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Search of human proteins with 153251297
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|153251297 hypothetical protein LOC55319 [Homo sapiens]
(203 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|153251297 hypothetical protein LOC55319 [Homo sapiens] 410 e-115
gi|50897852 coiled-coil domain containing 88A isoform 2 [Homo sa... 37 0.009
gi|208022632 coiled-coil domain containing 88A isoform 1 [Homo s... 37 0.009
gi|41322923 plectin 1 isoform 11 [Homo sapiens] 37 0.015
gi|41322914 plectin 1 isoform 10 [Homo sapiens] 37 0.015
gi|41322919 plectin 1 isoform 8 [Homo sapiens] 37 0.015
gi|41322910 plectin 1 isoform 7 [Homo sapiens] 37 0.015
gi|41322916 plectin 1 isoform 6 [Homo sapiens] 37 0.015
gi|41322908 plectin 1 isoform 3 [Homo sapiens] 37 0.015
gi|41322912 plectin 1 isoform 2 [Homo sapiens] 37 0.015
gi|47607492 plectin 1 isoform 1 [Homo sapiens] 37 0.015
gi|30039710 pancreas specific transcription factor, 1a [Homo sap... 35 0.057
gi|51317366 myosin XVIIIB [Homo sapiens] 33 0.13
gi|221219020 NYD-SP11 protein [Homo sapiens] 33 0.17
gi|171906582 coiled-coil domain containing 47 [Homo sapiens] 33 0.17
gi|41327691 kinesin-like motor protein C20orf23 [Homo sapiens] 33 0.22
gi|21264558 stromal membrane-associated GTPase-activating protei... 32 0.37
gi|122937396 coiled-coil domain containing 150 [Homo sapiens] 32 0.37
gi|111955084 5-azacytidine induced 1 isoform a [Homo sapiens] 32 0.37
gi|225579095 S-phase cyclin A-associated protein in the ER isofo... 32 0.48
gi|225579092 S-phase cyclin A-associated protein in the ER isofo... 32 0.48
gi|63054848 coiled-coil domain containing 34 isoform 1 [Homo sap... 32 0.48
gi|154354990 ankyrin repeat domain 26 [Homo sapiens] 32 0.48
gi|7661960 Rough Deal homolog, centromere/kinetochore protein [H... 31 0.63
gi|56549694 enabled homolog isoform a [Homo sapiens] 31 0.63
gi|39930375 enabled homolog isoform b [Homo sapiens] 31 0.63
gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin ... 31 0.63
gi|32484977 angiomotin like 2 [Homo sapiens] 30 1.1
gi|24308303 SH3-binding domain protein 5-like [Homo sapiens] 30 1.4
gi|8922950 meiosis-specific nuclear structural 1 [Homo sapiens] 30 1.8
>gi|153251297 hypothetical protein LOC55319 [Homo sapiens]
Length = 203
Score = 410 bits (1055), Expect = e-115
Identities = 203/203 (100%), Positives = 203/203 (100%)
Query: 1 MPKAPKGKSAGREKKVIHPYSRKAAQITREAHKQEKKEKLKNEKALRLNLVGEKLQWFQN 60
MPKAPKGKSAGREKKVIHPYSRKAAQITREAHKQEKKEKLKNEKALRLNLVGEKLQWFQN
Sbjct: 1 MPKAPKGKSAGREKKVIHPYSRKAAQITREAHKQEKKEKLKNEKALRLNLVGEKLQWFQN 60
