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Search of human proteins with 148886718
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|148886718 zinc finger, CCHC domain containing 4 [Homo
sapiens]
(513 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|148886718 zinc finger, CCHC domain containing 4 [Homo sapiens] 1088 0.0
gi|239753965 PREDICTED: zinc finger, DHHC-type containing 11B [H... 39 0.015
gi|239742476 PREDICTED: zinc finger, DHHC-type containing 11B is... 39 0.015
gi|13376150 zinc finger, DHHC-type containing 11 [Homo sapiens] 39 0.015
gi|30425538 zinc finger, DHHC-type containing 21 [Homo sapiens] 38 0.019
gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo s... 37 0.043
gi|14149987 WD repeat domain 24 [Homo sapiens] 37 0.043
gi|51972220 keratin associated protein 5-2 [Homo sapiens] 37 0.056
gi|24307963 zinc finger, DHHC-type containing 1 [Homo sapiens] 36 0.073
gi|108773804 Fraser syndrome 1 [Homo sapiens] 35 0.16
gi|196259805 zinc finger, CCHC domain containing 9 [Homo sapiens] 35 0.16
gi|196259803 zinc finger, CCHC domain containing 9 [Homo sapiens] 35 0.16
gi|14150027 zinc finger, CCHC domain containing 9 [Homo sapiens] 35 0.16
gi|31324577 molecule interacting with Rab13 [Homo sapiens] 35 0.16
gi|239755070 PREDICTED: similar to proprotein convertase subtili... 35 0.21
gi|239749596 PREDICTED: hypothetical protein XP_002347099 [Homo ... 35 0.21
gi|239743863 PREDICTED: hypothetical protein XP_002342982 [Homo ... 35 0.21
gi|37594451 Abl-philin 2 isoform 2 [Homo sapiens] 35 0.21
gi|46409316 zinc finger, DHHC-type containing 24 [Homo sapiens] 35 0.21
gi|37594447 Abl-philin 2 isoform 4 [Homo sapiens] 35 0.21
gi|45433499 zinc finger, DHHC-type containing 18 [Homo sapiens] 35 0.21
gi|37594449 Abl-philin 2 isoform 1 [Homo sapiens] 34 0.28
gi|37594455 Abl-philin 2 isoform 1 [Homo sapiens] 34 0.28
gi|206597479 zinc finger, DHHC-type containing 3 isoform 3 [Homo... 34 0.36
gi|206597477 zinc finger, DHHC-type containing 3 isoform 1 [Homo... 34 0.36
gi|7706133 zinc finger, DHHC-type containing 3 isoform 2 [Homo s... 34 0.36
gi|211971095 zygote arrest 1-like [Homo sapiens] 33 0.48
gi|187608732 zinc finger protein 9 isoform 2 [Homo sapiens] 33 0.48
gi|224493964 zinc finger, DHHC-type containing 7 isoform 1 [Homo... 33 0.62
gi|224493956 zinc finger, DHHC-type containing 7 isoform 2 [Homo... 33 0.62
>gi|148886718 zinc finger, CCHC domain containing 4 [Homo sapiens]
Length = 513
Score = 1088 bits (2813), Expect = 0.0
Identities = 513/513 (100%), Positives = 513/513 (100%)
