDVG N ++NY +S N YF + TR  S G
Sbjct: 129 NAPVFLNKEPLLKIPESTPLGSRFPLQSAQDLDVGLNGLQNYTLSANGYFHLHTRFCSHG 188

Query: 190 RKYPELVLDKALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVLDVNDNAPEFEQPFYR 249
            KY ELVL+K LDREE+ E+ LT+TA+DGGSPP+SGTA +++ VLDVND+ P+F +  YR
Sbjct: 189 PKYAELVLNKPLDREEQPEVNLTITAVDGGSPPKSGTAHIHVVVLDVNDHVPQFSRLVYR 248

Query: 250 VQISEDSPVGFLVVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTGEIELKKQLD 309
            Q+SE+SP G LV  V+A D+D G N  I+YSL Q  E I KTF+I+P  GE+ L+  LD
Sbjct: 249 AQVSENSPNGSLVATVTAVDLDEGTNKAITYSLAQNPEAILKTFQIDPQNGEVRLRGPLD 308

Query: 310 FEKLQSYEVNIEARDAGTFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENA-PETVVAL 368
           FE +++Y+++I+A D G  S    VL++V+DVND+ PEV +S+ +SP+PE++ P+TVVAL
Sbjct: 309 FEAIETYDIDIQATDGGGLSAHSKVLVEVVDVNDNPPEVMVSSVSSPLPEDSPPQTVVAL 368

Query: 369 FSVSDLDSGENGKISCSIQEDLPFLLK-SAENFYTLLTERPLDRESRAEYNITITVTDLG 427
           F++ D D    GK++C ++EDLPF++K +  N Y+L+T+R LDRE  + YNITI   D G
Sbjct: 369 FTIRDRDIRVGGKVTCFLREDLPFVIKPTFGNSYSLVTDRSLDREEVSGYNITIVAMDTG 428

Query: 428 TPMLITQLNMTVLIADVNDNAPAFTQTSYTLFVRENNSPALHIRSVSATDRDSGTNAQVT 487
            P L  +  + VLI+DVNDN P F + SY L VRENNSPA+ I  V A D D G NAQ+T
Sbjct: 429 PPSLSAETMIEVLISDVNDNPPIFREDSYILTVRENNSPAVFIGKVHAEDLDLGENAQIT 488

Query: 488 YSLLPPQDPHLPLTSLVSINADNGHLFALRSLDYEALQGFQFRVGASDHGSPALSSEALV 547
           YSLLPP++  L + + +SIN+ NG L+ALR++DYEA+Q FQF V A+D G  +LSS+  V
Sbjct: 489 YSLLPPKNGDLSVFAYISINSGNGKLYALRTMDYEAIQDFQFVVKATDGGFLSLSSQVTV 548

Query: 548 RVVVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLL 607
           RVVVLD NDN P +LYPLQNG+ PC +LVPR+AE GYLVTKVVAVDGDSGQN+WLSY LL
Sbjct: 549 RVVVLDDNDNRPMILYPLQNGTLPCNDLVPRSAEAGYLVTKVVAVDGDSGQNSWLSYHLL 608

Query: 608 KATELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFS 667
           KAT+LGLF V   NGE+ T R +SERD    +L++LV+D+G+P  S T +L++LLVDGFS
Sbjct: 609 KATDLGLFSVQRQNGEIHTLRQISERDPMMQKLIILVQDHGQPALSTTVSLNILLVDGFS 668

Query: 668 QPYLPLPEAAPTQAQADLLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSR---AASVGR 724
           +PYL   +      + +  T YLV++L  +S LFL SV++   + + ++ +     ++  
Sbjct: 669 EPYLQFQDPTKHSRKVNPSTKYLVISLVILSFLFLLSVIVIFIIHVYQKIKYREKFTIQE 728

Query: 725 CLVPEGPLPGHLVDMSGTRTLSQSYQYEVCLAGGSGTNEFKFLKPIIPNFP-PQCPGK-E 782
               +     +LV   G  +LS+   YE+C A G+G +EF+FLK  +PNFP P   G+ +
Sbjct: 729 HFYDDCNFSNNLVQGQGNGSLSRPCPYEMCSATGTGNSEFRFLKRFMPNFPFPHATGEIK 788

Query: 783 IQGNSTFPNN 792
           ++  S+ P N
Sbjct: 789 MEAGSSLPPN 798


>gi|11056065 protocadherin gamma subfamily A, 6 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score =  647 bits (1668), Expect = 0.0
 Identities = 365/765 (47%), Positives = 482/765 (63%), Gaps = 6/765 (0%)

Query: 10  RQRQVLFSFLLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREFSRRGVRVVS 69
           R  QVL   LL  L  A AA+ R YS+ EE E  SFV N+ KDLGLE +E +  GVR+VS
Sbjct: 10  RSEQVLLLTLLGTLWGAAAAQIR-YSIPEELEKGSFVGNIVKDLGLEPQELAEHGVRIVS 68

Query: 70  RGNKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQAELQVIDIND 129
           RG      LN     L+   ++DRE+LC  +  C++ F +L+E     +  E++++DIND
Sbjct: 69  RGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVEVEIVDIND 128

Query: 130 HSPVFLDKQMLVKVSESSPPGTTFPLKNAEDLDVGQNNIENYIISPNSYFRVLTRKRSDG 189
           ++P FL +++ VK+ E++ P + FPL    D DVG N+++ + +S NS+F V  +  + G
Sbjct: 129 NTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSVDVQSEAHG 188

Query: 190 RKYPELVLDKALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVLDVNDNAPEFEQPFYR 249
            KYPELVL+  LDRE EA  RL LTA+DGG P RS  AQ+ + VLDVNDN P F QP YR
Sbjct: 189 PKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTPMFTQPVYR 248

Query: 250 VQISEDSPVGFLVVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTGEIELKKQLD 309
           V + E+ PVG  V+ V+ATD D GV+GE++YS  + +E+I + F +N LTGEI     LD
Sbjct: 249 VSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGEISTSANLD 308

Query: 310 FEKLQSYEVNIEARDAGTFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENAPE-TVVAL 368
           +E    YE+ +EARD      +  VLI ++DVND+ PEV +++ +  I E+AP  TV+AL
Sbjct: 309 YEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESAPPGTVIAL 368

Query: 369 FSVSDLDSGENGKISCSIQEDLPF-LLKSAENFYTLLTERPLDRESRAEYNITITVTDLG 427
           F V D DSG NG ++CSI   LPF L KS  N+Y L+T   LDRE    YNIT+T TD G
Sbjct: 369 FQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNITVTATDKG 428

Query: 428 TPMLITQLNMTVLIADVNDNAPAFTQTSYTLFVRENNSPALHIRSVSATDRDSGTNAQVT 487
           TP L T+  +++ +AD NDN P F  +SY+++V ENN     I SV+A D D   NAQV+
Sbjct: 429 TPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPDVDQNAQVS 488

Query: 488 YSLLPPQDPHLPLTSLVSINADNGHLFALRSLDYEALQGFQFRVGASDHGSPALSSEALV 547
           YSL        PL+S VSIN+D G L+ALRS DYE L+  Q  V ASD G P LSS   +
Sbjct: 489 YSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDPPLSSNVSL 548

Query: 548 RVVVLDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQL 606
            + VLD NDN+P +LYP L    +   EL PR+AEPGYLVTKVVAVD DSGQNAWLSY+L
Sbjct: 549 SLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRL 608

Query: 607 LKATELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGF 666
           LKA+E GLF V  H GEVRTAR L +RDA K  LVV V+D+G+PP SAT TL V + D  
Sbjct: 609 LKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRI 668

Query: 667 SQPYLPLPEAAPTQAQADL-LTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRC 725
                 L    P+    D  LT+YLVVA+A+VS +FL  V++ +A+RL R  ++  +   
Sbjct: 669 PDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWHKSRLLQAS 728

Query: 726 LVPEGPLPG-HLVDMSGTRTLSQSYQYEVCLAGGSGTNEFKFLKP 769
                 +PG H V + G R   Q+Y +EV L   S  +   F +P
Sbjct: 729 GGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQP 773