Query: 61 HLDPQKKRYSKKDACELIERYLNRFSSELEQIELHNSIRDRQGRRHCSRETVIKQTMERE 120
HLDPQKKRYSKKDACELIERYLNRFSSELEQIELHNSIRDRQGRRHCSRETVIKQTMERE
Sbjct: 61 HLDPQKKRYSKKDACELIERYLNRFSSELEQIELHNSIRDRQGRRHCSRETVIKQTMERE 120
Query: 121 RQQFEGYGLEIPDILNASNLKTFREWDFDLKKLPNIKMRKICANDAIPKTCKRKTIITVD 180
RQQFEGYGLEIPDILNASNLKTFREWDFDLKKLPNIKMRKICANDAIPKTCKRKTIITVD
Sbjct: 121 RQQFEGYGLEIPDILNASNLKTFREWDFDLKKLPNIKMRKICANDAIPKTCKRKTIITVD 180
Query: 181 QDLGELELNDESSDSDEEMTAVA 203
QDLGELELNDESSDSDEEMTAVA
Sbjct: 181 QDLGELELNDESSDSDEEMTAVA 203
>gi|50897852 coiled-coil domain containing 88A isoform 2 [Homo
sapiens]
Length = 1843
Score = 37.4 bits (85), Expect = 0.009
Identities = 48/203 (23%), Positives = 93/203 (45%), Gaps = 33/203 (16%)
Query: 14 KKVIHPYSRK---AAQITREAHKQEKKEKLKNEKALRLNLVGEKLQWFQNHLDPQKKRYS 70
KK + Y K A ++ E H EK+ +L +K L + EK++ + + + +R +
Sbjct: 614 KKELEHYKEKGERAEELENELHHLEKENELLQKKITNLKITCEKIEALEQE-NSELEREN 672
Query: 71 KKDACELIERYLNRFSS---ELEQIELHNSIRDRQG---RRHCSRETVIKQTMERERQQF 124
+K +++ L+ F + +LE +E NS D + RR+ E++ +M+ + Q
Sbjct: 673 RK-----LKKTLDSFKNLTFQLESLEKENSQLDEENLELRRNV--ESLKCASMKMAQLQL 725
Query: 125 EGYGLEIP--------DILNASNLKTFR-EWDFDLKKLPNIKMRKICANDAIPKTCKRKT 175
E LE ++L AS KT R E + + N +++K N K
Sbjct: 726 ENKELESEKEQLKKGLELLKASFKKTERLEVSYQGLDIENQRLQKTLEN-------SNKK 778
Query: 176 IITVDQDLGELELNDESSDSDEE 198
I ++ +L +LE+ +++ + E
Sbjct: 779 IQQLESELQDLEMENQTLQKNLE 801
>gi|208022632 coiled-coil domain containing 88A isoform 1 [Homo
sapiens]
Length = 1870
Score = 37.4 bits (85), Expect = 0.009
Identities = 48/203 (23%), Positives = 93/203 (45%), Gaps = 33/203 (16%)
Query: 14 KKVIHPYSRK---AAQITREAHKQEKKEKLKNEKALRLNLVGEKLQWFQNHLDPQKKRYS 70
KK + Y K A ++ E H EK+ +L +K L + EK++ + + + +R +
Sbjct: 614 KKELEHYKEKGERAEELENELHHLEKENELLQKKITNLKITCEKIEALEQE-NSELEREN 672
Query: 71 KKDACELIERYLNRFSS---ELEQIELHNSIRDRQG---RRHCSRETVIKQTMERERQQF 124
+K +++ L+ F + +LE +E NS D + RR+ E++ +M+ + Q
Sbjct: 673 RK-----LKKTLDSFKNLTFQLESLEKENSQLDEENLELRRNV--ESLKCASMKMAQLQL 725
Query: 125 EGYGLEIP--------DILNASNLKTFR-EWDFDLKKLPNIKMRKICANDAIPKTCKRKT 175
E LE ++L AS KT R E + + N +++K N K
Sbjct: 726 ENKELESEKEQLKKGLELLKASFKKTERLEVSYQGLDIENQRLQKTLEN-------SNKK 778
Query: 176 IITVDQDLGELELNDESSDSDEE 198
I ++ +L +LE+ +++ + E
Sbjct: 779 IQQLESELQDLEMENQTLQKNLE 801
>gi|41322923 plectin 1 isoform 11 [Homo sapiens]
Length = 4547
Score = 36.6 bits (83), Expect = 0.015
Identities = 28/99 (28%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Query: 25 AQITREAHKQEKKEKLKNEKALRLNLVGEKLQWFQNHLDPQKKRYSKKDACELIERYLNR 84
A++ RE K +++ KL K+ + V ++ Q Q Q+ S+KD+ ER++ +
