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Search of human proteins with 156416003
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|156416003 succinate dehydrogenase complex, subunit A,
flavoprotein precursor [Homo sapiens]
(664 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|156416003 succinate dehydrogenase complex, subunit A, flavopr... 1357 0.0
gi|169165769 PREDICTED: similar to succinate dehydrogenase compl... 211 2e-54
gi|229577391 pyridine nucleotide-disulphide oxidoreductase domai... 33 0.84
gi|33519426 thioredoxin reductase 1 isoform 2 [Homo sapiens] 33 0.84
gi|148277071 thioredoxin reductase 1 isoform 3 [Homo sapiens] 33 0.84
gi|148277065 thioredoxin reductase 1 isoform 1 [Homo sapiens] 33 0.84
gi|33519430 thioredoxin reductase 1 isoform 2 [Homo sapiens] 33 0.84
gi|33519428 thioredoxin reductase 1 isoform 2 [Homo sapiens] 33 0.84
gi|154816208 phosphotyrosine interaction domain containing 1 iso... 32 1.4
gi|40255260 phosphotyrosine interaction domain containing 1 isof... 32 1.4
gi|27477109 itchy homolog E3 ubiquitin protein ligase [Homo sapi... 32 1.9
gi|57165412 acyl-CoA synthetase long-chain family member 6 isofo... 32 2.5
gi|57165410 acyl-CoA synthetase long-chain family member 6 isofo... 32 2.5
gi|169790958 methionine synthase reductase isoform 1 [Homo sapiens] 31 3.2
gi|169790956 methionine synthase reductase isoform 2 [Homo sapiens] 31 3.2
gi|183227703 mitochondrial translation optimization 1 homolog is... 31 4.2
gi|19882217 mitochondrial translation optimization 1 homolog iso... 31 4.2
gi|74024895 mitochondrial translation optimization 1 homolog iso... 31 4.2
gi|91199540 dihydrolipoamide dehydrogenase precursor [Homo sapiens] 30 7.1
>gi|156416003 succinate dehydrogenase complex, subunit A,
flavoprotein precursor [Homo sapiens]
Length = 664
Score = 1357 bits (3511), Expect = 0.0
Identities = 664/664 (100%), Positives = 664/664 (100%)
Query: 1 MSGVRGLSRLLSARRLALAKAWPTVLQTGTRGFHFTVDGNKRASAKVSDSISAQYPVVDH 60
MSGVRGLSRLLSARRLALAKAWPTVLQTGTRGFHFTVDGNKRASAKVSDSISAQYPVVDH
Sbjct: 1 MSGVRGLSRLLSARRLALAKAWPTVLQTGTRGFHFTVDGNKRASAKVSDSISAQYPVVDH 60
Query: 61 EFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEEDNWR 120
EFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEEDNWR
Sbjct: 61 EFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEEDNWR 120
Query: 121 WHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENYGMPFSRTEDGKIYQRAFGGQSLKF 180
WHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENYGMPFSRTEDGKIYQRAFGGQSLKF
Sbjct: 121 WHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENYGMPFSRTEDGKIYQRAFGGQSLKF 180
Query: 181 GKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIE 240
GKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIE
Sbjct: 181 GKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIE 240
Query: 241 DGSIHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGI 300
DGSIHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGI
Sbjct: 241 DGSIHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGI 300
Query: 301 YGAGCLITEGCRGEGGILINSQGERFMERYAPVAKDLASRDVVSRSMTLEIREGRGCGPE 360
YGAGCLITEGCRGEGGILINSQGERFMERYAPVAKDLASRDVVSRSMTLEIREGRGCGPE
Sbjct: 301 YGAGCLITEGCRGEGGILINSQGERFMERYAPVAKDLASRDVVSRSMTLEIREGRGCGPE 360
Query: 361 KDHVYLQLHHLPPEQLATRLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYKGQ 420
KDHVYLQLHHLPPEQLATRLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYKGQ
Sbjct: 361 KDHVYLQLHHLPPEQLATRLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYKGQ 420
Query: 421 VLRHVNGQDQIVPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSIEESCRPGDK 480
VLRHVNGQDQIVPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSIEESCRPGDK
Sbjct: 421 VLRHVNGQDQIVPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSIEESCRPGDK 480
Query: 481 VPPIKPNAGEESVMNLDKLRFADGSIRTSELRLSMQKSMQNHAAVFRVGSVLQEGCGKIS 540
VPPIKPNAGEESVMNLDKLRFADGSIRTSELRLSMQKSMQNHAAVFRVGSVLQEGCGKIS
Sbjct: 481 VPPIKPNAGEESVMNLDKLRFADGSIRTSELRLSMQKSMQNHAAVFRVGSVLQEGCGKIS 540
Query: 541 KLYGDLKHLKTFDRGMVWNTDLVETLELQNLMLCALQTIYGAEARKESRGAHAREDYKVR 600
KLYGDLKHLKTFDRGMVWNTDLVETLELQNLMLCALQTIYGAEARKESRGAHAREDYKVR
Sbjct: 541 KLYGDLKHLKTFDRGMVWNTDLVETLELQNLMLCALQTIYGAEARKESRGAHAREDYKVR 600
Query: 601 IDEYDYSKPIQGQQKKPFEEHWRKHTLSYVDVGTGKVTLEYRPVIDKTLNEADCATVPPA 660
IDEYDYSKPIQGQQKKPFEEHWRKHTLSYVDVGTGKVTLEYRPVIDKTLNEADCATVPPA
Sbjct: 601 IDEYDYSKPIQGQQKKPFEEHWRKHTLSYVDVGTGKVTLEYRPVIDKTLNEADCATVPPA 660
Query: 661 IRSY 664
IRSY
Sbjct: 661 IRSY 664
>gi|169165769 PREDICTED: similar to succinate dehydrogenase complex,
subunit A, flavoprotein (Fp) [Homo sapiens]
Length = 109
Score = 211 bits (536), Expect = 2e-54
Identities = 100/109 (91%), Positives = 104/109 (95%)
Query: 556 MVWNTDLVETLELQNLMLCALQTIYGAEARKESRGAHAREDYKVRIDEYDYSKPIQGQQK 615
MVWNTDLVETLELQNLMLCALQT+ GAEA KESRGAHA EDYKVRIDEYD+SKPIQGQQK
Sbjct: 1 MVWNTDLVETLELQNLMLCALQTVNGAEAGKESRGAHAGEDYKVRIDEYDHSKPIQGQQK 60
Query: 616 KPFEEHWRKHTLSYVDVGTGKVTLEYRPVIDKTLNEADCATVPPAIRSY 664
KPFEEHWRKHTLSYVDV TGKVT+EYRP+IDKTLNEADCATVPPAI SY
Sbjct: 61 KPFEEHWRKHTLSYVDVSTGKVTVEYRPIIDKTLNEADCATVPPAIHSY 109
>gi|229577391 pyridine nucleotide-disulphide oxidoreductase domain
2 [Homo sapiens]
Length = 581
Score = 33.1 bits (74), Expect = 0.84
Identities = 17/28 (60%), Positives = 19/28 (67%)
Query: 61 EFDAVVVGAGGAGLRAAFGLSEAGFNTA 88
E+DAVV+GAG GL AA L G NTA
Sbjct: 34 EYDAVVIGAGHNGLVAAAYLQRLGVNTA 61
>gi|33519426 thioredoxin reductase 1 isoform 2 [Homo sapiens]
Length = 499
Score = 33.1 bits (74), Expect = 0.84
Identities = 34/131 (25%), Positives = 54/131 (41%), Gaps = 25/131 (19%)
Query: 60 HEFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGG--IN--------- 108
+++D +++G G GL AA ++ G + + PT T GG +N
Sbjct: 11 YDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLM 70
Query: 109 ---AALGNMEED--NWRWHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENYGMPFSRT 163
