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Search of human proteins with 151101191
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|151101191 interferon induced transmembrane protein 2 (1-8D)
[Homo sapiens]
(132 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|151101191 interferon induced transmembrane protein 2 (1-8D) [... 269 5e-73
gi|148612842 interferon-induced transmembrane protein 3 (1-8U) [... 244 2e-65
gi|150010589 interferon induced transmembrane protein 1 (9-27) [... 169 8e-43
gi|70608168 interferon induced transmembrane protein 5 [Homo sap... 83 6e-17
gi|156523246 proline-rich transmembrane protein 2 [Homo sapiens] 49 2e-06
gi|169178462 PREDICTED: similar to NG5 protein [Homo sapiens] 39 0.002
gi|113421234 PREDICTED: similar to NG5 protein [Homo sapiens] 39 0.002
gi|113420954 PREDICTED: similar to NG5 protein [Homo sapiens] 39 0.002
gi|110578657 LOST1 [Homo sapiens] 32 0.19
gi|77681565 NG5 protein [Homo sapiens] 31 0.32
gi|211904185 hypothetical protein LOC387890 [Homo sapiens] 31 0.32
gi|154707844 transmembrane protein 91 isoform a [Homo sapiens] 30 0.72
gi|39932581 hypothetical protein LOC55051 isoform 2 [Homo sapiens] 29 1.2
gi|39932583 hypothetical protein LOC55051 isoform 1 [Homo sapiens] 29 1.2
gi|194018542 hypothetical protein LOC84529 isoform 1 [Homo sapiens] 28 1.6
gi|14210512 hypothetical protein LOC84529 isoform 2 [Homo sapiens] 28 1.6
gi|18426913 drebrin 1 isoform b [Homo sapiens] 28 2.7
gi|18426915 drebrin 1 isoform a [Homo sapiens] 28 2.7
gi|24307933 transcription factor EB [Homo sapiens] 28 2.7
gi|155969714 nuclear protein, ataxia-telangiectasia locus [Homo... 27 3.6
gi|148225857 G protein-coupled receptor 34 [Homo sapiens] 27 4.7
gi|4885319 G protein-coupled receptor 34 [Homo sapiens] 27 4.7
>gi|151101191 interferon induced transmembrane protein 2 (1-8D)
[Homo sapiens]
Length = 132
Score = 269 bits (687), Expect = 5e-73
Identities = 132/132 (100%), Positives = 132/132 (100%)
Query: 1 MNHIVQTFSPVNSGQPPNYEMLKEEQEVAMLGVPHNPAPPMSTVIHIRSETSVPDHVVWS 60
MNHIVQTFSPVNSGQPPNYEMLKEEQEVAMLGVPHNPAPPMSTVIHIRSETSVPDHVVWS
Sbjct: 1 MNHIVQTFSPVNSGQPPNYEMLKEEQEVAMLGVPHNPAPPMSTVIHIRSETSVPDHVVWS 60
Query: 61 LFNTLFMNTCCLGFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWALILGIFMTILL 120
LFNTLFMNTCCLGFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWALILGIFMTILL
Sbjct: 61 LFNTLFMNTCCLGFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWALILGIFMTILL 120
Query: 121 IIIPVLVVQAQR 132
IIIPVLVVQAQR
Sbjct: 121 IIIPVLVVQAQR 132
>gi|148612842 interferon-induced transmembrane protein 3 (1-8U)
[Homo sapiens]
Length = 133
Score = 244 bits (622), Expect = 2e-65
Identities = 120/131 (91%), Positives = 123/131 (93%), Gaps = 1/131 (0%)
Query: 1 MNHIVQTF-SPVNSGQPPNYEMLKEEQEVAMLGVPHNPAPPMSTVIHIRSETSVPDHVVW 59
MNH VQTF SPVNSGQPPNYEMLKEE EVA+LG PHNPAPP STVIHIRSETSVPDHVVW
Sbjct: 1 MNHTVQTFFSPVNSGQPPNYEMLKEEHEVAVLGAPHNPAPPTSTVIHIRSETSVPDHVVW 60
Query: 60 SLFNTLFMNTCCLGFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWALILGIFMTIL 119