Sbjct: 2453 AELEREKEKLQQEAKLLQLKSEEMQTVQQE-QLLQETQALQQSFLSEKDSLLQRERFIEQ 2511
Query: 85 FSSELEQIELHNSIRDRQGRRHCSRETVIKQTMERERQQ 123
++LEQ+ + +Q R R+ +Q ME+ERQ+
Sbjct: 2512 EKAKLEQLFQDEVAKAQQLREEQQRQ---QQQMEQERQR 2547
>gi|41322914 plectin 1 isoform 10 [Homo sapiens]
Length = 4551
Score = 36.6 bits (83), Expect = 0.015
Identities = 28/99 (28%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Query: 25 AQITREAHKQEKKEKLKNEKALRLNLVGEKLQWFQNHLDPQKKRYSKKDACELIERYLNR 84
A++ RE K +++ KL K+ + V ++ Q Q Q+ S+KD+ ER++ +
Sbjct: 2457 AELEREKEKLQQEAKLLQLKSEEMQTVQQE-QLLQETQALQQSFLSEKDSLLQRERFIEQ 2515
Query: 85 FSSELEQIELHNSIRDRQGRRHCSRETVIKQTMERERQQ 123
++LEQ+ + +Q R R+ +Q ME+ERQ+
Sbjct: 2516 EKAKLEQLFQDEVAKAQQLREEQQRQ---QQQMEQERQR 2551
>gi|41322919 plectin 1 isoform 8 [Homo sapiens]
Length = 4547
Score = 36.6 bits (83), Expect = 0.015
Identities = 28/99 (28%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Query: 25 AQITREAHKQEKKEKLKNEKALRLNLVGEKLQWFQNHLDPQKKRYSKKDACELIERYLNR 84
A++ RE K +++ KL K+ + V ++ Q Q Q+ S+KD+ ER++ +
Sbjct: 2453 AELEREKEKLQQEAKLLQLKSEEMQTVQQE-QLLQETQALQQSFLSEKDSLLQRERFIEQ 2511
Query: 85 FSSELEQIELHNSIRDRQGRRHCSRETVIKQTMERERQQ 123
++LEQ+ + +Q R R+ +Q ME+ERQ+
Sbjct: 2512 EKAKLEQLFQDEVAKAQQLREEQQRQ---QQQMEQERQR 2547
>gi|41322910 plectin 1 isoform 7 [Homo sapiens]
Length = 4515
Score = 36.6 bits (83), Expect = 0.015
Identities = 28/99 (28%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Query: 25 AQITREAHKQEKKEKLKNEKALRLNLVGEKLQWFQNHLDPQKKRYSKKDACELIERYLNR 84
A++ RE K +++ KL K+ + V ++ Q Q Q+ S+KD+ ER++ +
Sbjct: 2421 AELEREKEKLQQEAKLLQLKSEEMQTVQQE-QLLQETQALQQSFLSEKDSLLQRERFIEQ 2479
Query: 85 FSSELEQIELHNSIRDRQGRRHCSRETVIKQTMERERQQ 123
++LEQ+ + +Q R R+ +Q ME+ERQ+
Sbjct: 2480 EKAKLEQLFQDEVAKAQQLREEQQRQ---QQQMEQERQR 2515
>gi|41322916 plectin 1 isoform 6 [Homo sapiens]
Length = 4684
Score = 36.6 bits (83), Expect = 0.015
Identities = 28/99 (28%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Query: 25 AQITREAHKQEKKEKLKNEKALRLNLVGEKLQWFQNHLDPQKKRYSKKDACELIERYLNR 84
A++ RE K +++ KL K+ + V ++ Q Q Q+ S+KD+ ER++ +
Sbjct: 2590 AELEREKEKLQQEAKLLQLKSEEMQTVQQE-QLLQETQALQQSFLSEKDSLLQRERFIEQ 2648
Query: 85 FSSELEQIELHNSIRDRQGRRHCSRETVIKQTMERERQQ 123
++LEQ+ + +Q R R+ +Q ME+ERQ+
Sbjct: 2649 EKAKLEQLFQDEVAKAQQLREEQQRQ---QQQMEQERQR 2684
>gi|41322908 plectin 1 isoform 3 [Homo sapiens]
Length = 4525
Score = 36.6 bits (83), Expect = 0.015
Identities = 28/99 (28%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Query: 25 AQITREAHKQEKKEKLKNEKALRLNLVGEKLQWFQNHLDPQKKRYSKKDACELIERYLNR 84
A++ RE K +++ KL K+ + V ++ Q Q Q+ S+KD+ ER++ +
