Guide to the Human Genome
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Search of human proteins with 148727286

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|148727286 acyl-CoA thioesterase 2 [Homo sapiens]
         (483 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|148727286 acyl-CoA thioesterase 2 [Homo sapiens]                   986   0.0  
gi|81230485 acyl-CoA thioesterase 1 [Homo sapiens]                    858   0.0  
gi|187761341 acyl-CoA thioesterase 4 [Homo sapiens]                   621   e-178
gi|189083866 bile acid Coenzyme A: amino acid N-acyltransferase ...   334   9e-92
gi|4502351 bile acid Coenzyme A: amino acid N-acyltransferase [H...   334   9e-92
gi|81230487 acyl-CoA thioesterase 6 [Homo sapiens]                    264   2e-70
gi|169164035 PREDICTED: hypothetical protein [Homo sapiens]            33   0.44 
gi|169163250 PREDICTED: hypothetical protein [Homo sapiens]            33   0.44 
gi|7662310 FERM, RhoGEF and pleckstrin domain protein 2 [Homo sa...    32   1.3  
gi|115583670 T-cell lymphoma invasion and metastasis 1 [Homo sap...    32   1.7  
gi|18093112 ABT1-associated protein [Homo sapiens]                     32   1.7  
gi|118601070 hypothetical protein LOC158724 [Homo sapiens]             30   3.7  
gi|215599424 glutamic pyruvate transaminase 2 isoform 2 [Homo sa...    30   3.7  
gi|19263340 glutamic pyruvate transaminase 2 isoform 1 [Homo sap...    30   3.7  
gi|169171852 PREDICTED: similar to vacuolar protein sorting 35 [...    30   6.4  
gi|223005950 SH3KBP1 binding protein 1 [Homo sapiens]                  29   8.3  

>gi|148727286 acyl-CoA thioesterase 2 [Homo sapiens]
          Length = 483

 Score =  986 bits (2550), Expect = 0.0
 Identities = 483/483 (100%), Positives = 483/483 (100%)

Query: 1   MSNKLLSPHPHSVVLRSEFKMASSPAVLRASRLYQWSLKSSAQFLGSPQLRQVGQIIRVP 60
           MSNKLLSPHPHSVVLRSEFKMASSPAVLRASRLYQWSLKSSAQFLGSPQLRQVGQIIRVP
Sbjct: 1   MSNKLLSPHPHSVVLRSEFKMASSPAVLRASRLYQWSLKSSAQFLGSPQLRQVGQIIRVP 60

Query: 61  ARMAATLILEPAGRCCWDEPVRIAVRGLAPEQPVTLRASLRDEKGALFQAHARYRADTLG 120
           ARMAATLILEPAGRCCWDEPVRIAVRGLAPEQPVTLRASLRDEKGALFQAHARYRADTLG
Sbjct: 61  ARMAATLILEPAGRCCWDEPVRIAVRGLAPEQPVTLRASLRDEKGALFQAHARYRADTLG 120

Query: 121 ELDLERAPALGGSFAGLEPMGLLWALEPEKPLVRLVKRDVRTPLAVELEVLDGHDPDPGR 180
           ELDLERAPALGGSFAGLEPMGLLWALEPEKPLVRLVKRDVRTPLAVELEVLDGHDPDPGR
Sbjct: 121 ELDLERAPALGGSFAGLEPMGLLWALEPEKPLVRLVKRDVRTPLAVELEVLDGHDPDPGR 180

Query: 181 LLCQTRHERYFLPPGVRREPVRVGRVRGTLFLPPEPGPFPGIVDMFGTGGGLLEYRASLL 240
           LLCQTRHERYFLPPGVRREPVRVGRVRGTLFLPPEPGPFPGIVDMFGTGGGLLEYRASLL
Sbjct: 181 LLCQTRHERYFLPPGVRREPVRVGRVRGTLFLPPEPGPFPGIVDMFGTGGGLLEYRASLL 240

Query: 241 AGKGFAVMALAYYNYEDLPKTMETLHLEYFEEAMNYLLSHPEVKGPGVGLLGISKGGELC 300
           AGKGFAVMALAYYNYEDLPKTMETLHLEYFEEAMNYLLSHPEVKGPGVGLLGISKGGELC
Sbjct: 241 AGKGFAVMALAYYNYEDLPKTMETLHLEYFEEAMNYLLSHPEVKGPGVGLLGISKGGELC 300

