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Search of human proteins with 15559209
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|15559209 interleukin 33 [Homo sapiens]
(270 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|15559209 interleukin 33 [Homo sapiens] 552 e-157
gi|19923268 protein-kinase, interferon-inducible double stranded... 35 0.090
gi|134304846 Rb1-inducible coiled coil protein 1 isoform 2 [Homo... 33 0.26
gi|134304842 Rb1-inducible coiled coil protein 1 isoform 1 [Homo... 33 0.26
gi|4501987 afamin precursor [Homo sapiens] 32 0.45
gi|55769561 zinc finger protein 21 isoform 2 [Homo sapiens] 31 1.00
gi|55769559 zinc finger protein 21 isoform 1 [Homo sapiens] 31 1.00
gi|226371655 zinc finger family member 674 isoform 2 [Homo sapiens] 30 1.7
gi|89994742 zinc finger family member 674 isoform 1 [Homo sapiens] 30 1.7
gi|189242612 complement component 6 precursor [Homo sapiens] 29 3.8
gi|169636415 complement component 6 precursor [Homo sapiens] 29 3.8
gi|154800449 zinc finger protein 132 [Homo sapiens] 29 3.8
gi|19718741 oxysterol-binding protein-like 1A isoform B [Homo sa... 29 3.8
gi|222831595 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 [Homo sap... 29 3.8
gi|50345870 DENN/MADD domain containing 3 [Homo sapiens] 29 3.8
gi|21359935 Down syndrome cell adhesion molecule like 1 [Homo sa... 29 4.9
gi|7657540 schwannomin interacting protein 1 [Homo sapiens] 29 4.9
gi|94536776 zinc finger, CW type with PWWP domain 2 [Homo sapiens] 29 4.9
gi|146133848 golgi autoantigen, golgin subfamily a, 6 [Homo sapi... 29 4.9
gi|239757482 PREDICTED: hypothetical protein [Homo sapiens] 28 6.5
gi|239751999 PREDICTED: hypothetical protein XP_002348081 [Homo ... 28 6.5
gi|239746484 PREDICTED: hypothetical protein XP_002343759 [Homo ... 28 6.5
gi|4506885 semenogelin II precursor [Homo sapiens] 28 6.5
gi|23097321 zinc finger protein 383 [Homo sapiens] 28 8.4
>gi|15559209 interleukin 33 [Homo sapiens]
Length = 270
Score = 552 bits (1423), Expect = e-157
Identities = 270/270 (100%), Positives = 270/270 (100%)
Query: 1 MKPKMKYSTNKISTAKWKNTASKALCFKLGKSQQKAKEVCPMYFMKLRSGLMIKKEACYF 60
MKPKMKYSTNKISTAKWKNTASKALCFKLGKSQQKAKEVCPMYFMKLRSGLMIKKEACYF
Sbjct: 1 MKPKMKYSTNKISTAKWKNTASKALCFKLGKSQQKAKEVCPMYFMKLRSGLMIKKEACYF 60
Query: 61 RRETTKRPSLKTGRKHKRHLVLAACQQQSTVECFAFGISGVQKYTRALHDSSITGISPIT 120
RRETTKRPSLKTGRKHKRHLVLAACQQQSTVECFAFGISGVQKYTRALHDSSITGISPIT
Sbjct: 61 RRETTKRPSLKTGRKHKRHLVLAACQQQSTVECFAFGISGVQKYTRALHDSSITGISPIT 120
Query: 121 EYLASLSTYNDQSITFALEDESYEIYVEDLKKDEKKDKVLLSYYESQHPSNESGDGVDGK 180
EYLASLSTYNDQSITFALEDESYEIYVEDLKKDEKKDKVLLSYYESQHPSNESGDGVDGK
Sbjct: 121 EYLASLSTYNDQSITFALEDESYEIYVEDLKKDEKKDKVLLSYYESQHPSNESGDGVDGK 180
