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Search of human proteins with 15529984
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|15529984 armadillo repeat containing 6 [Homo sapiens]
(476 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|15529984 armadillo repeat containing 6 [Homo sapiens] 941 0.0
gi|28875784 armadillo repeat containing 5 isoform b [Homo sapiens] 40 0.005
gi|157426856 armadillo repeat containing 5 isoform a [Homo sapiens] 40 0.005
gi|155030194 RAP1, GTP-GDP dissociation stimulator 1 isoform 2 [... 39 0.010
gi|155030202 RAP1, GTP-GDP dissociation stimulator 1 isoform 6 [... 37 0.051
gi|155030200 RAP1, GTP-GDP dissociation stimulator 1 isoform 5 [... 37 0.051
gi|155030198 RAP1, GTP-GDP dissociation stimulator 1 isoform 4 [... 37 0.051
gi|155030196 RAP1, GTP-GDP dissociation stimulator 1 isoform 3 [... 37 0.051
gi|155030192 RAP1, GTP-GDP dissociation stimulator 1 isoform 1 [... 37 0.051
gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens] 37 0.051
gi|6912678 sperm associated antigen 6 isoform 1 [Homo sapiens] 36 0.087
gi|27262641 sperm associated antigen 6 isoform 2 [Homo sapiens] 36 0.087
gi|4502247 armadillo repeat protein [Homo sapiens] 35 0.19
gi|224282119 splicing factor, arginine/serine-rich 14 [Homo sapi... 34 0.25
gi|224282117 splicing factor, arginine/serine-rich 14 [Homo sapi... 34 0.25
gi|33589814 zyg-11 homolog B (C. elegans)-like [Homo sapiens] 34 0.33
gi|146231975 catenin, delta 1 isoform 3A [Homo sapiens] 33 0.43
gi|146231948 catenin, delta 1 isoform 3A [Homo sapiens] 33 0.43
gi|146231994 catenin, delta 1 isoform 3A [Homo sapiens] 33 0.43
gi|146231977 catenin, delta 1 isoform 3AC [Homo sapiens] 33 0.43
gi|146231946 catenin, delta 1 isoform 3B [Homo sapiens] 33 0.43
gi|146231991 catenin, delta 1 isoform 3AB [Homo sapiens] 33 0.43
gi|146231970 catenin, delta 1 isoform 3ABC [Homo sapiens] 33 0.43
gi|146231942 catenin, delta 1 isoform 1A [Homo sapiens] 33 0.43
gi|146231968 catenin, delta 1 isoform 1A [Homo sapiens] 33 0.43
gi|146231938 catenin, delta 1 isoform 1A [Homo sapiens] 33 0.43
gi|10835010 catenin, delta 1 isoform 1B [Homo sapiens] 33 0.43
gi|146231962 catenin, delta 1 isoform 1AB [Homo sapiens] 33 0.43
gi|146231940 catenin, delta 1 isoform 1ABC [Homo sapiens] 33 0.43
gi|148762963 armadillo repeat containing 2 [Homo sapiens] 33 0.43
>gi|15529984 armadillo repeat containing 6 [Homo sapiens]
Length = 476
Score = 941 bits (2432), Expect = 0.0
Identities = 476/476 (100%), Positives = 476/476 (100%)
Query: 1 MVSKRIAQETFDAAVRENIEEFAMGPEEAVKEAVEQFESQGVDLSNIVKTAPKVSADGSQ 60
MVSKRIAQETFDAAVRENIEEFAMGPEEAVKEAVEQFESQGVDLSNIVKTAPKVSADGSQ
Sbjct: 1 MVSKRIAQETFDAAVRENIEEFAMGPEEAVKEAVEQFESQGVDLSNIVKTAPKVSADGSQ 60
Query: 61 EPTHDILQMLSDLQESVASSRPQEVSAYLTRFCDQCKQDKACRFLAAQKGAYPIIFTAWK 120
EPTHDILQMLSDLQESVASSRPQEVSAYLTRFCDQCKQDKACRFLAAQKGAYPIIFTAWK
Sbjct: 61 EPTHDILQMLSDLQESVASSRPQEVSAYLTRFCDQCKQDKACRFLAAQKGAYPIIFTAWK 120
Query: 121 LATAGDQGLLLQSLNALSVLTDGQPDLLDAQGLQLLVATLTQNADEADLTCSGIRCVRHA 180
LATAGDQGLLLQSLNALSVLTDGQPDLLDAQGLQLLVATLTQNADEADLTCSGIRCVRHA
Sbjct: 121 LATAGDQGLLLQSLNALSVLTDGQPDLLDAQGLQLLVATLTQNADEADLTCSGIRCVRHA 180
