Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 154448892
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|154448892 exportin 7 isoform b [Homo sapiens]
(1087 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|154448892 exportin 7 isoform b [Homo sapiens] 2150 0.0
gi|154448894 exportin 7 isoform a [Homo sapiens] 2142 0.0
gi|154448896 exportin 7 isoform c [Homo sapiens] 2138 0.0
gi|12597633 RAN binding protein 17 [Homo sapiens] 1502 0.0
gi|148886661 exportin 4 [Homo sapiens] 115 2e-25
gi|4507943 exportin 1 [Homo sapiens] 32 4.3
gi|127139033 cytochrome P450 reductase [Homo sapiens] 32 4.3
gi|23097308 spectrin repeat containing, nuclear envelope 1 isofo... 31 5.6
gi|154277116 spectrin repeat containing, nuclear envelope 1 isof... 31 5.6
gi|156104866 acyl-Coenzyme A oxidase 3 isoform b [Homo sapiens] 31 5.6
gi|7662316 HIV-1 Vpr binding protein [Homo sapiens] 31 7.3
gi|226442751 hypothetical protein LOC647309 [Homo sapiens] 31 7.3
gi|4506787 IQ motif containing GTPase activating protein 1 [Homo... 30 9.5
gi|21264592 ArfGAP with RhoGAP domain, ankyrin repeat and PH dom... 30 9.5
gi|7661566 integrator complex subunit 7 [Homo sapiens] 30 9.5
>gi|154448892 exportin 7 isoform b [Homo sapiens]
Length = 1087
Score = 2150 bits (5571), Expect = 0.0
Identities = 1087/1087 (100%), Positives = 1087/1087 (100%)
Query: 1 MADHVQSLAQLENLCKQLYETTDTTTRLQAEKALVEFTNSPDCLSKCQLLLERGSSSYSQ 60
MADHVQSLAQLENLCKQLYETTDTTTRLQAEKALVEFTNSPDCLSKCQLLLERGSSSYSQ
Sbjct: 1 MADHVQSLAQLENLCKQLYETTDTTTRLQAEKALVEFTNSPDCLSKCQLLLERGSSSYSQ 60
Query: 61 LLAATCLTKLVSRTNNPLPLEQRIDIRNYVLNYLATRPKLATFVTQALIQLYARITKLGW 120
LLAATCLTKLVSRTNNPLPLEQRIDIRNYVLNYLATRPKLATFVTQALIQLYARITKLGW
Sbjct: 61 LLAATCLTKLVSRTNNPLPLEQRIDIRNYVLNYLATRPKLATFVTQALIQLYARITKLGW 120
Query: 121 FDCQKDDYVFRNAITDVTRFLQDSVEYCIIGVTILSQLTNEINQADTTHPLTKHRKIASS 180
FDCQKDDYVFRNAITDVTRFLQDSVEYCIIGVTILSQLTNEINQADTTHPLTKHRKIASS
Sbjct: 121 FDCQKDDYVFRNAITDVTRFLQDSVEYCIIGVTILSQLTNEINQADTTHPLTKHRKIASS 180
Query: 181 FRDSSLFDIFTLSCNLLKQASGKNLNLNDESQHGLLMQLLKLTHNCLNFDFIGTSTDESS 240
FRDSSLFDIFTLSCNLLKQASGKNLNLNDESQHGLLMQLLKLTHNCLNFDFIGTSTDESS
Sbjct: 181 FRDSSLFDIFTLSCNLLKQASGKNLNLNDESQHGLLMQLLKLTHNCLNFDFIGTSTDESS 240
Query: 241 DDLCTVQIPTSWRSAFLDSSTLQLFFDLYHSIPPSFSPLVLSCLVQIASVRRSLFNNAER 300
DDLCTVQIPTSWRSAFLDSSTLQLFFDLYHSIPPSFSPLVLSCLVQIASVRRSLFNNAER
Sbjct: 241 DDLCTVQIPTSWRSAFLDSSTLQLFFDLYHSIPPSFSPLVLSCLVQIASVRRSLFNNAER 300
Query: 301 AKFLSHLVDGVKRILENPQSLSDPNNYHEFCRLLARLKSNYQLGELVKVENYPEVIRLIA 360
AKFLSHLVDGVKRILENPQSLSDPNNYHEFCRLLARLKSNYQLGELVKVENYPEVIRLIA
Sbjct: 301 AKFLSHLVDGVKRILENPQSLSDPNNYHEFCRLLARLKSNYQLGELVKVENYPEVIRLIA 360
Query: 361 NFTVTSLQHWEFAPNSVHYLLSLWQRLAASVPYVKATEPHMLETYTPEVTKAYITSRLES 420
NFTVTSLQHWEFAPNSVHYLLSLWQRLAASVPYVKATEPHMLETYTPEVTKAYITSRLES
Sbjct: 361 NFTVTSLQHWEFAPNSVHYLLSLWQRLAASVPYVKATEPHMLETYTPEVTKAYITSRLES 420
Query: 421 VHIILRDGLEDPLEDTGLVQQQLDQLSTIGRCEYEKTCALLVQLFDQSAQSYQELLQSAS 480
VHIILRDGLEDPLEDTGLVQQQLDQLSTIGRCEYEKTCALLVQLFDQSAQSYQELLQSAS
Sbjct: 421 VHIILRDGLEDPLEDTGLVQQQLDQLSTIGRCEYEKTCALLVQLFDQSAQSYQELLQSAS 480
Query: 481 ASPMDIAVQEGRLTWLVYIIGAVIGGRVSFASTDEQDAMDGELVCRVLQLMNLTDSRLAQ 540
ASPMDIAVQEGRLTWLVYIIGAVIGGRVSFASTDEQDAMDGELVCRVLQLMNLTDSRLAQ
Sbjct: 481 ASPMDIAVQEGRLTWLVYIIGAVIGGRVSFASTDEQDAMDGELVCRVLQLMNLTDSRLAQ 540
Query: 541 AGNEKLELAMLSFFEQFRKIYIGDQVQKSSKLYRRLSEVLGLNDETMVLSVFIGKIITNL 600
AGNEKLELAMLSFFEQFRKIYIGDQVQKSSKLYRRLSEVLGLNDETMVLSVFIGKIITNL
Sbjct: 541 AGNEKLELAMLSFFEQFRKIYIGDQVQKSSKLYRRLSEVLGLNDETMVLSVFIGKIITNL 600
