Guide to the Human Genome
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Search of human proteins with 148612887

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|148612887 choline transporter-like protein 4 [Homo sapiens]
         (710 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|148612887 choline transporter-like protein 4 [Homo sapiens]       1447   0.0  
gi|222831610 solute carrier family 44, member 2 isoform 2 [Homo ...   730   0.0  
gi|222831612 solute carrier family 44, member 2 isoform 1 [Homo ...   728   0.0  
gi|194239633 solute carrier family 44, member 5 isoform B [Homo ...   697   0.0  
gi|194239631 solute carrier family 44, member 5 isoform A [Homo ...   692   0.0  
gi|18034692 CDW92 antigen [Homo sapiens]                              250   3e-66
gi|166235173 solute carrier family 44, member 3 isoform 1 [Homo ...   218   1e-56
gi|166235171 solute carrier family 44, member 3 isoform 2 [Homo ...   206   5e-53
gi|21264580 tetraspan 2 [Homo sapiens]                                 36   0.11 
gi|4502827 cholinergic receptor, nicotinic, alpha 4 subunit prec...    33   1.2  
gi|157388902 semaphorin 4C [Homo sapiens]                              32   1.6  
gi|4502187 aquaporin 7 [Homo sapiens]                                  30   5.9  
gi|21729876 ATP-binding cassette, sub-family C, member 11 isofor...    30   7.7  
gi|21729873 ATP-binding cassette, sub-family C, member 11 isofor...    30   7.7  
gi|15149474 ATP-binding cassette, sub-family C, member 11 isofor...    30   7.7  

>gi|148612887 choline transporter-like protein 4 [Homo sapiens]
          Length = 710

 Score = 1447 bits (3745), Expect = 0.0
 Identities = 710/710 (100%), Positives = 710/710 (100%)

Query: 1   MGGKQRDEDDEAYGKPVKYDPSFRGPIKNRSCTDVICCVLFLLFILGYIVVGIVAWLYGD 60
           MGGKQRDEDDEAYGKPVKYDPSFRGPIKNRSCTDVICCVLFLLFILGYIVVGIVAWLYGD
Sbjct: 1   MGGKQRDEDDEAYGKPVKYDPSFRGPIKNRSCTDVICCVLFLLFILGYIVVGIVAWLYGD 60

Query: 61  PRQVLYPRNSTGAYCGMGENKDKPYLLYFNIFSCILSSNIISVAENGLQCPTPQVCVSSC 120
           PRQVLYPRNSTGAYCGMGENKDKPYLLYFNIFSCILSSNIISVAENGLQCPTPQVCVSSC
Sbjct: 61  PRQVLYPRNSTGAYCGMGENKDKPYLLYFNIFSCILSSNIISVAENGLQCPTPQVCVSSC 120

Query: 121 PEDPWTVGKNEFSQTVGEVFYTKNRNFCLPGVPWNMTVITSLQQELCPSFLLPSAPALGR 180
           PEDPWTVGKNEFSQTVGEVFYTKNRNFCLPGVPWNMTVITSLQQELCPSFLLPSAPALGR
Sbjct: 121 PEDPWTVGKNEFSQTVGEVFYTKNRNFCLPGVPWNMTVITSLQQELCPSFLLPSAPALGR 180

Query: 181 CFPWTNVTPPALPGITNDTTIQQGISGLIDSLNARDISVKIFEDFAQSWYWILVALGVAL 240
           CFPWTNVTPPALPGITNDTTIQQGISGLIDSLNARDISVKIFEDFAQSWYWILVALGVAL
Sbjct: 181 CFPWTNVTPPALPGITNDTTIQQGISGLIDSLNARDISVKIFEDFAQSWYWILVALGVAL 240

Query: 241 VLSLLFILLLRLVAGPLVLVLILGVLGVLAYGIYYCWEEYRVLRDKGASISQLGFTTNLS 300
           VLSLLFILLLRLVAGPLVLVLILGVLGVLAYGIYYCWEEYRVLRDKGASISQLGFTTNLS
Sbjct: 241 VLSLLFILLLRLVAGPLVLVLILGVLGVLAYGIYYCWEEYRVLRDKGASISQLGFTTNLS 300