>gi|14196474 protocadherin gamma subfamily A, 6 isoform 2 precursor
           [Homo sapiens]
          Length = 818

 Score =  647 bits (1668), Expect = 0.0
 Identities = 365/765 (47%), Positives = 482/765 (63%), Gaps = 6/765 (0%)

Query: 10  RQRQVLFSFLLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREFSRRGVRVVS 69
           R  QVL   LL  L  A AA+ R YS+ EE E  SFV N+ KDLGLE +E +  GVR+VS
Sbjct: 10  RSEQVLLLTLLGTLWGAAAAQIR-YSIPEELEKGSFVGNIVKDLGLEPQELAEHGVRIVS 68

Query: 70  RGNKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQAELQVIDIND 129
           RG      LN     L+   ++DRE+LC  +  C++ F +L+E     +  E++++DIND
Sbjct: 69  RGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVEVEIVDIND 128

Query: 130 HSPVFLDKQMLVKVSESSPPGTTFPLKNAEDLDVGQNNIENYIISPNSYFRVLTRKRSDG 189
           ++P FL +++ VK+ E++ P + FPL    D DVG N+++ + +S NS+F V  +  + G
Sbjct: 129 NTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSVDVQSEAHG 188

Query: 190 RKYPELVLDKALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVLDVNDNAPEFEQPFYR 249
            KYPELVL+  LDRE EA  RL LTA+DGG P RS  AQ+ + VLDVNDN P F QP YR
Sbjct: 189 PKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTPMFTQPVYR 248

Query: 250 VQISEDSPVGFLVVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTGEIELKKQLD 309
           V + E+ PVG  V+ V+ATD D GV+GE++YS  + +E+I + F +N LTGEI     LD
Sbjct: 249 VSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGEISTSANLD 308

Query: 310 FEKLQSYEVNIEARDAGTFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENAPE-TVVAL 368
           +E    YE+ +EARD      +  VLI ++DVND+ PEV +++ +  I E+AP  TV+AL
Sbjct: 309 YEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESAPPGTVIAL 368

Query: 369 FSVSDLDSGENGKISCSIQEDLPF-LLKSAENFYTLLTERPLDRESRAEYNITITVTDLG 427
           F V D DSG NG ++CSI   LPF L KS  N+Y L+T   LDRE    YNIT+T TD G
Sbjct: 369 FQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNITVTATDKG 428

Query: 428 TPMLITQLNMTVLIADVNDNAPAFTQTSYTLFVRENNSPALHIRSVSATDRDSGTNAQVT 487
           TP L T+  +++ +AD NDN P F  +SY+++V ENN     I SV+A D D   NAQV+
Sbjct: 429 TPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPDVDQNAQVS 488

Query: 488 YSLLPPQDPHLPLTSLVSINADNGHLFALRSLDYEALQGFQFRVGASDHGSPALSSEALV 547
           YSL        PL+S VSIN+D G L+ALRS DYE L+  Q  V ASD G P LSS   +
Sbjct: 489 YSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDPPLSSNVSL 548

Query: 548 RVVVLDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQL 606
            + VLD NDN+P +LYP L    +   EL PR+AEPGYLVTKVVAVD DSGQNAWLSY+L
Sbjct: 549 SLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRL 608

Query: 607 LKATELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGF 666
           LKA+E GLF V  H GEVRTAR L +RDA K  LVV V+D+G+PP SAT TL V + D  
Sbjct: 609 LKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRI 668

Query: 667 SQPYLPLPEAAPTQAQADL-LTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRC 725
                 L    P+    D  LT+YLVVA+A+VS +FL  V++ +A+RL R  ++  +   
Sbjct: 669 PDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWHKSRLLQAS 728

Query: 726 LVPEGPLPG-HLVDMSGTRTLSQSYQYEVCLAGGSGTNEFKFLKP 769
                 +PG H V + G R   Q+Y +EV L   S  +   F +P
Sbjct: 729 GGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQP 773


>gi|11056063 protocadherin gamma subfamily A, 7 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score =  647 bits (1668), Expect = 0.0
 Identities = 357/760 (46%), Positives = 489/760 (64%), Gaps = 13/760 (1%)

Query: 19  LLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREFSRRGVRVVSRGNKLHLQL 78
           +LLG      A    YSV EET+  SFV ++AKDLGLE RE + RGVR++SRG      L
Sbjct: 18  ILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAERGVRIISRGRTQLFAL 77

Query: 79  NQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQAELQVIDINDHSPVFLDKQ 138
           NQ +  L+   ++DRE++C  +  C++ F +L+E     +  ++++IDIND+ P FL ++
Sbjct: 78  NQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVEIIDINDNVPRFLTEE 137

Query: 139 MLVKVSESSPPGTTFPLKNAEDLDVGQNNIENYIISPNSYFRVLTRKRSDGRKYPELVLD 198
           + VK+ E++ PG  FPL  A D DVG N++++Y +SPN +F +  +   D  KYPELVL+
Sbjct: 138 INVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSGDDETKYPELVLE 197

Query: 199 KALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVLDVNDNAPEFEQPFYRVQISEDSPV 258
           + LDREEE    L LTA DGG PPRS TA + + V+DVND+ P F  P Y+V + E+ PV
Sbjct: 198 RVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLPQYQVTVPENVPV 257

Query: 259 GFLVVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTGEIELKKQLDFEKLQSYEV 318
           G  ++ V A D+D GVNGE++YS  + + ++ K F +N LTGEI   + LD+E+   YE+
Sbjct: 258 GTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEISTLEGLDYEETAFYEM 317

Query: 319 NIEARDAGTFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENAP-ETVVALFSVSDLDSG 377
            ++A+D      K  VLI V+DVND+APEVTM++ +S IPE+ P  TV+ALF + D DSG
Sbjct: 318 EVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTVIALFYLQDRDSG 377

Query: 378 ENGKISCSIQEDLPFLL-KSAENFYTLLTERPLDRESRAEYNITITVTDLGTPMLITQLN 436
           +NG+++C+I E+LPF L KS +N+Y L+T + LDRE+ + YNIT+  TD GTP L  + +
Sbjct: 378 KNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGGTPPLSRETH 437

Query: 437 MTVLIADVNDNAPAFTQTSYTLFVRENNSPALHIRSVSATDRDSGTNAQVTYSLLPPQDP 496
           + + +AD NDN P F  +SY++++ ENN     I  V+A D DS  NAQ+TYSL      
Sbjct: 438 IFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQITYSLAEDTIQ 497

Query: 497 HLPLTSLVSINADNGHLFALRSLDYEALQGFQFRVGASDHGSPALSSEALVRVVVLDAND 556
             P++S VSIN+D G L+AL+S DYE L+  Q RV A D G P LSS   + + VLD ND
Sbjct: 498 GAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPLSSNMSLSLFVLDQND 557

Query: 557 NSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATELGLF 615
           N P +LYP L    +   EL PR+AEPGYLVTKVVAVD DSGQNAWLSY LLKA+E GLF
Sbjct: 558 NPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLLLKASEPGLF 617

Query: 616 GVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQPYLPLPE 675
            V  + GEVRTAR L +RDA K  LVV V+D+G+PP SAT TL V + D   +    L  
Sbjct: 618 AVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVLADLGS 677

Query: 676 AAPTQAQADL-LTVYLVVALASVSSLFLFSVLLFVAVRLCR--RSR---AASVGRCLVPE 729
             P+    +  LT+YLVVA+A+VS +FL  VL+ +A+RL R  +SR   A+  G   VP 
Sbjct: 678 LEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKSRLLQASEGGLANVP- 736

Query: 730 GPLPGHLVDMSGTRTLSQSYQYEVCLAGGSGTNEFKFLKP 769
                H V M G +   Q+Y +EV L   S  +   F +P
Sbjct: 737 ---TSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQP 773


>gi|14196477 protocadherin gamma subfamily A, 7 isoform 2 precursor
           [Homo sapiens]
          Length = 817

 Score =  647 bits (1668), Expect = 0.0
 Identities = 357/760 (46%), Positives = 489/760 (64%), Gaps = 13/760 (1%)