A LG +D N+ W +TVK DW M E + L N+G +
Sbjct: 71 HQAALLGQALQDSRNYGWKVEETVK-HDW-------DRMIEAVQNHIGSL-NWGYRVALR 121
Query: 164 EDGKIYQRAFG 174
E +Y+ A+G
Sbjct: 122 EKKVVYENAYG 132
>gi|148277071 thioredoxin reductase 1 isoform 3 [Homo sapiens]
Length = 649
Score = 33.1 bits (74), Expect = 0.84
Identities = 34/131 (25%), Positives = 54/131 (41%), Gaps = 25/131 (19%)
Query: 60 HEFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGG--IN--------- 108
+++D +++G G GL AA ++ G + + PT T GG +N
Sbjct: 161 YDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLM 220
Query: 109 ---AALGNMEED--NWRWHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENYGMPFSRT 163
A LG +D N+ W +TVK DW M E + L N+G +
Sbjct: 221 HQAALLGQALQDSRNYGWKVEETVK-HDW-------DRMIEAVQNHIGSL-NWGYRVALR 271
Query: 164 EDGKIYQRAFG 174
E +Y+ A+G
Sbjct: 272 EKKVVYENAYG 282
>gi|148277065 thioredoxin reductase 1 isoform 1 [Homo sapiens]
Length = 551
Score = 33.1 bits (74), Expect = 0.84
Identities = 34/131 (25%), Positives = 54/131 (41%), Gaps = 25/131 (19%)
Query: 60 HEFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGG--IN--------- 108
+++D +++G G GL AA ++ G + + PT T GG +N
Sbjct: 63 YDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLM 122
Query: 109 ---AALGNMEED--NWRWHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENYGMPFSRT 163
A LG +D N+ W +TVK DW M E + L N+G +
Sbjct: 123 HQAALLGQALQDSRNYGWKVEETVK-HDW-------DRMIEAVQNHIGSL-NWGYRVALR 173
Query: 164 EDGKIYQRAFG 174
E +Y+ A+G
Sbjct: 174 EKKVVYENAYG 184
>gi|33519430 thioredoxin reductase 1 isoform 2 [Homo sapiens]
Length = 499
Score = 33.1 bits (74), Expect = 0.84
Identities = 34/131 (25%), Positives = 54/131 (41%), Gaps = 25/131 (19%)
Query: 60 HEFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGG--IN--------- 108
+++D +++G G GL AA ++ G + + PT T GG +N
Sbjct: 11 YDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLM 70
Query: 109 ---AALGNMEED--NWRWHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENYGMPFSRT 163
A LG +D N+ W +TVK DW M E + L N+G +
Sbjct: 71 HQAALLGQALQDSRNYGWKVEETVK-HDW-------DRMIEAVQNHIGSL-NWGYRVALR 121
Query: 164 EDGKIYQRAFG 174
E +Y+ A+G
Sbjct: 122 EKKVVYENAYG 132
>gi|33519428 thioredoxin reductase 1 isoform 2 [Homo sapiens]
Length = 499
Score = 33.1 bits (74), Expect = 0.84
Identities = 34/131 (25%), Positives = 54/131 (41%), Gaps = 25/131 (19%)
Query: 60 HEFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGG--IN--------- 108
+++D +++G G GL AA ++ G + + PT T GG +N
Sbjct: 11 YDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLM 70
Query: 109 ---AALGNMEED--NWRWHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENYGMPFSRT 163
A LG +D N+ W +TVK DW M E + L N+G +
Sbjct: 71 HQAALLGQALQDSRNYGWKVEETVK-HDW-------DRMIEAVQNHIGSL-NWGYRVALR 121
Query: 164 EDGKIYQRAFG 174
E +Y+ A+G
Sbjct: 122 EKKVVYENAYG 132
>gi|154816208 phosphotyrosine interaction domain containing 1