Query: 301 AYQSVQETWLAALIVLAVLEAILLLMLIFLRQRIRIAIALLKEASKAVGQMMSTMFYPLV 360
           AYQSVQETWLAALIVLAVLEAILLLMLIFLRQRIRIAIALLKEASKAVGQMMSTMFYPLV
Sbjct: 301 AYQSVQETWLAALIVLAVLEAILLLMLIFLRQRIRIAIALLKEASKAVGQMMSTMFYPLV 360

Query: 361 TFVLLLICIAYWAMTALYLATSGQPQYVLWASNISSPGCEKVPINTSCNPTAHLVNSSCP 420
           TFVLLLICIAYWAMTALYLATSGQPQYVLWASNISSPGCEKVPINTSCNPTAHLVNSSCP
Sbjct: 361 TFVLLLICIAYWAMTALYLATSGQPQYVLWASNISSPGCEKVPINTSCNPTAHLVNSSCP 420

Query: 421 GLMCVFQGYSSKGLIQRSVFNLQIYGVLGLFWTLNWVLALGQCVLAGAFASFYWAFHKPQ 480
           GLMCVFQGYSSKGLIQRSVFNLQIYGVLGLFWTLNWVLALGQCVLAGAFASFYWAFHKPQ
Sbjct: 421 GLMCVFQGYSSKGLIQRSVFNLQIYGVLGLFWTLNWVLALGQCVLAGAFASFYWAFHKPQ 480

Query: 481 DIPTFPLISAFIRTLRYHTGSLAFGALILTLVQIARVILEYIDHKLRGVQNPVARCIMCC 540
           DIPTFPLISAFIRTLRYHTGSLAFGALILTLVQIARVILEYIDHKLRGVQNPVARCIMCC
Sbjct: 481 DIPTFPLISAFIRTLRYHTGSLAFGALILTLVQIARVILEYIDHKLRGVQNPVARCIMCC 540

Query: 541 FKCCLWCLEKFIKFLNRNAYIMIAIYGKNFCVSAKNAFMLLMRNIVRVVVLDKVTDLLLF 600
           FKCCLWCLEKFIKFLNRNAYIMIAIYGKNFCVSAKNAFMLLMRNIVRVVVLDKVTDLLLF
Sbjct: 541 FKCCLWCLEKFIKFLNRNAYIMIAIYGKNFCVSAKNAFMLLMRNIVRVVVLDKVTDLLLF 600

Query: 601 FGKLLVVGGVGVLSFFFFSGRIPGLGKDFKSPHLNYYWLPIMTSILGAYVIASGFFSVFG 660
           FGKLLVVGGVGVLSFFFFSGRIPGLGKDFKSPHLNYYWLPIMTSILGAYVIASGFFSVFG
Sbjct: 601 FGKLLVVGGVGVLSFFFFSGRIPGLGKDFKSPHLNYYWLPIMTSILGAYVIASGFFSVFG 660

Query: 661 MCVDTLFLCFLEDLERNNGSLDRPYYMSKSLLKILGKKNEAPPDNKKRKK 710
           MCVDTLFLCFLEDLERNNGSLDRPYYMSKSLLKILGKKNEAPPDNKKRKK
Sbjct: 661 MCVDTLFLCFLEDLERNNGSLDRPYYMSKSLLKILGKKNEAPPDNKKRKK 710


>gi|222831610 solute carrier family 44, member 2 isoform 2 [Homo
           sapiens]
          Length = 704

 Score =  730 bits (1885), Expect = 0.0
 Identities = 377/710 (53%), Positives = 489/710 (68%), Gaps = 40/710 (5%)

Query: 12  AYGKPVKYDPSFRGPIKNRSCTDVICCVLFLLFILGYIVVGIVAWLYGDPRQVLYPRNST 71
           AYG P KYDP+F+GPI NR CTD+ICCV  LL I+GY+ VGI+AW +GDPR+V+YP +S 
Sbjct: 9   AYGTPQKYDPTFKGPIYNRGCTDIICCVFLLLAIVGYVAVGIIAWTHGDPRKVIYPTDSR 68

Query: 72  GAYCGMG--ENKDKPYLLYFNIFSCILSSNIISVAENGLQCPTPQVCVSSCPEDPWTVGK 129
           G +CG    +N++KPYL YFNI  C     ++       QCPTPQ+CV  CP D +    
Sbjct: 69  GEFCGQKGTKNENKPYLFYFNIVKCASPLVLLE-----FQCPTPQICVEKCP-DRYLTYL 122