Query: 181 CLKHEQNRQDLVKAGVLPLLTGAITHHGHHTDVVREACWALRVMTFDDDIRVPFGHAHNH 240
CLKHEQNRQDLVKAGVLPLLTGAITHHGHHTDVVREACWALRVMTFDDDIRVPFGHAHNH
Sbjct: 181 CLKHEQNRQDLVKAGVLPLLTGAITHHGHHTDVVREACWALRVMTFDDDIRVPFGHAHNH 240
Query: 241 AKMIVQENKGLKVLIEATKAFLDNPGILSELCGTLSRLAIRNEFCQEVVDLGGLSILVSL 300
AKMIVQENKGLKVLIEATKAFLDNPGILSELCGTLSRLAIRNEFCQEVVDLGGLSILVSL
Sbjct: 241 AKMIVQENKGLKVLIEATKAFLDNPGILSELCGTLSRLAIRNEFCQEVVDLGGLSILVSL 300
Query: 301 LADCNDHQMRDQSGVQELVKQVLSTLRAIAGNDDVKDAIVRAGGTESIVAAMTQHLTSPQ 360
LADCNDHQMRDQSGVQELVKQVLSTLRAIAGNDDVKDAIVRAGGTESIVAAMTQHLTSPQ
Sbjct: 301 LADCNDHQMRDQSGVQELVKQVLSTLRAIAGNDDVKDAIVRAGGTESIVAAMTQHLTSPQ 360
Query: 361 VCEQSCAALCFLALRKPDNSRIIVEGGGAVAALQAMKAHPQKAGVQKQACMLIRNLVAHG 420
VCEQSCAALCFLALRKPDNSRIIVEGGGAVAALQAMKAHPQKAGVQKQACMLIRNLVAHG
Sbjct: 361 VCEQSCAALCFLALRKPDNSRIIVEGGGAVAALQAMKAHPQKAGVQKQACMLIRNLVAHG 420
Query: 421 QAFSKPILDLGAEALIMQARSAHRDCEDVAKAALRDLGCHVELRELWTGQRGNLAP 476
QAFSKPILDLGAEALIMQARSAHRDCEDVAKAALRDLGCHVELRELWTGQRGNLAP
Sbjct: 421 QAFSKPILDLGAEALIMQARSAHRDCEDVAKAALRDLGCHVELRELWTGQRGNLAP 476
>gi|28875784 armadillo repeat containing 5 isoform b [Homo sapiens]
Length = 725
Score = 40.0 bits (92), Expect = 0.005
Identities = 42/171 (24%), Positives = 73/171 (42%), Gaps = 21/171 (12%)
Query: 275 LSRLAIRNEFCQEVVDLGGLSILVSLLADCNDHQMRDQSGVQELVKQVLSTLRAIAGNDD 334
L LA+ E C ++ G + +LV L C D Q ++ V+ LR +A +
Sbjct: 178 LGNLAMEPESCGDIHCAGAVPLLVESLTACQDSQ---------CLQSVVRALRNLADSPQ 228
Query: 335 VKDAIVRAGGTESIVAAMTQHLTSPQVCEQSCAALCFLALRKPDNSRIIVEG---GGAVA 391
+ A+ + G + + T+P L L + SR E GG +
Sbjct: 229 HRLALAQQGAVRPLAELLA---TAPDAALTLALVRALLELSR-GCSRACAEQLSLGGGLG 284
Query: 392 ALQAMKAHPQKAGVQKQACMLIRNLVAHGQAFSKPILDL--GAEALIMQAR 440
L ++ +HP++A V++ +++ NL A G +P L G E L+ + R
Sbjct: 285 PLVSLASHPKRA-VREGTILILANLCAQG--LIRPALGNAGGVEVLVDELR 332
>gi|157426856 armadillo repeat containing 5 isoform a [Homo sapiens]
Length = 935
Score = 40.0 bits (92), Expect = 0.005
Identities = 42/171 (24%), Positives = 73/171 (42%), Gaps = 21/171 (12%)
Query: 275 LSRLAIRNEFCQEVVDLGGLSILVSLLADCNDHQMRDQSGVQELVKQVLSTLRAIAGNDD 334
L LA+ E C ++ G + +LV L C D Q ++ V+ LR +A +
Sbjct: 178 LGNLAMEPESCGDIHCAGAVPLLVESLTACQDSQ---------CLQSVVRALRNLADSPQ 228
Query: 335 VKDAIVRAGGTESIVAAMTQHLTSPQVCEQSCAALCFLALRKPDNSRIIVEG---GGAVA 391
+ A+ + G + + T+P L L + SR E GG +
Sbjct: 229 HRLALAQQGAVRPLAELLA---TAPDAALTLALVRALLELSR-GCSRACAEQLSLGGGLG 284
Query: 392 ALQAMKAHPQKAGVQKQACMLIRNLVAHGQAFSKPILDL--GAEALIMQAR 440
L ++ +HP++A V++ +++ NL A G +P L G E L+ + R
Sbjct: 285 PLVSLASHPKRA-VREGTILILANLCAQG--LIRPALGNAGGVEVLVDELR 332
>gi|155030194 RAP1, GTP-GDP dissociation stimulator 1 isoform 2
[Homo sapiens]
Length = 607
Score = 38.9 bits (89), Expect = 0.010
Identities = 56/228 (24%), Positives = 97/228 (42%), Gaps = 13/228 (5%)
Query: 239 NHAKMIVQENKGLKV-LIEATKAFLDN--PGILSELCGTLSRLAIRNEFCQEVVDLGGLS 295
N A ++ + K L + EA FL + P + +L GTL L E ++ LG
Sbjct: 388 NLAIPVINKAKMLSAGVTEAVLKFLKSEMPPVQFKLLGTLRMLIDAQEAAEQ---LGKNV 444
Query: 296 ILVSLLAD-CNDHQMRDQSGVQELVKQVLSTLRAIAGNDDVKDAIVRAGGTESIVAAMTQ 354
LV L + C + +D +GV ++LS L + + DV IV++GG + +V T
Sbjct: 445 KLVERLVEWC---EAKDHAGVMGESNRLLSALIRHSKSKDVIKTIVQSGGIKHLVTMATS 501