Query: 1 MAASRNGFEAVEAEGSAGCRGSSGMEVVLPLDPAVPAPLCPHGPTLLFVKVTQGKEETRR 60
MAASRNGFEAVEAEGSAGCRGSSGMEVVLPLDPAVPAPLCPHGPTLLFVKVTQGKEETRR
Sbjct: 1 MAASRNGFEAVEAEGSAGCRGSSGMEVVLPLDPAVPAPLCPHGPTLLFVKVTQGKEETRR 60
Query: 61 FYACSACRDRKDCNFFQWEDEKLSGARLAAREAHNRRCQPPLSRTQCVERYLKFIELPLT 120
FYACSACRDRKDCNFFQWEDEKLSGARLAAREAHNRRCQPPLSRTQCVERYLKFIELPLT
Sbjct: 61 FYACSACRDRKDCNFFQWEDEKLSGARLAAREAHNRRCQPPLSRTQCVERYLKFIELPLT 120
Query: 121 QRKFCQTCQQLLLPDDWGQHSEHQVLGNVSITQLRRPSQLLYPLENKKTNAQYLFADRSC 180
QRKFCQTCQQLLLPDDWGQHSEHQVLGNVSITQLRRPSQLLYPLENKKTNAQYLFADRSC
Sbjct: 121 QRKFCQTCQQLLLPDDWGQHSEHQVLGNVSITQLRRPSQLLYPLENKKTNAQYLFADRSC 180
Query: 181 QFLVDLLSALGFRRVLCVGTPRLHELIKLTASGDKKSNIKSLLLDIDFRYSQFYMEDSFC 240
QFLVDLLSALGFRRVLCVGTPRLHELIKLTASGDKKSNIKSLLLDIDFRYSQFYMEDSFC
Sbjct: 181 QFLVDLLSALGFRRVLCVGTPRLHELIKLTASGDKKSNIKSLLLDIDFRYSQFYMEDSFC 240
Query: 241 HYNMFNHHFFDGKTALEVCRAFLQEDKGEGIIMVTDPPFGGLVEPLAITFKKLIAMWKEG 300
HYNMFNHHFFDGKTALEVCRAFLQEDKGEGIIMVTDPPFGGLVEPLAITFKKLIAMWKEG
Sbjct: 241 HYNMFNHHFFDGKTALEVCRAFLQEDKGEGIIMVTDPPFGGLVEPLAITFKKLIAMWKEG 300
Query: 301 QSQDDSHKELPIFWIFPYFFESRICQFFPSFQMLDYQVDYDNHALYKHGKTGRKQSPVRI 360
QSQDDSHKELPIFWIFPYFFESRICQFFPSFQMLDYQVDYDNHALYKHGKTGRKQSPVRI
Sbjct: 301 QSQDDSHKELPIFWIFPYFFESRICQFFPSFQMLDYQVDYDNHALYKHGKTGRKQSPVRI 360
Query: 361 FTNIPPNKIILPTEEGYRFCSPCQRYVSLENQHCELCNSCTSKDGRKWNHCFLCKKCVKP 420
FTNIPPNKIILPTEEGYRFCSPCQRYVSLENQHCELCNSCTSKDGRKWNHCFLCKKCVKP
Sbjct: 361 FTNIPPNKIILPTEEGYRFCSPCQRYVSLENQHCELCNSCTSKDGRKWNHCFLCKKCVKP 420
Query: 421 SWIHCSICNHCAVPDHSCEGPKHGCFICGELDHKRSTCPNIATSKRANKAVRKQKQRKSN 480
SWIHCSICNHCAVPDHSCEGPKHGCFICGELDHKRSTCPNIATSKRANKAVRKQKQRKSN
Sbjct: 421 SWIHCSICNHCAVPDHSCEGPKHGCFICGELDHKRSTCPNIATSKRANKAVRKQKQRKSN 480
Query: 481 KMKMETTKGQSMNHTSATRRKKRRERAHQYLGS 513
KMKMETTKGQSMNHTSATRRKKRRERAHQYLGS
Sbjct: 481 KMKMETTKGQSMNHTSATRRKKRRERAHQYLGS 513
>gi|239753965 PREDICTED: zinc finger, DHHC-type containing 11B [Homo
sapiens]
Length = 573
Score = 38.5 bits (88), Expect = 0.015
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Query: 389 LENQHCELCNSCTSKDGRKWNHCFLCKKCVKPSWIHCSICNHC 431
++NQ C LC +K K HC C KCV HC N+C
Sbjct: 335 IQNQFCHLCKVTVNK---KTKHCISCNKCVSGFDHHCKWINNC 374
Score = 30.4 bits (67), Expect = 4.0
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
Query: 378 RFCSPCQRYVSLENQHCELCNSCTSKDGRKWNHCFLCKKCV 418
+FC C+ V+ + +HC CN C S +HC CV
Sbjct: 338 QFCHLCKVTVNKKTKHCISCNKCVSGFD---HHCKWINNCV 375
>gi|239742476 PREDICTED: zinc finger, DHHC-type containing 11B
isoform 1 [Homo sapiens]
Length = 360
Score = 38.5 bits (88), Expect = 0.015