Sbjct: 2431 AELEREKEKLQQEAKLLQLKSEEMQTVQQE-QLLQETQALQQSFLSEKDSLLQRERFIEQ 2489
Query: 85 FSSELEQIELHNSIRDRQGRRHCSRETVIKQTMERERQQ 123
++LEQ+ + +Q R R+ +Q ME+ERQ+
Sbjct: 2490 EKAKLEQLFQDEVAKAQQLREEQQRQ---QQQMEQERQR 2525
>gi|41322912 plectin 1 isoform 2 [Homo sapiens]
Length = 4533
Score = 36.6 bits (83), Expect = 0.015
Identities = 28/99 (28%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Query: 25 AQITREAHKQEKKEKLKNEKALRLNLVGEKLQWFQNHLDPQKKRYSKKDACELIERYLNR 84
A++ RE K +++ KL K+ + V ++ Q Q Q+ S+KD+ ER++ +
Sbjct: 2439 AELEREKEKLQQEAKLLQLKSEEMQTVQQE-QLLQETQALQQSFLSEKDSLLQRERFIEQ 2497
Query: 85 FSSELEQIELHNSIRDRQGRRHCSRETVIKQTMERERQQ 123
++LEQ+ + +Q R R+ +Q ME+ERQ+
Sbjct: 2498 EKAKLEQLFQDEVAKAQQLREEQQRQ---QQQMEQERQR 2533
>gi|47607492 plectin 1 isoform 1 [Homo sapiens]
Length = 4574
Score = 36.6 bits (83), Expect = 0.015
Identities = 28/99 (28%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Query: 25 AQITREAHKQEKKEKLKNEKALRLNLVGEKLQWFQNHLDPQKKRYSKKDACELIERYLNR 84
A++ RE K +++ KL K+ + V ++ Q Q Q+ S+KD+ ER++ +
Sbjct: 2480 AELEREKEKLQQEAKLLQLKSEEMQTVQQE-QLLQETQALQQSFLSEKDSLLQRERFIEQ 2538
Query: 85 FSSELEQIELHNSIRDRQGRRHCSRETVIKQTMERERQQ 123
++LEQ+ + +Q R R+ +Q ME+ERQ+
Sbjct: 2539 EKAKLEQLFQDEVAKAQQLREEQQRQ---QQQMEQERQR 2574
>gi|30039710 pancreas specific transcription factor, 1a [Homo
sapiens]
Length = 328
Score = 34.7 bits (78), Expect = 0.057
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 21 SRKAAQITREAHKQEKKEKLKNEKALRLNLVGEKLQWFQNHLD--PQKKRYSKKDACELI 78
+R+ ++ EA Q+ ++ + R+ + + + ++H+ P +KR SK D L
Sbjct: 149 ARRRRRVRSEAELQQLRQAANVRERRRMQSINDAFEGLRSHIPTLPYEKRLSKVDTLRLA 208
Query: 79 ERYLNRFSSELEQIEL 94
Y+N F SEL Q +L
Sbjct: 209 IGYIN-FLSELVQADL 223
>gi|51317366 myosin XVIIIB [Homo sapiens]
Length = 2567
Score = 33.5 bits (75), Expect = 0.13
Identities = 39/172 (22%), Positives = 75/172 (43%), Gaps = 24/172 (13%)
Query: 23 KAAQITREAHKQEKKEKLKNEKALRLNLVGEKLQWFQNHLDPQKKRYSKKDACELIERYL 82
K ++T K EK EKL+NE +L+ K+ + D +R+ AC+++E
Sbjct: 1407 KEEELTTLRRKLEKSEKLRNELRQNTDLLESKIADLTS--DLADERFKGDVACQVLE--- 1461
Query: 83 NRFSSELEQIELHNSIRDRQGRRHCSRETV--IKQTMERERQQFEGYGLEIPDILNASNL 140
S E+++ +++ + + ++ + + + +E +Q+ + LE A
Sbjct: 1462 ---SERAERLQAFREVQELKSKHEQVQKKLGDVNKQLEEAQQKIQLNDLERNPTGGAD-- 1516
Query: 141 KTFREWD--FDLKKLPNIKMRK---ICANDAIPKTCKRKTIITVDQDLGELE 187
EW FD ++ N +RK C + RK + +Q LGEL+
Sbjct: 1517 ----EWQMRFDCAQMENEFLRKRLQQCEERLDSELTARKEL---EQKLGELQ 1561
>gi|221219020 NYD-SP11 protein [Homo sapiens]
Length = 2873
Score = 33.1 bits (74), Expect = 0.17
Identities = 42/190 (22%), Positives = 93/190 (48%), Gaps = 19/190 (10%)