Query: 601 KYWGRCEPITSKTLQLLNDLSIGYSSVRKLVKLSAVQFMLNNHTSEHFSFLGINNQSNLT 660
KYWGRCEPITSKTLQLLNDLSIGYSSVRKLVKLSAVQFMLNNHTSEHFSFLGINNQSNLT
Sbjct: 601 KYWGRCEPITSKTLQLLNDLSIGYSSVRKLVKLSAVQFMLNNHTSEHFSFLGINNQSNLT 660
Query: 661 DMRCRTTFYTALGRLLMVDLGEDEDQYEQFMLPLTAAFEAVAQMFSTNSFNEQEAKRTLV 720
DMRCRTTFYTALGRLLMVDLGEDEDQYEQFMLPLTAAFEAVAQMFSTNSFNEQEAKRTLV
Sbjct: 661 DMRCRTTFYTALGRLLMVDLGEDEDQYEQFMLPLTAAFEAVAQMFSTNSFNEQEAKRTLV 720
Query: 721 GLVRDLRGIAFAFNAKTSFMMLFEWIYPSYMPILQRAIELWYHDPACTTPVLKLMAELVH 780
GLVRDLRGIAFAFNAKTSFMMLFEWIYPSYMPILQRAIELWYHDPACTTPVLKLMAELVH
Sbjct: 721 GLVRDLRGIAFAFNAKTSFMMLFEWIYPSYMPILQRAIELWYHDPACTTPVLKLMAELVH 780
Query: 781 NRSQRLQFDVSSPNGILLFRETSKMITMYGNRILTLGEVPKDQVYALKLKGISICFSMLK 840
NRSQRLQFDVSSPNGILLFRETSKMITMYGNRILTLGEVPKDQVYALKLKGISICFSMLK
Sbjct: 781 NRSQRLQFDVSSPNGILLFRETSKMITMYGNRILTLGEVPKDQVYALKLKGISICFSMLK 840
Query: 841 AALSGSYVNFGVFRLYGDDALDNALQTFIKLLLSIPHSDLLDYPKLSQSYYSLLEVLTQD 900
AALSGSYVNFGVFRLYGDDALDNALQTFIKLLLSIPHSDLLDYPKLSQSYYSLLEVLTQD
Sbjct: 841 AALSGSYVNFGVFRLYGDDALDNALQTFIKLLLSIPHSDLLDYPKLSQSYYSLLEVLTQD 900
Query: 901 HMNFIASLEPHVIMYILSSISEGLTALDTMVCTGCCSCLDHIVTYLFKQLSRSTKKRTTP 960
HMNFIASLEPHVIMYILSSISEGLTALDTMVCTGCCSCLDHIVTYLFKQLSRSTKKRTTP
Sbjct: 901 HMNFIASLEPHVIMYILSSISEGLTALDTMVCTGCCSCLDHIVTYLFKQLSRSTKKRTTP 960
Query: 961 LNQESDRFLHIMQQHPEMIQQMLSTVLNIIIFEDCRNQWSMSRPLLGLILLNEKYFSDLR 1020
LNQESDRFLHIMQQHPEMIQQMLSTVLNIIIFEDCRNQWSMSRPLLGLILLNEKYFSDLR
Sbjct: 961 LNQESDRFLHIMQQHPEMIQQMLSTVLNIIIFEDCRNQWSMSRPLLGLILLNEKYFSDLR 1020
Query: 1021 NSIVNSQPPEKQQAMHLCFENLMEGIERNLLTKNRDRFTQNLSAFRREVNDSMKNSTYGV 1080
NSIVNSQPPEKQQAMHLCFENLMEGIERNLLTKNRDRFTQNLSAFRREVNDSMKNSTYGV
Sbjct: 1021 NSIVNSQPPEKQQAMHLCFENLMEGIERNLLTKNRDRFTQNLSAFRREVNDSMKNSTYGV 1080
Query: 1081 NSNDMMS 1087
NSNDMMS
Sbjct: 1081 NSNDMMS 1087
>gi|154448894 exportin 7 isoform a [Homo sapiens]
Length = 1096
Score = 2142 bits (5551), Expect = 0.0
Identities = 1087/1096 (99%), Positives = 1087/1096 (99%), Gaps = 9/1096 (0%)
Query: 1 MADHVQSLAQLENLCKQLYETTDTTTRLQAEKALVEFTNSPDCLSKCQLLLERGSSSYSQ 60
MADHVQSLAQLENLCKQLYETTDTTTRLQAEKALVEFTNSPDCLSKCQLLLERGSSSYSQ
Sbjct: 1 MADHVQSLAQLENLCKQLYETTDTTTRLQAEKALVEFTNSPDCLSKCQLLLERGSSSYSQ 60
Query: 61 LLAATCLTKLVSRTNNPLPLEQRIDIRNYVLNYLATRPKLATFVTQALIQLYARITKLGW 120
LLAATCLTKLVSRTNNPLPLEQRIDIRNYVLNYLATRPKLATFVTQALIQLYARITKLGW
Sbjct: 61 LLAATCLTKLVSRTNNPLPLEQRIDIRNYVLNYLATRPKLATFVTQALIQLYARITKLGW 120
Query: 121 FDCQKDDYVFRNAITDVTRFLQDSVEYCIIGVTILSQLTNEINQ---------ADTTHPL 171
FDCQKDDYVFRNAITDVTRFLQDSVEYCIIGVTILSQLTNEINQ ADTTHPL
Sbjct: 121 FDCQKDDYVFRNAITDVTRFLQDSVEYCIIGVTILSQLTNEINQVSATAFLIEADTTHPL 180
Query: 172 TKHRKIASSFRDSSLFDIFTLSCNLLKQASGKNLNLNDESQHGLLMQLLKLTHNCLNFDF 231
TKHRKIASSFRDSSLFDIFTLSCNLLKQASGKNLNLNDESQHGLLMQLLKLTHNCLNFDF
Sbjct: 181 TKHRKIASSFRDSSLFDIFTLSCNLLKQASGKNLNLNDESQHGLLMQLLKLTHNCLNFDF 240
Query: 232 IGTSTDESSDDLCTVQIPTSWRSAFLDSSTLQLFFDLYHSIPPSFSPLVLSCLVQIASVR 291
IGTSTDESSDDLCTVQIPTSWRSAFLDSSTLQLFFDLYHSIPPSFSPLVLSCLVQIASVR
Sbjct: 241 IGTSTDESSDDLCTVQIPTSWRSAFLDSSTLQLFFDLYHSIPPSFSPLVLSCLVQIASVR 300
Query: 292 RSLFNNAERAKFLSHLVDGVKRILENPQSLSDPNNYHEFCRLLARLKSNYQLGELVKVEN 351
RSLFNNAERAKFLSHLVDGVKRILENPQSLSDPNNYHEFCRLLARLKSNYQLGELVKVEN
Sbjct: 301 RSLFNNAERAKFLSHLVDGVKRILENPQSLSDPNNYHEFCRLLARLKSNYQLGELVKVEN 360
Query: 352 YPEVIRLIANFTVTSLQHWEFAPNSVHYLLSLWQRLAASVPYVKATEPHMLETYTPEVTK 411
YPEVIRLIANFTVTSLQHWEFAPNSVHYLLSLWQRLAASVPYVKATEPHMLETYTPEVTK
Sbjct: 361 YPEVIRLIANFTVTSLQHWEFAPNSVHYLLSLWQRLAASVPYVKATEPHMLETYTPEVTK 420