SLFNTLFMN CCLGFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWALILGI MTIL
Sbjct: 61 SLFNTLFMNPCCLGFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWALILGILMTIL 120
Query: 120 LIIIPVLVVQA 130
LI+IPVL+ QA
Sbjct: 121 LIVIPVLIFQA 131
>gi|150010589 interferon induced transmembrane protein 1 (9-27)
[Homo sapiens]
Length = 125
Score = 169 bits (427), Expect = 8e-43
Identities = 85/105 (80%), Positives = 91/105 (86%)
Query: 21 MLKEEQEVAMLGVPHNPAPPMSTVIHIRSETSVPDHVVWSLFNTLFMNTCCLGFIAFAYS 80
M KEE EVA+LG P + P STVI+I SETSVPDHVVWSLFNTLF+N CCLGFIAFAYS
Sbjct: 1 MHKEEHEVAVLGAPPSTILPRSTVINIHSETSVPDHVVWSLFNTLFLNWCCLGFIAFAYS 60
Query: 81 VKSRDRKMVGDVTGAQAYASTAKCLNIWALILGIFMTILLIIIPV 125
VKSRDRKMVGDVTGAQAYASTAKCLNIWALILGI MTI I++ V
Sbjct: 61 VKSRDRKMVGDVTGAQAYASTAKCLNIWALILGILMTIGFILLLV 105
>gi|70608168 interferon induced transmembrane protein 5 [Homo
sapiens]
Length = 132
Score = 83.2 bits (204), Expect = 6e-17
Identities = 39/91 (42%), Positives = 57/91 (62%), Gaps = 15/91 (16%)
Query: 31 LGVPHNPAPPMSTVIHIRSETSVPDHVVWSLFNTLFMNTCCLGFIAFAYSVKSRDRKMVG 90
LG PH P DH++WS+F+TL++N CCLGF+A AYS+K+RD+K+VG
Sbjct: 26 LGAPHPPPR---------------DHLIWSVFSTLYLNLCCLGFLALAYSIKARDQKVVG 70
Query: 91 DVTGAQAYASTAKCLNIWALILGIFMTILLI 121
D+ A+ + S AKC NI A + + +LL+
Sbjct: 71 DLEAARRFGSKAKCYNILAAMWTLVPPLLLL 101
>gi|156523246 proline-rich transmembrane protein 2 [Homo sapiens]
Length = 340
Score = 48.5 bits (114), Expect = 2e-06
Identities = 38/128 (29%), Positives = 59/128 (46%), Gaps = 14/128 (10%)
Query: 9 SPVNSGQPPNY-EMLKEEQEVAMLGVPHNPAPPMSTVIHIRSETSVP------------D 55
SP +G PP + L EE + H +P S H S+ + P D
Sbjct: 208 SPPANGAPPRVLQQLVEEDRMRRAHSGHPGSPRGSLSRHPSSQLAGPGVEGGEGTQKPRD 267
Query: 56 HVVWSLFNTLFMNTCCLGFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWALILGIF 115
+++ ++ + F + +AFAY+V SR+ GDV GAQ AK L+I AL+ G+
Sbjct: 268 YIILAILSC-FCPMWPVNIVAFAYAVMSRNSLQQGDVDGAQRLGRVAKLLSIVALVGGVL 326
Query: 116 MTILLIII 123
+ I +I
Sbjct: 327 IIIASCVI 334
>gi|169178462 PREDICTED: similar to NG5 protein [Homo sapiens]
Length = 93
Score = 38.5 bits (88), Expect = 0.002
Identities = 24/76 (31%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 55 DHVVWSLFNTLFMNTCCL--GFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWALIL 112
D+++ S+ TLF CCL G IA YS ++R GD+ A+ + A+ L +++L+
Sbjct: 18 DYMMESVLVTLF---CCLLTGLIAIVYSHEARAALGRGDLAQAEEASRKARSLVLFSLLF 74
Query: 113 GIFMTILLIIIPVLVV 128
G+F++ +I V+ +
Sbjct: 75 GVFVSTSWVIYVVVAL 90
>gi|113421234 PREDICTED: similar to NG5 protein [Homo sapiens]
Length = 288
Score = 38.5 bits (88), Expect = 0.002
Identities = 24/76 (31%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 55 DHVVWSLFNTLFMNTCCL--GFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWALIL 112
D+++ S+ TLF CCL G IA YS ++R GD+ A+ + A+ L +++L+
Sbjct: 213 DYMMESVLVTLF---CCLLTGLIAIVYSHEARAALGRGDLAQAEEASRKARSLVLFSLLF 269
Query: 113 GIFMTILLIIIPVLVV 128
G+F++ +I V+ +
Sbjct: 270 GVFVSTSWVIYVVVAL 285
>gi|113420954 PREDICTED: similar to NG5 protein [Homo sapiens]
Length = 288
Score = 38.5 bits (88), Expect = 0.002