Query: 8 KSAGREKKVIHPYSRKAAQITREAHKQEKKEKLKNEKALRLNLVGEKLQWFQNHLDPQKK 67
K+ +EKK + K AQ R+ + KE+L + K +L V KL F L ++
Sbjct: 1837 KNLAQEKKNLAQEKEKLAQ--RKENLLYNKERLTHSKK-QLVQVKNKLGMFNKILAQVEE 1893
Query: 68 RYSKKDACELIERYLNRFSSELEQIELHNSIRDRQGRRHCSR-ETVIKQTMERERQQFEG 126
+ +++ +I++ +E + +++ +S+ +Q + + + +++ M + +++ G
Sbjct: 1894 KLTQEKET-VIKKKEKLAETEKKLVQVEDSLAKKQEKLAQEKMKLALEKAMVQGKKRLRG 1952
Query: 127 YGLEIPDILNASNLKTFREWDFDLKKLPNIKMRKICANDAI-----PKTCKRKTIITVDQ 181
L+I A NL ++K+L KMR + + + P+T +++ + V+Q
Sbjct: 1953 E-LDIAKEEKALNL--------EMKRLAEEKMRLVEGKETLSKGETPETSRQRKMTQVEQ 2003
Query: 182 DLGELELNDE 191
+L E +L+ E
Sbjct: 2004 ELFERKLSLE 2013
>gi|171906582 coiled-coil domain containing 47 [Homo sapiens]
Length = 483
Score = 33.1 bits (74), Expect = 0.17
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 20/94 (21%)
Query: 3 KAPKGKSAGREK--KVIHPYSRKAAQITREAHKQEKKEKLKNEKALRLNLVGEKLQWFQN 60
KA K ++ E K+ H ++AAQ RE K+ +KE++ NE+
Sbjct: 405 KADKNRARVEENFLKLTHVQRQEAAQSRREEKKRAEKERIMNEE---------------- 448
Query: 61 HLDPQKKRYSKKDACELIERYLNRFSSELEQIEL 94
DP+K+R ++ A ++ L + +++QI++
Sbjct: 449 --DPEKQRRLEEAALRREQKKLEKKQMKMKQIKV 480
>gi|41327691 kinesin-like motor protein C20orf23 [Homo sapiens]
Length = 1317
Score = 32.7 bits (73), Expect = 0.22
Identities = 49/200 (24%), Positives = 82/200 (41%), Gaps = 32/200 (16%)
Query: 22 RKAAQITREAHKQEKK------EKLKNEKALRLNLVGEKLQWFQNHLDPQKKRYSKKDAC 75
R+ +I + +QE++ E+L+ K L N EK Q FQ QK++ +
Sbjct: 685 REQQEIELQKKRQEEETFLRVQEELQRLKELNNNEKAEKFQIFQELDQLQKEKDEQYAKL 744
Query: 76 ELIERYLNRFSSELEQI----ELHNSIRDRQGRRHCSRETVIKQTMERERQQFEGY---- 127
EL ++ L E EQ+ L +R++Q R + Q +E E++ EG
Sbjct: 745 ELEKKRLE--EQEKEQVMLVAHLEEQLREKQEMIQLLRRGEV-QWVEEEKRDLEGIRESL 801
Query: 128 ---------GLEIPDILNASNLKTFREWDFDLKKLPNIKMRKICANDAIPKTCKRKTIIT 178
G E + L + L+ F L KL N++ + D + K + + I
Sbjct: 802 LRVKEARAGGDEDGEELEKAQLRFFEFKRRQLVKLVNLEKDLVQQKDILKKEVQEEQEIL 861
Query: 179 V------DQDLGELELNDES 192
D++ LE +DES
Sbjct: 862 ECLKCEHDKESRLLEKHDES 881
>gi|21264558 stromal membrane-associated GTPase-activating protein 1
isoform B [Homo sapiens]
Length = 440
Score = 32.0 bits (71), Expect = 0.37
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Query: 20 YSRKAAQIT---REAHKQEKKEKLKNEKALRLNLVGEKLQWFQNHLDPQKKRYSKKDA 74
Y + A IT +E K+EKK + + EK + L EKLQ L+P+K KK A
Sbjct: 129 YDKNAIAITNKEKEKKKEEKKREKEPEKPAK-PLTAEKLQKKDQQLEPKKSTSPKKAA 185
>gi|122937396 coiled-coil domain containing 150 [Homo sapiens]
Length = 1101
Score = 32.0 bits (71), Expect = 0.37
Identities = 39/168 (23%), Positives = 70/168 (41%), Gaps = 35/168 (20%)