Query: 355 HLTSPQVCEQSCAALCFLALRKPDNSRIIVEGGGAVAALQAMKAHPQKAGVQKQACMLIR 414
Q ++ AL +A + + +E V L + A + A K M++
Sbjct: 502 EHVIMQ--NEALVALALIAALELGTAEKDLESAKLVQILHRLLADERSAPEIKYNSMVLI 559
Query: 415 NLVAHGQAFSKPILDLGAEALIMQARSAHRDCEDVAKAALRDLGCHVE 462
+ + K + DL ++ + RS H + +A+L + VE
Sbjct: 560 CALMGSECLHKEVQDLAFLDVVSKLRS-HENKSVAQQASLTEQRLTVE 606
>gi|155030202 RAP1, GTP-GDP dissociation stimulator 1 isoform 6
[Homo sapiens]
Length = 516
Score = 36.6 bits (83), Expect = 0.051
Identities = 56/228 (24%), Positives = 95/228 (41%), Gaps = 12/228 (5%)
Query: 239 NHAKMIVQENKGLKV-LIEATKAFLDN--PGILSELCGTLSRLAIRNEFCQEVVDLGGLS 295
N A ++ + K L + EA FL + P + +L GTL L E LG
Sbjct: 296 NLAIPVINKAKMLSAGVTEAVLKFLKSEMPPVQFKLLGTLRMLIDAQAEAAE--QLGKNV 353
Query: 296 ILVSLLAD-CNDHQMRDQSGVQELVKQVLSTLRAIAGNDDVKDAIVRAGGTESIVAAMTQ 354
LV L + C + +D +GV ++LS L + + DV IV++GG + +V T
Sbjct: 354 KLVERLVEWC---EAKDHAGVMGESNRLLSALIRHSKSKDVIKTIVQSGGIKHLVTMATS 410
Query: 355 HLTSPQVCEQSCAALCFLALRKPDNSRIIVEGGGAVAALQAMKAHPQKAGVQKQACMLIR 414
Q ++ AL +A + + +E V L + A + A K M++
Sbjct: 411 EHVIMQ--NEALVALALIAALELGTAEKDLESAKLVQILHRLLADERSAPEIKYNSMVLI 468
Query: 415 NLVAHGQAFSKPILDLGAEALIMQARSAHRDCEDVAKAALRDLGCHVE 462
+ + K + DL ++ + RS H + +A+L + VE
Sbjct: 469 CALMGSECLHKEVQDLAFLDVVSKLRS-HENKSVAQQASLTEQRLTVE 515
>gi|155030200 RAP1, GTP-GDP dissociation stimulator 1 isoform 5
[Homo sapiens]
Length = 558
Score = 36.6 bits (83), Expect = 0.051
Identities = 56/228 (24%), Positives = 95/228 (41%), Gaps = 12/228 (5%)
Query: 239 NHAKMIVQENKGLKV-LIEATKAFLDN--PGILSELCGTLSRLAIRNEFCQEVVDLGGLS 295
N A ++ + K L + EA FL + P + +L GTL L E LG
Sbjct: 338 NLAIPVINKAKMLSAGVTEAVLKFLKSEMPPVQFKLLGTLRMLIDAQAEAAE--QLGKNV 395
Query: 296 ILVSLLAD-CNDHQMRDQSGVQELVKQVLSTLRAIAGNDDVKDAIVRAGGTESIVAAMTQ 354
LV L + C + +D +GV ++LS L + + DV IV++GG + +V T
Sbjct: 396 KLVERLVEWC---EAKDHAGVMGESNRLLSALIRHSKSKDVIKTIVQSGGIKHLVTMATS 452
Query: 355 HLTSPQVCEQSCAALCFLALRKPDNSRIIVEGGGAVAALQAMKAHPQKAGVQKQACMLIR 414
Q ++ AL +A + + +E V L + A + A K M++
Sbjct: 453 EHVIMQ--NEALVALALIAALELGTAEKDLESAKLVQILHRLLADERSAPEIKYNSMVLI 510
Query: 415 NLVAHGQAFSKPILDLGAEALIMQARSAHRDCEDVAKAALRDLGCHVE 462
+ + K + DL ++ + RS H + +A+L + VE
Sbjct: 511 CALMGSECLHKEVQDLAFLDVVSKLRS-HENKSVAQQASLTEQRLTVE 557
>gi|155030198 RAP1, GTP-GDP dissociation stimulator 1 isoform 4
[Homo sapiens]
Length = 559
Score = 36.6 bits (83), Expect = 0.051
Identities = 56/228 (24%), Positives = 95/228 (41%), Gaps = 12/228 (5%)
Query: 239 NHAKMIVQENKGLKV-LIEATKAFLDN--PGILSELCGTLSRLAIRNEFCQEVVDLGGLS 295
N A ++ + K L + EA FL + P + +L GTL L E LG
Sbjct: 339 NLAIPVINKAKMLSAGVTEAVLKFLKSEMPPVQFKLLGTLRMLIDAQAEAAE--QLGKNV 396
Query: 296 ILVSLLAD-CNDHQMRDQSGVQELVKQVLSTLRAIAGNDDVKDAIVRAGGTESIVAAMTQ 354
LV L + C + +D +GV ++LS L + + DV IV++GG + +V T
Sbjct: 397 KLVERLVEWC---EAKDHAGVMGESNRLLSALIRHSKSKDVIKTIVQSGGIKHLVTMATS 453
Query: 355 HLTSPQVCEQSCAALCFLALRKPDNSRIIVEGGGAVAALQAMKAHPQKAGVQKQACMLIR 414
Q ++ AL +A + + +E V L + A + A K M++
Sbjct: 454 EHVIMQ--NEALVALALIAALELGTAEKDLESAKLVQILHRLLADERSAPEIKYNSMVLI 511
Query: 415 NLVAHGQAFSKPILDLGAEALIMQARSAHRDCEDVAKAALRDLGCHVE 462
+ + K + DL ++ + RS H + +A+L + VE
Sbjct: 512 CALMGSECLHKEVQDLAFLDVVSKLRS-HENKSVAQQASLTEQRLTVE 558