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Query: 389 LENQHCELCNSCTSKDGRKWNHCFLCKKCVKPSWIHCSICNHC 431
++NQ C LC +K K HC C KCV HC N+C
Sbjct: 122 IQNQFCHLCKVTVNK---KTKHCISCNKCVSGFDHHCKWINNC 161
Score = 30.4 bits (67), Expect = 4.0
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
Query: 378 RFCSPCQRYVSLENQHCELCNSCTSKDGRKWNHCFLCKKCV 418
+FC C+ V+ + +HC CN C S +HC CV
Sbjct: 125 QFCHLCKVTVNKKTKHCISCNKCVSGFD---HHCKWINNCV 162
>gi|13376150 zinc finger, DHHC-type containing 11 [Homo sapiens]
Length = 412
Score = 38.5 bits (88), Expect = 0.015
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Query: 389 LENQHCELCNSCTSKDGRKWNHCFLCKKCVKPSWIHCSICNHC 431
++NQ C LC +K K HC C KCV HC N+C
Sbjct: 122 IQNQFCHLCKVTVNK---KTKHCISCNKCVSGFDHHCKWINNC 161
Score = 30.4 bits (67), Expect = 4.0
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
Query: 378 RFCSPCQRYVSLENQHCELCNSCTSKDGRKWNHCFLCKKCV 418
+FC C+ V+ + +HC CN C S +HC CV
Sbjct: 125 QFCHLCKVTVNKKTKHCISCNKCVSGFD---HHCKWINNCV 162
>gi|30425538 zinc finger, DHHC-type containing 21 [Homo sapiens]
Length = 265
Score = 38.1 bits (87), Expect = 0.019
Identities = 16/47 (34%), Positives = 23/47 (48%)
Query: 390 ENQHCELCNSCTSKDGRKWNHCFLCKKCVKPSWIHCSICNHCAVPDH 436
E + ELCN C ++ +HC C CV+ HC N+C D+
Sbjct: 85 EREFWELCNKCNLMRPKRSHHCSRCGHCVRRMDHHCPWINNCVGEDN 131
>gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo
sapiens]
Length = 4911
Score = 37.0 bits (84), Expect = 0.043
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 6/68 (8%)
Query: 374 EEGYR-FC-SPCQRYVSLEN---QHCELCNSCTSKDGRKWNH-CFLCKKCVKPSWIHCSI 427
++GY FC P + V ++C +C C ++ +W+H C +C C + C
Sbjct: 410 DKGYHTFCLQPVMKSVPTNGWKCKNCRICIECGTRSSSQWHHNCLICDNCYQQQDNLCPF 469
Query: 428 CNHCAVPD 435
C C P+
Sbjct: 470 CGKCYHPE 477
>gi|14149987 WD repeat domain 24 [Homo sapiens]
Length = 790
Score = 37.0 bits (84), Expect = 0.043
Identities = 23/75 (30%), Positives = 31/75 (41%), Gaps = 10/75 (13%)
Query: 380 CSPCQRYVSLENQHCELCNSCTSKDGRKWNHCFLCKKCVKPSWIHCSICNHCAVPDHS-- 437
CS C+R +S C+ C+ C S C +C VK ++ C C+H H
Sbjct: 719 CSHCKRPMSSRGWVCDRCHRCASM-------CAVCHHVVKGLFVWCQGCSHGGHLQHIMK 771
Query: 438 -CEGPKHGCFICGEL 451
EG H CG L
Sbjct: 772 WLEGSSHCPAGCGHL 786
>gi|51972220 keratin associated protein 5-2 [Homo sapiens]
Length = 177
Score = 36.6 bits (83), Expect = 0.056
Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 8/61 (13%)
Query: 397 CNSCTSKDGRKWNHCFLCKKCVKP--SWI---HCSICNHCAVPDH---SCEGPKHGCFIC 448
C C+S G + C++ C KP SW+ C+ C C SC G K GC C
Sbjct: 42 CGGCSSSCGGCGSRCYVPVCCCKPVCSWVPACSCTSCGSCGGSKGGCGSCGGSKGGCGSC 101
Query: 449 G 449