isoform 2 [Homo sapiens]
Length = 217
Score = 32.3 bits (72), Expect = 1.4
Identities = 15/34 (44%), Positives = 19/34 (55%)
Query: 610 IQGQQKKPFEEHWRKHTLSYVDVGTGKVTLEYRP 643
+ G +KP E W+KHTL+ DV LE RP
Sbjct: 74 LSGCTEKPVIELWKKHTLAREDVFPANALLEIRP 107
>gi|40255260 phosphotyrosine interaction domain containing 1 isoform
1 [Homo sapiens]
Length = 248
Score = 32.3 bits (72), Expect = 1.4
Identities = 15/34 (44%), Positives = 19/34 (55%)
Query: 610 IQGQQKKPFEEHWRKHTLSYVDVGTGKVTLEYRP 643
+ G +KP E W+KHTL+ DV LE RP
Sbjct: 105 LSGCTEKPVIELWKKHTLAREDVFPANALLEIRP 138
>gi|27477109 itchy homolog E3 ubiquitin protein ligase [Homo
sapiens]
Length = 862
Score = 32.0 bits (71), Expect = 1.9
Identities = 47/199 (23%), Positives = 81/199 (40%), Gaps = 33/199 (16%)
Query: 464 GRACALSIEESCRPGDKVPPIKPNAGEESVMNLDKLRFADGSIRTSELRLSMQKSMQNHA 523
GR + E D+ P+ P E V N+ ++ + D RT+ + +S++N+
Sbjct: 299 GRVYYVDHVEKRTTWDRPEPLPPG-WERRVDNMGRIYYVDHFTRTTTWQRPTLESVRNY- 356
Query: 524 AVFRVGSVLQEGCGKISKLYGDLKHLKTFDRGMVWNTDLVETLELQNL-MLCALQTIYGA 582
++ + S+L G ++ R + N DL T + + L L G
Sbjct: 357 ---------EQWQLQRSQLQGAMQQFN--QRFIYGNQDLFATSQSKEFDPLGPLPP--GW 403
Query: 583 EARKESRGAHAREDYKVRIDEYDYSKPIQGQ-QKKPFEEHWR---------------KHT 626
E R +S G ++ RI +++ + QGQ +KP E W + T
Sbjct: 404 EKRTDSNGRVYFVNHNTRITQWEDPRS-QGQLNEKPLPEGWEMRFTVDGIPYFVDHNRRT 462
Query: 627 LSYVDVGTGKVTLEYRPVI 645
+Y+D TGK L+ P I
Sbjct: 463 TTYIDPRTGKSALDNGPQI 481
>gi|57165412 acyl-CoA synthetase long-chain family member 6 isoform
b [Homo sapiens]
Length = 722
Score = 31.6 bits (70), Expect = 2.5
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 8/62 (12%)
Query: 258 GYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGIYGAGCLITEGCRGEGGI 317
GYG+T + T+ GD T+ A LPC ++ V + C+GEG I
Sbjct: 482 GYGQTECTAGCTFTTPGDWTSGHVGAPLPCNHIKLVDVEELNYW--------ACKGEGEI 533
Query: 318 LI 319
+
Sbjct: 534 CV 535
>gi|57165410 acyl-CoA synthetase long-chain family member 6 isoform
a [Homo sapiens]
Length = 722
Score = 31.6 bits (70), Expect = 2.5
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 8/62 (12%)
Query: 258 GYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGIYGAGCLITEGCRGEGGI 317
GYG+T + T+ GD T+ A LPC ++ V + C+GEG I
Sbjct: 482 GYGQTECTAGCTFTTPGDWTSGHVGAPLPCNHIKLVDVEELNYW--------ACKGEGEI 533
Query: 318 LI 319
+
Sbjct: 534 CV 535
>gi|169790958 methionine synthase reductase isoform 1 [Homo sapiens]
Length = 698
Score = 31.2 bits (69), Expect = 3.2
Identities = 23/104 (22%), Positives = 41/104 (39%)
Query: 400 IPVLPTVHYNMGGIPTNYKGQVLRHVNGQDQIVPGLYACGEAACASVHGANRLGANSLLD 459
+P L N+ G+P Y L+ GQ++ + + + A +L N +
Sbjct: 232 VPPLSQASLNIPGLPPEYLQVHLQESLGQEESQVSVTSADPVFQVPISKAVQLTTNDAIK 291
Query: 460 LVVFGRACALSIEESCRPGDKVPPIKPNAGEESVMNLDKLRFAD 503
+ + + S +PGD I PN+ E L +L+ D
Sbjct: 292 TTLLVELDISNTDFSYQPGDAFSVICPNSDSEVQSLLQRLQLED 335
>gi|169790956 methionine synthase reductase isoform 2 [Homo sapiens]
Length = 725