>gi|155030196 RAP1, GTP-GDP dissociation stimulator 1 isoform 3
[Homo sapiens]
Length = 607
Score = 36.6 bits (83), Expect = 0.051
Identities = 56/228 (24%), Positives = 95/228 (41%), Gaps = 12/228 (5%)
Query: 239 NHAKMIVQENKGLKV-LIEATKAFLDN--PGILSELCGTLSRLAIRNEFCQEVVDLGGLS 295
N A ++ + K L + EA FL + P + +L GTL L E LG
Sbjct: 387 NLAIPVINKAKMLSAGVTEAVLKFLKSEMPPVQFKLLGTLRMLIDAQAEAAE--QLGKNV 444
Query: 296 ILVSLLAD-CNDHQMRDQSGVQELVKQVLSTLRAIAGNDDVKDAIVRAGGTESIVAAMTQ 354
LV L + C + +D +GV ++LS L + + DV IV++GG + +V T
Sbjct: 445 KLVERLVEWC---EAKDHAGVMGESNRLLSALIRHSKSKDVIKTIVQSGGIKHLVTMATS 501
Query: 355 HLTSPQVCEQSCAALCFLALRKPDNSRIIVEGGGAVAALQAMKAHPQKAGVQKQACMLIR 414
Q ++ AL +A + + +E V L + A + A K M++
Sbjct: 502 EHVIMQ--NEALVALALIAALELGTAEKDLESAKLVQILHRLLADERSAPEIKYNSMVLI 559
Query: 415 NLVAHGQAFSKPILDLGAEALIMQARSAHRDCEDVAKAALRDLGCHVE 462
+ + K + DL ++ + RS H + +A+L + VE
Sbjct: 560 CALMGSECLHKEVQDLAFLDVVSKLRS-HENKSVAQQASLTEQRLTVE 606
>gi|155030192 RAP1, GTP-GDP dissociation stimulator 1 isoform 1
[Homo sapiens]
Length = 608
Score = 36.6 bits (83), Expect = 0.051
Identities = 56/228 (24%), Positives = 95/228 (41%), Gaps = 12/228 (5%)
Query: 239 NHAKMIVQENKGLKV-LIEATKAFLDN--PGILSELCGTLSRLAIRNEFCQEVVDLGGLS 295
N A ++ + K L + EA FL + P + +L GTL L E LG
Sbjct: 388 NLAIPVINKAKMLSAGVTEAVLKFLKSEMPPVQFKLLGTLRMLIDAQAEAAE--QLGKNV 445
Query: 296 ILVSLLAD-CNDHQMRDQSGVQELVKQVLSTLRAIAGNDDVKDAIVRAGGTESIVAAMTQ 354
LV L + C + +D +GV ++LS L + + DV IV++GG + +V T
Sbjct: 446 KLVERLVEWC---EAKDHAGVMGESNRLLSALIRHSKSKDVIKTIVQSGGIKHLVTMATS 502
Query: 355 HLTSPQVCEQSCAALCFLALRKPDNSRIIVEGGGAVAALQAMKAHPQKAGVQKQACMLIR 414
Q ++ AL +A + + +E V L + A + A K M++
Sbjct: 503 EHVIMQ--NEALVALALIAALELGTAEKDLESAKLVQILHRLLADERSAPEIKYNSMVLI 560
Query: 415 NLVAHGQAFSKPILDLGAEALIMQARSAHRDCEDVAKAALRDLGCHVE 462
+ + K + DL ++ + RS H + +A+L + VE
Sbjct: 561 CALMGSECLHKEVQDLAFLDVVSKLRS-HENKSVAQQASLTEQRLTVE 607
>gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens]
Length = 2303
Score = 36.6 bits (83), Expect = 0.051
Identities = 41/158 (25%), Positives = 65/158 (41%), Gaps = 6/158 (3%)
Query: 265 PGILSELCGTLSRLAIRNEFCQEVVDLGGLSILVSLL-ADCNDHQMRDQSGVQELVKQVL 323
P I C + +L+ E+ + + +LGGL + LL D H+M L +
Sbjct: 409 PQICQATCAVM-KLSFDEEYRRAMNELGGLQAVAELLQVDYEMHKMTRDPLNLALRRYAG 467
Query: 324 STLRAIAGNDDVKDAIV--RAGGTESIVAAMTQHLTSPQVCEQSCAALCFLALRKPDNSR 381
TL + D A + R G E+IVA + S ++ + + L L+ R NS+
Sbjct: 468 MTLTNLTFGDVANKATLCARRGCMEAIVAQLASD--SEELHQVVSSILRNLSWRADINSK 525
Query: 382 IIVEGGGAVAALQAMKAHPQKAGVQKQACMLIRNLVAH 419
++ G+V AL K K + NL AH
Sbjct: 526 KVLREAGSVTALVQCVLRATKESTLKSVLSALWNLSAH 563
Score = 29.3 bits (64), Expect = 8.2
Identities = 35/135 (25%), Positives = 53/135 (39%), Gaps = 15/135 (11%)
Query: 341 RAGGTESIVAAMTQHLTSPQVCEQSCAALCFLALRKPDNSRIIVEGGG--AVAAL----- 393
R GG E A PQ+C+ +CA + + R + E GG AVA L
Sbjct: 391 RDGGPEGGGAGSAPIPIEPQICQATCAVMKLSF--DEEYRRAMNELGGLQAVAELLQVDY 448
Query: 394 --QAMKAHPQKAGVQKQACMLIRNLVAHGQAFSKPILDLG---AEALIMQARSAHRDCED 448
M P +++ A M + NL G +K L EA++ Q S +
Sbjct: 449 EMHKMTRDPLNLALRRYAGMTLTNL-TFGDVANKATLCARRGCMEAIVAQLASDSEELHQ 507
Query: 449 VAKAALRDLGCHVEL 463
V + LR+L ++
Sbjct: 508 VVSSILRNLSWRADI 522