Query: 19  LLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREFSRRGVRVVSRGNKLHLQL 78
           +LLG      A    YSV EET+  SFV ++AKDLGLE RE + RGVR++SRG      L
Sbjct: 18  ILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAERGVRIISRGRTQLFAL 77

Query: 79  NQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQAELQVIDINDHSPVFLDKQ 138
           NQ +  L+   ++DRE++C  +  C++ F +L+E     +  ++++IDIND+ P FL ++
Sbjct: 78  NQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVEIIDINDNVPRFLTEE 137

Query: 139 MLVKVSESSPPGTTFPLKNAEDLDVGQNNIENYIISPNSYFRVLTRKRSDGRKYPELVLD 198
           + VK+ E++ PG  FPL  A D DVG N++++Y +SPN +F +  +   D  KYPELVL+
Sbjct: 138 INVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSGDDETKYPELVLE 197

Query: 199 KALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVLDVNDNAPEFEQPFYRVQISEDSPV 258
           + LDREEE    L LTA DGG PPRS TA + + V+DVND+ P F  P Y+V + E+ PV
Sbjct: 198 RVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLPQYQVTVPENVPV 257

Query: 259 GFLVVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTGEIELKKQLDFEKLQSYEV 318
           G  ++ V A D+D GVNGE++YS  + + ++ K F +N LTGEI   + LD+E+   YE+
Sbjct: 258 GTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEISTLEGLDYEETAFYEM 317

Query: 319 NIEARDAGTFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENAP-ETVVALFSVSDLDSG 377
            ++A+D      K  VLI V+DVND+APEVTM++ +S IPE+ P  TV+ALF + D DSG
Sbjct: 318 EVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTVIALFYLQDRDSG 377

Query: 378 ENGKISCSIQEDLPFLL-KSAENFYTLLTERPLDRESRAEYNITITVTDLGTPMLITQLN 436
           +NG+++C+I E+LPF L KS +N+Y L+T + LDRE+ + YNIT+  TD GTP L  + +
Sbjct: 378 KNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGGTPPLSRETH 437

Query: 437 MTVLIADVNDNAPAFTQTSYTLFVRENNSPALHIRSVSATDRDSGTNAQVTYSLLPPQDP 496
           + + +AD NDN P F  +SY++++ ENN     I  V+A D DS  NAQ+TYSL      
Sbjct: 438 IFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQITYSLAEDTIQ 497

Query: 497 HLPLTSLVSINADNGHLFALRSLDYEALQGFQFRVGASDHGSPALSSEALVRVVVLDAND 556
             P++S VSIN+D G L+AL+S DYE L+  Q RV A D G P LSS   + + VLD ND
Sbjct: 498 GAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPLSSNMSLSLFVLDQND 557

Query: 557 NSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATELGLF 615
           N P +LYP L    +   EL PR+AEPGYLVTKVVAVD DSGQNAWLSY LLKA+E GLF
Sbjct: 558 NPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLLLKASEPGLF 617

Query: 616 GVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQPYLPLPE 675
            V  + GEVRTAR L +RDA K  LVV V+D+G+PP SAT TL V + D   +    L  
Sbjct: 618 AVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVLADLGS 677

Query: 676 AAPTQAQADL-LTVYLVVALASVSSLFLFSVLLFVAVRLCR--RSR---AASVGRCLVPE 729
             P+    +  LT+YLVVA+A+VS +FL  VL+ +A+RL R  +SR   A+  G   VP 
Sbjct: 678 LEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKSRLLQASEGGLANVP- 736

Query: 730 GPLPGHLVDMSGTRTLSQSYQYEVCLAGGSGTNEFKFLKP 769
                H V M G +   Q+Y +EV L   S  +   F +P
Sbjct: 737 ---TSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQP 773


>gi|11128041 protocadherin gamma subfamily A, 10 isoform 1 precursor
           [Homo sapiens]
          Length = 936

 Score =  642 bits (1657), Expect = 0.0
 Identities = 358/759 (47%), Positives = 481/759 (63%), Gaps = 11/759 (1%)

Query: 19  LLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREFSRRGVRVVSRGNKLHLQL 78
           L  G+     A   SYS+ EE E  SFV N++KDLGL  RE + RGVR+VSRG      L
Sbjct: 22  LFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVSRGRTQLFSL 81

Query: 79  NQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQAELQVIDINDHSPVFLDKQ 138
           N  +  L+   ++DRE+LC  +  CV+ F +L+E   + F  E++V DIND++P F  + 
Sbjct: 82  NPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDINDNAPKFQAEN 141

Query: 139 MLVKVSESSPPGTTFPLKNAEDLDVGQNNIENYIISPNSYFRVLTRKRSDGRKYPELVLD 198
           + VK++E+   G  FPL  A D DVG N++++Y +SPN +F +  + R++G KYPELVL+
Sbjct: 142 LDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANGVKYPELVLE 201

Query: 199 KALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVLDVNDNAPEFEQPFYRVQISEDSPV 258
            +LDREEEA   L LTA DGG P RSGT  V + V D NDNAP F  P YRV + E+ PV
Sbjct: 202 HSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYRVSVPENLPV 261

Query: 259 GFLVVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTGEIELKKQLDFEKLQSYEV 318
           G  ++ V+ATD D G NGE++YS  +  +     F++N  TGEI++ + LD+E+   YE+
Sbjct: 262 GTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLDYEETGFYEI 321

Query: 319 NIEARDAGTFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENAP-ETVVALFSVSDLDSG 377
            I+A D G +     VLI V DVND++PE+T+++  SP+ E++P  TVVAL +V DLDS 
Sbjct: 322 EIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVALLNVHDLDSE 381

Query: 378 ENGKISCSIQEDLPFLL-KSAENFYTLLTERPLDRESRAEYNITITVTDLGTPMLITQLN 436
           +NG+++CSI   LPF L KS +++Y L+  R LDRE  + YNIT+T TD G+P L T+ +
Sbjct: 382 QNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGGSPPLSTEAH 441

Query: 437 MTVLIADVNDNAPAFTQTSYTLFVRENNSPALHIRSVSATDRDSGTNAQVTYSLLPPQDP 496
             + +AD+NDN P F+Q SY  ++ ENN+    I SV+A D DS  NAQ+ YSL      
Sbjct: 442 FMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQIIYSLAEDTIQ 501

Query: 497 HLPLTSLVSINADNGHLFALRSLDYEALQGFQFRVGASDHGSPALSSEALVRVVVLDAND 556
            +PL+S +SIN+D G L+ALRS DYE     Q +V ASD G P LSS   + + VLD ND
Sbjct: 502 GVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSLSLFVLDQND 561

Query: 557 NSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATELGLF 615
           N+P +LYP L    +   EL PR+AEPGYLVTKVVAVD DSGQNAWLSY+LLKA+E GLF
Sbjct: 562 NAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLF 621

Query: 616 GVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQPYLPLPE 675
            V  H GEVRTAR L +RDA K  LVV V+D+G+PP SAT TL V + D   Q    L  
Sbjct: 622 AVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVLADLGS 681

Query: 676 -AAPTQAQADLLTVYLVVALASVSSLFLFSVLLFVAVRLCR----RSRAASVGRCLVPEG 730
             +P  ++   LT+YLVVA+A+VS +FL  V++ +A RL R    R   AS G      G
Sbjct: 682 FESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGGLTGVSG 741

Query: 731 PLPGHLVDMSGTRTLSQSYQYEVCLAGGSGTNEFKFLKP 769
               H V + G R   Q+Y +EV L   S  +   F +P
Sbjct: 742 ---SHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQP 777


>gi|14196448 protocadherin gamma subfamily A, 10 isoform 2 precursor
           [Homo sapiens]
          Length = 850

 Score =  642 bits (1657), Expect = 0.0
 Identities = 358/759 (47%), Positives = 481/759 (63%), Gaps = 11/759 (1%)

Query: 19  LLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREFSRRGVRVVSRGNKLHLQL 78
           L  G+     A   SYS+ EE E  SFV N++KDLGL  RE + RGVR+VSRG      L
Sbjct: 22  LFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVSRGRTQLFSL 81