Query: 130 NEFSQTVGEVFYTKNRNFCLPGVPWNMTVITSLQQELCPSFLLPSAPALGRCFPWTNVTP 189
           N  S    E +    + FC+PG   N  V   LQ   CP+ L+PS P   RCFP  +   
Sbjct: 123 NARSSRDFEYY----KQFCVPGFKNNKGVAEVLQDGDCPAVLIPSKPLARRCFPAIHAYK 178

Query: 190 PALPGITNDTTIQQG------ISGLIDS-------LNARDISVKIFEDFAQSWYWILVAL 236
             L  + N+TT + G      I+ L++        L AR ++++IFED+  SWYWI++ L
Sbjct: 179 GVLM-VGNETTYEDGHGSRKNITDLVEGAKKANGVLEARQLAMRIFEDYTVSWYWIIIGL 237

Query: 237 GVALVLSLLFILLLRLVAGPLVLVLILGVLGVLAYGIYYCWEEYRVLRDKGAS---ISQL 293
            +A+ +SLLFI+LLR +AG +V V+I+ V+ VL YGI++C+ EY  LR +  S   +  L
Sbjct: 238 VIAMAMSLLFIILLRFLAGIMVWVMIIMVILVLGYGIFHCYMEYSRLRGEAGSDVSLVDL 297

Query: 294 GFTTNLSAYQSVQETWLAALIVLAVLEAILLLMLIFLRQRIRIAIALLKEASKAVGQMMS 353
           GF T+   Y  +++TWLA +I+L++LE I++L+LIFLR+RI IAIAL+KEAS+AVG +M 
Sbjct: 298 GFQTDFRVYLHLRQTWLAFMIILSILEVIIILLLIFLRKRILIAIALIKEASRAVGYVMC 357

Query: 354 TMFYPLVTFVLLLICIAYWAMTALYLATSGQPQYVLWASNISSPGCEKVPINTSCNP-TA 412
           ++ YPLVTF LL +CIAYWA TA++L+TS +  Y ++  +   P   K     +CNP T 
Sbjct: 358 SLLYPLVTFFLLCLCIAYWASTAVFLSTSNEAVYKIFDDS-PCPFTAK-----TCNPETF 411

Query: 413 HLVNSS--CPGLMCVFQGYSSKGLIQRSVFNLQIYGVLGLFWTLNWVLALGQCVLAGAFA 470
              N S  CP   C F  Y  +    R++  LQI+     FW  N+VLALGQ  LAGAFA
Sbjct: 412 PSSNESRQCPNARCQFAFYGGESGYHRALLGLQIFNAFMFFWLANFVLALGQVTLAGAFA 471

Query: 471 SFYWAFHKPQDIPTFPLISAFIRTLRYHTGSLAFGALILTLVQIARVILEYIDHKLRGVQ 530
           S+YWA  KP D+P FPL SAF R LRYHTGSLAFGALIL +VQI RVILEY+D +L+  +
Sbjct: 472 SYYWALRKPDDLPAFPLFSAFGRALRYHTGSLAFGALILAIVQIIRVILEYLDQRLKAAE 531

Query: 531 NPVARCIMCCFKCCLWCLEKFIKFLNRNAYIMIAIYGKNFCVSAKNAFMLLMRNIVRVVV 590
           N  A+C+M C KCC WCLEKFIKFLNRNAYIMIAIYG NFC SA+NAF LLMRNI+RV V
Sbjct: 532 NKFAKCLMTCLKCCFWCLEKFIKFLNRNAYIMIAIYGTNFCTSARNAFFLLMRNIIRVAV 591

Query: 591 LDKVTDLLLFFGKLLVVGGVGVLSFFFFSGRIPGLGKDFKSPHLNYYWLPIMTSILGAYV 650
           LDKVTD L   GKLL+VG VG+L+FFFF+ RI  + +D  +P LNYYW+PI+T I+G+Y+
Sbjct: 592 LDKVTDFLFLLGKLLIVGSVGILAFFFFTHRI-RIVQD-TAPPLNYYWVPILTVIVGSYL 649

Query: 651 IASGFFSVFGMCVDTLFLCFLEDLERNNGSLDRPYYMSKSLLKILGKKNE 700
           IA GFFSV+GMCVDTLFLCFLEDLERN+GS +RPY+MS +L K+L K N+
Sbjct: 650 IAHGFFSVYGMCVDTLFLCFLEDLERNDGSAERPYFMSSTLKKLLNKTNK 699