>gi|6912678 sperm associated antigen 6 isoform 1 [Homo sapiens]
Length = 509
Score = 35.8 bits (81), Expect = 0.087
Identities = 42/190 (22%), Positives = 82/190 (43%), Gaps = 20/190 (10%)
Query: 275 LSRLAIRNEFCQEVVDLGGLSILVSLLADCNDHQMRDQSGVQELVKQVLSTLRAIAG-ND 333
++ LA R + + + + G +S+L +LL D V + + L +A ND
Sbjct: 24 VAELATRPQNIETLQNAGVMSLLRTLLLDV----------VPTIQQTAALALGRLANYND 73
Query: 334 DVKDAIVRAGGTESIVAAMTQHLTSPQVCEQSCAALCFLALRK--PDNSRIIVEGGGAVA 391
D+ +A+V+ I+ + L + AA A+ K P ++ IV+ G
Sbjct: 74 DLAEAVVKC----DILPQLVYSLAEQNRFYKKAAAFVLRAVGKHSPQLAQAIVDCGALDT 129
Query: 392 ALQAMKAHPQKAGVQKQACMLIRNLVAHGQAFSKPILDLGA-EALIMQARSAHRDCEDVA 450
+ ++ GV++ A +R + H S+ ++D GA L++ + + +A
Sbjct: 130 LVICLEDFDP--GVKEAAAWALRYIARHNAELSQAVVDAGAVPLLVLCIQEPEIALKRIA 187
Query: 451 KAALRDLGCH 460
+AL D+ H
Sbjct: 188 ASALSDIAKH 197
>gi|27262641 sperm associated antigen 6 isoform 2 [Homo sapiens]
Length = 458
Score = 35.8 bits (81), Expect = 0.087
Identities = 42/190 (22%), Positives = 82/190 (43%), Gaps = 20/190 (10%)
Query: 275 LSRLAIRNEFCQEVVDLGGLSILVSLLADCNDHQMRDQSGVQELVKQVLSTLRAIAG-ND 333
++ LA R + + + + G +S+L +LL D V + + L +A ND
Sbjct: 24 VAELATRPQNIETLQNAGVMSLLRTLLLDV----------VPTIQQTAALALGRLANYND 73
Query: 334 DVKDAIVRAGGTESIVAAMTQHLTSPQVCEQSCAALCFLALRK--PDNSRIIVEGGGAVA 391
D+ +A+V+ I+ + L + AA A+ K P ++ IV+ G
Sbjct: 74 DLAEAVVKC----DILPQLVYSLAEQNRFYKKAAAFVLRAVGKHSPQLAQAIVDCGALDT 129
Query: 392 ALQAMKAHPQKAGVQKQACMLIRNLVAHGQAFSKPILDLGA-EALIMQARSAHRDCEDVA 450
+ ++ GV++ A +R + H S+ ++D GA L++ + + +A
Sbjct: 130 LVICLEDFDP--GVKEAAAWALRYIARHNAELSQAVVDAGAVPLLVLCIQEPEIALKRIA 187
Query: 451 KAALRDLGCH 460
+AL D+ H
Sbjct: 188 ASALSDIAKH 197
>gi|4502247 armadillo repeat protein [Homo sapiens]
Length = 962
Score = 34.7 bits (78), Expect = 0.19
Identities = 57/279 (20%), Positives = 108/279 (38%), Gaps = 33/279 (11%)
Query: 20 EEFAMGPEEAV---KEAVEQFESQGVDLSNIVKTAPKVSADGSQ-EPTHDILQMLSDLQE 75
E F +GPE + E+F+++ L + ++ G + EP +
Sbjct: 234 EAFPVGPEPGPPGGRSLPERFQAEPYGLEDDTRSLAADDEGGPELEPDYG---------- 283
Query: 76 SVASSRPQEVSAYLTRFCDQCKQDKACRFLAAQKGAYPIIFTAWKLATAGDQGLLLQSLN 135
+ RP+ TR + D LA ++ A+P++ G G L + +
Sbjct: 284 TATRRRPECGRGLHTRAYEDTADDGG--ELADERPAFPMVTAPLAQPERGSMGSLDRLVR 341
Query: 136 ALSVLTDG--QPDLLDAQGLQLLVATLTQNADEADLTCSGIRCVRHACLKHEQNRQDLVK 193
+ +P D + L ++A L D + ++H C ++E ++ + +
Sbjct: 342 RSPSVDSARKEPRWRDPE-LPEVLAMLRHPVDPVKANAAAY--LQHLCFENEGVKRRVRQ 398
Query: 194 AGVLPLLTGAITHHGHHTDVVREACWALRVMTFDDDIRVPFGHAHNHAKMIVQENKGLKV 253
LPLL + H +V R AC ALR +++ D K +++ G+
Sbjct: 399 LRGLPLLVALLDH--PRAEVRRRACGALRNLSYGRD---------TDNKAAIRDCGGVPA 447
Query: 254 LIEATKAFLDNPGILSELCGTLSRLAIRNEFCQEVVDLG 292
L+ +A DN + + GTL L+ ++D G
Sbjct: 448 LVRLLRAARDNE-VRELVTGTLWNLSSYEPLKMVIIDHG 485
>gi|224282119 splicing factor, arginine/serine-rich 14 [Homo
sapiens]
Length = 1082
Score = 34.3 bits (77), Expect = 0.25
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 10/82 (12%)
Query: 1 MVSKRIAQETFDAAVRENIEEFAMGPE-EAVKEAVEQFESQGVDLSNIVKTAPKVSADGS 59
M ++RI QETFDA ++E + + M EAV E + QF++Q ++++ P+ A+
Sbjct: 1 MAARRITQETFDAVLQEKAKRYHMDASGEAVSETL-QFKAQ-----DLLRAVPRSRAEMY 54
Query: 60 QEPTHDILQMLSDLQESVASSR 81
+ D LS SVA SR
Sbjct: 55 DDVHSDGRYSLSG---SVAHSR 73