Query: 301 LSMASFLKGITAAVVINGSVANVGGTLHYKGETLPPVGVNRNRIKVTKDGYADIVDVLNS 360
           LSMASFLKGITAAVVINGSVANVGGTLHYKGETLPPVGVNRNRIKVTKDGYADIVDVLNS
Sbjct: 301 LSMASFLKGITAAVVINGSVANVGGTLHYKGETLPPVGVNRNRIKVTKDGYADIVDVLNS 360

Query: 361 PLEGPDQKSFIPVERAESTFLFLVGQDDHNWKSEFYANEACKRLQAHGRRKPQIICYPET 420
           PLEGPDQKSFIPVERAESTFLFLVGQDDHNWKSEFYANEACKRLQAHGRRKPQIICYPET
Sbjct: 361 PLEGPDQKSFIPVERAESTFLFLVGQDDHNWKSEFYANEACKRLQAHGRRKPQIICYPET 420

Query: 421 GHYIEPPYFPLCRASLHALVGSPIIWGGEPRAHAMAQVDAWKQLQTFFHKHLGGHEGTIP 480
           GHYIEPPYFPLCRASLHALVGSPIIWGGEPRAHAMAQVDAWKQLQTFFHKHLGGHEGTIP
Sbjct: 421 GHYIEPPYFPLCRASLHALVGSPIIWGGEPRAHAMAQVDAWKQLQTFFHKHLGGHEGTIP 480

Query: 481 SKV 483
           SKV
Sbjct: 481 SKV 483


>gi|81230485 acyl-CoA thioesterase 1 [Homo sapiens]
          Length = 421

 Score =  858 bits (2217), Expect = 0.0
 Identities = 416/421 (98%), Positives = 418/421 (99%)

Query: 63  MAATLILEPAGRCCWDEPVRIAVRGLAPEQPVTLRASLRDEKGALFQAHARYRADTLGEL 122
           MAATLILEPAGRCCWDEPVRIAVRGLAPEQPVTLRASLRDEKGALFQAHARYRADTLGEL
Sbjct: 1   MAATLILEPAGRCCWDEPVRIAVRGLAPEQPVTLRASLRDEKGALFQAHARYRADTLGEL 60

Query: 123 DLERAPALGGSFAGLEPMGLLWALEPEKPLVRLVKRDVRTPLAVELEVLDGHDPDPGRLL 182
           DLERAPALGGSFAGLEPMGLLWALEPEKPLVRLVKRDVRTPLAVELEVLDGHDPDPGRLL
Sbjct: 61  DLERAPALGGSFAGLEPMGLLWALEPEKPLVRLVKRDVRTPLAVELEVLDGHDPDPGRLL 120

Query: 183 CQTRHERYFLPPGVRREPVRVGRVRGTLFLPPEPGPFPGIVDMFGTGGGLLEYRASLLAG 242
           C+ RHERYFLPPGVRREPVR GRVRGTLFLPPEPGPFPGIVDMFGTGGGLLEYRASLLAG
Sbjct: 121 CRVRHERYFLPPGVRREPVRAGRVRGTLFLPPEPGPFPGIVDMFGTGGGLLEYRASLLAG 180

Query: 243 KGFAVMALAYYNYEDLPKTMETLHLEYFEEAMNYLLSHPEVKGPGVGLLGISKGGELCLS 302
           KGFAVMALAYYNYEDLPKTMETLHLEYFEEA+NYLLSHPEVKGPGVGLLGISKGGELCLS
Sbjct: 181 KGFAVMALAYYNYEDLPKTMETLHLEYFEEAVNYLLSHPEVKGPGVGLLGISKGGELCLS 240

Query: 303 MASFLKGITAAVVINGSVANVGGTLHYKGETLPPVGVNRNRIKVTKDGYADIVDVLNSPL 362
           MASFLKGITAAVVINGSVANVGGTL YKGETLPPVGVNRNRIKVTKDGYADIVDVLNSPL
Sbjct: 241 MASFLKGITAAVVINGSVANVGGTLRYKGETLPPVGVNRNRIKVTKDGYADIVDVLNSPL 300