Identities = 24/76 (31%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 55 DHVVWSLFNTLFMNTCCL--GFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWALIL 112
D+++ S+ TLF CCL G IA YS ++R GD+ A+ + A+ L +++L+
Sbjct: 213 DYMMESVLVTLF---CCLLTGLIAIVYSHEARAALGRGDLAQAEEASRKARSLVLFSLLF 269
Query: 113 GIFMTILLIIIPVLVV 128
G+F++ +I V+ +
Sbjct: 270 GVFVSTSWVIYVVVAL 285
>gi|110578657 LOST1 [Homo sapiens]
Length = 177
Score = 31.6 bits (70), Expect = 0.19
Identities = 19/86 (22%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Query: 38 APPMSTVIHIRSETSVPDHVVWSLFNTLFMNTCCLGFIAFAYSVKSRDRKMVGDVTGAQA 97
A ++T + + + + D+++ ++ F L I S+ SR G+V GA+
Sbjct: 86 ASSIATTSYAQDQEAPRDYLILAVV-ACFCPVWPLNLIPLIISIMSRSSMQQGNVDGARR 144
Query: 98 YASTAKCLNIWALILGIFMTILLIII 123
A+ L+I +I+GI + ++ + +
Sbjct: 145 LGRLARLLSITLIIMGIVIIMVAVTV 170
>gi|77681565 NG5 protein [Homo sapiens]
Length = 306
Score = 30.8 bits (68), Expect = 0.32
Identities = 24/98 (24%), Positives = 45/98 (45%), Gaps = 8/98 (8%)
Query: 37 PAPPMSTVIHIRSETSVP-DHVVWSLFNTLFMNTCCL---GFIAFAYSVKSRDRKMVGDV 92
P PP + + P D++ ++ T+ CC G IA +V+ R GD+
Sbjct: 203 PPPPQGPGLALLEPRRPPHDYMPIAVLTTI----CCFWPTGIIAIFKAVQVRTALARGDM 258
Query: 93 TGAQAYASTAKCLNIWALILGIFMTILLIIIPVLVVQA 130
A+ + A+ + +L +GI +L I+ V+++ A
Sbjct: 259 VSAEIASREARNFSFISLAVGIAAMVLCTILTVVIIIA 296
>gi|211904185 hypothetical protein LOC387890 [Homo sapiens]
Length = 109
Score = 30.8 bits (68), Expect = 0.32
Identities = 15/67 (22%), Positives = 32/67 (47%)
Query: 50 ETSVPDHVVWSLFNTLFMNTCCLGFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWA 109
+ +P + +W + F + +A +S+ S + GD GA+ AK + I +
Sbjct: 30 DVPMPKNYLWLTIVSCFCPAYPINIVALVFSIMSLNSYNDGDYEGARRLGRNAKWVAIAS 89
Query: 110 LILGIFM 116
+I+G+ +
Sbjct: 90 IIIGLLI 96
>gi|154707844 transmembrane protein 91 isoform a [Homo sapiens]
Length = 172
Score = 29.6 bits (65), Expect = 0.72
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Query: 55 DHVVWSLFNTLFMNTCC---LGFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWALI 111
DH+ ++F+ L CC +G AF + K+ GD+ GA A + A L + A+
Sbjct: 94 DHLGLAVFSML----CCFWPVGIAAFCLAQKTNKAWAKGDIQGAGAASRRAFLLGVLAVG 149
Query: 112 LGI 114
LG+
Sbjct: 150 LGV 152
>gi|39932581 hypothetical protein LOC55051 isoform 2 [Homo sapiens]
Length = 933
Score = 28.9 bits (63), Expect = 1.2
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 5/54 (9%)
Query: 25 EQEVAMLGVPHNPAPPMSTVIHIRSETSVPDHVVW-----SLFNTLFMNTCCLG 73
E + LGVP PP S + E S+ D+ ++ + FN LF C+G
Sbjct: 407 EAFLQFLGVPSGFTPPASCLYLAMDENSIFDNGLYDEKPLTFFNPLFSGASCVG 460
>gi|39932583 hypothetical protein LOC55051 isoform 1 [Homo sapiens]
Length = 1164
Score = 28.9 bits (63), Expect = 1.2
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 5/54 (9%)
Query: 25 EQEVAMLGVPHNPAPPMSTVIHIRSETSVPDHVVW-----SLFNTLFMNTCCLG 73
E + LGVP PP S + E S+ D+ ++ + FN LF C+G
Sbjct: 638 EAFLQFLGVPSGFTPPASCLYLAMDENSIFDNGLYDEKPLTFFNPLFSGASCVG 691
>gi|194018542 hypothetical protein LOC84529 isoform 1 [Homo sapiens]
Length = 281
Score = 28.5 bits (62), Expect = 1.6
Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 35 HNPAPPMSTVIH--IRSETSVPDHVVWSLFNTLFMNTCCLG 73