Score = 31.2 bits (69), Expect = 3.2
Identities = 23/104 (22%), Positives = 41/104 (39%)
Query: 400 IPVLPTVHYNMGGIPTNYKGQVLRHVNGQDQIVPGLYACGEAACASVHGANRLGANSLLD 459
+P L N+ G+P Y L+ GQ++ + + + A +L N +
Sbjct: 259 VPPLSQASLNIPGLPPEYLQVHLQESLGQEESQVSVTSADPVFQVPISKAVQLTTNDAIK 318
Query: 460 LVVFGRACALSIEESCRPGDKVPPIKPNAGEESVMNLDKLRFAD 503
+ + + S +PGD I PN+ E L +L+ D
Sbjct: 319 TTLLVELDISNTDFSYQPGDAFSVICPNSDSEVQSLLQRLQLED 362
>gi|183227703 mitochondrial translation optimization 1 homolog
isoform c [Homo sapiens]
Length = 732
Score = 30.8 bits (68), Expect = 4.2
Identities = 28/98 (28%), Positives = 38/98 (38%), Gaps = 17/98 (17%)
Query: 48 SDSISAQYPVVDHEFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGI 107
SDS + + P FD +V+G G AG AA + G T +T T Q
Sbjct: 27 SDSAAPRTP----HFDVIVIGGGHAGTEAATAAARCGSRTLLLTHRVDT-----IGQMSC 77
Query: 108 NAALGNMEEDNWRWHFYDTVKGSDWL----GDQDAIHY 141
N + G + + H V D L DQ +HY
Sbjct: 78 NPSFGGI----GKGHLMREVDALDGLCSRICDQSGVHY 111
>gi|19882217 mitochondrial translation optimization 1 homolog
isoform b [Homo sapiens]
Length = 717
Score = 30.8 bits (68), Expect = 4.2
Identities = 28/98 (28%), Positives = 38/98 (38%), Gaps = 17/98 (17%)
Query: 48 SDSISAQYPVVDHEFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGI 107
SDS + + P FD +V+G G AG AA + G T +T T Q
Sbjct: 27 SDSAAPRTP----HFDVIVIGGGHAGTEAATAAARCGSRTLLLTHRVDT-----IGQMSC 77
Query: 108 NAALGNMEEDNWRWHFYDTVKGSDWL----GDQDAIHY 141
N + G + + H V D L DQ +HY
Sbjct: 78 NPSFGGI----GKGHLMREVDALDGLCSRICDQSGVHY 111
>gi|74024895 mitochondrial translation optimization 1 homolog
isoform a [Homo sapiens]
Length = 692
Score = 30.8 bits (68), Expect = 4.2
Identities = 28/98 (28%), Positives = 38/98 (38%), Gaps = 17/98 (17%)
Query: 48 SDSISAQYPVVDHEFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGI 107
SDS + + P FD +V+G G AG AA + G T +T T Q
Sbjct: 27 SDSAAPRTP----HFDVIVIGGGHAGTEAATAAARCGSRTLLLTHRVDT-----IGQMSC 77
Query: 108 NAALGNMEEDNWRWHFYDTVKGSDWL----GDQDAIHY 141
N + G + + H V D L DQ +HY
Sbjct: 78 NPSFGGI----GKGHLMREVDALDGLCSRICDQSGVHY 111
>gi|91199540 dihydrolipoamide dehydrogenase precursor [Homo
sapiens]
Length = 509
Score = 30.0 bits (66), Expect = 7.1
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 63 DAVVVGAGGAGLRAAFGLSEAGFNTACVTK 92
D V+G+G G AA ++ GF T C+ K
Sbjct: 43 DVTVIGSGPGGYVAAIKAAQLGFKTVCIEK 72
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.136 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,821,099
Number of Sequences: 37866
Number of extensions: 1193382
Number of successful extensions: 2444
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 2435
Number of HSP's gapped (non-prelim): 19
length of query: 664
length of database: 18,247,518
effective HSP length: 109
effective length of query: 555
effective length of database: 14,120,124
effective search space: 7836668820
effective search space used: 7836668820
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.