Query: 79  NQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQAELQVIDINDHSPVFLDKQ 138
           N  +  L+   ++DRE+LC  +  CV+ F +L+E   + F  E++V DIND++P F  + 
Sbjct: 82  NPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDINDNAPKFQAEN 141

Query: 139 MLVKVSESSPPGTTFPLKNAEDLDVGQNNIENYIISPNSYFRVLTRKRSDGRKYPELVLD 198
           + VK++E+   G  FPL  A D DVG N++++Y +SPN +F +  + R++G KYPELVL+
Sbjct: 142 LDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANGVKYPELVLE 201

Query: 199 KALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVLDVNDNAPEFEQPFYRVQISEDSPV 258
            +LDREEEA   L LTA DGG P RSGT  V + V D NDNAP F  P YRV + E+ PV
Sbjct: 202 HSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYRVSVPENLPV 261

Query: 259 GFLVVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTGEIELKKQLDFEKLQSYEV 318
           G  ++ V+ATD D G NGE++YS  +  +     F++N  TGEI++ + LD+E+   YE+
Sbjct: 262 GTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLDYEETGFYEI 321

Query: 319 NIEARDAGTFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENAP-ETVVALFSVSDLDSG 377
            I+A D G +     VLI V DVND++PE+T+++  SP+ E++P  TVVAL +V DLDS 
Sbjct: 322 EIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVALLNVHDLDSE 381

Query: 378 ENGKISCSIQEDLPFLL-KSAENFYTLLTERPLDRESRAEYNITITVTDLGTPMLITQLN 436
           +NG+++CSI   LPF L KS +++Y L+  R LDRE  + YNIT+T TD G+P L T+ +
Sbjct: 382 QNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGGSPPLSTEAH 441

Query: 437 MTVLIADVNDNAPAFTQTSYTLFVRENNSPALHIRSVSATDRDSGTNAQVTYSLLPPQDP 496
             + +AD+NDN P F+Q SY  ++ ENN+    I SV+A D DS  NAQ+ YSL      
Sbjct: 442 FMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQIIYSLAEDTIQ 501

Query: 497 HLPLTSLVSINADNGHLFALRSLDYEALQGFQFRVGASDHGSPALSSEALVRVVVLDAND 556
            +PL+S +SIN+D G L+ALRS DYE     Q +V ASD G P LSS   + + VLD ND
Sbjct: 502 GVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSLSLFVLDQND 561

Query: 557 NSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATELGLF 615
           N+P +LYP L    +   EL PR+AEPGYLVTKVVAVD DSGQNAWLSY+LLKA+E GLF
Sbjct: 562 NAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLF 621

Query: 616 GVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQPYLPLPE 675
            V  H GEVRTAR L +RDA K  LVV V+D+G+PP SAT TL V + D   Q    L  
Sbjct: 622 AVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVLADLGS 681

Query: 676 -AAPTQAQADLLTVYLVVALASVSSLFLFSVLLFVAVRLCR----RSRAASVGRCLVPEG 730
             +P  ++   LT+YLVVA+A+VS +FL  V++ +A RL R    R   AS G      G
Sbjct: 682 FESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGGLTGVSG 741

Query: 731 PLPGHLVDMSGTRTLSQSYQYEVCLAGGSGTNEFKFLKP 769
               H V + G R   Q+Y +EV L   S  +   F +P
Sbjct: 742 ---SHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQP 777


>gi|11056032 protocadherin gamma subfamily A, 1 isoform 1 precursor
           [Homo sapiens]
          Length = 931

 Score =  641 bits (1653), Expect = 0.0
 Identities = 349/756 (46%), Positives = 483/756 (63%), Gaps = 5/756 (0%)

Query: 19  LLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREFSRRGVRVVSRGNKLHLQL 78
           L L L L   A    YSV EET+  SFV N+AKDLGL+ +E +  GVR+VSRG      L
Sbjct: 18  LSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGVRIVSRGRMPLFAL 77

Query: 79  NQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQAELQVIDINDHSPVFLDKQ 138
           N  +  L+   ++DRE+LC  + PC++ F +L+E   + F  E+++IDIND++P F  ++
Sbjct: 78  NPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEIIDINDNTPQFQLEE 137

Query: 139 MLVKVSESSPPGTTFPLKNAEDLDVGQNNIENYIISPNSYFRVLTRKRSDGRKYPELVLD 198
           +  K++E + PGT   L   +DLDVG N++++Y +S N +F +  ++ +DG ++PE+VL 
Sbjct: 138 LEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQGADGPQHPEMVLQ 197

Query: 199 KALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVLDVNDNAPEFEQPFYRVQISEDSPV 258
             LDREEEA   L LTA DGG P RSGT ++YI+V+D NDN P F Q  Y + + E+ P+
Sbjct: 198 SPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQAQYHINVPENVPL 257

Query: 259 GFLVVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTGEIELKKQLDFEKLQSYEV 318
           G  ++ V+ATD D G NGE++YS       + + F+++  TGEI  K+ LDFE+ + Y +
Sbjct: 258 GTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNKEPLDFEEYKMYSM 317

Query: 319 NIEARDAGTFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPEN-APETVVALFSVSDLDSG 377
            ++A+D      K  VLI+V+DVND+APEVT+++ T+ +PEN  P T++AL SV D DSG
Sbjct: 318 EVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGTIIALISVHDQDSG 377

Query: 378 ENGKISCSIQEDLPFLL-KSAENFYTLLTERPLDRESRAEYNITITVTDLGTPMLITQLN 436
           +NG  +C I  +LPF L K  +N+Y L+TER LDRE  + YNITIT  D GTP L T+ +
Sbjct: 378 DNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITAIDQGTPALSTETH 437

Query: 437 MTVLIADVNDNAPAFTQTSYTLFVRENNSPALHIRSVSATDRDSGTNAQVTYSLLPPQDP 496
           +++L+ D+NDN+P F Q SY+ ++ ENN     I SV A D DS  NAQ+TYSL+     
Sbjct: 438 ISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNENAQITYSLIEDTIQ 497

Query: 497 HLPLTSLVSINADNGHLFALRSLDYEALQGFQFRVGASDHGSPALSSEALVRVVVLDAND 556
             PL++ +SIN+D G L+ALRS DYE  +  Q +V A D G P LSS   + + +LD ND
Sbjct: 498 GAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSSNVSLSLFLLDQND 557

Query: 557 NSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATELGLF 615
           N+P +LYP L    +   EL P +AEPGYLVTKVVAVD DSGQNAWLSY+LLKA+E GLF
Sbjct: 558 NAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLF 617

Query: 616 GVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQPYLPLPE 675
            V  H GEVRTAR L +RDA K  LVV V+D+G+PP SAT TL V + D  S     L  
Sbjct: 618 SVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRISDILADLGS 677

Query: 676 AAPTQAQADL-LTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRCLVPEGPLPG 734
             P+    D  LT+YLVVA A+VS +FL  V++ +A RL R  ++  +         +PG
Sbjct: 678 LEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGGLASMPG 737

Query: 735 -HLVDMSGTRTLSQSYQYEVCLAGGSGTNEFKFLKP 769
            H V + G R   Q+Y +EV L   S  +   F +P
Sbjct: 738 SHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQP 773


>gi|14196459 protocadherin gamma subfamily A, 1 isoform 2 precursor
           [Homo sapiens]
          Length = 823

 Score =  641 bits (1653), Expect = 0.0
 Identities = 349/756 (46%), Positives = 483/756 (63%), Gaps = 5/756 (0%)

Query: 19  LLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREFSRRGVRVVSRGNKLHLQL 78
           L L L L   A    YSV EET+  SFV N+AKDLGL+ +E +  GVR+VSRG      L
Sbjct: 18  LSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGVRIVSRGRMPLFAL 77

Query: 79  NQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQAELQVIDINDHSPVFLDKQ 138
           N  +  L+   ++DRE+LC  + PC++ F +L+E   + F  E+++IDIND++P F  ++
Sbjct: 78  NPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEIIDINDNTPQFQLEE 137

Query: 139 MLVKVSESSPPGTTFPLKNAEDLDVGQNNIENYIISPNSYFRVLTRKRSDGRKYPELVLD 198
           +  K++E + PGT   L   +DLDVG N++++Y +S N +F +  ++ +DG ++PE+VL 
Sbjct: 138 LEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQGADGPQHPEMVLQ 197

Query: 199 KALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVLDVNDNAPEFEQPFYRVQISEDSPV 258
             LDREEEA   L LTA DGG P RSGT ++YI+V+D NDN P F Q  Y + + E+ P+
Sbjct: 198 SPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQAQYHINVPENVPL 257

Query: 259 GFLVVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTGEIELKKQLDFEKLQSYEV 318
           G  ++ V+ATD D G NGE++YS       + + F+++  TGEI  K+ LDFE+ + Y +
Sbjct: 258 GTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNKEPLDFEEYKMYSM 317

Query: 319 NIEARDAGTFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPEN-APETVVALFSVSDLDSG 377
            ++A+D      K  VLI+V+DVND+APEVT+++ T+ +PEN  P T++AL SV D DSG
Sbjct: 318 EVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGTIIALISVHDQDSG 377

Query: 378 ENGKISCSIQEDLPFLL-KSAENFYTLLTERPLDRESRAEYNITITVTDLGTPMLITQLN 436
           +NG  +C I  +LPF L K  +N+Y L+TER LDRE  + YNITIT  D GTP L T+ +
Sbjct: 378 DNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITAIDQGTPALSTETH 437

Query: 437 MTVLIADVNDNAPAFTQTSYTLFVRENNSPALHIRSVSATDRDSGTNAQVTYSLLPPQDP 496
           +++L+ D+NDN+P F Q SY+ ++ ENN     I SV A D DS  NAQ+TYSL+     
Sbjct: 438 ISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNENAQITYSLIEDTIQ 497

Query: 497 HLPLTSLVSINADNGHLFALRSLDYEALQGFQFRVGASDHGSPALSSEALVRVVVLDAND 556
             PL++ +SIN+D G L+ALRS DYE  +  Q +V A D G P LSS   + + +LD ND
Sbjct: 498 GAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSSNVSLSLFLLDQND 557

Query: 557 NSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATELGLF 615
           N+P +LYP L    +   EL P +AEPGYLVTKVVAVD DSGQNAWLSY+LLKA+E GLF
Sbjct: 558 NAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLF 617

Query: 616 GVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQPYLPLPE 675
            V  H GEVRTAR L +RDA K  LVV V+D+G+PP SAT TL V + D  S     L  
Sbjct: 618 SVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRISDILADLGS 677

Query: 676 AAPTQAQADL-LTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRCLVPEGPLPG 734
             P+    D  LT+YLVVA A+VS +FL  V++ +A RL R  ++  +         +PG
Sbjct: 678 LEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGGLASMPG 737

Query: 735 -HLVDMSGTRTLSQSYQYEVCLAGGSGTNEFKFLKP 769
            H V + G R   Q+Y +EV L   S  +   F +P
Sbjct: 738 SHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQP 773


>gi|11128035 protocadherin gamma subfamily B, 2 isoform 1 precursor
           [Homo sapiens]
          Length = 931

 Score =  639 bits (1649), Expect = 0.0
 Identities = 363/780 (46%), Positives = 497/780 (63%), Gaps = 24/780 (3%)

Query: 8   ICRQRQVLFSFLLLGLSLAGAAEPRS--YSVVEETEGSSFVTNLAKDLGLEQREFSRRGV 65
           + R  QVL  FLL   SL   A P    YS+ EE   +S V NLAKDLGL  R+   R +
Sbjct: 10  LVRWLQVLLPFLL---SLFPGALPVQIRYSIPEELAKNSVVGNLAKDLGLSVRDLPARKL 66

Query: 66  RVVSRGNKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQAELQVI 125
           RV +   K +  +N E+ DLL+++++DRE +CG    CVL F  + E+P   F   + V 
Sbjct: 67  RVSAE--KEYFTVNPESGDLLVSDRIDREQICGKQPLCVLDFDTVAENPLNIFYIAVIVQ 124

Query: 126 DINDHSPVFLDKQMLVKVSESSPPGTTFPLKNAEDLDVGQNNIENYIISPNSYFRVLTRK 185
           DIND++P+F   ++ +K+ ES+ PGTTFPL  A D DVG N+++ Y ++ N YF +  ++
Sbjct: 125 DINDNTPLFKQTKINLKIGESTKPGTTFPLDPALDSDVGPNSLQRYHLNDNEYFDLAEKQ 184

Query: 186 RSDGRKYPELVLDKALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVLDVNDNAPEFEQ 245
             DGRKYPEL+L  +LDREE +  +L LTA+DGG PP+SGT Q+ I+V D NDN P F Q
Sbjct: 185 TPDGRKYPELILKHSLDREEHSLHQLVLTAVDGGDPPQSGTTQIRIKVTDANDNPPVFSQ 244

Query: 246 PFYRVQISEDSPVGFLVVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTGEIELK 305
             YRV + ED P GF V++V+ATD D G+N EI+YS     E++   F +N  TGEI  K
Sbjct: 245 DVYRVTLREDVPPGFFVLQVTATDRDEGINAEITYSFHNVDEQVKHFFNLNEKTGEITTK 304

Query: 306 KQLDFEKLQSYEVNIEARDAGTFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENAPE-T 364
             LDFE   SY ++IEA+D G  +  C++ ++++D ND APEV +++ ++P+PE++P  T
Sbjct: 305 DDLDFEIASSYTLSIEAKDPGDLAAHCSIQVEILDDNDCAPEVIVTSVSTPLPEDSPPGT 364

Query: 365 VVALFSVSDLDSGENGKISCSIQEDLPFLLK-SAENFYTLLTERPLDRESRAEYNITITV 423
           V+AL    D DSGENG++ C +  +  F+LK S++N+Y L+T+  LDRE   EYN+TIT 
Sbjct: 365 VIALIKTRDRDSGENGEVYCQVLGNAKFILKSSSKNYYKLVTDGALDREEIPEYNLTITA 424

Query: 424 TDLGTPMLITQLNMTVLIADVNDNAPAFTQTSYTLFVRENNSPALHIRSVSATDRDSGTN 483
           TD G P L + + +T+ I+DVNDNAP F QTSY + V ENN P   I  +SA+D D G +
Sbjct: 425 TDGGKPPLSSSIIVTLHISDVNDNAPVFQQTSYMVHVAENNPPGASIAQISASDPDLGPS 484

Query: 484 AQVTYSLLPPQDPHLPLTSLVSINADNGHLFALRSLDYEALQGFQFRVGASDHGSPALSS 543
            QV+YS++        + S VS++A +G +FA R+ D+E L+ F+  + A D GSPALS+
Sbjct: 485 GQVSYSIVASDLKPREILSYVSVSAQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSA 544

Query: 544 EALVRVVVLDANDNSPFVLYPL--QNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAW 601
              +RV+V D NDN+P VLYP    +GSA   ++VPRAAEPGYLVTKVVAVD DSG NAW
Sbjct: 545 NVSLRVLVGDLNDNAPRVLYPALGPDGSA-LFDMVPRAAEPGYLVTKVVAVDADSGHNAW 603

Query: 602 LSYQLLKATELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVL 661
           LSY +L+A+E GLF +    GEVRTAR L +RDAA+ RL+V V+D G+PP SATATLH++
Sbjct: 604 LSYHVLQASEPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLI 663

Query: 662 LVDGFSQPYLPLPE-AAPTQAQADLLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 720
             D   +    L +   P+  QA  L  YLVVALA +S LF  +V+L +++RL R S  +
Sbjct: 664 FADSLQEVLPDLSDRREPSDPQAK-LQFYLVVALALISVLFFLAVILAISLRL-RLSSRS 721

Query: 721 SVGRCLVP---EGPLPGHLVDMS-GTRTLSQSYQYEVCLAGGSGTNEFKFLKPIIPNFPP 776
               C  P     P PG L + S GT      Y Y +C+A  S   EF FL  I P   P
Sbjct: 722 DAWDCFQPGLSSKPGPGVLPNYSEGT----LPYSYNLCVASQSAKTEFNFLN-ITPELVP 776