>gi|222831612 solute carrier family 44, member 2 isoform 1 [Homo
           sapiens]
          Length = 706

 Score =  728 bits (1879), Expect = 0.0
 Identities = 379/718 (52%), Positives = 491/718 (68%), Gaps = 43/718 (5%)

Query: 7   DEDDEAYGK---PVKYDPSFRGPIKNRSCTDVICCVLFLLFILGYIVVGIVAWLYGDPRQ 63
           DE    YGK   P KYDP+F+GPI NR CTD+ICCV  LL I+GY+ VGI+AW +GDPR+
Sbjct: 3   DERPHYYGKHGTPQKYDPTFKGPIYNRGCTDIICCVFLLLAIVGYVAVGIIAWTHGDPRK 62

Query: 64  VLYPRNSTGAYCGMG--ENKDKPYLLYFNIFSCILSSNIISVAENGLQCPTPQVCVSSCP 121
           V+YP +S G +CG    +N++KPYL YFNI  C     ++       QCPTPQ+CV  CP
Sbjct: 63  VIYPTDSRGEFCGQKGTKNENKPYLFYFNIVKCASPLVLLE-----FQCPTPQICVEKCP 117

Query: 122 EDPWTVGKNEFSQTVGEVFYTKNRNFCLPGVPWNMTVITSLQQELCPSFLLPSAPALGRC 181
            D +    N  S    E +    + FC+PG   N  V   LQ   CP+ L+PS P   RC
Sbjct: 118 -DRYLTYLNARSSRDFEYY----KQFCVPGFKNNKGVAEVLQDGDCPAVLIPSKPLARRC 172

Query: 182 FPWTNVTPPALPGITNDTTIQQG------ISGLIDS-------LNARDISVKIFEDFAQS 228
           FP  +     L  + N+TT + G      I+ L++        L AR ++++IFED+  S
Sbjct: 173 FPAIHAYKGVLM-VGNETTYEDGHGSRKNITDLVEGAKKANGVLEARQLAMRIFEDYTVS 231

Query: 229 WYWILVALGVALVLSLLFILLLRLVAGPLVLVLILGVLGVLAYGIYYCWEEYRVLRDKGA 288
           WYWI++ L +A+ +SLLFI+LLR +AG +V V+I+ V+ VL YGI++C+ EY  LR +  
Sbjct: 232 WYWIIIGLVIAMAMSLLFIILLRFLAGIMVWVMIIMVILVLGYGIFHCYMEYSRLRGEAG 291

Query: 289 S---ISQLGFTTNLSAYQSVQETWLAALIVLAVLEAILLLMLIFLRQRIRIAIALLKEAS 345
           S   +  LGF T+   Y  +++TWLA +I+L++LE I++L+LIFLR+RI IAIAL+KEAS
Sbjct: 292 SDVSLVDLGFQTDFRVYLHLRQTWLAFMIILSILEVIIILLLIFLRKRILIAIALIKEAS 351

Query: 346 KAVGQMMSTMFYPLVTFVLLLICIAYWAMTALYLATSGQPQYVLWASNISSPGCEKVPIN 405
           +AVG +M ++ YPLVTF LL +CIAYWA TA++L+TS +  Y ++  +   P   K    
Sbjct: 352 RAVGYVMCSLLYPLVTFFLLCLCIAYWASTAVFLSTSNEAVYKIFDDS-PCPFTAK---- 406

Query: 406 TSCNP-TAHLVNSS--CPGLMCVFQGYSSKGLIQRSVFNLQIYGVLGLFWTLNWVLALGQ 462
            +CNP T    N S  CP   C F  Y  +    R++  LQI+     FW  N+VLALGQ
Sbjct: 407 -TCNPETFPSSNESRQCPNARCQFAFYGGESGYHRALLGLQIFNAFMFFWLANFVLALGQ 465

Query: 463 CVLAGAFASFYWAFHKPQDIPTFPLISAFIRTLRYHTGSLAFGALILTLVQIARVILEYI 522
             LAGAFAS+YWA  KP D+P FPL SAF R LRYHTGSLAFGALIL +VQI RVILEY+
Sbjct: 466 VTLAGAFASYYWALRKPDDLPAFPLFSAFGRALRYHTGSLAFGALILAIVQIIRVILEYL 525

