Guide to the Human Genome
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Name: XPO7 Sequence: fasta or formatted (1096aa) NCBI GI: 154448894
Description:

exportin 7 isoform a

Referenced in:

Nucleus and Nucleolus
Ran and Rag

Other entries for this name:
alt prot [1087aa] exportin 7 isoform b
alt prot [1088aa] exportin 7 isoform c
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5         60           2
 C cysteine            2.2         24           2
 D aspartate           5.1         56           2
 E glutamate           5.5         60           1
 F phenylalanine       4.7         52           2
 G glycine             3.6         39           2
 H histidine           2.1         23           1
 I isoleucine          5.4         59           3
 K lysine              4.1         45           2
 L leucine            14.5        159           3
 M methionine          2.9         32           2
 N asparagine          5.2         57           2
 P proline             3.1         34           2
 Q glutamine           5.8         64           3
 R arginine            5.0         55           2
 S serine              9.0         99           3
 T threonine           6.6         72           3
 V valine              5.4         59           1
 W tryptophan          0.8          9           1
 Y tyrosine            3.5         38           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   exportin 7 isoform a 
XPO7                  0.989   exportin 7 isoform b 
XPO7                  0.984   exportin 7 isoform c 
RANBP17               0.687   RAN binding protein 17 
XPO4                  0.041   exportin 4 
POR                   0.003   cytochrome P450 reductase 
SYNE1                 0.003   spectrin repeat containing, nuclear envelope 1 isofo...
SYNE1                 0.003   spectrin repeat containing, nuclear envelope 1 isof...
ACOX3                 0.003   acyl-Coenzyme A oxidase 3 isoform b 
VPRBP                 0.003   HIV-1 Vpr binding protein 
LOC647309             0.003   hypothetical protein LOC647309 
IQGAP1                0.002   IQ motif containing GTPase activating protein 1 [Homo...
ARAP2                 0.002   ArfGAP with RhoGAP domain, ankyrin repeat and PH dom...
INTS7                 0.002   integrator complex subunit 7 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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