Query: 21 SRKAAQITREAHK--QEKKEKLKNEKA-LRLNLVG--------EKLQWFQNHLDPQ---K 66
+R+ Q E K + KEK+KN+K ++L+L E+++ + L K
Sbjct: 871 NRELRQKLAELEKILESNKEKIKNQKTQIKLHLSAKANNAQNIERMKQIEKELKQMELIK 930
Query: 67 KRYSKKD----------ACELIERYLNRFSSELEQIELHNSIRDRQGRRHCSRETVIKQT 116
+Y KK+ CE+ L + L + + S+R++Q H E I+Q
Sbjct: 931 DQYQKKNYEQSLSIQRFVCEMTN--LQKEMQMLAKSQYDASVRNKQQELHLEAERKIRQE 988
Query: 117 MERERQQFEGYGLEIPDILNASNLKTFREWDFDLKKLPNIKMRKICAN 164
+E Q+ E +LK +E + K +++ +I AN
Sbjct: 989 LENRCQELEE---------TVRHLKKCKEATENTLKEASVESEQITAN 1027
>gi|111955084 5-azacytidine induced 1 isoform a [Homo sapiens]
Length = 1080
Score = 32.0 bits (71), Expect = 0.37
Identities = 30/117 (25%), Positives = 54/117 (46%), Gaps = 10/117 (8%)
Query: 12 REKKVIHPYSRKAAQITREAHKQEKKEKLKNEKALRLNLVGEKLQWFQNHLDPQKKRYSK 71
REK+ + R+ A+ + H ++++ L+ ++ + V E+ + L Q R +
Sbjct: 758 REKEALGQQERERARQRFQQHLEQEQWALQQQRQRLYSEVAEE----RERLGQQAAR--Q 811
Query: 72 KDACELIERYLNRFSSELEQI---ELHNSIRDRQGRRHCSRETVIKQTMERERQQFE 125
+ E + + L SS L + E R+ Q RRH +KQ +E ERQ +E
Sbjct: 812 RAELEELRQQLEESSSALTRALRAEFEKG-REEQERRHQMELNTLKQQLELERQAWE 867
>gi|225579095 S-phase cyclin A-associated protein in the ER isoform
b [Homo sapiens]
Length = 1154
Score = 31.6 bits (70), Expect = 0.48
Identities = 26/110 (23%), Positives = 45/110 (40%), Gaps = 19/110 (17%)
Query: 13 EKKVIHPYSRKAAQITREAHKQEKKEKLKNEKALRLNLVGEKLQWFQNHLDPQKKRYSKK 72
E+K++H ++ Q+ K +++E NE A F N L+ Q KR+
Sbjct: 349 EEKLLHAEFKREVQLQAIVKKAQEEEAKVNEIA------------FINTLEAQNKRHDVL 396
Query: 73 DACELIERYLNRFSSELEQIELHNSIRDRQGRRHCSRETVIKQTMERERQ 122
+ E+ LN E ++ + RD + K+ +E ERQ
Sbjct: 397 SKLKEYEQRLNELQEERQRRQEEKQARDEAVQER-------KRALEAERQ 439
>gi|225579092 S-phase cyclin A-associated protein in the ER isoform
a [Homo sapiens]
Length = 1400
Score = 31.6 bits (70), Expect = 0.48
Identities = 26/110 (23%), Positives = 45/110 (40%), Gaps = 19/110 (17%)
Query: 13 EKKVIHPYSRKAAQITREAHKQEKKEKLKNEKALRLNLVGEKLQWFQNHLDPQKKRYSKK 72
E+K++H ++ Q+ K +++E NE A F N L+ Q KR+
Sbjct: 595 EEKLLHAEFKREVQLQAIVKKAQEEEAKVNEIA------------FINTLEAQNKRHDVL 642
Query: 73 DACELIERYLNRFSSELEQIELHNSIRDRQGRRHCSRETVIKQTMERERQ 122
+ E+ LN E ++ + RD + K+ +E ERQ
Sbjct: 643 SKLKEYEQRLNELQEERQRRQEEKQARDEAVQER-------KRALEAERQ 685
>gi|63054848 coiled-coil domain containing 34 isoform 1 [Homo
sapiens]
Length = 373
Score = 31.6 bits (70), Expect = 0.48
Identities = 36/148 (24%), Positives = 64/148 (43%), Gaps = 15/148 (10%)
Query: 11 GREKKVIHPYSRKAAQITREAHKQEKKEKLKNEKALRLNLVGEK-LQWFQNHLDPQKKRY 69
G+EK+ KA + E ++Q +K K E+ R + EK +W Q + ++K
Sbjct: 151 GKEKEERDRLQLKALE---ELNQQLEKRKEMEEREKRKIIAEEKHKEWVQKKNEQKRKER 207