>gi|224282117 splicing factor, arginine/serine-rich 14 [Homo
sapiens]
Length = 1082
Score = 34.3 bits (77), Expect = 0.25
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 10/82 (12%)
Query: 1 MVSKRIAQETFDAAVRENIEEFAMGPE-EAVKEAVEQFESQGVDLSNIVKTAPKVSADGS 59
M ++RI QETFDA ++E + + M EAV E + QF++Q ++++ P+ A+
Sbjct: 1 MAARRITQETFDAVLQEKAKRYHMDASGEAVSETL-QFKAQ-----DLLRAVPRSRAEMY 54
Query: 60 QEPTHDILQMLSDLQESVASSR 81
+ D LS SVA SR
Sbjct: 55 DDVHSDGRYSLSG---SVAHSR 73
>gi|33589814 zyg-11 homolog B (C. elegans)-like [Homo sapiens]
Length = 766
Score = 33.9 bits (76), Expect = 0.33
Identities = 26/110 (23%), Positives = 48/110 (43%), Gaps = 4/110 (3%)
Query: 310 RDQSGVQELVKQVLSTLRAIAGNDDVKDAIVRAGGTESIVAAMTQHL---TSPQVCEQSC 366
R +Q + + + L ND K+A+ + G +++ + + L T QV E S
Sbjct: 490 RQDESIQRIAVHLCNALVCQVDNDH-KEAVGKMGFVVTMLKLIQKKLLDKTCDQVMEFSW 548
Query: 367 AALCFLALRKPDNSRIIVEGGGAVAALQAMKAHPQKAGVQKQACMLIRNL 416
+AL + PDN + + G L +K P+K + + L+ N+
Sbjct: 549 SALWNITDETPDNCEMFLNFNGMKLFLDCLKEFPEKQELHRNMLGLLGNV 598
>gi|146231975 catenin, delta 1 isoform 3A [Homo sapiens]
Length = 832
Score = 33.5 bits (75), Expect = 0.43
Identities = 26/114 (22%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 177 VRHACLKHEQNRQDLVKAGVLPLLTGAITHHGHHTDVVREACWALRVMTFDDDIRVPFGH 236
++H C ++++ + D+ K +P+L G + H +V AC AL+ ++F D
Sbjct: 289 LQHLCYRNDKVKTDVRKLKGIPVLVGLLDH--PKKEVHLGACGALKNISFGRD------- 339
Query: 237 AHNHAKMIVQENKGLKVLIEATKAFLDNPGILSELCGTLSRLAIRNEFCQEVVD 290
K+ ++ G+ L+ + D + + GTL L+ + E+VD
Sbjct: 340 --QDNKIAIKNCDGVPALVRLLRKARD-MDLTEVITGTLWNLSSHDSIKMEIVD 390
>gi|146231948 catenin, delta 1 isoform 3A [Homo sapiens]
Length = 832
Score = 33.5 bits (75), Expect = 0.43
Identities = 26/114 (22%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 177 VRHACLKHEQNRQDLVKAGVLPLLTGAITHHGHHTDVVREACWALRVMTFDDDIRVPFGH 236
++H C ++++ + D+ K +P+L G + H +V AC AL+ ++F D
Sbjct: 289 LQHLCYRNDKVKTDVRKLKGIPVLVGLLDH--PKKEVHLGACGALKNISFGRD------- 339
Query: 237 AHNHAKMIVQENKGLKVLIEATKAFLDNPGILSELCGTLSRLAIRNEFCQEVVD 290
K+ ++ G+ L+ + D + + GTL L+ + E+VD
Sbjct: 340 --QDNKIAIKNCDGVPALVRLLRKARD-MDLTEVITGTLWNLSSHDSIKMEIVD 390
>gi|146231994 catenin, delta 1 isoform 3A [Homo sapiens]
Length = 832
Score = 33.5 bits (75), Expect = 0.43
Identities = 26/114 (22%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 177 VRHACLKHEQNRQDLVKAGVLPLLTGAITHHGHHTDVVREACWALRVMTFDDDIRVPFGH 236
++H C ++++ + D+ K +P+L G + H +V AC AL+ ++F D
Sbjct: 289 LQHLCYRNDKVKTDVRKLKGIPVLVGLLDH--PKKEVHLGACGALKNISFGRD------- 339
Query: 237 AHNHAKMIVQENKGLKVLIEATKAFLDNPGILSELCGTLSRLAIRNEFCQEVVD 290
K+ ++ G+ L+ + D + + GTL L+ + E+VD
Sbjct: 340 --QDNKIAIKNCDGVPALVRLLRKARD-MDLTEVITGTLWNLSSHDSIKMEIVD 390
>gi|146231977 catenin, delta 1 isoform 3AC [Homo sapiens]
Length = 838
Score = 33.5 bits (75), Expect = 0.43
Identities = 26/114 (22%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 177 VRHACLKHEQNRQDLVKAGVLPLLTGAITHHGHHTDVVREACWALRVMTFDDDIRVPFGH 236
++H C ++++ + D+ K +P+L G + H +V AC AL+ ++F D
Sbjct: 289 LQHLCYRNDKVKTDVRKLKGIPVLVGLLDH--PKKEVHLGACGALKNISFGRD------- 339
Query: 237 AHNHAKMIVQENKGLKVLIEATKAFLDNPGILSELCGTLSRLAIRNEFCQEVVD 290
K+ ++ G+ L+ + D + + GTL L+ + E+VD
