Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ZDHHC21 Sequence: fasta or formatted (265aa) NCBI GI: 30425538
Description:

zinc finger, DHHC-type containing 21

Referenced in:

Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.6          7           2
 C cysteine            5.7         15           2
 D aspartate           2.6          7           1
 E glutamate           4.5         12           2
 F phenylalanine       7.5         20           1
 G glycine             5.7         15           1
 H histidine           5.7         15           2
 I isoleucine          9.4         25           3
 K lysine              3.4          9           2
 L leucine            10.6         28           2
 M methionine          3.4          9           1
 N asparagine          3.8         10           2
 P proline             6.0         16           1
 Q glutamine           2.3          6           2
 R arginine            6.8         18           2
 S serine              3.4          9           1
 T threonine           4.2         11           2
 V valine              5.7         15           2
 W tryptophan          3.0          8           1
 Y tyrosine            3.8         10           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger, DHHC-type containing 21 
ZDHHC3                0.183   zinc finger, DHHC-type containing 3 isoform 3 [Homo...
ZDHHC3                0.176   zinc finger, DHHC-type containing 3 isoform 1 [Homo...
ZDHHC3                0.160   zinc finger, DHHC-type containing 3 isoform 2 
ZDHHC7                0.156   zinc finger, DHHC-type containing 7 isoform 2 [Homo...
ZDHHC7                0.133   zinc finger, DHHC-type containing 7 isoform 1 [Homo...
ZDHHC9                0.119   zinc finger, DHHC domain containing 9 
ZDHHC9                0.119   zinc finger, DHHC domain containing 9 
ZDHHC15               0.110   zinc finger, DHHC-type containing 15 isoform 2 [Hom...
ZDHHC15               0.110   zinc finger, DHHC-type containing 15 isoform 1 [Homo...
ZDHHC16               0.106   Abl-philin 2 isoform 1 
ZDHHC16               0.106   Abl-philin 2 isoform 2 
ZDHHC16               0.106   Abl-philin 2 isoform 1 
ZDHHC6                0.103   zinc finger, DHHC-type containing 6 
ZDHHC16               0.103   Abl-philin 2 isoform 4 
ZDHHC20               0.103   zinc finger, DHHC-type containing 20 
ZDHHC14               0.099   zinc finger, DHHC-type containing 14 isoform 1 [Homo...
ZDHHC14               0.099   zinc finger, DHHC-type containing 14 isoform 2 [Homo...
ZDHHC2                0.099   zinc finger, DHHC-type containing 2 
ZDHHC23               0.099   zinc finger, DHHC domain containing 23 
ZDHHC18               0.097   zinc finger, DHHC-type containing 18 
ZDHHC12               0.090   zinc finger, DHHC domain containing 12 
ZDHHC17               0.085   huntingtin interacting protein 14 
ZDHHC5                0.083   zinc finger, DHHC domain containing 5 
ZDHHC8                0.081   zinc finger, DHHC domain containing 8 
ZDHHC1                0.081   zinc finger, DHHC-type containing 1 
ZDHHC19               0.081   zinc finger, DHHC domain containing 19 
ZDHHC11B              0.076   PREDICTED: zinc finger, DHHC-type containing 11B [H...
ZDHHC11B              0.076   PREDICTED: zinc finger, DHHC-type containing 11B is...
ZDHHC11               0.076   zinc finger, DHHC-type containing 11 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press