Query: 412 AYITSRLESVHIILRDGLEDPLEDTGLVQQQLDQLSTIGRCEYEKTCALLVQLFDQSAQS 471
AYITSRLESVHIILRDGLEDPLEDTGLVQQQLDQLSTIGRCEYEKTCALLVQLFDQSAQS
Sbjct: 421 AYITSRLESVHIILRDGLEDPLEDTGLVQQQLDQLSTIGRCEYEKTCALLVQLFDQSAQS 480
Query: 472 YQELLQSASASPMDIAVQEGRLTWLVYIIGAVIGGRVSFASTDEQDAMDGELVCRVLQLM 531
YQELLQSASASPMDIAVQEGRLTWLVYIIGAVIGGRVSFASTDEQDAMDGELVCRVLQLM
Sbjct: 481 YQELLQSASASPMDIAVQEGRLTWLVYIIGAVIGGRVSFASTDEQDAMDGELVCRVLQLM 540
Query: 532 NLTDSRLAQAGNEKLELAMLSFFEQFRKIYIGDQVQKSSKLYRRLSEVLGLNDETMVLSV 591
NLTDSRLAQAGNEKLELAMLSFFEQFRKIYIGDQVQKSSKLYRRLSEVLGLNDETMVLSV
Sbjct: 541 NLTDSRLAQAGNEKLELAMLSFFEQFRKIYIGDQVQKSSKLYRRLSEVLGLNDETMVLSV 600
Query: 592 FIGKIITNLKYWGRCEPITSKTLQLLNDLSIGYSSVRKLVKLSAVQFMLNNHTSEHFSFL 651
FIGKIITNLKYWGRCEPITSKTLQLLNDLSIGYSSVRKLVKLSAVQFMLNNHTSEHFSFL
Sbjct: 601 FIGKIITNLKYWGRCEPITSKTLQLLNDLSIGYSSVRKLVKLSAVQFMLNNHTSEHFSFL 660
Query: 652 GINNQSNLTDMRCRTTFYTALGRLLMVDLGEDEDQYEQFMLPLTAAFEAVAQMFSTNSFN 711
GINNQSNLTDMRCRTTFYTALGRLLMVDLGEDEDQYEQFMLPLTAAFEAVAQMFSTNSFN
Sbjct: 661 GINNQSNLTDMRCRTTFYTALGRLLMVDLGEDEDQYEQFMLPLTAAFEAVAQMFSTNSFN 720
Query: 712 EQEAKRTLVGLVRDLRGIAFAFNAKTSFMMLFEWIYPSYMPILQRAIELWYHDPACTTPV 771
EQEAKRTLVGLVRDLRGIAFAFNAKTSFMMLFEWIYPSYMPILQRAIELWYHDPACTTPV
Sbjct: 721 EQEAKRTLVGLVRDLRGIAFAFNAKTSFMMLFEWIYPSYMPILQRAIELWYHDPACTTPV 780
Query: 772 LKLMAELVHNRSQRLQFDVSSPNGILLFRETSKMITMYGNRILTLGEVPKDQVYALKLKG 831
LKLMAELVHNRSQRLQFDVSSPNGILLFRETSKMITMYGNRILTLGEVPKDQVYALKLKG
Sbjct: 781 LKLMAELVHNRSQRLQFDVSSPNGILLFRETSKMITMYGNRILTLGEVPKDQVYALKLKG 840
Query: 832 ISICFSMLKAALSGSYVNFGVFRLYGDDALDNALQTFIKLLLSIPHSDLLDYPKLSQSYY 891
ISICFSMLKAALSGSYVNFGVFRLYGDDALDNALQTFIKLLLSIPHSDLLDYPKLSQSYY
Sbjct: 841 ISICFSMLKAALSGSYVNFGVFRLYGDDALDNALQTFIKLLLSIPHSDLLDYPKLSQSYY 900
Query: 892 SLLEVLTQDHMNFIASLEPHVIMYILSSISEGLTALDTMVCTGCCSCLDHIVTYLFKQLS 951
SLLEVLTQDHMNFIASLEPHVIMYILSSISEGLTALDTMVCTGCCSCLDHIVTYLFKQLS
Sbjct: 901 SLLEVLTQDHMNFIASLEPHVIMYILSSISEGLTALDTMVCTGCCSCLDHIVTYLFKQLS 960
Query: 952 RSTKKRTTPLNQESDRFLHIMQQHPEMIQQMLSTVLNIIIFEDCRNQWSMSRPLLGLILL 1011
RSTKKRTTPLNQESDRFLHIMQQHPEMIQQMLSTVLNIIIFEDCRNQWSMSRPLLGLILL
Sbjct: 961 RSTKKRTTPLNQESDRFLHIMQQHPEMIQQMLSTVLNIIIFEDCRNQWSMSRPLLGLILL 1020
Query: 1012 NEKYFSDLRNSIVNSQPPEKQQAMHLCFENLMEGIERNLLTKNRDRFTQNLSAFRREVND 1071
NEKYFSDLRNSIVNSQPPEKQQAMHLCFENLMEGIERNLLTKNRDRFTQNLSAFRREVND
Sbjct: 1021 NEKYFSDLRNSIVNSQPPEKQQAMHLCFENLMEGIERNLLTKNRDRFTQNLSAFRREVND 1080
Query: 1072 SMKNSTYGVNSNDMMS 1087
SMKNSTYGVNSNDMMS
Sbjct: 1081 SMKNSTYGVNSNDMMS 1096
>gi|154448896 exportin 7 isoform c [Homo sapiens]
Length = 1088
Score = 2138 bits (5540), Expect = 0.0
Identities = 1081/1082 (99%), Positives = 1082/1082 (100%)
Query: 6 QSLAQLENLCKQLYETTDTTTRLQAEKALVEFTNSPDCLSKCQLLLERGSSSYSQLLAAT 65
+SLAQLENLCKQLYETTDTTTRLQAEKALVEFTNSPDCLSKCQLLLERGSSSYSQLLAAT
Sbjct: 7 KSLAQLENLCKQLYETTDTTTRLQAEKALVEFTNSPDCLSKCQLLLERGSSSYSQLLAAT 66
Query: 66 CLTKLVSRTNNPLPLEQRIDIRNYVLNYLATRPKLATFVTQALIQLYARITKLGWFDCQK 125
CLTKLVSRTNNPLPLEQRIDIRNYVLNYLATRPKLATFVTQALIQLYARITKLGWFDCQK
Sbjct: 67 CLTKLVSRTNNPLPLEQRIDIRNYVLNYLATRPKLATFVTQALIQLYARITKLGWFDCQK 126
Query: 126 DDYVFRNAITDVTRFLQDSVEYCIIGVTILSQLTNEINQADTTHPLTKHRKIASSFRDSS 185
DDYVFRNAITDVTRFLQDSVEYCIIGVTILSQLTNEINQADTTHPLTKHRKIASSFRDSS
Sbjct: 127 DDYVFRNAITDVTRFLQDSVEYCIIGVTILSQLTNEINQADTTHPLTKHRKIASSFRDSS 186
Query: 186 LFDIFTLSCNLLKQASGKNLNLNDESQHGLLMQLLKLTHNCLNFDFIGTSTDESSDDLCT 245
LFDIFTLSCNLLKQASGKNLNLNDESQHGLLMQLLKLTHNCLNFDFIGTSTDESSDDLCT
Sbjct: 187 LFDIFTLSCNLLKQASGKNLNLNDESQHGLLMQLLKLTHNCLNFDFIGTSTDESSDDLCT 246