Query: 70 SKKDACELIERYLNRFSSELEQIELHNSIRD---RQGRRHCSRETVIKQTMERERQQFEG 126
+K E+ E+ E Q + ++ ++ C R+ K+ E+E+QQ
Sbjct: 208 EQKINKEMEEKAAKELEKEYLQEKAKEKYQEWLKKKNAEECERK---KKEKEKEKQQ--- 261
Query: 127 YGLEIPDILNASNLKTFREWDFDLKKLP 154
EI + + K F+EW + K P
Sbjct: 262 -QAEIQEKKEIAE-KKFQEWLENAKHKP 287
>gi|154354990 ankyrin repeat domain 26 [Homo sapiens]
Length = 1710
Score = 31.6 bits (70), Expect = 0.48
Identities = 42/174 (24%), Positives = 76/174 (43%), Gaps = 24/174 (13%)
Query: 10 AGREKKVIHPYSRKAAQITREAHKQEKKEKLKNEKALRLNLVGEKLQWFQNHLDPQKKRY 69
A EK+ + R I+ H +E++ + +NEKA R +V +LQ Q D KK+
Sbjct: 1180 AESEKQSLLLEERNKELISECNHLKERQYQYENEKAER-EVVVRQLQ--QELADTLKKQS 1236
Query: 70 SKKDACELIERYLNRFSSELEQI-----ELHNSIRDRQGR-----RHCSRETVIKQTMER 119
+ + E+ RY E + + ++ N +++ Q R R + KQ +E+
Sbjct: 1237 MSEASLEVTSRYRINLEDETQDLKKKLGQIRNQLQEAQDRHTEAVRCAEKMQDHKQKLEK 1296
Query: 120 E--------RQQFEGYGLEIPDILNASNLKTFREWDFDLKKLPNIKMRKICAND 165
+ ++Q + ++LNA+ + +E LKKL +K C D
Sbjct: 1297 DNAKLKVTVKKQMDKIEELQKNLLNANLSEDEKE---QLKKLMELKQSLECNLD 1347
>gi|7661960 Rough Deal homolog, centromere/kinetochore protein [Homo
sapiens]
Length = 2209
Score = 31.2 bits (69), Expect = 0.63
Identities = 19/67 (28%), Positives = 30/67 (44%)
Query: 34 QEKKEKLKNEKALRLNLVGEKLQWFQNHLDPQKKRYSKKDACELIERYLNRFSSELEQIE 93
QE+ + K KA R+++ + + D QK KKD CE + + +S E E
Sbjct: 939 QEEPDHSKEGKAWRMSVAKTSVDILKILCDIQKDNLQKKDECEEMLKLFKEVASLQENFE 998
Query: 94 LHNSIRD 100
+ S D
Sbjct: 999 VFLSFED 1005
>gi|56549694 enabled homolog isoform a [Homo sapiens]
Length = 591
Score = 31.2 bits (69), Expect = 0.63
Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 59 QNHLDPQKKRYSKKDACELIERY-LNRFSSELEQIELHNSIRDRQGRRHCSRETVIKQTM 117
Q L+ Q+++ ++ + +ER L R E E++E R+R R +E + ++
Sbjct: 137 QEELEIQRRQLQEQQRQKELERERLERERMERERLERERLERERLERERLEQEQLERERQ 196
Query: 118 ERERQQ 123
ERERQ+
Sbjct: 197 ERERQE 202
>gi|39930375 enabled homolog isoform b [Homo sapiens]
Length = 570
Score = 31.2 bits (69), Expect = 0.63
Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 59 QNHLDPQKKRYSKKDACELIERY-LNRFSSELEQIELHNSIRDRQGRRHCSRETVIKQTM 117
Q L+ Q+++ ++ + +ER L R E E++E R+R R +E + ++
Sbjct: 137 QEELEIQRRQLQEQQRQKELERERLERERMERERLERERLERERLERERLEQEQLERERQ 196
Query: 118 ERERQQ 123
ERERQ+
Sbjct: 197 ERERQE 202
>gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin (with
transmembrane signal), 1 [Homo sapiens]
Length = 3259
Score = 31.2 bits (69), Expect = 0.63
Identities = 23/110 (20%), Positives = 52/110 (47%), Gaps = 9/110 (8%)
Query: 21 SRKAAQITREAHKQEKKEKLKNEKALRLNLVGEKLQWFQNHLDPQKKRYSKKDACELIER 80