>gi|14270493 protocadherin gamma subfamily B, 2 isoform 2 precursor
           [Homo sapiens]
          Length = 811

 Score =  639 bits (1649), Expect = 0.0
 Identities = 363/780 (46%), Positives = 497/780 (63%), Gaps = 24/780 (3%)

Query: 8   ICRQRQVLFSFLLLGLSLAGAAEPRS--YSVVEETEGSSFVTNLAKDLGLEQREFSRRGV 65
           + R  QVL  FLL   SL   A P    YS+ EE   +S V NLAKDLGL  R+   R +
Sbjct: 10  LVRWLQVLLPFLL---SLFPGALPVQIRYSIPEELAKNSVVGNLAKDLGLSVRDLPARKL 66

Query: 66  RVVSRGNKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQAELQVI 125
           RV +   K +  +N E+ DLL+++++DRE +CG    CVL F  + E+P   F   + V 
Sbjct: 67  RVSAE--KEYFTVNPESGDLLVSDRIDREQICGKQPLCVLDFDTVAENPLNIFYIAVIVQ 124

Query: 126 DINDHSPVFLDKQMLVKVSESSPPGTTFPLKNAEDLDVGQNNIENYIISPNSYFRVLTRK 185
           DIND++P+F   ++ +K+ ES+ PGTTFPL  A D DVG N+++ Y ++ N YF +  ++
Sbjct: 125 DINDNTPLFKQTKINLKIGESTKPGTTFPLDPALDSDVGPNSLQRYHLNDNEYFDLAEKQ 184

Query: 186 RSDGRKYPELVLDKALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVLDVNDNAPEFEQ 245
             DGRKYPEL+L  +LDREE +  +L LTA+DGG PP+SGT Q+ I+V D NDN P F Q
Sbjct: 185 TPDGRKYPELILKHSLDREEHSLHQLVLTAVDGGDPPQSGTTQIRIKVTDANDNPPVFSQ 244

Query: 246 PFYRVQISEDSPVGFLVVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTGEIELK 305
             YRV + ED P GF V++V+ATD D G+N EI+YS     E++   F +N  TGEI  K
Sbjct: 245 DVYRVTLREDVPPGFFVLQVTATDRDEGINAEITYSFHNVDEQVKHFFNLNEKTGEITTK 304

Query: 306 KQLDFEKLQSYEVNIEARDAGTFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENAPE-T 364
             LDFE   SY ++IEA+D G  +  C++ ++++D ND APEV +++ ++P+PE++P  T
Sbjct: 305 DDLDFEIASSYTLSIEAKDPGDLAAHCSIQVEILDDNDCAPEVIVTSVSTPLPEDSPPGT 364

Query: 365 VVALFSVSDLDSGENGKISCSIQEDLPFLLK-SAENFYTLLTERPLDRESRAEYNITITV 423
           V+AL    D DSGENG++ C +  +  F+LK S++N+Y L+T+  LDRE   EYN+TIT 
Sbjct: 365 VIALIKTRDRDSGENGEVYCQVLGNAKFILKSSSKNYYKLVTDGALDREEIPEYNLTITA 424

Query: 424 TDLGTPMLITQLNMTVLIADVNDNAPAFTQTSYTLFVRENNSPALHIRSVSATDRDSGTN 483
           TD G P L + + +T+ I+DVNDNAP F QTSY + V ENN P   I  +SA+D D G +
Sbjct: 425 TDGGKPPLSSSIIVTLHISDVNDNAPVFQQTSYMVHVAENNPPGASIAQISASDPDLGPS 484

Query: 484 AQVTYSLLPPQDPHLPLTSLVSINADNGHLFALRSLDYEALQGFQFRVGASDHGSPALSS 543
            QV+YS++        + S VS++A +G +FA R+ D+E L+ F+  + A D GSPALS+
Sbjct: 485 GQVSYSIVASDLKPREILSYVSVSAQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSA 544

Query: 544 EALVRVVVLDANDNSPFVLYPL--QNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAW 601
              +RV+V D NDN+P VLYP    +GSA   ++VPRAAEPGYLVTKVVAVD DSG NAW
Sbjct: 545 NVSLRVLVGDLNDNAPRVLYPALGPDGSA-LFDMVPRAAEPGYLVTKVVAVDADSGHNAW 603

Query: 602 LSYQLLKATELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVL 661
           LSY +L+A+E GLF +    GEVRTAR L +RDAA+ RL+V V+D G+PP SATATLH++
Sbjct: 604 LSYHVLQASEPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLI 663

Query: 662 LVDGFSQPYLPLPE-AAPTQAQADLLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 720
             D   +    L +   P+  QA  L  YLVVALA +S LF  +V+L +++RL R S  +
Sbjct: 664 FADSLQEVLPDLSDRREPSDPQAK-LQFYLVVALALISVLFFLAVILAISLRL-RLSSRS 721

Query: 721 SVGRCLVP---EGPLPGHLVDMS-GTRTLSQSYQYEVCLAGGSGTNEFKFLKPIIPNFPP 776
               C  P     P PG L + S GT      Y Y +C+A  S   EF FL  I P   P
Sbjct: 722 DAWDCFQPGLSSKPGPGVLPNYSEGT----LPYSYNLCVASQSAKTEFNFLN-ITPELVP 776


>gi|14196468 protocadherin gamma subfamily A, 4 isoform 2 precursor
           [Homo sapiens]
          Length = 820

 Score =  639 bits (1648), Expect = 0.0
 Identities = 355/760 (46%), Positives = 484/760 (63%), Gaps = 13/760 (1%)

Query: 19  LLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREFSRRGVRVVSRGNKLHLQL 78
           LLLG+ +   AE   YSV EE E  S V N+AKDLGL  RE + RGVR+VSRG      L
Sbjct: 18  LLLGVLVEIRAEQILYSVFEEQEEGSVVGNIAKDLGLAPRELAERGVRIVSRGRTQLFAL 77

Query: 79  NQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQAELQVIDINDHSPVFLDKQ 138
           N  +  L+   ++DRE+LC  +  CV   ++LLE   +  + E+++ID+ND+ P F  +Q
Sbjct: 78  NPRSGTLVTAGRIDREELCDRSPNCVTNLEILLEDTVKILRVEVEIIDVNDNPPSFGTEQ 137

Query: 139 MLVKVSESSPPGTTFPLKNAEDLDVGQNNIENYIISPNSYFRVLTRKRSDGRKYPELVLD 198
             +KV+E+  PG  FPL  A D DVG N+++ Y ++ N YF +  +  +DG KYPELVL+
Sbjct: 138 REIKVAENENPGARFPLPEAFDPDVGVNSLQGYQLNSNGYFSLDVQSGADGIKYPELVLE 197

Query: 199 KALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVLDVNDNAPEFEQPFYRVQISEDSPV 258
           +ALDREEEA   L LTA DGG P RSGTA++ I ++D NDNAP F QP Y V + E+ PV
Sbjct: 198 RALDREEEAVHHLVLTAFDGGDPVRSGTARILIILVDTNDNAPVFTQPEYHVSVRENVPV 257

Query: 259 GFLVVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTGEIELKKQLDFEKLQSYEV 318
           G  ++ V ATD D G NG+++YS  +  ++I + F++N L+G+I +   LD+E    Y++
Sbjct: 258 GTRLLTVKATDPDEGANGDVTYSFRKVRDKISQLFQLNSLSGDITILGGLDYEDSGFYDI 317

Query: 319 NIEARDAGTFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPE-NAPETVVALFSVSDLDSG 377
           ++EA D      +  VL+ V+D ND+APEVT+++ TS + E ++P TV+ALF+V D DSG
Sbjct: 318 DVEAHDGPGLRARSKVLVTVLDENDNAPEVTVTSLTSSVQESSSPGTVIALFNVHDSDSG 377