Query: 523 DHKLRGVQNPVARCIMCCFKCCLWCLEKFIKFLNRNAYIMIAIYGKNFCVSAKNAFMLLM 582
           D +L+  +N  A+C+M C KCC WCLEKFIKFLNRNAYIMIAIYG NFC SA+NAF LLM
Sbjct: 526 DQRLKAAENKFAKCLMTCLKCCFWCLEKFIKFLNRNAYIMIAIYGTNFCTSARNAFFLLM 585

Query: 583 RNIVRVVVLDKVTDLLLFFGKLLVVGGVGVLSFFFFSGRIPGLGKDFKSPHLNYYWLPIM 642
           RNI+RV VLDKVTD L   GKLL+VG VG+L+FFFF+ RI  + +D  +P LNYYW+PI+
Sbjct: 586 RNIIRVAVLDKVTDFLFLLGKLLIVGSVGILAFFFFTHRI-RIVQD-TAPPLNYYWVPIL 643

Query: 643 TSILGAYVIASGFFSVFGMCVDTLFLCFLEDLERNNGSLDRPYYMSKSLLKILGKKNE 700
           T I+G+Y+IA GFFSV+GMCVDTLFLCFLEDLERN+GS +RPY+MS +L K+L K N+
Sbjct: 644 TVIVGSYLIAHGFFSVYGMCVDTLFLCFLEDLERNDGSAERPYFMSSTLKKLLNKTNK 701


>gi|194239633 solute carrier family 44, member 5 isoform B [Homo
           sapiens]
          Length = 717

 Score =  697 bits (1800), Expect = 0.0
 Identities = 338/721 (46%), Positives = 487/721 (67%), Gaps = 37/721 (5%)

Query: 9   DDEAYGKPVKYDPSFRGPIKNRSCTDVICCVLFLLFILGYIVVGIVAWLYGDPRQVLYPR 68
           ++E +G P  YDP F+GP+ NRSCTDV+CC++FLL I+GYIV+G+VAW++GDPR+  YP 
Sbjct: 13  EEEDFGDPRTYDPDFKGPVANRSCTDVLCCMIFLLCIIGYIVLGLVAWVHGDPRRAAYPT 72

Query: 69  NSTGAYCGMG--ENKDKPYLLYFNIFSCILSSNIISVAENGLQCPTPQVCVSSCPEDPWT 126
           +S G +CG     N++K  L YFN+  C   S +++     LQCPT Q+CVS CPE   T
Sbjct: 73  DSQGHFCGQKGTPNENKTILFYFNLLRCTSPSVLLN-----LQCPTTQICVSKCPEKFLT 127

Query: 127 VGKNEFSQTVGEVFYTKNRNFCLPGVPWNMTVITSLQQELCPSFLLPSAPALGRCFPWTN 186
             + +   T  + ++   R FC        ++   L  + CP+ + PS P L RCFP  +
Sbjct: 128 YVEMQLLYTKDKSYWEDYRQFCKTTAKPVKSLTQLLLDDDCPTAIFPSKPFLQRCFPDFS 187

Query: 187 VTPPALPGITNDTTIQQG-------------ISGLIDSLNARDISVKIFEDFAQSWYWIL 233
                L  I +    Q G              +G+   L+A+ + +K+FED+A++WYWIL
Sbjct: 188 TKNGTLT-IGSKMMFQDGNGGTRSVVELGIAANGINKLLDAKSLGLKVFEDYARTWYWIL 246

Query: 234 VALGVALVLSLLFILLLRLVAGPLVLVLILGVLGVLAYGIYYCWEEYRVLRDKGAS---I 290
           + L +A+VLS +F++LLR +AG L  V ++GV+G++ YGI++C+++Y  L+++ +S   I
Sbjct: 247 IGLTIAMVLSWIFLILLRFIAGCLFWVFMIGVIGIIGYGIWHCYQQYTNLQERPSSVLTI 306

Query: 291 SQLGFTTNLSAYQSVQETWLAALIVLAVLEAILLLMLIFLRQRIRIAIALLKEASKAVGQ 350
             +G  TN+S Y  +Q+TW   +I+L ++E I++LMLIFLR RIR+AI LLKE SKA+G 
Sbjct: 307 YDIGIQTNISMYFELQQTWFTFMIILCIIEVIVILMLIFLRNRIRVAIILLKEGSKAIGY 366