Query: 181 MLMVTLSPTKDFWLHANNKEHSVELHKCEKPLPDQAFFVLHNMHSNCVSFECKTDPGVFI 240
MLMVTLSPTKDFWLHANNKEHSVELHKCEKPLPDQAFFVLHNMHSNCVSFECKTDPGVFI
Sbjct: 181 MLMVTLSPTKDFWLHANNKEHSVELHKCEKPLPDQAFFVLHNMHSNCVSFECKTDPGVFI 240
Query: 241 GVKDNHLALIKVDSSENLCTENILFKLSET 270
GVKDNHLALIKVDSSENLCTENILFKLSET
Sbjct: 241 GVKDNHLALIKVDSSENLCTENILFKLSET 270
>gi|19923268 protein-kinase, interferon-inducible double stranded
RNA dependent inhibitor, repressor of (P58 repressor)
[Homo sapiens]
Length = 761
Score = 34.7 bits (78), Expect = 0.090
Identities = 33/129 (25%), Positives = 60/129 (46%), Gaps = 12/129 (9%)
Query: 63 ETTKRPSL--KTGRKHKRHLVLAACQQQSTVECFAFGISGVQKYTRALHDSSITGISPIT 120
E +R L KT + +H L A ++++ C Y L D++I I +T
Sbjct: 36 ENCRRADLEDKTPDQLNKHYRLCAKHFETSMIC------RTSPYRTVLRDNAIPTIFDLT 89
Query: 121 EYLASLSTYNDQSITFALEDESYEIY---VEDLKKDEKKDKVLLSYYESQHPSNESGDGV 177
+L + + + + I EDE + +++ + E+K K + +Q+PS E G+G
Sbjct: 90 SHLNNPHSRHRKRIKELSEDEIRTLKQKKIDETSEQEQKHKET-NNSNAQNPSEEEGEGQ 148
Query: 178 DGKMLMVTL 186
D +L +TL
Sbjct: 149 DEDILPLTL 157
>gi|134304846 Rb1-inducible coiled coil protein 1 isoform 2 [Homo
sapiens]
Length = 1591
Score = 33.1 bits (74), Expect = 0.26
Identities = 43/185 (23%), Positives = 79/185 (42%), Gaps = 30/185 (16%)
Query: 28 KLGKSQQKAKEVCPMYFMKLRSGLMIKKEACYFRRETTKRPSLKTGRKHKRHLVLAACQQ 87
KL + Q E + +LR+ + I+K+ C L + + + +++ A +
Sbjct: 1106 KLNQKIQDNNENYQVGLAELRTLMTIEKDQCI--------SELISRHEEESNILKAELNK 1157
Query: 88 QSTVECFAFGISGVQKYTRALHDSSITGISPITEYLASLSTYNDQSITFALEDESYEIYV 147
+++ AF I + L + I S + L++L D+ IT ++E YE +
Sbjct: 1158 VTSLHNQAFEIE------KNLKEQIIELQSKLDSELSALERQKDEKIT--QQEEKYEAII 1209
Query: 148 EDLKKDEKKDKVLLSYYESQHPSNESGDGVDGKMLMVTLSPTKDFWLHANNKEHSVELHK 207
++L+KD +K L+S E D + L+ L+ KD + KE +E
Sbjct: 1210 QNLEKDRQK---LVSSQEQ-----------DREQLIQKLNCEKDEAIQTALKEFKLEREV 1255
Query: 208 CEKPL 212
EK L
Sbjct: 1256 VEKEL 1260
>gi|134304842 Rb1-inducible coiled coil protein 1 isoform 1 [Homo
sapiens]
Length = 1594
Score = 33.1 bits (74), Expect = 0.26
Identities = 43/185 (23%), Positives = 79/185 (42%), Gaps = 30/185 (16%)
Query: 28 KLGKSQQKAKEVCPMYFMKLRSGLMIKKEACYFRRETTKRPSLKTGRKHKRHLVLAACQQ 87
KL + Q E + +LR+ + I+K+ C L + + + +++ A +
Sbjct: 1106 KLNQKIQDNNENYQVGLAELRTLMTIEKDQCI--------SELISRHEEESNILKAELNK 1157
Query: 88 QSTVECFAFGISGVQKYTRALHDSSITGISPITEYLASLSTYNDQSITFALEDESYEIYV 147
+++ AF I + L + I S + L++L D+ IT ++E YE +
Sbjct: 1158 VTSLHNQAFEIE------KNLKEQIIELQSKLDSELSALERQKDEKIT--QQEEKYEAII 1209
Query: 148 EDLKKDEKKDKVLLSYYESQHPSNESGDGVDGKMLMVTLSPTKDFWLHANNKEHSVELHK 207
++L+KD +K L+S E D + L+ L+ KD + KE +E
Sbjct: 1210 QNLEKDRQK---LVSSQEQ-----------DREQLIQKLNCEKDEAIQTALKEFKLEREV 1255
Query: 208 CEKPL 212
EK L