Query: 246 VQIPTSWRSAFLDSSTLQLFFDLYHSIPPSFSPLVLSCLVQIASVRRSLFNNAERAKFLS 305
VQIPTSWRSAFLDSSTLQLFFDLYHSIPPSFSPLVLSCLVQIASVRRSLFNNAERAKFLS
Sbjct: 247 VQIPTSWRSAFLDSSTLQLFFDLYHSIPPSFSPLVLSCLVQIASVRRSLFNNAERAKFLS 306
Query: 306 HLVDGVKRILENPQSLSDPNNYHEFCRLLARLKSNYQLGELVKVENYPEVIRLIANFTVT 365
HLVDGVKRILENPQSLSDPNNYHEFCRLLARLKSNYQLGELVKVENYPEVIRLIANFTVT
Sbjct: 307 HLVDGVKRILENPQSLSDPNNYHEFCRLLARLKSNYQLGELVKVENYPEVIRLIANFTVT 366
Query: 366 SLQHWEFAPNSVHYLLSLWQRLAASVPYVKATEPHMLETYTPEVTKAYITSRLESVHIIL 425
SLQHWEFAPNSVHYLLSLWQRLAASVPYVKATEPHMLETYTPEVTKAYITSRLESVHIIL
Sbjct: 367 SLQHWEFAPNSVHYLLSLWQRLAASVPYVKATEPHMLETYTPEVTKAYITSRLESVHIIL 426
Query: 426 RDGLEDPLEDTGLVQQQLDQLSTIGRCEYEKTCALLVQLFDQSAQSYQELLQSASASPMD 485
RDGLEDPLEDTGLVQQQLDQLSTIGRCEYEKTCALLVQLFDQSAQSYQELLQSASASPMD
Sbjct: 427 RDGLEDPLEDTGLVQQQLDQLSTIGRCEYEKTCALLVQLFDQSAQSYQELLQSASASPMD 486
Query: 486 IAVQEGRLTWLVYIIGAVIGGRVSFASTDEQDAMDGELVCRVLQLMNLTDSRLAQAGNEK 545
IAVQEGRLTWLVYIIGAVIGGRVSFASTDEQDAMDGELVCRVLQLMNLTDSRLAQAGNEK
Sbjct: 487 IAVQEGRLTWLVYIIGAVIGGRVSFASTDEQDAMDGELVCRVLQLMNLTDSRLAQAGNEK 546
Query: 546 LELAMLSFFEQFRKIYIGDQVQKSSKLYRRLSEVLGLNDETMVLSVFIGKIITNLKYWGR 605
LELAMLSFFEQFRKIYIGDQVQKSSKLYRRLSEVLGLNDETMVLSVFIGKIITNLKYWGR
Sbjct: 547 LELAMLSFFEQFRKIYIGDQVQKSSKLYRRLSEVLGLNDETMVLSVFIGKIITNLKYWGR 606
Query: 606 CEPITSKTLQLLNDLSIGYSSVRKLVKLSAVQFMLNNHTSEHFSFLGINNQSNLTDMRCR 665
CEPITSKTLQLLNDLSIGYSSVRKLVKLSAVQFMLNNHTSEHFSFLGINNQSNLTDMRCR
Sbjct: 607 CEPITSKTLQLLNDLSIGYSSVRKLVKLSAVQFMLNNHTSEHFSFLGINNQSNLTDMRCR 666
Query: 666 TTFYTALGRLLMVDLGEDEDQYEQFMLPLTAAFEAVAQMFSTNSFNEQEAKRTLVGLVRD 725
TTFYTALGRLLMVDLGEDEDQYEQFMLPLTAAFEAVAQMFSTNSFNEQEAKRTLVGLVRD
Sbjct: 667 TTFYTALGRLLMVDLGEDEDQYEQFMLPLTAAFEAVAQMFSTNSFNEQEAKRTLVGLVRD 726
Query: 726 LRGIAFAFNAKTSFMMLFEWIYPSYMPILQRAIELWYHDPACTTPVLKLMAELVHNRSQR 785
LRGIAFAFNAKTSFMMLFEWIYPSYMPILQRAIELWYHDPACTTPVLKLMAELVHNRSQR
Sbjct: 727 LRGIAFAFNAKTSFMMLFEWIYPSYMPILQRAIELWYHDPACTTPVLKLMAELVHNRSQR 786
Query: 786 LQFDVSSPNGILLFRETSKMITMYGNRILTLGEVPKDQVYALKLKGISICFSMLKAALSG 845
LQFDVSSPNGILLFRETSKMITMYGNRILTLGEVPKDQVYALKLKGISICFSMLKAALSG
Sbjct: 787 LQFDVSSPNGILLFRETSKMITMYGNRILTLGEVPKDQVYALKLKGISICFSMLKAALSG 846
Query: 846 SYVNFGVFRLYGDDALDNALQTFIKLLLSIPHSDLLDYPKLSQSYYSLLEVLTQDHMNFI 905
SYVNFGVFRLYGDDALDNALQTFIKLLLSIPHSDLLDYPKLSQSYYSLLEVLTQDHMNFI
Sbjct: 847 SYVNFGVFRLYGDDALDNALQTFIKLLLSIPHSDLLDYPKLSQSYYSLLEVLTQDHMNFI 906
Query: 906 ASLEPHVIMYILSSISEGLTALDTMVCTGCCSCLDHIVTYLFKQLSRSTKKRTTPLNQES 965
ASLEPHVIMYILSSISEGLTALDTMVCTGCCSCLDHIVTYLFKQLSRSTKKRTTPLNQES
Sbjct: 907 ASLEPHVIMYILSSISEGLTALDTMVCTGCCSCLDHIVTYLFKQLSRSTKKRTTPLNQES 966
Query: 966 DRFLHIMQQHPEMIQQMLSTVLNIIIFEDCRNQWSMSRPLLGLILLNEKYFSDLRNSIVN 1025
DRFLHIMQQHPEMIQQMLSTVLNIIIFEDCRNQWSMSRPLLGLILLNEKYFSDLRNSIVN
Sbjct: 967 DRFLHIMQQHPEMIQQMLSTVLNIIIFEDCRNQWSMSRPLLGLILLNEKYFSDLRNSIVN 1026
Query: 1026 SQPPEKQQAMHLCFENLMEGIERNLLTKNRDRFTQNLSAFRREVNDSMKNSTYGVNSNDM 1085
SQPPEKQQAMHLCFENLMEGIERNLLTKNRDRFTQNLSAFRREVNDSMKNSTYGVNSNDM
Sbjct: 1027 SQPPEKQQAMHLCFENLMEGIERNLLTKNRDRFTQNLSAFRREVNDSMKNSTYGVNSNDM 1086
Query: 1086 MS 1087
MS
Sbjct: 1087 MS 1088
>gi|12597633 RAN binding protein 17 [Homo sapiens]
Length = 1088
Score = 1502 bits (3888), Expect = 0.0
Identities = 723/1077 (67%), Positives = 896/1077 (83%), Gaps = 4/1077 (0%)
Query: 1 MADHVQSLAQLENLCKQLYETTDTTTRLQAEKALVEFTNSPDCLSKCQLLLERGSSSYSQ 60
MA H QSLA+LE LC LY TD T R++AEKAL+E +SP+CLSKCQLLLE+G++SY+Q
Sbjct: 1 MALHFQSLAELEVLCTHLYIGTDLTQRIEAEKALLELIDSPECLSKCQLLLEQGTTSYAQ 60