G
Sbjct: 102 G 102
>gi|24307963 zinc finger, DHHC-type containing 1 [Homo sapiens]
Length = 485
Score = 36.2 bits (82), Expect = 0.073
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Query: 389 LENQHCELCNSCTSKDGRKWNHCFLCKKCVKPSWIHCSICNHC 431
+E+ HC LCN S + HC C KCV HC N+C
Sbjct: 131 IEDLHCNLCNVDVSARSK---HCSACNKCVCGFDHHCKWLNNC 170
>gi|108773804 Fraser syndrome 1 [Homo sapiens]
Length = 4011
Score = 35.0 bits (79), Expect = 0.16
Identities = 26/96 (27%), Positives = 40/96 (41%), Gaps = 16/96 (16%)
Query: 366 PNKIILPTEEGYRFCSPCQRYVSLENQHCELCN-SCTSKDGRKWNHCFLC---------- 414
PNK++L E Y C+P Q Y+ C+ C+ SC++ G C C
Sbjct: 928 PNKVLLFGECQYESCAP-QYYLDFSTNTCKECDWSCSACSGPLKTDCLQCMDGYVLQDGA 986
Query: 415 --KKCVKPSWIHCSICNHCAVPDHSCEGPKHGCFIC 448
++C+ + +C C C+GP H C C
Sbjct: 987 CVEQCLSSFYQDSGLCK-CDSYCLQCQGP-HECTRC 1020
>gi|196259805 zinc finger, CCHC domain containing 9 [Homo sapiens]
Length = 271
Score = 35.0 bits (79), Expect = 0.16
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 18/93 (19%)
Query: 388 SLENQHCE--LCNSCTSKDGRKWNHCFLCKKCVKPS-----WIHCSICNHCAVPDHSC-E 439
+LENQ +C C S + + CK V P+ + C +C SC +
Sbjct: 146 ALENQDMGTGICYRCGSTE----HEITKCKAKVDPALGEFPFAKCFVCGEMGHLSRSCPD 201
Query: 440 GPKH------GCFICGELDHKRSTCPNIATSKR 466
PK GC +CG ++H + CP S+R
Sbjct: 202 NPKGLYADGGGCKLCGSVEHLKKDCPESQNSER 234
Score = 30.4 bits (67), Expect = 4.0
Identities = 15/59 (25%), Positives = 23/59 (38%), Gaps = 12/59 (20%)
Query: 414 CKKCVKPSWIHCSICNHCAVPDHSC------------EGPKHGCFICGELDHKRSTCPN 460
C ++ + IC C +H E P CF+CGE+ H +CP+
Sbjct: 143 CPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAKCFVCGEMGHLSRSCPD 201
>gi|196259803 zinc finger, CCHC domain containing 9 [Homo sapiens]
Length = 271
Score = 35.0 bits (79), Expect = 0.16
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 18/93 (19%)
Query: 388 SLENQHCE--LCNSCTSKDGRKWNHCFLCKKCVKPS-----WIHCSICNHCAVPDHSC-E 439
+LENQ +C C S + + CK V P+ + C +C SC +
Sbjct: 146 ALENQDMGTGICYRCGSTE----HEITKCKAKVDPALGEFPFAKCFVCGEMGHLSRSCPD 201
Query: 440 GPKH------GCFICGELDHKRSTCPNIATSKR 466
PK GC +CG ++H + CP S+R
Sbjct: 202 NPKGLYADGGGCKLCGSVEHLKKDCPESQNSER 234
Score = 30.4 bits (67), Expect = 4.0
Identities = 15/59 (25%), Positives = 23/59 (38%), Gaps = 12/59 (20%)
Query: 414 CKKCVKPSWIHCSICNHCAVPDHSC------------EGPKHGCFICGELDHKRSTCPN 460
C ++ + IC C +H E P CF+CGE+ H +CP+
Sbjct: 143 CPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAKCFVCGEMGHLSRSCPD 201
>gi|14150027 zinc finger, CCHC domain containing 9 [Homo sapiens]
Length = 271
Score = 35.0 bits (79), Expect = 0.16