Sbjct: 1256 VEKEL 1260
>gi|4501987 afamin precursor [Homo sapiens]
Length = 599
Score = 32.3 bits (72), Expect = 0.45
Identities = 48/202 (23%), Positives = 78/202 (38%), Gaps = 43/202 (21%)
Query: 68 PSLKTGRKHKRHLVLAACQQQSTVECFAFGISGVQKYTRALHDSSITGISPITEYLASLS 127
P+L T H + + C++Q+ V C TRA+ P+T+YL + S
Sbjct: 176 PTLLTVAVHFEEVAKSCCEEQNKVNCL---------QTRAI---------PVTQYLKAFS 217
Query: 128 TYNDQSITFALEDES---YEIYVEDLKKDEKK--DKVLLSYYESQHPSNESGDGVDGKML 182
+Y L+ + + IY+ L + K K L+S E + + DG +
Sbjct: 218 SYQKHVCGALLKFGTKVVHFIYIAILSQKFPKIEFKELISLVED---VSSNYDGCCEGDV 274
Query: 183 MVTLSPTKDFWLHANNKEHSVE---LHKCEKPLPDQAFFVLHNMHSNCVSFECKTDPGVF 239
+ + T H +K+ S+ CEK +P++ C+ K D
Sbjct: 275 VQCIRDTSKVMNHICSKQDSISSKIKECCEKKIPER---------GQCIINSNKDD---- 321
Query: 240 IGVKDNHLALIKVDSSENLCTE 261
KD L K SEN+C E
Sbjct: 322 -RPKDLSLREGKFTDSENVCQE 342
>gi|55769561 zinc finger protein 21 isoform 2 [Homo sapiens]
Length = 620
Score = 31.2 bits (69), Expect = 1.00
Identities = 38/157 (24%), Positives = 66/157 (42%), Gaps = 23/157 (14%)
Query: 88 QSTVECFAFGISGVQKYTRALHDSSITGISPITEYLASLSTYNDQSITFALEDESYEIYV 147
+ T EC G S +QK +H S+ TG P E T++D+S T + ++
Sbjct: 324 EKTYECTKCGESFIQKLDLIIHHSTHTGKKP-HECNECKKTFSDKS-TLIIHQRTH---- 377
Query: 148 EDLKKDEKKDKVLLSYYESQ----HPSNESGD-----GVDGKMLMVTLSPTKDFWLH--A 196
+K K + S+ E H +G+ V GK T + + +H
Sbjct: 378 -TGEKPHKCTECGKSFNEKSTLIVHQRTHTGEKPYECDVCGK----TFTQKSNLGVHQRT 432
Query: 197 NNKEHSVELHKCEKPLPDQAFFVLHNM-HSNCVSFEC 232
++ E E ++CEK +++ +LH H+ +EC
Sbjct: 433 HSGEKPFECNECEKAFSQKSYLMLHQRGHTGEKPYEC 469
>gi|55769559 zinc finger protein 21 isoform 1 [Homo sapiens]
Length = 639
Score = 31.2 bits (69), Expect = 1.00
Identities = 38/157 (24%), Positives = 66/157 (42%), Gaps = 23/157 (14%)
Query: 88 QSTVECFAFGISGVQKYTRALHDSSITGISPITEYLASLSTYNDQSITFALEDESYEIYV 147
+ T EC G S +QK +H S+ TG P E T++D+S T + ++
Sbjct: 343 EKTYECTKCGESFIQKLDLIIHHSTHTGKKP-HECNECKKTFSDKS-TLIIHQRTH---- 396
Query: 148 EDLKKDEKKDKVLLSYYESQ----HPSNESGD-----GVDGKMLMVTLSPTKDFWLH--A 196
+K K + S+ E H +G+ V GK T + + +H
Sbjct: 397 -TGEKPHKCTECGKSFNEKSTLIVHQRTHTGEKPYECDVCGK----TFTQKSNLGVHQRT 451
Query: 197 NNKEHSVELHKCEKPLPDQAFFVLHNM-HSNCVSFEC 232
++ E E ++CEK +++ +LH H+ +EC
Sbjct: 452 HSGEKPFECNECEKAFSQKSYLMLHQRGHTGEKPYEC 488
>gi|226371655 zinc finger family member 674 isoform 2 [Homo sapiens]
Length = 575
Score = 30.4 bits (67), Expect = 1.7
Identities = 39/159 (24%), Positives = 61/159 (38%), Gaps = 10/159 (6%)
Query: 92 ECFAFGISGVQKYTRALHDSSITGISPITEYLASLSTYNDQSITFALEDESYEIYVEDLK 151
EC G + +QK T H + TG P ++ +S + E I K
Sbjct: 275 ECSECGKTFIQKSTLIKHQRTHTGEKP---FVCDKCPKAFKSSYHLIRHEKTHIRQAFYK 331
Query: 152 KDEKKDKVLLSYYESQHPSNESGDGVDGKMLMVTLSPTKDFWLHANNKEHSVELHKCEKP 211