Sbjct: 340 --QDNKIAIKNCDGVPALVRLLRKARD-MDLTEVITGTLWNLSSHDSIKMEIVD 390
>gi|146231946 catenin, delta 1 isoform 3B [Homo sapiens]
Length = 840
Score = 33.5 bits (75), Expect = 0.43
Identities = 26/114 (22%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 177 VRHACLKHEQNRQDLVKAGVLPLLTGAITHHGHHTDVVREACWALRVMTFDDDIRVPFGH 236
++H C ++++ + D+ K +P+L G + H +V AC AL+ ++F D
Sbjct: 289 LQHLCYRNDKVKTDVRKLKGIPVLVGLLDH--PKKEVHLGACGALKNISFGRD------- 339
Query: 237 AHNHAKMIVQENKGLKVLIEATKAFLDNPGILSELCGTLSRLAIRNEFCQEVVD 290
K+ ++ G+ L+ + D + + GTL L+ + E+VD
Sbjct: 340 --QDNKIAIKNCDGVPALVRLLRKARD-MDLTEVITGTLWNLSSHDSIKMEIVD 390
>gi|146231991 catenin, delta 1 isoform 3AB [Homo sapiens]
Length = 861
Score = 33.5 bits (75), Expect = 0.43
Identities = 26/114 (22%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 177 VRHACLKHEQNRQDLVKAGVLPLLTGAITHHGHHTDVVREACWALRVMTFDDDIRVPFGH 236
++H C ++++ + D+ K +P+L G + H +V AC AL+ ++F D
Sbjct: 289 LQHLCYRNDKVKTDVRKLKGIPVLVGLLDH--PKKEVHLGACGALKNISFGRD------- 339
Query: 237 AHNHAKMIVQENKGLKVLIEATKAFLDNPGILSELCGTLSRLAIRNEFCQEVVD 290
K+ ++ G+ L+ + D + + GTL L+ + E+VD
Sbjct: 340 --QDNKIAIKNCDGVPALVRLLRKARD-MDLTEVITGTLWNLSSHDSIKMEIVD 390
>gi|146231970 catenin, delta 1 isoform 3ABC [Homo sapiens]
Length = 867
Score = 33.5 bits (75), Expect = 0.43
Identities = 26/114 (22%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 177 VRHACLKHEQNRQDLVKAGVLPLLTGAITHHGHHTDVVREACWALRVMTFDDDIRVPFGH 236
++H C ++++ + D+ K +P+L G + H +V AC AL+ ++F D
Sbjct: 289 LQHLCYRNDKVKTDVRKLKGIPVLVGLLDH--PKKEVHLGACGALKNISFGRD------- 339
Query: 237 AHNHAKMIVQENKGLKVLIEATKAFLDNPGILSELCGTLSRLAIRNEFCQEVVD 290
K+ ++ G+ L+ + D + + GTL L+ + E+VD
Sbjct: 340 --QDNKIAIKNCDGVPALVRLLRKARD-MDLTEVITGTLWNLSSHDSIKMEIVD 390
>gi|146231942 catenin, delta 1 isoform 1A [Homo sapiens]
Length = 933
Score = 33.5 bits (75), Expect = 0.43
Identities = 26/114 (22%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 177 VRHACLKHEQNRQDLVKAGVLPLLTGAITHHGHHTDVVREACWALRVMTFDDDIRVPFGH 236
++H C ++++ + D+ K +P+L G + H +V AC AL+ ++F D
Sbjct: 390 LQHLCYRNDKVKTDVRKLKGIPVLVGLLDH--PKKEVHLGACGALKNISFGRD------- 440
Query: 237 AHNHAKMIVQENKGLKVLIEATKAFLDNPGILSELCGTLSRLAIRNEFCQEVVD 290
K+ ++ G+ L+ + D + + GTL L+ + E+VD
Sbjct: 441 --QDNKIAIKNCDGVPALVRLLRKARD-MDLTEVITGTLWNLSSHDSIKMEIVD 491
>gi|146231968 catenin, delta 1 isoform 1A [Homo sapiens]
Length = 933
Score = 33.5 bits (75), Expect = 0.43
Identities = 26/114 (22%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 177 VRHACLKHEQNRQDLVKAGVLPLLTGAITHHGHHTDVVREACWALRVMTFDDDIRVPFGH 236
++H C ++++ + D+ K +P+L G + H +V AC AL+ ++F D
Sbjct: 390 LQHLCYRNDKVKTDVRKLKGIPVLVGLLDH--PKKEVHLGACGALKNISFGRD------- 440
Query: 237 AHNHAKMIVQENKGLKVLIEATKAFLDNPGILSELCGTLSRLAIRNEFCQEVVD 290
K+ ++ G+ L+ + D + + GTL L+ + E+VD
Sbjct: 441 --QDNKIAIKNCDGVPALVRLLRKARD-MDLTEVITGTLWNLSSHDSIKMEIVD 491
>gi|146231938 catenin, delta 1 isoform 1A [Homo sapiens]
Length = 933
Score = 33.5 bits (75), Expect = 0.43
Identities = 26/114 (22%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 177 VRHACLKHEQNRQDLVKAGVLPLLTGAITHHGHHTDVVREACWALRVMTFDDDIRVPFGH 236
++H C ++++ + D+ K +P+L G + H +V AC AL+ ++F D