Query: 61 LLAATCLTKLVSRTNNPLPLEQRIDIRNYVLNYLATRPKLATFVTQALIQLYARITKLGW 120
LLAATCL+KLVSR + PLP+EQR+DIRNY+LNY+A++PKLA FV QALIQ+ A+ITKLGW
Sbjct: 61 LLAATCLSKLVSRVS-PLPVEQRMDIRNYILNYVASQPKLAPFVIQALIQVIAKITKLGW 119
Query: 121 FDCQKDDYVFRNAITDVTRFLQDSVEYCIIGVTILSQLTNEINQADTTHPLTKHRKIASS 180
F+ QKD +VFR I DV +FLQ +VE+CIIGV ILS+LT E+N D + P KHRKIA+S
Sbjct: 120 FEVQKDQFVFREIIADVKKFLQGTVEHCIIGVIILSELTQEMNLVDYSRPSAKHRKIATS 179
Query: 181 FRDSSLFDIFTLSCNLLKQASGKNLNLNDESQHGLLMQLLKLTHNCLNFDFIGTSTDESS 240
FRD+SL D+ L+C+LLK+ K LNL D+ Q L+MQ+LKL NCLNFDFIG+S DES+
Sbjct: 180 FRDTSLKDVLVLACSLLKEVFAKPLNLQDQCQQNLVMQVLKLVLNCLNFDFIGSSADESA 239
Query: 241 DDLCTVQIPTSWRSAFLDSSTLQLFFDLYHSIPPSFSPLVLSCLVQIASVRRSLFNNAER 300
DDLCTVQIPT+WR+ FL+ TL LFF+LYHS+PP S L LSCLVQ AS RRSLFN+ ER
Sbjct: 240 DDLCTVQIPTTWRTIFLEPETLDLFFNLYHSLPPLLSQLALSCLVQFASTRRSLFNSPER 299
Query: 301 AKFLSHLVDGVKRILENPQSLSDPNNYHEFCRLLARLKSNYQLGELVKVENYPEVIRLIA 360
AK+L +L+ GVKRILENPQ LSDP NYHEFCR LARLK+NYQLGELV V+ YPEVIRLIA
Sbjct: 300 AKYLGNLIKGVKRILENPQGLSDPGNYHEFCRFLARLKTNYQLGELVMVKEYPEVIRLIA 359
Query: 361 NFTVTSLQHWEFAPNSVHYLLSLWQRLAASVPYVKATEPHMLETYTPEVTKAYITSRLES 420
NFT+TSLQHWEFAPNSVHYLL+LWQR+ ASVP+VK+TEPH+L+TY PE+TKA+ITSRL+S
Sbjct: 360 NFTITSLQHWEFAPNSVHYLLTLWQRMVASVPFVKSTEPHLLDTYAPEITKAFITSRLDS 419
Query: 421 VHIILRDGLEDPLEDTGLVQQQLDQLSTIGRCEYEKTCALLVQLFDQSAQSYQELLQSAS 480
V I++RD L+DPL+DT V QQL+QL T+ RCEYEKTCALLVQLFDQ+AQ+YQ+LL S
Sbjct: 420 VAIVVRDHLDDPLDDTATVFQQLEQLCTVSRCEYEKTCALLVQLFDQNAQNYQKLLHPYS 479
Query: 481 ASPMDIAVQEGRLTWLVYIIGAVIGGRVSFASTDEQDAMDGELVCRVLQLMNLTDSRLAQ 540
+DI +QEGRL WLVY++G V+GGR+++ STDE DAMDGEL CRV QL++L D+ L +
Sbjct: 480 GVTVDITIQEGRLAWLVYLVGTVVGGRLTYTSTDEHDAMDGELSCRVFQLISLMDTGLPR 539
Query: 541 AGNEKLELAMLSFFEQFRKIYIGDQVQKSSKLYRRLSEVLGLNDETMVLSVFIGKIITNL 600
NEK+ELA+L F +QFRK Y+GDQ+Q++SK+Y R+SEVLG+ D+ VL F+ KI+TNL
Sbjct: 540 CCNEKIELAILWFLDQFRKTYVGDQLQRTSKVYARMSEVLGITDDNHVLETFMTKIVTNL 599
Query: 601 KYWGRCEPITSKTLQLLNDLSIGYSSVRKLVKLSAVQFMLNNHTSEHFSFLGINNQSNLT 660
KYWGR EP+ S+TLQ LNDLS+GY ++KLVK+ AV+FML NHTSEHF FLGI++ +L+
Sbjct: 600 KYWGRYEPVISRTLQFLNDLSVGYILLKKLVKIDAVKFMLKNHTSEHFPFLGISDNHSLS 659
Query: 661 DMRCRTTFYTALGRLLMVDLGEDEDQYEQFMLPLTAAFEAVAQMFSTNSFNEQEAKRTLV 720
D RCRTTFYTAL RLLMVDLGEDED++E FMLPLT AFE V Q+F+ N+F +++ KR L+
Sbjct: 660 DFRCRTTFYTALTRLLMVDLGEDEDEFENFMLPLTVAFETVLQIFN-NNFKQEDVKRMLI 718
Query: 721 GLVRDLRGIAFAFNAKTSFMMLFEWIYPSYMPILQRAIELWYHDPACTTPVLKLMAELVH 780
GL RDLRGIAFA N KTS+ MLF+W+YP+Y+P+LQ A+E WY +P CTTP+LKLMAEL+
Sbjct: 719 GLARDLRGIAFALNTKTSYTMLFDWMYPTYLPLLQNAVERWYGEPTCTTPILKLMAELMQ 778
Query: 781 NRSQRLQFDVSSPNGILLFRETSKMITMYGNRILTLGEVPKDQVYALKLKGISICFSMLK 840
NRSQRL FDVSSPNGILLFRE SKM+ YGN+IL+LG + KDQ+Y +KLKGISIC+S LK
Sbjct: 779 NRSQRLNFDVSSPNGILLFREASKMVCTYGNQILSLGSLSKDQIYPMKLKGISICYSALK 838
Query: 841 AALSGSYVNFGVFRLYGDDALDNALQTFIKLLLSIPHSDLLDYPKLSQSYYSLLEVLTQD 900
+AL G+YV+FGVF+LYGD+ DN LQ F+K+LLS+ HSDLL Y KLSQSYY LLE LTQD
Sbjct: 839 SALCGNYVSFGVFKLYGDNHFDNVLQAFVKMLLSVSHSDLLQYRKLSQSYYPLLECLTQD 898
Query: 901 HMNFIASLEPHVIMYILSSISEGLTALDTMVCTGCCSCLDHIVTYLFKQLSRSTKK--RT 958
HM+FI +LEP V+MY+L+SISEGLT LDT+V + CC+ LD+IVTYLFK +++ KK R
Sbjct: 899 HMSFIINLEPPVLMYVLTSISEGLTTLDTVVSSSCCTSLDYIVTYLFKHIAKEGKKPLRC 958
Query: 959 TPLNQESDRFLHIMQQHPEMIQQMLSTVLNIIIFEDCRNQWSMSRPLLGLILLNEKYFSD 1018
Q R LH MQQ+P+++QQM+S ++N I+FEDCRNQWS+SRPLLGLILLNEKYFS+
Sbjct: 959 REATQAGQRLLHFMQQNPDVLQQMMSVLMNTIVFEDCRNQWSVSRPLLGLILLNEKYFSE 1018
Query: 1019 LRNSIVNSQPPEKQQAMHLCFENLMEGIERNLLTKNRDRFTQNLSAFRREVNDSMKN 1075