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 18/93 (19%)
Query: 388 SLENQHCE--LCNSCTSKDGRKWNHCFLCKKCVKPS-----WIHCSICNHCAVPDHSC-E 439
+LENQ +C C S + + CK V P+ + C +C SC +
Sbjct: 146 ALENQDMGTGICYRCGSTE----HEITKCKAKVDPALGEFPFAKCFVCGEMGHLSRSCPD 201
Query: 440 GPKH------GCFICGELDHKRSTCPNIATSKR 466
PK GC +CG ++H + CP S+R
Sbjct: 202 NPKGLYADGGGCKLCGSVEHLKKDCPESQNSER 234
Score = 30.4 bits (67), Expect = 4.0
Identities = 15/59 (25%), Positives = 23/59 (38%), Gaps = 12/59 (20%)
Query: 414 CKKCVKPSWIHCSICNHCAVPDHSC------------EGPKHGCFICGELDHKRSTCPN 460
C ++ + IC C +H E P CF+CGE+ H +CP+
Sbjct: 143 CPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAKCFVCGEMGHLSRSCPD 201
>gi|31324577 molecule interacting with Rab13 [Homo sapiens]
Length = 863
Score = 35.0 bits (79), Expect = 0.16
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 20/72 (27%)
Query: 380 CSPCQRYVSLENQHCELCNSCTSKDGRKWN-HCFLCKKCVKPSWIHCSICNHCAVPDHSC 438
C+ CQ++V L ++ DGR ++ HCF C++C + +P
Sbjct: 164 CAACQQHVHLVQRYLA--------DGRLYHRHCFRCRRC-----------SSTLLPGAYE 204
Query: 439 EGPKHGCFICGE 450
GP+ G F+C E
Sbjct: 205 NGPEEGTFVCAE 216
>gi|239755070 PREDICTED: similar to proprotein convertase
subtilisin/kexin type 5 [Homo sapiens]
Length = 853
Score = 34.7 bits (78), Expect = 0.21
Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 6/58 (10%)
Query: 395 ELCNSCTSKDGRKW----NHCFLCKKCVKPSWIHCSICNHCAVPDHSCEGPKHGCFIC 448
+LC C + G C+ KC + S+ IC C+ P +CEG C C
Sbjct: 235 DLCKKCQMQPGHPLFLHEGRCY--SKCPEGSYAEDGICERCSSPCRTCEGNATNCHSC 290
Score = 32.7 bits (73), Expect = 0.81
Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 27/86 (31%)
Query: 384 QRYVSLEN--QHC-ELCNSCTSKDGRKWNHCFLCKKCVKPSWIHCSIC-----------N 429
+R+V++E +HC E+C C H CK+C+ ++H +C +
Sbjct: 307 ERHVAVEGVCKHCPEMCQDCI--------HEKTCKECMPEFFLHDDMCHQSCPRGFYADS 358
Query: 430 HCAVPDH----SCEGPK-HGCFICGE 450
H VP H C GPK C +C E
Sbjct: 359 HHCVPCHKDCLECSGPKADDCELCLE 384
>gi|239749596 PREDICTED: hypothetical protein XP_002347099 [Homo
sapiens]
Length = 853
Score = 34.7 bits (78), Expect = 0.21
Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 6/58 (10%)
Query: 395 ELCNSCTSKDGRKW----NHCFLCKKCVKPSWIHCSICNHCAVPDHSCEGPKHGCFIC 448
+LC C + G C+ KC + S+ IC C+ P +CEG C C
Sbjct: 235 DLCKKCQMQPGHPLFLHEGRCY--SKCPEGSYAEDGICERCSSPCRTCEGNATNCHSC 290
>gi|239743863 PREDICTED: hypothetical protein XP_002342982 [Homo
sapiens]
Length = 853
Score = 34.7 bits (78), Expect = 0.21
Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 6/58 (10%)
Query: 395 ELCNSCTSKDGRKW----NHCFLCKKCVKPSWIHCSICNHCAVPDHSCEGPKHGCFIC 448