Query: 363 EGPDQKSFIPVERAESTFLFLVGQDDHNWKSEFYANEACKRLQAHGRRKPQIICYPETGH 422
           EGPDQKSFIPVERAESTFLFLVGQDDHNWKSEFYANEACKRLQAHGRRKPQIICYPETGH
Sbjct: 301 EGPDQKSFIPVERAESTFLFLVGQDDHNWKSEFYANEACKRLQAHGRRKPQIICYPETGH 360

Query: 423 YIEPPYFPLCRASLHALVGSPIIWGGEPRAHAMAQVDAWKQLQTFFHKHLGGHEGTIPSK 482
           YIEPPYFPLCRASLHALVGSPIIWGGEPRAHAMAQVDAWKQLQTFFHKHLGGHEGTIPSK
Sbjct: 361 YIEPPYFPLCRASLHALVGSPIIWGGEPRAHAMAQVDAWKQLQTFFHKHLGGHEGTIPSK 420

Query: 483 V 483
           V
Sbjct: 421 V 421


>gi|187761341 acyl-CoA thioesterase 4 [Homo sapiens]
          Length = 421

 Score =  621 bits (1601), Expect = e-178
 Identities = 295/421 (70%), Positives = 341/421 (80%)

Query: 63  MAATLILEPAGRCCWDEPVRIAVRGLAPEQPVTLRASLRDEKGALFQAHARYRADTLGEL 122
           M+ATLILEP GRCCW+EPVRIAVRGLAPEQ VTLRASLRDEKGALF+AHARY AD  GEL
Sbjct: 1   MSATLILEPPGRCCWNEPVRIAVRGLAPEQRVTLRASLRDEKGALFRAHARYCADARGEL 60

Query: 123 DLERAPALGGSFAGLEPMGLLWALEPEKPLVRLVKRDVRTPLAVELEVLDGHDPDPGRLL 182
           DLERAPALGGSFAGLEPMGLLWALEPEKP  R +KRDV+ P  VELEVLDGHDP+PGRLL
Sbjct: 61  DLERAPALGGSFAGLEPMGLLWALEPEKPFWRFLKRDVQIPFVVELEVLDGHDPEPGRLL 120

Query: 183 CQTRHERYFLPPGVRREPVRVGRVRGTLFLPPEPGPFPGIVDMFGTGGGLLEYRASLLAG 242
           CQ +HER+FLPPGVRR+ VR GRVR TLFLPP PGPFPGI+D+FG GGGLLEYRASLLAG
Sbjct: 121 CQAQHERHFLPPGVRRQSVRAGRVRATLFLPPGPGPFPGIIDIFGIGGGLLEYRASLLAG 180

Query: 243 KGFAVMALAYYNYEDLPKTMETLHLEYFEEAMNYLLSHPEVKGPGVGLLGISKGGELCLS 302
            GFA +ALAYYN+EDLP  M+ + LEYFEEA+ Y+L HP+VKGPG+GLLGIS G ++CLS
Sbjct: 181 HGFATLALAYYNFEDLPNNMDNISLEYFEEAVCYMLQHPQVKGPGIGLLGISLGADICLS 240

Query: 303 MASFLKGITAAVVINGSVANVGGTLHYKGETLPPVGVNRNRIKVTKDGYADIVDVLNSPL 362
           MASFLK ++A V INGS  +    ++YK  ++PP+G +  RIKV   G  DIVD+ N+ +
Sbjct: 241 MASFLKNVSATVSINGSGISGNTAINYKHSSIPPLGYDLRRIKVAFSGLVDIVDIRNALV 300

Query: 363 EGPDQKSFIPVERAESTFLFLVGQDDHNWKSEFYANEACKRLQAHGRRKPQIICYPETGH 422
            G    S IP+E+A+   L +VGQDDHNW+SE YA    +RLQAHG+ KPQIICYP TGH
Sbjct: 301 GGYKNPSMIPIEKAQGPILLIVGQDDHNWRSELYAQTVSERLQAHGKEKPQIICYPGTGH 360

Query: 423 YIEPPYFPLCRASLHALVGSPIIWGGEPRAHAMAQVDAWKQLQTFFHKHLGGHEGTIPSK 482
           YIEPPYFPLC ASLH L+   +IWGGEPRAH+ AQ DAWKQ+  FF KHLGG + T   K
Sbjct: 361 YIEPPYFPLCPASLHRLLNKHVIWGGEPRAHSKAQEDAWKQILAFFCKHLGGTQKTAVPK 420

