Guide to the Human Genome
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Name: IL33 Sequence: fasta or formatted (270aa) NCBI GI: 15559209
Description:

interleukin 33

Referenced in:

Interleukins and Their Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         14           2
 C cysteine            3.3          9           1
 D aspartate           4.8         13           1
 E glutamate           7.0         19           1
 F phenylalanine       4.4         12           2
 G glycine             4.1         11           1
 H histidine           3.7         10           1
 I isoleucine          4.1         11           1
 K lysine             12.2         33           2
 L leucine             9.3         25           2
 M methionine          3.0          8           1
 N asparagine          4.1         11           2
 P proline             3.3          9           1
 Q glutamine           3.3          9           3
 R arginine            2.6          7           2
 S serine              9.6         26           2
 T threonine           6.3         17           2
 V valine              5.2         14           1
 W tryptophan          0.7          2           1
 Y tyrosine            3.7         10           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   interleukin 33 
PRKRIR                0.019   protein-kinase, interferon-inducible double stranded...
RB1CC1                0.015   Rb1-inducible coiled coil protein 1 isoform 2 [Homo...
RB1CC1                0.015   Rb1-inducible coiled coil protein 1 isoform 1 [Homo...
AFM                   0.013   afamin precursor 
ZNF182                0.011   zinc finger protein 21 isoform 2 
ZNF182                0.011   zinc finger protein 21 isoform 1 
ZNF674                0.009   zinc finger family member 674 isoform 2 
ZNF674                0.009   zinc finger family member 674 isoform 1 
C6                    0.008   complement component 6 precursor 
C6                    0.008   complement component 6 precursor 
ZNF132                0.008   zinc finger protein 132 
OSBPL1A               0.008   oxysterol-binding protein-like 1A isoform B 
DDX60                 0.008   DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 
DENND3                0.008   DENN/MADD domain containing 3 
DSCAML1               0.008   Down syndrome cell adhesion molecule like 1 
SCHIP1                0.008   schwannomin interacting protein 1 
ZCWPW2                0.008   zinc finger, CW type with PWWP domain 2 
GOLGA6                0.008   golgi autoantigen, golgin subfamily a, 6 
LOC100292176          0.006   PREDICTED: hypothetical protein 
LOC100291396          0.006   PREDICTED: hypothetical protein XP_002348081 
LOC100287792          0.006   PREDICTED: hypothetical protein XP_002343759 
SEMG2                 0.006   semenogelin II precursor 
ZNF383                0.006   zinc finger protein 383 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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