+ L+ Y+ H S + GK SPTK + H KE+ E KC K
Sbjct: 332 GIKCTTSSLI--YQRIHTSEKPQCSEHGKASDEKPSPTKHWRTH--TKENIYECSKCGKS 387
Query: 212 LPDQAFFVLH-NMHSNCVSFECKTDPGVFIGVKDNHLAL 249
++ +H +H+ +EC F G +HL++
Sbjct: 388 FRGKSHLSVHQRIHTGEKPYECSICGKTFSG--KSHLSV 424
>gi|89994742 zinc finger family member 674 isoform 1 [Homo sapiens]
Length = 581
Score = 30.4 bits (67), Expect = 1.7
Identities = 39/159 (24%), Positives = 61/159 (38%), Gaps = 10/159 (6%)
Query: 92 ECFAFGISGVQKYTRALHDSSITGISPITEYLASLSTYNDQSITFALEDESYEIYVEDLK 151
EC G + +QK T H + TG P ++ +S + E I K
Sbjct: 281 ECSECGKTFIQKSTLIKHQRTHTGEKP---FVCDKCPKAFKSSYHLIRHEKTHIRQAFYK 337
Query: 152 KDEKKDKVLLSYYESQHPSNESGDGVDGKMLMVTLSPTKDFWLHANNKEHSVELHKCEKP 211
+ L+ Y+ H S + GK SPTK + H KE+ E KC K
Sbjct: 338 GIKCTTSSLI--YQRIHTSEKPQCSEHGKASDEKPSPTKHWRTH--TKENIYECSKCGKS 393
Query: 212 LPDQAFFVLH-NMHSNCVSFECKTDPGVFIGVKDNHLAL 249
++ +H +H+ +EC F G +HL++
Sbjct: 394 FRGKSHLSVHQRIHTGEKPYECSICGKTFSG--KSHLSV 430
>gi|189242612 complement component 6 precursor [Homo sapiens]
Length = 934
Score = 29.3 bits (64), Expect = 3.8
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Query: 110 DSSITGISPITEYLASLSTYNDQSITFALEDESYEIYV--EDLKKDEKKDKVLLSYYESQ 167
D+S TG I + + S T N + LE+ +E+ +DLK D KD L + E+Q
Sbjct: 210 DNSFTG--GICKTVKSSRTSNPYRVPANLENVGFEVQTAEDDLKTDFYKDLTSLGHNENQ 267
Query: 168 HPSNESGDG 176
S S G
Sbjct: 268 QGSFSSQGG 276
>gi|169636415 complement component 6 precursor [Homo sapiens]
Length = 934
Score = 29.3 bits (64), Expect = 3.8
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Query: 110 DSSITGISPITEYLASLSTYNDQSITFALEDESYEIYV--EDLKKDEKKDKVLLSYYESQ 167
D+S TG I + + S T N + LE+ +E+ +DLK D KD L + E+Q
Sbjct: 210 DNSFTG--GICKTVKSSRTSNPYRVPANLENVGFEVQTAEDDLKTDFYKDLTSLGHNENQ 267
Query: 168 HPSNESGDG 176
S S G
Sbjct: 268 QGSFSSQGG 276
>gi|154800449 zinc finger protein 132 [Homo sapiens]
Length = 706
Score = 29.3 bits (64), Expect = 3.8
Identities = 28/93 (30%), Positives = 38/93 (40%), Gaps = 16/93 (17%)
Query: 190 KDFWLHANNKEHSVELHKCEKPL----PDQAFFVLHNMHSNCVSFECKTDPGVFIGVKDN 245
+DFWL+AN +H E H KP A +H + F C+ V +G D
Sbjct: 149 RDFWLNANLHQHQKE-HSGGKPFRWYKDRDALMKSSKVHLSENPFTCREGGKVILGSCD- 206
Query: 246 HLALIKVDSSE----------NLCTENILFKLS 268
L L VDS + +CT LF+ S
Sbjct: 207 LLQLQAVDSGQKPYSNLGQLPEVCTTQKLFECS 239
>gi|19718741 oxysterol-binding protein-like 1A isoform B [Homo
sapiens]
Length = 950
Score = 29.3 bits (64), Expect = 3.8
Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 7/89 (7%)
Query: 74 RKHKRHLVLAACQQQST------VECFAFGISGVQKYTRALHDSSITGISPITEYLASLS 127
R+ +HL A C +ST ++CF I G + +L S + I E+ A +
Sbjct: 278 RQGCKHLTQAVCTVKSTDSCLFFIKCFDDTIHGFRVPKNSLQQSREDWLEAIEEHSAYST 337
Query: 128 TYNDQSITFALEDESYEIYVEDLKKDEKK 156