Query: 483 V 483
           +
Sbjct: 421 L 421


>gi|189083866 bile acid Coenzyme A: amino acid N-acyltransferase
           [Homo sapiens]
          Length = 418

 Score =  334 bits (857), Expect = 9e-92
 Identities = 184/401 (45%), Positives = 248/401 (61%), Gaps = 10/401 (2%)

Query: 78  DEPVRIAVRGLAPEQPVTLRASLRDEKGALFQAHARYRADTLGELDLERAPALGGSFAGL 137
           DEPV I   GL P Q V+ +ASL DE G +F + A YRA+  GE+DL  A +LGG + G+
Sbjct: 14  DEPVHIRATGLIPFQMVSFQASLEDENGDMFYSQAHYRANEFGEVDLNHASSLGGDYMGV 73

Query: 138 EPMGLLWALEPEKPLVRLVKRDVRT-PLAVELEVLDGHDPDPGRLLCQTRH----ERYFL 192
            PMGL W+L+PEK L RL+KRDV   P  V++++ D       ++    +     ER+++
Sbjct: 74  HPMGLFWSLKPEKLLTRLLKRDVMNRPFQVQVKLYDLELIVNNKVASAPKASLTLERWYV 133

Query: 193 PPGVRREPVRVGRVRGTLFLPPEPGPFPGIVDMFGTGGGLLEYRASLLAGKGFAVMALAY 252
            PGV R  VR GR+RG LFLPP  G FPG++D+FG  GGLLE+RASLLA +GFA +ALAY
Sbjct: 134 APGVTRIKVREGRLRGALFLPPGEGLFPGVIDLFGGLGGLLEFRASLLASRGFASLALAY 193

Query: 253 YNYEDLPKTMETLHLEYFEEAMNYLLSHPEVKGPGVGLLGISKGGELCLSMASFLKGITA 312
           +NYEDLP+  E   LEYFEEA N+LL HP+V G GVG++ + +G ++ LSMA +LK +TA
Sbjct: 194 HNYEDLPRKPEVTDLEYFEEAANFLLRHPKVFGSGVGVVSVCQGVQIGLSMAIYLKQVTA 253

Query: 313 AVVINGSVANVGGTLHYKGETLPPVGVNRNRIKVTKDGYADIVDVLNSPLEGPDQKSFIP 372
            V+ING+    G    Y G+   P+  +   I     G  ++     +   G  Q  F P
Sbjct: 254 TVLINGTNFPFGIPQVYHGQIHQPLPHSAQLISTNALGLLELYRTFETTQVGASQYLF-P 312

Query: 373 VERAESTFLFLVGQDDHNWKSEFYANEACKRLQAHGRRKPQIICYPETGHYIEPPYFPLC 432
           +E A+  FLF+VG+ D    S+ +A +A  +L+ HG+    ++ YP  GH IEPPY PLC
Sbjct: 313 IEEAQGQFLFIVGEGDKTINSKAHAEQAIGQLKRHGKNNWTLLSYPGAGHLIEPPYSPLC 372

Query: 433 RAS-LHALVGSPIIWGGEPRAHAMAQVDAWKQLQTFFHKHL 472
            AS  H L    + WGGE   HA AQ  AWK++Q F  KHL
Sbjct: 373 CASTTHDL---RLHWGGEVIPHAAAQEHAWKEIQRFLRKHL 410


>gi|4502351 bile acid Coenzyme A: amino acid N-acyltransferase [Homo
           sapiens]
          Length = 418

 Score =  334 bits (857), Expect = 9e-92
 Identities = 184/401 (45%), Positives = 248/401 (61%), Gaps = 10/401 (2%)

Query: 78  DEPVRIAVRGLAPEQPVTLRASLRDEKGALFQAHARYRADTLGELDLERAPALGGSFAGL 137
           DEPV I   GL P Q V+ +ASL DE G +F + A YRA+  GE+DL  A +LGG + G+
Sbjct: 14  DEPVHIRATGLIPFQMVSFQASLEDENGDMFYSQAHYRANEFGEVDLNHASSLGGDYMGV 73