+LC C + G C+ KC + S+ IC C+ P +CEG C C
Sbjct: 235 DLCKKCQMQPGHPLFLHEGRCY--SKCPEGSYAEDGICERCSSPCRTCEGNATNCHSC 290
>gi|37594451 Abl-philin 2 isoform 2 [Homo sapiens]
Length = 361
Score = 34.7 bits (78), Expect = 0.21
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 4/30 (13%)
Query: 413 LCKKCVKPSWI---HCSICNHCAVP-DHSC 438
+CKKC+ P HCSICN C + DH C
Sbjct: 156 ICKKCIYPKPARTHHCSICNRCVLKMDHHC 185
Score = 32.0 bits (71), Expect = 1.4
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 396 LCNSCTSKDGRKWNHCFLCKKCVKPSWIHCSICNHC 431
+C C + +HC +C +CV HC N+C
Sbjct: 156 ICKKCIYPKPARTHHCSICNRCVLKMDHHCPWLNNC 191
Score = 30.0 bits (66), Expect = 5.3
Identities = 18/61 (29%), Positives = 23/61 (37%), Gaps = 6/61 (9%)
Query: 368 KIILPTEEGYRFCSPCQRYVSLENQHCELCNSCTSKDGRKW--NHCFL----CKKCVKPS 421
K I P CS C R V + HC N+C ++ + CF C C S
Sbjct: 159 KCIYPKPARTHHCSICNRCVLKMDHHCPWLNNCVGHYNHRYFFSFCFFMTLGCVYCSYGS 218
Query: 422 W 422
W
Sbjct: 219 W 219
>gi|46409316 zinc finger, DHHC-type containing 24 [Homo sapiens]
Length = 284
Score = 34.7 bits (78), Expect = 0.21
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 405 GRKWNHCFLCKKCVKPSWIHCSICNHCAV-PDHSC 438
G+ W +C+ C+ V P HCS C C + DH C
Sbjct: 90 GQGWAYCYQCQSQVPPRSGHCSACRVCILRRDHHC 124
Score = 34.7 bits (78), Expect = 0.21
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Query: 375 EGYRFCSPCQRYVSLENQHCELCNSCTSKDGRKWNHCFLCKKCV 418
+G+ +C CQ V + HC C C R+ +HC L +CV
Sbjct: 91 QGWAYCYQCQSQVPPRSGHCSACRVCIL---RRDHHCRLLGRCV 131
>gi|37594447 Abl-philin 2 isoform 4 [Homo sapiens]
Length = 296
Score = 34.7 bits (78), Expect = 0.21
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 4/30 (13%)
Query: 413 LCKKCVKPSWI---HCSICNHCAVP-DHSC 438
+CKKC+ P HCSICN C + DH C
Sbjct: 91 ICKKCIYPKPARTHHCSICNRCVLKMDHHC 120
Score = 32.0 bits (71), Expect = 1.4
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 396 LCNSCTSKDGRKWNHCFLCKKCVKPSWIHCSICNHC 431
+C C + +HC +C +CV HC N+C
Sbjct: 91 ICKKCIYPKPARTHHCSICNRCVLKMDHHCPWLNNC 126
Score = 30.0 bits (66), Expect = 5.3
Identities = 18/61 (29%), Positives = 23/61 (37%), Gaps = 6/61 (9%)
Query: 368 KIILPTEEGYRFCSPCQRYVSLENQHCELCNSCTSKDGRKW--NHCFL----CKKCVKPS 421
K I P CS C R V + HC N+C ++ + CF C C S
Sbjct: 94 KCIYPKPARTHHCSICNRCVLKMDHHCPWLNNCVGHYNHRYFFSFCFFMTLGCVYCSYGS 153
Query: 422 W 422
W
Sbjct: 154 W 154
>gi|45433499 zinc finger, DHHC-type containing 18 [Homo sapiens]
Length = 388
Score = 34.7 bits (78), Expect = 0.21
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 407 KWNHCFLCKKCVKPSWIHCSICNHCAVP-DHSC 438
K +CF CK P HCS+C++C DH C