S ++ ++ E ++K++ +K ++L+ + + E +W + H + QK+ + E +
Sbjct: 1568 SCESLKLALEGLTEDKEKLVKEIESLKSSKIAESTEWQEKHKELQKEYEILLQSYENVSN 1627
Query: 81 YLNRFSSELEQI-----ELHNSIRDRQGRRHCSRETVIKQTMERERQQFE 125
R +E + EL+ +R + + +ET KQ E E++ E
Sbjct: 1628 EAERIQHVVEAVRQEKQELYGKLRSTEANK---KETE-KQLQEAEQEMEE 1673
>gi|32484977 angiomotin like 2 [Homo sapiens]
Length = 780
Score = 30.4 bits (67), Expect = 1.1
Identities = 22/99 (22%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 22 RKAAQITREAHKQEKKEKLKNEKALRLNLVGEKLQWFQNHLDPQKKRYSKKDACELIERY 81
R+ A++ R+ + +++ + EKA R+ + ++Q + + SK++A E R
Sbjct: 319 RENARLQRDNERLQRELESSAEKAGRIEKLESEIQRLSEAHESLTRASSKREALEKTMR- 377
Query: 82 LNRFSSELEQIELHNSIRDRQGRRHCSRETVIKQTMERE 120
N+ SE+ +++ N RD + R + + +T E +
Sbjct: 378 -NKMDSEMRRLQDFN--RDLRERLESANRRLASKTQEAQ 413
>gi|24308303 SH3-binding domain protein 5-like [Homo sapiens]
Length = 393
Score = 30.0 bits (66), Expect = 1.4
Identities = 25/128 (19%), Positives = 56/128 (43%), Gaps = 10/128 (7%)
Query: 6 KGKSAGREKKVIHPYSRKAAQITREAHKQEKKEKLKNEKALRLNLVGEKLQWF------- 58
+G G + PY +A ++ +EA ++ +K L+ E+A+ ++ ++ +
Sbjct: 102 QGSHLGSCIEKARPYY-EARRLAKEAQQETQKAALRYERAVSMHNAAREMVFVAEQGVMA 160
Query: 59 -QNHLDPQKKRYSKKDACELIERYLNRFSSELEQIELHNSIRDRQGRRHCSRETVIKQTM 117
+N LDP + C++ E R E E + + + R ++T +++ +
Sbjct: 161 DKNRLDPTWQEMLNHATCKVNEAEEERLRGEREHQRVTRLCQQAEARVQALQKT-LRRAI 219
Query: 118 ERERQQFE 125
+ R FE
Sbjct: 220 GKSRPYFE 227
>gi|8922950 meiosis-specific nuclear structural 1 [Homo sapiens]
Length = 495
Score = 29.6 bits (65), Expect = 1.8
Identities = 23/105 (21%), Positives = 51/105 (48%), Gaps = 9/105 (8%)
Query: 20 YSRKAAQITREAHKQEKKEKLKNEKALRLNLVGEKLQWFQNHLDPQKKRYSKKDACELIE 79
Y + A+I + K+E ++KL+ +K ++ + Q L + +K++ +
Sbjct: 324 YQEEQAEIYKSKLKEEAEKKLRKQKEMKQDFEE------QMALKELVLQAAKEEEENFRK 377
Query: 80 RYLNRFSSELEQIELHNSIRDRQGRRHCSRETVIKQTMERERQQF 124
L +F+ + ++IEL N+ +Q + +++ +E RQQF
Sbjct: 378 TMLAKFAED-DRIELMNA--QKQRMKQLEHRRAVEKLIEERRQQF 419
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.131 0.371
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,472,386
Number of Sequences: 37866
Number of extensions: 317127
Number of successful extensions: 1235
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 74
Number of HSP's that attempted gapping in prelim test: 1163
Number of HSP's gapped (non-prelim): 147
length of query: 203
length of database: 18,247,518
effective HSP length: 97
effective length of query: 106
effective length of database: 14,574,516
effective search space: 1544898696
effective search space used: 1544898696
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.