Query: 138 EPMGLLWALEPEKPLVRLVKRDVRT-PLAVELEVLDGHDPDPGRLLCQTRH----ERYFL 192
            PMGL W+L+PEK L RL+KRDV   P  V++++ D       ++    +     ER+++
Sbjct: 74  HPMGLFWSLKPEKLLTRLLKRDVMNRPFQVQVKLYDLELIVNNKVASAPKASLTLERWYV 133

Query: 193 PPGVRREPVRVGRVRGTLFLPPEPGPFPGIVDMFGTGGGLLEYRASLLAGKGFAVMALAY 252
            PGV R  VR GR+RG LFLPP  G FPG++D+FG  GGLLE+RASLLA +GFA +ALAY
Sbjct: 134 APGVTRIKVREGRLRGALFLPPGEGLFPGVIDLFGGLGGLLEFRASLLASRGFASLALAY 193

Query: 253 YNYEDLPKTMETLHLEYFEEAMNYLLSHPEVKGPGVGLLGISKGGELCLSMASFLKGITA 312
           +NYEDLP+  E   LEYFEEA N+LL HP+V G GVG++ + +G ++ LSMA +LK +TA
Sbjct: 194 HNYEDLPRKPEVTDLEYFEEAANFLLRHPKVFGSGVGVVSVCQGVQIGLSMAIYLKQVTA 253

Query: 313 AVVINGSVANVGGTLHYKGETLPPVGVNRNRIKVTKDGYADIVDVLNSPLEGPDQKSFIP 372
            V+ING+    G    Y G+   P+  +   I     G  ++     +   G  Q  F P
Sbjct: 254 TVLINGTNFPFGIPQVYHGQIHQPLPHSAQLISTNALGLLELYRTFETTQVGASQYLF-P 312

Query: 373 VERAESTFLFLVGQDDHNWKSEFYANEACKRLQAHGRRKPQIICYPETGHYIEPPYFPLC 432
           +E A+  FLF+VG+ D    S+ +A +A  +L+ HG+    ++ YP  GH IEPPY PLC
Sbjct: 313 IEEAQGQFLFIVGEGDKTINSKAHAEQAIGQLKRHGKNNWTLLSYPGAGHLIEPPYSPLC 372

Query: 433 RAS-LHALVGSPIIWGGEPRAHAMAQVDAWKQLQTFFHKHL 472
            AS  H L    + WGGE   HA AQ  AWK++Q F  KHL
Sbjct: 373 CASTTHDL---RLHWGGEVIPHAAAQEHAWKEIQRFLRKHL 410


>gi|81230487 acyl-CoA thioesterase 6 [Homo sapiens]
          Length = 207

 Score =  264 bits (674), Expect = 2e-70
 Identities = 120/207 (57%), Positives = 157/207 (75%)

Query: 277 LLSHPEVKGPGVGLLGISKGGELCLSMASFLKGITAAVVINGSVANVGGTLHYKGETLPP 336
           +L HP+VKGP + LLG SKGG+LCLSMASFLKGITA V+IN  VAN    LHYK   +P 
Sbjct: 1   MLQHPKVKGPSIALLGFSKGGDLCLSMASFLKGITATVLINACVANTVAPLHYKDMIIPK 60

Query: 337 VGVNRNRIKVTKDGYADIVDVLNSPLEGPDQKSFIPVERAESTFLFLVGQDDHNWKSEFY 396
           +  +  ++K+TK G+   +D  ++PLE  + +S +P+E+A+  FLF+VG DD +WKSEFY
Sbjct: 61  LVDDLGKVKITKSGFLTFMDTWSNPLEEHNHQSLVPLEKAQVPFLFIVGMDDQSWKSEFY 120

Query: 397 ANEACKRLQAHGRRKPQIICYPETGHYIEPPYFPLCRASLHALVGSPIIWGGEPRAHAMA 456
           A  A +RLQAHG+ +PQIICYPETGH I+PPYFP  RAS+HA++G  I +GGEP+AH+ A
Sbjct: 121 AQIASERLQAHGKERPQIICYPETGHCIDPPYFPPSRASVHAVLGEAIFYGGEPKAHSKA 180

Query: 457 QVDAWKQLQTFFHKHLGGHEGTIPSKV 483
           QVDAW+Q+QTFFHKHL G +    SK+
Sbjct: 181 QVDAWQQIQTFFHKHLNGKKSVKHSKI 207