LR S++NSQP KQ+ + CF NLMEG+E+NL KNRDRFTQNLS FRR+V +++++
Sbjct: 1019 LRASLINSQPLPKQEVLAQCFRNLMEGVEQNLSVKNRDRFTQNLSVFRRDVAEALRS 1075
>gi|148886661 exportin 4 [Homo sapiens]
Length = 1151
Score = 115 bits (288), Expect = 2e-25
Identities = 231/1182 (19%), Positives = 450/1182 (38%), Gaps = 169/1182 (14%)
Query: 8 LAQLENLCKQLY---ETTDTTTRLQAEKALVEFTNSPDCLSKCQLLLERGSSSYSQLLAA 64
+AQLEN K L + R AE + F S + C+ +LE Y AA
Sbjct: 12 IAQLENAAKVLMAPPSMVNNEQRQHAEHIFLSFRKSKSPFAVCKHILETSKVDYVLFQAA 71
Query: 65 TCLTKLVSRTNNPLPLEQRIDIRNYVLNYLATRPKLATFVTQALIQLYARITKLGWFDCQ 124
T + + V R L +R ++L Y+ RP L +V + ++ A I K G D
Sbjct: 72 TAIMEAVVREWILLEKGSIESLRTFLLTYVLQRPNLQKYVREQILLAVAVIVKRGSLDKS 131
Query: 125 KDDYVFRNAITDVTRFLQDSVE--YCIIGVTILSQLTNEINQADTTHPLTKHRKIASSFR 182
D + ++ + +V+ C I +LS+ ++ ++ + H F+
Sbjct: 132 IDCKSIFHEVSQLISSGNPTVQTLACSILTALLSEFSSSSKTSNIGLSMEFHGNCKRVFQ 191
Query: 183 DSSLFDIFTLSCNLLKQASGKNLNLNDESQHGLLMQLLKLTHNCLNFDFIGTSTD----- 237
+ L IF L+ +L++ S + NLN + + + L L + L+++F+ +
Sbjct: 192 EEDLRQIFMLTVEVLQEFSRRE-NLNAQ-MSSVFQRYLALANQVLSWNFLPPNLGRHYIA 249
Query: 238 --ESSDDLCTVQIPTSWRSAFLDSSTLQLFFDLYHSI--PPSFSPLVLSCLVQIASVRRS 293
ESS ++ ++ SWR LDS ++LFF ++ I + L CL Q+AS+
Sbjct: 250 MFESSQNV-LLKPTESWRETLLDSRVMELFFTVHRKIREDSDMAQDSLQCLAQLASLHGP 308
Query: 294 LF-NNAERAKFLSHLVDGVKRILENPQSLSD-----------------PNN--------- 326
+F + + +L+H ++G+ + N + D P N
Sbjct: 309 IFPDEGSQVDYLAHFIEGLLNTI-NGIEIEDSEAVGISSIISNLITVFPRNVLTAIPSEL 367
Query: 327 YHEFCRLLARLKSNY-QLGELVKVENYPEVIRLIANFTVTSLQHW-EFAPNSVHYLLSLW 384
+ F L L ++ + L +V + +++ + A + L+ W + H+ +
Sbjct: 368 FSSFVNCLTHLTCSFGRSAALEEVLDKDDMVYMEAYDKL--LESWLTLVQDDKHFHKGFF 425
Query: 385 QRLAASVPYVKATEPHM-LETYTPEVTKAYITSRLESVHIILRDGLEDPLEDTGLVQQQL 443
+ A V + + H+ T +T + SR E L++ D D QL
Sbjct: 426 TQHAVQV-FNSYIQCHLAAPDGTRNLTANGVASREEEEISELQEDDRDQFSD------QL 478
Query: 444 DQLSTIGRCEYEKTCALLVQLFD--------QSAQSYQELLQSASASPMDIAVQEG---R 492
+ +GR E LL L + Q + Q+LL S +S +D + +
Sbjct: 479 ASVGMLGRIAAEHCIPLLTSLLEERVTRLHGQLQRHQQQLLASPGSSTVDNKMLDDLYED 538
Query: 493 LTWLVYIIGAVI----------------------GGRVSFASTDEQDAMDGE-------- 522
+ WL+ + G ++ V +T + GE
Sbjct: 539 IHWLILVTGYLLADDTQGETPLIPPEIMEYSIKHSSEVDINTTLQILGSPGEKASSIPGY 598
Query: 523 --------LVCRVLQLMNLTDSRLAQAGNEKLELAMLSFFEQFRKIYIGDQVQKSSKLYR 574
L+ +L++ + + L M F K + + KLY
Sbjct: 599 NRTDSVIRLLSAILRVSEVESRAIRADLTHLLSPQMGKDIVWFLKRWAKTYLLVDEKLYD 658
Query: 575 RL----SEVLGLNDE--TMVLSVFIGKIITNLKYWGRCEPITSKTLQLLNDLSIGYSSVR 628
++ S G + E ++ + K+I+NL W + + + T+QLL L V
Sbjct: 659 QISLPFSTAFGADTEGSQWIIGYLLQKVISNLSVWSSEQDLANDTVQLLVTL------VE 712
Query: 629 KLVKLSAVQFMLNNHTSEHFSFLGINNQSNLTDMRCRTTFYTA--LGRLLMVDLGEDEDQ 686
+ + + V N + F + N + T A LG +D +
Sbjct: 713 RRERANLV-IQCENWWNLAKQFASRSPPLNFLSSPVQRTLMKALVLGGFAHMDTETKQQY 771
Query: 687 YEQFMLPLTAAF-EAVAQMFSTNSFNEQEAKRTLVGLVRDLRGIAFAFNAKTSFMMLFEW 745
+ + + PL F + Q ++E K+ + + L GIA A + +LF +
Sbjct: 772 WTEVLQPLQQRFLRVINQENFQQMCQQEEVKQEITATLEALCGIAEATQI-DNVAILFNF 830
Query: 746 IYPSYMPILQRAIELWYHDPACTTPVLKLMAELVHNRSQRLQFDVSSPNGILLFRETSKM 805
+ ++ +E++ + P ++++ E+ H + L + L+ +
Sbjct: 831 LM-DFLTNCIGLMEVYKNTPETVNLIIEVFVEVAHKQICYL----GESKAMNLYEACLTL 885
Query: 806 ITMYGNRIL---TLGEVPKDQVYALKLKGISICFSMLKAALSGSYVNFG----VFRLYGD 858
+ +Y L + +++ Y + + + +L LS +++F VFR +
Sbjct: 886 LQVYSKNNLGRQRIDVTAEEEQY----QDLLLIMELLTNLLSKEFIDFSDTDEVFRGHEP 941
Query: 859 DALDN-------ALQTFIKLLLSIPHSDLLDYPKLSQSYYSLLEVLTQDHMNFIASLEPH 911
N + + L+L + DLL +P L YY L+ + + I L