Sbjct: 190 KLKYCFTCKMFRPPRTSHCSVCDNCVERFDHHC 222
>gi|37594449 Abl-philin 2 isoform 1 [Homo sapiens]
Length = 377
Score = 34.3 bits (77), Expect = 0.28
Identities = 29/124 (23%), Positives = 43/124 (34%), Gaps = 20/124 (16%)
Query: 396 LCNSCTSKDGRKWNHCFLCKKCVKPSWIHCSICNHCAVPDHS------CEGPKHGCFIC- 448
+C C + +HC +C +CV HC N+C + C GC C
Sbjct: 156 ICKKCIYPKPARTHHCSICNRCVLKMDHHCPWLNNCVGHYNHRYFFSFCFFMTLGCVYCS 215
Query: 449 -GELDHKRSTCPNIATSKRANKAVRKQKQRKSNKMKMETTKGQSMNHTSATRRKKRRERA 507
G D + A A+ K KQ N K++ Q+ + T R
Sbjct: 216 YGSWD----------LFREAYAAIEKMKQLDKN--KLQAVANQTYHQTPPPTFSFRERMT 263
Query: 508 HQYL 511
H+ L
Sbjct: 264 HKSL 267
Score = 30.0 bits (66), Expect = 5.3
Identities = 18/61 (29%), Positives = 23/61 (37%), Gaps = 6/61 (9%)
Query: 368 KIILPTEEGYRFCSPCQRYVSLENQHCELCNSCTSKDGRKW--NHCFL----CKKCVKPS 421
K I P CS C R V + HC N+C ++ + CF C C S
Sbjct: 159 KCIYPKPARTHHCSICNRCVLKMDHHCPWLNNCVGHYNHRYFFSFCFFMTLGCVYCSYGS 218
Query: 422 W 422
W
Sbjct: 219 W 219
>gi|37594455 Abl-philin 2 isoform 1 [Homo sapiens]
Length = 377
Score = 34.3 bits (77), Expect = 0.28
Identities = 29/124 (23%), Positives = 43/124 (34%), Gaps = 20/124 (16%)
Query: 396 LCNSCTSKDGRKWNHCFLCKKCVKPSWIHCSICNHCAVPDHS------CEGPKHGCFIC- 448
+C C + +HC +C +CV HC N+C + C GC C
Sbjct: 156 ICKKCIYPKPARTHHCSICNRCVLKMDHHCPWLNNCVGHYNHRYFFSFCFFMTLGCVYCS 215
Query: 449 -GELDHKRSTCPNIATSKRANKAVRKQKQRKSNKMKMETTKGQSMNHTSATRRKKRRERA 507
G D + A A+ K KQ N K++ Q+ + T R
Sbjct: 216 YGSWD----------LFREAYAAIEKMKQLDKN--KLQAVANQTYHQTPPPTFSFRERMT 263
Query: 508 HQYL 511
H+ L
Sbjct: 264 HKSL 267
Score = 30.0 bits (66), Expect = 5.3
Identities = 18/61 (29%), Positives = 23/61 (37%), Gaps = 6/61 (9%)
Query: 368 KIILPTEEGYRFCSPCQRYVSLENQHCELCNSCTSKDGRKW--NHCFL----CKKCVKPS 421
K I P CS C R V + HC N+C ++ + CF C C S
Sbjct: 159 KCIYPKPARTHHCSICNRCVLKMDHHCPWLNNCVGHYNHRYFFSFCFFMTLGCVYCSYGS 218
Query: 422 W 422
W
Sbjct: 219 W 219
>gi|206597479 zinc finger, DHHC-type containing 3 isoform 3 [Homo
sapiens]
Length = 329
Score = 33.9 bits (76), Expect = 0.36
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 397 CNSCTSKDGRKWNHCFLCKKCVKPSWIHCSICNHC 431
C C S + +HC +CK+C++ HC N+C
Sbjct: 129 CPKCCSIKPDRAHHCSVCKRCIRKMDHHCPWVNNC 163
>gi|206597477 zinc finger, DHHC-type containing 3 isoform 1 [Homo
sapiens]
Length = 299
Score = 33.9 bits (76), Expect = 0.36
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 397 CNSCTSKDGRKWNHCFLCKKCVKPSWIHCSICNHC 431
C C S + +HC +CK+C++ HC N+C
Sbjct: 129 CPKCCSIKPDRAHHCSVCKRCIRKMDHHCPWVNNC 163
>gi|7706133 zinc finger, DHHC-type containing 3 isoform 2 [Homo