>gi|169164035 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 171

 Score = 33.5 bits (75), Expect = 0.44
 Identities = 15/28 (53%), Positives = 21/28 (75%)

Query: 86  RGLAPEQPVTLRASLRDEKGALFQAHAR 113
           RGL  E+P TLRA+LR++KG++ Q   R
Sbjct: 111 RGLLSERPFTLRAALREQKGSICQPLVR 138


>gi|169163250 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 171

 Score = 33.5 bits (75), Expect = 0.44
 Identities = 15/28 (53%), Positives = 21/28 (75%)

Query: 86  RGLAPEQPVTLRASLRDEKGALFQAHAR 113
           RGL  E+P TLRA+LR++KG++ Q   R
Sbjct: 111 RGLLSERPFTLRAALREQKGSICQPLVR 138


>gi|7662310 FERM, RhoGEF and pleckstrin domain protein 2 [Homo
           sapiens]
          Length = 1054

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 28/113 (24%), Positives = 49/113 (43%), Gaps = 10/113 (8%)

Query: 91  EQPVTLRASLRDEKGALFQAHARYRADTLGELDLERAPALGGSFAGLEPMGL----LWAL 146
           E+ + LR  L D    +F    +     L     +R   +   + G+E        +W L
Sbjct: 41  EKHLHLRVKLLDNTMEIFDIEPKCDGQVLLTQVWKRLNLVECDYFGMEFQNTQSYWIW-L 99

Query: 147 EPEKPLVRLVKRDVRTPLAVELEVLDGHDPDPGRLLCQTRHERYFLPPGVRRE 199
           EP KP++R ++R     L + ++      PDPG+L  Q  + RY     ++R+
Sbjct: 100 EPMKPIIRQIRRPKNVVLRLAVKFF---PPDPGQL--QEEYTRYLFALQLKRD 147


>gi|115583670 T-cell lymphoma invasion and metastasis 1 [Homo
           sapiens]
          Length = 1591

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 37/150 (24%), Positives = 61/150 (40%), Gaps = 10/150 (6%)

Query: 247 VMALAYYNYEDLPKTMETLHLEYFEEAMN-YLLSHPEVKGPGVGLLGISKGGELCLSMAS 305
           +  L Y   E  PK  +++H+E  + A + Y  S   V+  G+  L ++   E  L+   
Sbjct: 828 IYELLYKEIEICPKVTQSIHIEKSDTAADTYGFSLSSVEEDGIRRLYVNSVKETGLASKK 887

Query: 306 FLKGITAAVVINGSVANVGGTLHYKG-ETLPPVGVNRNRIKVTKDGYADIVDVLNSPLEG 364
            LK     + IN   A+   +   K   + P +G+        ++G    V++L SP   
Sbjct: 888 GLKAGDEILEINNRAADALNSSMLKDFLSQPSLGLLVRTYPELEEG----VELLESPPHR 943

Query: 365 PDQKSFIPVERAESTFLFLVGQDDHNWKSE 394
            D     P +  ES   FL     H+  SE
Sbjct: 944 VDG----PADLGESPLAFLTSNPGHSLCSE 969


>gi|18093112 ABT1-associated protein [Homo sapiens]
          Length = 851

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 21/87 (24%), Positives = 38/87 (43%), Gaps = 14/87 (16%)

Query: 329 YKGETLPPVGVNRNRIKVTKDGYADIVDVLNSPLEGPDQKSFIPVERAESTFLFLVGQDD 388
           Y  E +  +G+N+  +K  KDG         SP E       I +ER ++    L+  +D
Sbjct: 671 YFAEEVKQIGINKKSVKSAKDG--------TSPEEE------IEIERQKAEMALLMMDED 716

Query: 389 HNWKSEFYANEACKRLQAHGRRKPQII 415
            + K  F  N+  +      ++K Q++
Sbjct: 717 EDSKKHFNYNKIVEHQNLSKKKKKQLM 743


>gi|118601070 hypothetical protein LOC158724 [Homo sapiens]
          Length = 791

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 39/141 (27%), Positives = 54/141 (38%), Gaps = 11/141 (7%)

Query: 79  EPVRIAVRGLAPEQPVTLRASLRDEKGALFQAHARYRADTLGELDLERAPALGGSFAGLE 138
           EP    V  L+PE P T  +SLR E      +H R      G   +   P +    + L 
Sbjct: 202 EPPETGVSHLSPEPPKTPVSSLRPEPPETGVSHLRPEPPETGVSHIRPGPPITRRRSSL- 260