Query: 378 ENGKISCSIQEDLPFLL-KSAENFYTLLTERPLDRESRAEYNITITVTDLGTPMLITQLN 436
            NG ++CSI ++LPF L K+  N+Y LLT R LDRE  +EYNIT+T TD GTP L T+ +
Sbjct: 378 GNGLVTCSIPDNLPFTLEKTYGNYYRLLTHRTLDREEVSEYNITVTATDQGTPPLSTETH 437

Query: 437 MTVLIADVNDNAPAFTQTSYTLFVRENNSPALHIRSVSATDRDSGTNAQVTYSLLPPQDP 496
           +++ + D+NDN P F   SY+ ++ ENN     I S++A D DSG NA++TYSL      
Sbjct: 438 ISLQVMDINDNPPTFPHASYSAYIPENNPRGASILSMTAQDPDSGDNARITYSLAEDTFQ 497

Query: 497 HLPLTSLVSINADNGHLFALRSLDYEALQGFQFRVGASDHGSPALSSEALVRVVVLDAND 556
             PL+S VSIN++ G L+AL S DYE  +  Q  + ASD G P LSS   + + VLD ND
Sbjct: 498 GAPLSSYVSINSNTGILYALCSFDYEQFRDLQLLMTASDSGDPPLSSNVSLSLFVLDQND 557

Query: 557 NSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATELGLF 615
           N P +LYP      +   EL PR+A+ GYLVTKVVAVD DSGQNAWLSY LLK++E GLF
Sbjct: 558 NVPEILYPTFPTDGSTGVELAPRSADSGYLVTKVVAVDRDSGQNAWLSYSLLKSSEPGLF 617

Query: 616 GVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQPYLPLPE 675
            V  H GEVRTAR L +RDA K RLVV+V+D+G+PP SAT TL V + D        L  
Sbjct: 618 AVGLHTGEVRTARALLDRDALKQRLVVVVQDHGQPPLSATVTLTVAVADSIPDVLADLGS 677

Query: 676 AAPTQAQADL-LTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRCLVPEGP-LP 733
             P+    D  LT+YLVVA+A+VS +FL  V + +A++L R  ++    R L  EG  L 
Sbjct: 678 LKPSADPDDSGLTLYLVVAVAAVSCVFLAFVTVLLALKLRRWHKS----RLLHAEGSRLA 733

Query: 734 G----HLVDMSGTRTLSQSYQYEVCLAGGSGTNEFKFLKP 769
           G    H V + G R   Q+Y +EV L   S  +   F +P
Sbjct: 734 GVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFSQP 773


>gi|11056026 protocadherin gamma subfamily A, 4 isoform 1 precursor
           [Homo sapiens]
          Length = 931

 Score =  639 bits (1648), Expect = 0.0
 Identities = 355/760 (46%), Positives = 484/760 (63%), Gaps = 13/760 (1%)

Query: 19  LLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREFSRRGVRVVSRGNKLHLQL 78
           LLLG+ +   AE   YSV EE E  S V N+AKDLGL  RE + RGVR+VSRG      L
Sbjct: 18  LLLGVLVEIRAEQILYSVFEEQEEGSVVGNIAKDLGLAPRELAERGVRIVSRGRTQLFAL 77

Query: 79  NQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQAELQVIDINDHSPVFLDKQ 138
           N  +  L+   ++DRE+LC  +  CV   ++LLE   +  + E+++ID+ND+ P F  +Q
Sbjct: 78  NPRSGTLVTAGRIDREELCDRSPNCVTNLEILLEDTVKILRVEVEIIDVNDNPPSFGTEQ 137

Query: 139 MLVKVSESSPPGTTFPLKNAEDLDVGQNNIENYIISPNSYFRVLTRKRSDGRKYPELVLD 198
             +KV+E+  PG  FPL  A D DVG N+++ Y ++ N YF +  +  +DG KYPELVL+
Sbjct: 138 REIKVAENENPGARFPLPEAFDPDVGVNSLQGYQLNSNGYFSLDVQSGADGIKYPELVLE 197

Query: 199 KALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVLDVNDNAPEFEQPFYRVQISEDSPV 258
           +ALDREEEA   L LTA DGG P RSGTA++ I ++D NDNAP F QP Y V + E+ PV
Sbjct: 198 RALDREEEAVHHLVLTAFDGGDPVRSGTARILIILVDTNDNAPVFTQPEYHVSVRENVPV 257

Query: 259 GFLVVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTGEIELKKQLDFEKLQSYEV 318
           G  ++ V ATD D G NG+++YS  +  ++I + F++N L+G+I +   LD+E    Y++
Sbjct: 258 GTRLLTVKATDPDEGANGDVTYSFRKVRDKISQLFQLNSLSGDITILGGLDYEDSGFYDI 317

Query: 319 NIEARDAGTFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPE-NAPETVVALFSVSDLDSG 377
           ++EA D      +  VL+ V+D ND+APEVT+++ TS + E ++P TV+ALF+V D DSG
Sbjct: 318 DVEAHDGPGLRARSKVLVTVLDENDNAPEVTVTSLTSSVQESSSPGTVIALFNVHDSDSG 377

Query: 378 ENGKISCSIQEDLPFLL-KSAENFYTLLTERPLDRESRAEYNITITVTDLGTPMLITQLN 436
            NG ++CSI ++LPF L K+  N+Y LLT R LDRE  +EYNIT+T TD GTP L T+ +
Sbjct: 378 GNGLVTCSIPDNLPFTLEKTYGNYYRLLTHRTLDREEVSEYNITVTATDQGTPPLSTETH 437

Query: 437 MTVLIADVNDNAPAFTQTSYTLFVRENNSPALHIRSVSATDRDSGTNAQVTYSLLPPQDP 496
           +++ + D+NDN P F   SY+ ++ ENN     I S++A D DSG NA++TYSL      
Sbjct: 438 ISLQVMDINDNPPTFPHASYSAYIPENNPRGASILSMTAQDPDSGDNARITYSLAEDTFQ 497

Query: 497 HLPLTSLVSINADNGHLFALRSLDYEALQGFQFRVGASDHGSPALSSEALVRVVVLDAND 556
             PL+S VSIN++ G L+AL S DYE  +  Q  + ASD G P LSS   + + VLD ND
Sbjct: 498 GAPLSSYVSINSNTGILYALCSFDYEQFRDLQLLMTASDSGDPPLSSNVSLSLFVLDQND 557

Query: 557 NSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATELGLF 615
           N P +LYP      +   EL PR+A+ GYLVTKVVAVD DSGQNAWLSY LLK++E GLF
Sbjct: 558 NVPEILYPTFPTDGSTGVELAPRSADSGYLVTKVVAVDRDSGQNAWLSYSLLKSSEPGLF 617

Query: 616 GVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQPYLPLPE 675
            V  H GEVRTAR L +RDA K RLVV+V+D+G+PP SAT TL V + D        L  
Sbjct: 618 AVGLHTGEVRTARALLDRDALKQRLVVVVQDHGQPPLSATVTLTVAVADSIPDVLADLGS 677

Query: 676 AAPTQAQADL-LTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRCLVPEGP-LP 733
             P+    D  LT+YLVVA+A+VS +FL  V + +A++L R  ++    R L  EG  L 
Sbjct: 678 LKPSADPDDSGLTLYLVVAVAAVSCVFLAFVTVLLALKLRRWHKS----RLLHAEGSRLA 733

Query: 734 G----HLVDMSGTRTLSQSYQYEVCLAGGSGTNEFKFLKP 769
           G    H V + G R   Q+Y +EV L   S  +   F +P
Sbjct: 734 GVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFSQP 773


>gi|11056030 protocadherin gamma subfamily A, 2 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score =  639 bits (1648), Expect = 0.0
 Identities = 358/777 (46%), Positives = 490/777 (63%), Gaps = 12/777 (1%)

Query: 1   MEASGKLICRQRQVLFSFLLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREF 60
           M A  KL   ++ VL  FLL  L  A A + R YSV EE +  SFV N+AKDLGLE    
Sbjct: 1   MAALQKLPHCRKLVLLCFLLATLWEARAGQIR-YSVREEIDRGSFVGNIAKDLGLEPLAL 59

Query: 61  SRRGVRVVSRGNKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQA 120
           + +GVR+VSRG      LN  +  L+   ++DRE+LC  + PC+L F +LLE     +  
Sbjct: 60  AEQGVRIVSRGRSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSV 119

Query: 121 ELQVIDINDHSPVFLDKQMLVKVSESSPPGTTFPLKNAEDLDVGQNNIENYIISPNSYFR 180
           E+++ DIND++P F  +++ +K+SE++ PG   PLKNA D DVG+N ++ Y ++PN +F 
Sbjct: 120 EVEITDINDNAPRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFS 179

Query: 181 VLTRKRSDGRKYPELVLDKALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVLDVNDNA 240
           +  R+ +DG KYPELVL+++LDREEEA   L L A DGG P  SGT+++ ++VLD NDNA
Sbjct: 180 LDVRRGADGNKYPELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNA 239

Query: 241 PEFEQPFYRVQISEDSPVGFLVVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTG 300
           P F QP YR+ I E++ VG  ++ V+ATD D G   ++ Y L ++  E  + F++   +G
Sbjct: 240 PVFTQPEYRISIPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSG 299

Query: 301 EIELKKQLDFEKLQSYEVNIEARDAGTFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPEN 360
           E+ + K LD+E    +E++IEA+D      +  V++ V+DVND+APE  M++ TS + E+
Sbjct: 300 ELTIIKDLDYEDATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSED 359

Query: 361 A-PETVVALFSVSDLDSGENGKISCSIQEDLPFLL-KSAENFYTLLTERPLDRESRAEYN 418
           + P T++ LF+V D DSG+N   +CS+ EDLPF L KS +N+Y L+T R LDRE  + YN
Sbjct: 360 SLPGTIIGLFNVHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYN 419

Query: 419 ITITVTDLGTPMLITQLNMTVLIADVNDNAPAFTQTSYTLFVRENNSPALHIRSVSATDR 478
           IT+T  D G P L T  ++ + +AD+NDNAPAF++TSY+ ++ ENN     + SV+A D 
Sbjct: 420 ITLTAKDGGNPSLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDP 479

Query: 479 DSGTNAQVTYSLLPPQDPHLPLTSLVSINADNGHLFALRSLDYEALQGFQFRVGASDHGS 538
           DS  NA VTYS         PL+S +SIN+D G L+ALRS DYE L+  Q  V A D G+
Sbjct: 480 DSNDNAHVTYSFAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGN 539

Query: 539 PALSSEALVRVVVLDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSG 597
           P LSS   + + VLD NDN+P +LYP      +   EL PR+AEPGYLVTKVVAVD DSG
Sbjct: 540 PPLSSNVSLSLFVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSG 599

Query: 598 QNAWLSYQLLKATELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATAT 657
           QNAWLSY LLKA+E GLF V  H GEVRTAR L +RDA K  LVV ++D+G+PP SAT T
Sbjct: 600 QNAWLSYHLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVT 659

Query: 658 LHVLLVDGFSQPYLPLPEAAPTQAQADL-LTVYLVVALASVSSLFLFSVLLFVAVRLCR- 715
           L V + D        L    P+    D  LT+YLVVA+A+VS +FL  V++ +A RL R 
Sbjct: 660 LTVAVADRIPDILADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRW 719

Query: 716 ---RSRAASVGRCLVPEGPLPGHLVDMSGTRTLSQSYQYEVCLAGGSGTNEFKFLKP 769
              R   AS G      G    H V + G R   Q+Y +EV L   S  +   F +P
Sbjct: 720 HKSRLLQASGGSL---TGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQP 773


>gi|14196462 protocadherin gamma subfamily A, 2 isoform 2 precursor
           [Homo sapiens]
          Length = 823

 Score =  639 bits (1648), Expect = 0.0
 Identities = 358/777 (46%), Positives = 490/777 (63%), Gaps = 12/777 (1%)

Query: 1   MEASGKLICRQRQVLFSFLLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREF 60
           M A  KL   ++ VL  FLL  L  A A + R YSV EE +  SFV N+AKDLGLE    
Sbjct: 1   MAALQKLPHCRKLVLLCFLLATLWEARAGQIR-YSVREEIDRGSFVGNIAKDLGLEPLAL 59

Query: 61  SRRGVRVVSRGNKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQA 120
           + +GVR+VSRG      LN  +  L+   ++DRE+LC  + PC+L F +LLE     +  
Sbjct: 60  AEQGVRIVSRGRSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSV 119

Query: 121 ELQVIDINDHSPVFLDKQMLVKVSESSPPGTTFPLKNAEDLDVGQNNIENYIISPNSYFR 180
           E+++ DIND++P F  +++ +K+SE++ PG   PLKNA D DVG+N ++ Y ++PN +F 
Sbjct: 120 EVEITDINDNAPRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFS 179

Query: 181 VLTRKRSDGRKYPELVLDKALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVLDVNDNA 240
           +  R+ +DG KYPELVL+++LDREEEA   L L A DGG P  SGT+++ ++VLD NDNA
Sbjct: 180 LDVRRGADGNKYPELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNA 239

Query: 241 PEFEQPFYRVQISEDSPVGFLVVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTG 300
           P F QP YR+ I E++ VG  ++ V+ATD D G   ++ Y L ++  E  + F++   +G
Sbjct: 240 PVFTQPEYRISIPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSG 299

Query: 301 EIELKKQLDFEKLQSYEVNIEARDAGTFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPEN 360
           E+ + K LD+E    +E++IEA+D      +  V++ V+DVND+APE  M++ TS + E+
Sbjct: 300 ELTIIKDLDYEDATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSED 359

Query: 361 A-PETVVALFSVSDLDSGENGKISCSIQEDLPFLL-KSAENFYTLLTERPLDRESRAEYN 418
           + P T++ LF+V D DSG+N   +CS+ EDLPF L KS +N+Y L+T R LDRE  + YN
Sbjct: 360 SLPGTIIGLFNVHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYN 419

Query: 419 ITITVTDLGTPMLITQLNMTVLIADVNDNAPAFTQTSYTLFVRENNSPALHIRSVSATDR 478
           IT+T  D G P L T  ++ + +AD+NDNAPAF++TSY+ ++ ENN     + SV+A D 
Sbjct: 420 ITLTAKDGGNPSLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDP 479

Query: 479 DSGTNAQVTYSLLPPQDPHLPLTSLVSINADNGHLFALRSLDYEALQGFQFRVGASDHGS 538
           DS  NA VTYS         PL+S +SIN+D G L+ALRS DYE L+  Q  V A D G+
Sbjct: 480 DSNDNAHVTYSFAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGN 539

Query: 539 PALSSEALVRVVVLDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSG 597
           P LSS   + + VLD NDN+P +LYP      +   EL PR+AEPGYLVTKVVAVD DSG
Sbjct: 540 PPLSSNVSLSLFVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSG 599

Query: 598 QNAWLSYQLLKATELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATAT 657
           QNAWLSY LLKA+E GLF V  H GEVRTAR L +RDA K  LVV ++D+G+PP SAT T
Sbjct: 600 QNAWLSYHLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVT 659

Query: 658 LHVLLVDGFSQPYLPLPEAAPTQAQADL-LTVYLVVALASVSSLFLFSVLLFVAVRLCR- 715
           L V + D        L    P+    D  LT+YLVVA+A+VS +FL  V++ +A RL R 
Sbjct: 660 LTVAVADRIPDILADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRW 719

Query: 716 ---RSRAASVGRCLVPEGPLPGHLVDMSGTRTLSQSYQYEVCLAGGSGTNEFKFLKP 769
              R   AS G      G    H V + G R   Q+Y +EV L   S  +   F +P
Sbjct: 720 HKSRLLQASGGSL---TGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQP 773


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.134    0.383 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,250,336
Number of Sequences: 37866
Number of extensions: 1363320
Number of successful extensions: 10658
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 195
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 3171
Number of HSP's gapped (non-prelim): 670
length of query: 798
length of database: 18,247,518
effective HSP length: 110
effective length of query: 688
effective length of database: 14,082,258
effective search space: 9688593504
effective search space used: 9688593504
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 66 (30.0 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.

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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.