Sbjct: 942 GQAANRSVSAADVVLYGVNLILPLMSQDLLKFPTLCNQYYKLITFICEIFPEKIPQLPED 1001
Query: 912 VIMYILSSISEGLTALDTMVCTGCCSCLDHIVTYLFKQLSRSTKKRTTPLNQESDRFLHI 971
+ ++ S+ G+T++ + VC C L T L +Q +++ QE+D L +
Sbjct: 1002 LFKSLMYSLELGMTSMSSEVCQLCLEAL----TPLAEQCAKA---------QETDSPLFL 1048
Query: 972 MQQHPEMIQQMLSTVLNIIIFEDCRNQWSMS--RPLLGLILLNEKYFSDLRNSIVNS-QP 1028
+H L V ++++ + + + + L+ L++ +S+L ++++S Q
Sbjct: 1049 ATRH------FLKLVFDMLVLQKHNTEMTTAAGEAFYTLVCLHQAEYSELVETLLSSQQD 1102
Query: 1029 PEKQQAMHLCFENL-MEGIERNLLTKNRDRFTQNLSAFRREV 1069
P Q + F L L K + F ++L F V
Sbjct: 1103 PVIYQRLADAFNKLTASSTPPTLDRKQKMAFLKSLEEFMANV 1144
>gi|4507943 exportin 1 [Homo sapiens]
Length = 1071
Score = 31.6 bits (70), Expect = 4.3
Identities = 36/185 (19%), Positives = 70/185 (37%), Gaps = 10/185 (5%)
Query: 11 LENLCKQLYETTDTTTRLQAEKALVEFTNSPDCLSKCQLLLERGSSSYSQLLAATCLTKL 70
L+N+ LY R+ A++ L PD ++ +LE + ++ L +
Sbjct: 28 LDNVVNCLYHGEGAQQRM-AQEVLTHLKEHPDAWTRVDTILEFSQNMNTKYYGLQILENV 86
Query: 71 VSRTNNPLPLEQRIDIRNYVLNYLATRPKLATFVTQ------ALIQLYARITKLGWFDCQ 124
+ LP Q I+ YV+ + T V + L + +I K W
Sbjct: 87 IKTRWKILPRNQCEGIKKYVVGLIIKTSSDPTCVEKEKVYIGKLNMILVQILKQEW---P 143
Query: 125 KDDYVFRNAITDVTRFLQDSVEYCIIGVTILSQLTNEINQADTTHPLTKHRKIASSFRDS 184
K F + I +R + + ++ + +LS+ + + T +KH K + S
Sbjct: 144 KHWPTFISDIVGASRTSESLCQNNMVILKLLSEEVFDFSSGQITQVKSKHLKDSMCNEFS 203
Query: 185 SLFDI 189
+F +
Sbjct: 204 QIFQL 208
>gi|127139033 cytochrome P450 reductase [Homo sapiens]
Length = 680
Score = 31.6 bits (70), Expect = 4.3
Identities = 45/182 (24%), Positives = 83/182 (45%), Gaps = 23/182 (12%)
Query: 171 LTKHRKIASSFRDSSLFDIFTLSCNLLKQASGKNLNLNDESQHGLLMQLLKLTHNCLNFD 230
+T +RK+ + +S + ++ SG ++ + + L+ QL K+ L+
Sbjct: 289 VTTNRKLNQGTERHLMHLELDISDSKIRYESGDHVAVYPANDSALVNQLGKILGADLDVV 348
Query: 231 FIGTSTDESSDDLCTVQIPTSWRSAFLDSSTLQLFFDLYHSIPPSFSPLVLSCLVQIAS- 289
+ DE S+ PTS+R+A L + D+ + PP + VL L Q AS
Sbjct: 349 MSLNNLDEESNKKHPFPCPTSYRTA------LTYYLDITN--PPRTN--VLYELAQYASE 398
Query: 290 ------VRRSLFNNAE-RAKFLSHLVDG---VKRILENPQSLSDPNNYHEFCRLLARLKS 339
+R+ ++ E + +LS +V+ + IL++ SL P ++ C LL RL++
Sbjct: 399 PSEQELLRKMASSSGEGKELYLSWVVEARRHILAILQDCPSLRPPIDH--LCELLPRLQA 456
Query: 340 NY 341
Y
Sbjct: 457 RY 458
>gi|23097308 spectrin repeat containing, nuclear envelope 1 isoform 2
[Homo sapiens]
Length = 8749
Score = 31.2 bits (69), Expect = 5.6
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
Query: 911 HVIMYILSSISEGLTALDTMVCTGCCSCLDHIVTYLFKQLSRSTKKRTTPLNQESDRFLH 970
H + IL S+S+G + LD + G + +L KQ+ S +++ T N+E FL
Sbjct: 2454 HDLQNILDSVSDGQSKLDAVTQEG-----QTLYAHLSKQIVSSIQEQITKANEEFQAFLK 2508
Query: 971 IMQQHPEMIQQMLS 984
+ + +Q S
Sbjct: 2509 QCLKDKQALQDCAS 2522
>gi|154277116 spectrin repeat containing, nuclear envelope 1 isoform 1
[Homo sapiens]
Length = 8797
Score = 31.2 bits (69), Expect = 5.6
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
Query: 911 HVIMYILSSISEGLTALDTMVCTGCCSCLDHIVTYLFKQLSRSTKKRTTPLNQESDRFLH 970
H + IL S+S+G + LD + G + +L KQ+ S +++ T N+E FL
Sbjct: 2447 HDLQNILDSVSDGQSKLDAVTQEG-----QTLYAHLSKQIVSSIQEQITKANEEFQAFLK 2501
Query: 971 IMQQHPEMIQQMLS 984
+ + +Q S
Sbjct: 2502 QCLKDKQALQDCAS 2515
>gi|156104866 acyl-Coenzyme A oxidase 3 isoform b [Homo sapiens]
Length = 624
Score = 31.2 bits (69), Expect = 5.6
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 6/92 (6%)
Query: 215 LLMQLLKLTHNCLNFDFIGTSTDESSDDLCTVQIPTSWRSAFLDSSTLQLFFDLYH--SI 272
L+ LL+ T+ LN + S+D + + C V AF++ + +Q F + H S+
Sbjct: 521 LVCYLLRETYQKLNQEKRSGSSDFEARNKCQVSHGRPLALAFVELTVVQRFHEHVHQPSV 580