H PP ++I+ +R + +PD V+ + +N CC G
Sbjct: 111 HEETPPSKSIINSMLRDPSQIPDGVLANQVYQCIVNDCCYG 151
>gi|14210512 hypothetical protein LOC84529 isoform 2 [Homo
sapiens]
Length = 183
Score = 28.5 bits (62), Expect = 1.6
Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 35 HNPAPPMSTVIH--IRSETSVPDHVVWSLFNTLFMNTCCLG 73
H PP ++I+ +R + +PD V+ + +N CC G
Sbjct: 13 HEETPPSKSIINSMLRDPSQIPDGVLANQVYQCIVNDCCYG 53
>gi|18426913 drebrin 1 isoform b [Homo sapiens]
Length = 651
Score = 27.7 bits (60), Expect = 2.7
Identities = 16/46 (34%), Positives = 20/46 (43%)
Query: 10 PVNSGQPPNYEMLKEEQEVAMLGVPHNPAPPMSTVIHIRSETSVPD 55
P G P M E E A+L P PA +T IH ++T D
Sbjct: 413 PRGPGSPAEDLMFMESAEQAVLAAPVEPATADATEIHDAADTIETD 458
>gi|18426915 drebrin 1 isoform a [Homo sapiens]
Length = 649
Score = 27.7 bits (60), Expect = 2.7
Identities = 16/46 (34%), Positives = 20/46 (43%)
Query: 10 PVNSGQPPNYEMLKEEQEVAMLGVPHNPAPPMSTVIHIRSETSVPD 55
P G P M E E A+L P PA +T IH ++T D
Sbjct: 411 PRGPGSPAEDLMFMESAEQAVLAAPVEPATADATEIHDAADTIETD 456
>gi|24307933 transcription factor EB [Homo sapiens]
Length = 476
Score = 27.7 bits (60), Expect = 2.7
Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Query: 18 NYEMLKEEQEVAMLGVPHNPAPPMSTVIHIRSETSVPDHVV 58
+Y +++Q+ LG P P P ++T +H +S VP V+
Sbjct: 32 HYMQQQQQQQQQQLGGP--PTPAINTPVHFQSPPPVPGEVL 70
>gi|155969714 nuclear protein, ataxia-telangiectasia locus [Homo
sapiens]
Length = 1427
Score = 27.3 bits (59), Expect = 3.6
Identities = 12/47 (25%), Positives = 27/47 (57%)
Query: 7 TFSPVNSGQPPNYEMLKEEQEVAMLGVPHNPAPPMSTVIHIRSETSV 53
T +PV + Q PN++M+ + +E + P+ +P +S+ + S ++
Sbjct: 1069 TTAPVANTQGPNHKMVSQNKERNAVSFPNLDSPNVSSTLKPPSNNAI 1115
>gi|148225857 G protein-coupled receptor 34 [Homo sapiens]
Length = 381
Score = 26.9 bits (58), Expect = 4.7
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 57 VVWSLFN-TLFMNTCCLGFIAFAYSVK-SRDRKMVGDVTGAQAYASTAKCLNIWALILGI 114
VV +LF ++++ LGFI+ +K +R + +T Q S C +W L LG
Sbjct: 129 VVGTLFYMNMYISIILLGFISLDRYIKINRSIQQRKAITTKQ---SIYVCCIVWMLALGG 185
Query: 115 FMTILLIII 123
F+T++++ +
Sbjct: 186 FLTMIILTL 194
>gi|4885319 G protein-coupled receptor 34 [Homo sapiens]
Length = 381
Score = 26.9 bits (58), Expect = 4.7
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 57 VVWSLFN-TLFMNTCCLGFIAFAYSVK-SRDRKMVGDVTGAQAYASTAKCLNIWALILGI 114
VV +LF ++++ LGFI+ +K +R + +T Q S C +W L LG
Sbjct: 129 VVGTLFYMNMYISIILLGFISLDRYIKINRSIQQRKAITTKQ---SIYVCCIVWMLALGG 185
Query: 115 FMTILLIII 123
F+T++++ +
Sbjct: 186 FLTMIILTL 194
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.325 0.136 0.417
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,000,184
Number of Sequences: 37866
Number of extensions: 195917
Number of successful extensions: 820
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 806
Number of HSP's gapped (non-prelim): 22
length of query: 132
length of database: 18,247,518
effective HSP length: 91
effective length of query: 41
effective length of database: 14,801,712
effective search space: 606870192
effective search space used: 606870192
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.