Y Q E+E + DLKK +K
Sbjct: 338 HYCSQD-QLTDEEEEDTVSAADLKKSLEK 365
>gi|222831595 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 [Homo sapiens]
Length = 1712
Score = 29.3 bits (64), Expect = 3.8
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 27 FKLGKSQQKAKEVCPMYFMKLRSGLMIKKEACYFRRETTKRPS---LKTGRKHKRHLVL 82
F++ KS +A+E+CP F+ + L+IKK E+ K +K G + +VL
Sbjct: 1038 FQIWKSWPRAQELCPENFIHFNNKLVIKKMDARKYEESLKAELTSWIKNGNVEQARMVL 1096
>gi|50345870 DENN/MADD domain containing 3 [Homo sapiens]
Length = 1198
Score = 29.3 bits (64), Expect = 3.8
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Query: 182 LMVTLSPTKDFWLHANNKEHSVELHKCEKPLPDQAFFVLHNMHSNCVSFECKTDPGVFIG 241
L+ L P KDF + ++ K+ + +L P P V NM S + + DP I
Sbjct: 129 LLALLKPCKDFEVDSHIKDFAAKLSLIPSPPPGPLHLVF-NMKSLQIVLPARADPESPIL 187
Query: 242 VKDNHLALI 250
D HL L+
Sbjct: 188 DLDLHLPLL 196
>gi|21359935 Down syndrome cell adhesion molecule like 1 [Homo
sapiens]
Length = 2113
Score = 28.9 bits (63), Expect = 4.9
Identities = 22/94 (23%), Positives = 40/94 (42%), Gaps = 12/94 (12%)
Query: 169 PSNESGDGVDGKMLMVTLS-----PTKDFWLHANN-----KEHSVELHKCEKPLPDQAFF 218
P+N+ DG+ GK ++ S P K W HA + H V L + LP+ +
Sbjct: 756 PNNQ--DGIYGKAGVLNCSVDGYPPPKVMWKHAKGSGNPQQYHPVPLTGRIQILPNSSLL 813
Query: 219 VLHNMHSNCVSFECKTDPGVFIGVKDNHLALIKV 252
+ H + + + C+ GV + + +K+
Sbjct: 814 IRHVLEEDIGYYLCQASNGVGTDISKSMFLTVKI 847
>gi|7657540 schwannomin interacting protein 1 [Homo sapiens]
Length = 487
Score = 28.9 bits (63), Expect = 4.9
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 13/84 (15%)
Query: 105 TRALHDSSITGISPITEYLASLSTYNDQSITFALED--ESYEIY----------VEDLKK 152
+RA S+ T ++P +E +S S + ALED E + +Y ED ++
Sbjct: 41 SRASSQSNSTKVTPCSECKSSSSPGGSLDLVSALEDYEEPFPVYQKKVIDEWAPEEDGEE 100
Query: 153 DEKKD-KVLLSYYESQHPSNESGD 175
+E++D + Y + + P+ E GD
Sbjct: 101 EEEEDERDQRGYRDDRSPAREPGD 124
>gi|94536776 zinc finger, CW type with PWWP domain 2 [Homo sapiens]
Length = 356
Score = 28.9 bits (63), Expect = 4.9
Identities = 32/148 (21%), Positives = 60/148 (40%), Gaps = 19/148 (12%)
Query: 16 KWKNTASKALCFKLGKSQQKAKEVCPMYFMKLRSGLMIKKEACYFRRETTKRPSLKTG-- 73
KW +A + C G S ++ E+C + ++ +S K A +R+ T + +++
Sbjct: 173 KWYKSALQEACLLYGYSHEQRLEMCCLSKLQDKSETHDKVAALVKKRKQTSKNNIEKKKP 232
Query: 74 --RKHKRHLVLAACQQQSTVECFAFGISGVQKYTRALHDSSITGISPITEYLASLSTYND 131
RK KR +L + + + K R + ++ + L L
Sbjct: 233 KFRKRKRKAILKCSFEN------VYSDDALSKENRVVCETEV--------LLKELEQMLQ 278
Query: 132 QSI-TFALEDESYEIYVEDLKKDEKKDK 158
Q++ A DES E + E++ EK K
Sbjct: 279 QALQPTATPDESEEGHGEEINMGEKLSK 306
>gi|146133848 golgi autoantigen, golgin subfamily a, 6 [Homo
sapiens]
Length = 693
Score = 28.9 bits (63), Expect = 4.9
Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 1/92 (1%)