Query: 273 PPSFSPLV--LSCLVQIASVRR--SLFNNAER 300
PPS ++ LS L + S+ R +L AER
Sbjct: 581 PPSLRAVLGRLSALYALWSLSRHAALLYRAER 612
>gi|7662316 HIV-1 Vpr binding protein [Homo sapiens]
Length = 1507
Score = 30.8 bits (68), Expect = 7.3
Identities = 18/78 (23%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 1005 LLGLILLNEKYFSDLRNSIV--NSQPPEKQQAMHLCFENLMEGIERNLLTKNRDRFTQNL 1062
LL ++ N+ + + L N+ V + +PP A L + +M G+E ++ + ++ +NL
Sbjct: 74 LLRILFKNDDFMNALVNAYVMTSREPPLNTAACRLLLD-IMPGLETAVVFQEKEGIVENL 132
Query: 1063 SAFRREVNDSMKNSTYGV 1080
+ RE + ++ + G+
Sbjct: 133 FKWAREADQPLRTYSTGL 150
>gi|226442751 hypothetical protein LOC647309 [Homo sapiens]
Length = 334
Score = 30.8 bits (68), Expect = 7.3
Identities = 24/88 (27%), Positives = 36/88 (40%)
Query: 234 TSTDESSDDLCTVQIPTSWRSAFLDSSTLQLFFDLYHSIPPSFSPLVLSCLVQIASVRRS 293
T+T ESS D+ T + W + LD+ LQ S S PL C + A +
Sbjct: 24 TTTSESSVDVSTETWVSFWAAGLLDNRELQQAPQAQESFSDSNFPLPDLCSWEEAQLSSQ 83
Query: 294 LFNNAERAKFLSHLVDGVKRILENPQSL 321
L+ N + L + + R+ E L
Sbjct: 84 LYRNKQLQDTLVQKEEELARLHEENNHL 111
>gi|4506787 IQ motif containing GTPase activating protein 1 [Homo
sapiens]
Length = 1657
Score = 30.4 bits (67), Expect = 9.5
Identities = 30/137 (21%), Positives = 58/137 (42%), Gaps = 15/137 (10%)
Query: 382 SLWQRLAASVPYVKATEPHMLETYTPEVTKAYITSRLESVHIILRDGLEDPLEDTGLV-Q 440
++W++L++SV + E + Y E+ K + E+ I + ++ ++ LV Q
Sbjct: 474 TVWKQLSSSVTGLTNIEEENCQRYLDELMKLKAQAHAENNEFITWNDIQACVDHVNLVVQ 533
Query: 441 QQLDQLSTIGRC-------EYEKT-------CALLVQLFDQSAQSYQELLQSASASPMDI 486
++ +++ IG + +KT A L + + AQ YQ+ L A
Sbjct: 534 EEHERILAIGLINEALDEGDAQKTLQALQIPAAKLEGVLAEVAQHYQDTLIRAKREKAQE 593
Query: 487 AVQEGRLTWLVYIIGAV 503
E + WL I G +
Sbjct: 594 IQDESAVLWLDEIQGGI 610
>gi|21264592 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain
2 [Homo sapiens]
Length = 1704
Score = 30.4 bits (67), Expect = 9.5
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 6/53 (11%)
Query: 6 QSLAQLENLCKQLYETTDTTTRLQAEKALVEFTNSPDCLSKCQLLLERGSSSY 58
Q +Q LC LY+ ++L +EK L+E TN C +LE G SY
Sbjct: 887 QESSQSTFLCDFLYQAPSAASKLSSEKKLLEETNKKWC------VLEGGFLSY 933
>gi|7661566 integrator complex subunit 7 [Homo sapiens]
Length = 962
Score = 30.4 bits (67), Expect = 9.5
Identities = 35/169 (20%), Positives = 71/169 (42%), Gaps = 4/169 (2%)
Query: 332 RLLARLKSNYQLGELVKVENYPEVIRLIANFTVTSLQHWEFAPNSVHYLLSLWQRLAASV 391
R+L + + Q +L+ +E V L + + S A ++ L+ +LA
Sbjct: 365 RVLTNITVSCQEKDLLALEQ-DAVFGLESLLVLCSQDDSPGAQATLKIALNCMVKLAKGR 423
Query: 392 PYVKATEPHMLETYTPEVTKAYITSRLESVHIILRDGLEDPLEDTGLVQQQLDQLSTIGR 451
P++ + ++ET ++ A +R+ H + ++ P+ G++ ++ IGR
Sbjct: 424 PHLSQS---VVETLLTQLHSAQDAARILMCHCLAAIAMQLPVLGDGMLGDLMELYKVIGR 480
Query: 452 CEYEKTCALLVQLFDQSAQSYQELLQSASASPMDIAVQEGRLTWLVYII 500
+K LLV L + Q+ L S + + ++ W VY I
Sbjct: 481 SATDKQQELLVSLATVIFVASQKALSVESKAVIKQQLESVSNGWTVYRI 529
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.134 0.390
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,287,395
Number of Sequences: 37866
Number of extensions: 1405827
Number of successful extensions: 3430
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 3411
Number of HSP's gapped (non-prelim): 22
length of query: 1087
length of database: 18,247,518
effective HSP length: 113
effective length of query: 974
effective length of database: 13,968,660
effective search space: 13605474840
effective search space used: 13605474840
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.