sapiens]
Length = 327
Score = 33.9 bits (76), Expect = 0.36
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 397 CNSCTSKDGRKWNHCFLCKKCVKPSWIHCSICNHC 431
C C S + +HC +CK+C++ HC N+C
Sbjct: 129 CPKCCSIKPDRAHHCSVCKRCIRKMDHHCPWVNNC 163
>gi|211971095 zygote arrest 1-like [Homo sapiens]
Length = 321
Score = 33.5 bits (75), Expect = 0.48
Identities = 31/108 (28%), Positives = 42/108 (38%), Gaps = 12/108 (11%)
Query: 366 PNKIILPTEEGYRFCSPCQRYVSLENQHCELCNSCTSKDGRKWNHCFLCKKCVKPSWIHC 425
PN L + GY C C+ E+ + C S T+K K C C+K P +
Sbjct: 215 PNFQFLEPKYGYFHCKDCK--TRWESAYV-WCISGTNKVYFK-QLCCKCQKSFNPYRVEA 270
Query: 426 SICNHCAVPDHSCEGPK--------HGCFICGELDHKRSTCPNIATSK 465
C C+ SC K H +CG KR +C NI + K
Sbjct: 271 IQCQTCSKSHCSCPQKKRHIDLRRPHRQELCGRCKDKRFSCGNIYSFK 318
>gi|187608732 zinc finger protein 9 isoform 2 [Homo sapiens]
Length = 178
Score = 33.5 bits (75), Expect = 0.48
Identities = 24/100 (24%), Positives = 38/100 (38%), Gaps = 13/100 (13%)
Query: 373 TEEGYRFCS---PCQRYVSLENQHCELCNSCTSKDGRKWNHC----FLCKKCVKPSWIHC 425
++ G++F S P Y E+ H L C ++ +C + K C +P
Sbjct: 39 SDRGFQFVSSSLPDICYRCGESGH--LAKDCDLQEDEACYNCGRGGHIAKDCKEPKRERE 96
Query: 426 SICNHCAVPDHSCEGPKHG----CFICGELDHKRSTCPNI 461
C +C P H H C+ CGE H + C +
Sbjct: 97 QCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKV 136
>gi|224493964 zinc finger, DHHC-type containing 7 isoform 1 [Homo
sapiens]
Length = 345
Score = 33.1 bits (74), Expect = 0.62
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 397 CNSCTSKDGRKWNHCFLCKKCVKPSWIHCSICNHC 431
C C + +HC +CK+C++ HC N+C
Sbjct: 169 CPKCCCIKPERAHHCSICKRCIRKMDHHCPWVNNC 203
>gi|224493956 zinc finger, DHHC-type containing 7 isoform 2 [Homo
sapiens]
Length = 308
Score = 33.1 bits (74), Expect = 0.62
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 397 CNSCTSKDGRKWNHCFLCKKCVKPSWIHCSICNHC 431
C C + +HC +CK+C++ HC N+C
Sbjct: 132 CPKCCCIKPERAHHCSICKRCIRKMDHHCPWVNNC 166
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.137 0.442
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,744,485
Number of Sequences: 37866
Number of extensions: 1053999
Number of successful extensions: 4351
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 67
Number of HSP's that attempted gapping in prelim test: 4121
Number of HSP's gapped (non-prelim): 265
length of query: 513
length of database: 18,247,518
effective HSP length: 107
effective length of query: 406
effective length of database: 14,195,856
effective search space: 5763517536
effective search space used: 5763517536
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.