Query: 41 PMYFMKLRSGLMIKKEACYFRRETTKRPSLKTGRKHKRHLVLAACQQQSTVECFAFGISG 100
PM + R + + + K P + G K K+ ++ + ++ C + G S
Sbjct: 11 PMMLEESRQNKLAAAKKKLKEYQQRKSPGIPAGAKTKKKKTDSSPETTTSGGCHSPGDSQ 70
Query: 101 VQKYTRALHDSSITGISPITEYLASLSTYNDQ 132
Q+ AL SS+T IS + E + SL Q
Sbjct: 71 YQELAVALESSSVT-ISQLNENIESLKQQKKQ 101
>gi|239757482 PREDICTED: hypothetical protein [Homo sapiens]
Length = 135
Score = 28.5 bits (62), Expect = 6.5
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Query: 29 LGKSQQKAKEVCPMYFMKLRSGLMIKKEACYFRRETTKRPSLKTGRKHKRHLVLAA 84
LGK ++CP+ + SG + ++E +F+R SL G + K HL+ A
Sbjct: 11 LGKQGAAVSQLCPLVLV---SGHICREERRHFQRIALTASSLSCGSQLKWHLLQEA 63
>gi|239751999 PREDICTED: hypothetical protein XP_002348081 [Homo
sapiens]
Length = 135
Score = 28.5 bits (62), Expect = 6.5
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Query: 29 LGKSQQKAKEVCPMYFMKLRSGLMIKKEACYFRRETTKRPSLKTGRKHKRHLVLAA 84
LGK ++CP+ + SG + ++E +F+R SL G + K HL+ A
Sbjct: 11 LGKQGAAVSQLCPLVLV---SGHICREERRHFQRIALTASSLSCGSQLKWHLLQEA 63
>gi|239746484 PREDICTED: hypothetical protein XP_002343759 [Homo
sapiens]
Length = 135
Score = 28.5 bits (62), Expect = 6.5
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Query: 29 LGKSQQKAKEVCPMYFMKLRSGLMIKKEACYFRRETTKRPSLKTGRKHKRHLVLAA 84
LGK ++CP+ + SG + ++E +F+R SL G + K HL+ A
Sbjct: 11 LGKQGAAVSQLCPLVLV---SGHICREERRHFQRIALTASSLSCGSQLKWHLLQEA 63
>gi|4506885 semenogelin II precursor [Homo sapiens]
Length = 582
Score = 28.5 bits (62), Expect = 6.5
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 162 SYYESQHPSNESGDGVDGKMLMVTLSPT-KDFWLHANNKEHS 202
+++ +Q+PS + G+ GK L S T K W+H +KE +
Sbjct: 135 AHHGTQNPSQDQGNSPSGKGLSSQCSNTEKRLWVHGLSKEQA 176
>gi|23097321 zinc finger protein 383 [Homo sapiens]
Length = 475
Score = 28.1 bits (61), Expect = 8.4
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Query: 197 NNKEHSVELHKCEKPLPDQAFFVLH-NMHSNCVSFECKTDPGVFIGVKDNHLALIKVDSS 255
NN++ E KC K + F+ H +H S+ECK + G F + +K+ +
Sbjct: 164 NNEDRPYECKKCGKAFSQNSQFIQHQRIHIGEKSYECK-ECGKFFSCGSHVTRHLKIHTG 222
Query: 256 E 256
E
Sbjct: 223 E 223
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.130 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,014,316
Number of Sequences: 37866
Number of extensions: 423893
Number of successful extensions: 1174
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 1162
Number of HSP's gapped (non-prelim): 32
length of query: 270
length of database: 18,247,518
effective HSP length: 101
effective length of query: 169
effective length of database: 14,423,052
effective search space: 2437495788
effective search space used: 2437495788
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.