Query: 139 PMGLLWALEPEKPLVRLVKRDVRTPLAVELEVLDGHDPDPGRLLCQTRHERYFLPP--GV 196
            +  L  L+ E+ L      D R P     +  D    +PG+  C     R F  P   +
Sbjct: 261 -LRQLLKLDSERKL-----EDARAPCEGREKTTD-EPTEPGKYPCGKFCPRPFETPLSHL 313

Query: 197 RREPVRVGRVRGTLFLPPEPG 217
           R+EP +   V      PPE G
Sbjct: 314 RQEPPKT-PVSSLRPEPPETG 333


>gi|215599424 glutamic pyruvate transaminase 2 isoform 2 [Homo
           sapiens]
          Length = 423

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 27/108 (25%), Positives = 47/108 (43%), Gaps = 10/108 (9%)

Query: 274 MNYLLSHPEVKGPGVGLLGISKGGELCLSMASFLKGITAAVVINGSVANVGGTLHYKGET 333
           M  +  HPE+KG  V LL +     LC  ++         +V+N  VA       +  E 
Sbjct: 254 MEVINLHPEIKGQLVKLLSV----RLCPPVSG---QAAMDIVVNPPVAGEESFEQFSREK 306

Query: 334 LPPVGVNRNRIKVTKDGYADIVDVLNSPLEG---PDQKSFIPVERAES 378
              +G    + K+T+D +  +  +  +PL+G      + FIP +  E+
Sbjct: 307 ESVLGNLAKKAKLTEDLFNQVPGIHCNPLQGAMYAFPRIFIPAKAVEA 354


>gi|19263340 glutamic pyruvate transaminase 2 isoform 1 [Homo
           sapiens]
          Length = 523

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 27/108 (25%), Positives = 47/108 (43%), Gaps = 10/108 (9%)

Query: 274 MNYLLSHPEVKGPGVGLLGISKGGELCLSMASFLKGITAAVVINGSVANVGGTLHYKGET 333
           M  +  HPE+KG  V LL +     LC  ++         +V+N  VA       +  E 
Sbjct: 354 MEVINLHPEIKGQLVKLLSV----RLCPPVSG---QAAMDIVVNPPVAGEESFEQFSREK 406

Query: 334 LPPVGVNRNRIKVTKDGYADIVDVLNSPLEG---PDQKSFIPVERAES 378
              +G    + K+T+D +  +  +  +PL+G      + FIP +  E+
Sbjct: 407 ESVLGNLAKKAKLTEDLFNQVPGIHCNPLQGAMYAFPRIFIPAKAVEA 454


>gi|169171852 PREDICTED: similar to vacuolar protein sorting 35
           [Homo sapiens]
          Length = 363

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 5/88 (5%)

Query: 328 HYKG-ETLPPVGVNR-NRIKVTK--DGYADIVDVLNSPLEGPDQKSFIPVERAESTFLFL 383
           HY G E L  V V + N +K  K  D  A I D  + P+E PD + F   +     F+ L
Sbjct: 5   HYAGHELLQNVEVIKCNCVKKNKKVDAAASIKDQPDQPVEDPDPEDFADEQSLVGRFIHL 64

Query: 384 VGQDDHNWKSEFYANEACKRLQAHGRRK 411
           +  +D + +     N A K   A G ++
Sbjct: 65  LRSEDPD-QQYLILNTARKHFGAGGNQR 91


>gi|223005950 SH3KBP1 binding protein 1 [Homo sapiens]
          Length = 707

 Score = 29.3 bits (64), Expect = 8.3
 Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%)

Query: 423 YIEPPYFPLCRASLHALVGSPIIWGGEP 450
           Y+ PP FP+ R + H+LVG P   GG P
Sbjct: 129 YLPPPVFPVKRRNRHSLVG-PQQLGGRP 155


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.139    0.430 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,624,665
Number of Sequences: 37866
Number of extensions: 1121683
Number of successful extensions: 2079
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 2061
Number of HSP's gapped (non-prelim): 19
length of query: 483
length of database: 18,247,518
effective HSP length: 106
effective length of query: 377
effective length of database: 14,233,722
effective search space: 5366113194
effective search space used: 5366113194
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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