Sbjct: 390 LQHLCYRNDKVKTDVRKLKGIPVLVGLLDH--PKKEVHLGACGALKNISFGRD------- 440
Query: 237 AHNHAKMIVQENKGLKVLIEATKAFLDNPGILSELCGTLSRLAIRNEFCQEVVD 290
K+ ++ G+ L+ + D + + GTL L+ + E+VD
Sbjct: 441 --QDNKIAIKNCDGVPALVRLLRKARD-MDLTEVITGTLWNLSSHDSIKMEIVD 491
>gi|10835010 catenin, delta 1 isoform 1B [Homo sapiens]
Length = 941
Score = 33.5 bits (75), Expect = 0.43
Identities = 26/114 (22%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 177 VRHACLKHEQNRQDLVKAGVLPLLTGAITHHGHHTDVVREACWALRVMTFDDDIRVPFGH 236
++H C ++++ + D+ K +P+L G + H +V AC AL+ ++F D
Sbjct: 390 LQHLCYRNDKVKTDVRKLKGIPVLVGLLDH--PKKEVHLGACGALKNISFGRD------- 440
Query: 237 AHNHAKMIVQENKGLKVLIEATKAFLDNPGILSELCGTLSRLAIRNEFCQEVVD 290
K+ ++ G+ L+ + D + + GTL L+ + E+VD
Sbjct: 441 --QDNKIAIKNCDGVPALVRLLRKARD-MDLTEVITGTLWNLSSHDSIKMEIVD 491
>gi|146231962 catenin, delta 1 isoform 1AB [Homo sapiens]
Length = 962
Score = 33.5 bits (75), Expect = 0.43
Identities = 26/114 (22%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 177 VRHACLKHEQNRQDLVKAGVLPLLTGAITHHGHHTDVVREACWALRVMTFDDDIRVPFGH 236
++H C ++++ + D+ K +P+L G + H +V AC AL+ ++F D
Sbjct: 390 LQHLCYRNDKVKTDVRKLKGIPVLVGLLDH--PKKEVHLGACGALKNISFGRD------- 440
Query: 237 AHNHAKMIVQENKGLKVLIEATKAFLDNPGILSELCGTLSRLAIRNEFCQEVVD 290
K+ ++ G+ L+ + D + + GTL L+ + E+VD
Sbjct: 441 --QDNKIAIKNCDGVPALVRLLRKARD-MDLTEVITGTLWNLSSHDSIKMEIVD 491
>gi|146231940 catenin, delta 1 isoform 1ABC [Homo sapiens]
Length = 968
Score = 33.5 bits (75), Expect = 0.43
Identities = 26/114 (22%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 177 VRHACLKHEQNRQDLVKAGVLPLLTGAITHHGHHTDVVREACWALRVMTFDDDIRVPFGH 236
++H C ++++ + D+ K +P+L G + H +V AC AL+ ++F D
Sbjct: 390 LQHLCYRNDKVKTDVRKLKGIPVLVGLLDH--PKKEVHLGACGALKNISFGRD------- 440
Query: 237 AHNHAKMIVQENKGLKVLIEATKAFLDNPGILSELCGTLSRLAIRNEFCQEVVD 290
K+ ++ G+ L+ + D + + GTL L+ + E+VD
Sbjct: 441 --QDNKIAIKNCDGVPALVRLLRKARD-MDLTEVITGTLWNLSSHDSIKMEIVD 491
>gi|148762963 armadillo repeat containing 2 [Homo sapiens]
Length = 867
Score = 33.5 bits (75), Expect = 0.43
Identities = 31/133 (23%), Positives = 56/133 (42%), Gaps = 23/133 (17%)
Query: 244 IVQENKGLKVLIEATK---------AFLDNPGILSELCGTLSRLAIRNEFCQEVVDLGGL 294
++Q + L+ L+E + AFL G + + G L F E++ G +
Sbjct: 368 LIQNDSILESLLEVLRSEDLQTNMEAFLYCMGSIKFISGNLG-------FLNEMISKGAV 420
Query: 295 SILVSLLADCNDHQMR-----DQSGVQELVKQVLSTLRAIAGNDDVKDAIVRAGGTESIV 349
IL++L+ N++ + SG L+ QV +TLR + + V+ + +
Sbjct: 421 EILINLIKQINENIKKCGTFLPNSG--HLLVQVTATLRNLVDSSLVRSKFLNISALPQLC 478
Query: 350 AAMTQHLTSPQVC 362
AM Q+ VC
Sbjct: 479 TAMEQYKGDKDVC 491
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.133 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,270,072
Number of Sequences: 37866
Number of extensions: 641618
Number of successful extensions: 1705
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 43
Number of HSP's that attempted gapping in prelim test: 1679
Number of HSP's gapped (non-prelim): 67
length of query: 476
length of database: 18,247,518
effective HSP length: 106
effective length of query: 370
effective length of database: 14,233,722
effective search space: 5266477140
effective search space used: 5266477140
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.