Query: 351 MMSTMFYPLVTFVLLLICIAYWAMTALYLATSGQPQYVLWASNISSPGCEKVPINTSCNP 410
           + ST+ YP +TF+LL ICI YW +TA++LATSG P Y      + +PG   +  N +C+P
Sbjct: 367 VPSTLVYPALTFILLSICICYWVVTAVFLATSGVPVY-----KVIAPGGHCIHENQTCDP 421

Query: 411 ---TAHLVNSSCPGLMCVFQGYSSKGLIQRSVFNLQIYGVLGLFWTLNWVLALGQCVLAG 467
                  +  +CPG +C F  Y  K L  + +    +Y +    W +N+V+ALGQC LAG
Sbjct: 422 EIFNTTEIAKACPGALCNFAFYGGKSLYHQYIPTFHVYNLFVFLWLINFVIALGQCALAG 481

Query: 468 AFASFYWAFHKPQDIPTFPLISAFIRTLRYHTGSLAFGALILTLVQIARVILEYIDHKLR 527
           AFA++YWA  KP DIP +PL +AF R +RYHTGSLAFG+LI+ L+Q+ +++LEY+DH+L+
Sbjct: 482 AFATYYWAMKKPDDIPRYPLFTAFGRAIRYHTGSLAFGSLIIALIQMFKIVLEYLDHRLK 541

Query: 528 GVQNPVARCIMCCFKCCLWCLEKFIKFLNRNAYIMIAIYGKNFCVSAKNAFMLLMRNIVR 587
             QN +++ + CC +CC WCLE  IKFLNRNAYIMIAIYG+NFC SAK+AF LLMRN+++
Sbjct: 542 RTQNTLSKFLQCCLRCCFWCLENAIKFLNRNAYIMIAIYGRNFCRSAKDAFNLLMRNVLK 601

Query: 588 VVVLDKVTDLLLFFGKLLVVGGVGVLSFFFFSGRIPGLGKDFKSPHLNYYWLPIMTSILG 647
           V V D+VT  +LF GKLLV G +GVL+F FF+ R+P + +   S  LNYYW+P++T I G
Sbjct: 602 VAVTDEVTYFVLFLGKLLVAGSIGVLAFLFFTQRLPVIAQGPAS--LNYYWVPLLTVIFG 659

Query: 648 AYVIASGFFSVFGMCVDTLFLCFLEDLERNNGSLDRPYYMSKSLLKILGKKNEAPPDNKK 707
           +Y+IA GFFSV+ MCV+T+F+CFLEDLERN+GS  RPYY+S+ LLKI  ++N   P  +K
Sbjct: 660 SYLIAHGFFSVYAMCVETIFICFLEDLERNDGSTARPYYVSQPLLKIFQEEN---PQTRK 716

Query: 708 R 708
           +
Sbjct: 717 Q 717


>gi|194239631 solute carrier family 44, member 5 isoform A [Homo
           sapiens]
          Length = 719

 Score =  692 bits (1786), Expect = 0.0
 Identities = 334/720 (46%), Positives = 484/720 (67%), Gaps = 34/720 (4%)

Query: 9   DDEAYGKPVKYDPSFRGPIKNRSCTDVICCVLFLLFILGYIVVGIVAWLYGDPRQVLYPR 68
           ++E +G P  YDP F+GP+ NRSCTDV+CC++FLL I+GYIV+G+VAW++GDPR+  YP 
Sbjct: 13  EEEDFGDPRTYDPDFKGPVANRSCTDVLCCMIFLLCIIGYIVLGLVAWVHGDPRRAAYPT 72

Query: 69  NSTGAYCGMG--ENKDKPYLLYFNIFSCILSSNIISVAENGLQCPTPQVCVSSCPEDPWT 126
           +S G +CG     N++K  L YFN+  C   S +++     LQCPT Q+CVS CPE   T
Sbjct: 73  DSQGHFCGQKGTPNENKTILFYFNLLRCTSPSVLLN-----LQCPTTQICVSKCPEKFLT 127

Query: 127 VGKNEFSQTVGEVFYTKNRNFCLPGVPWNMTVITSLQQELCPSFLLPSAPALGRCFPWTN 186
             + +   T  + ++   R FC        ++   L  + CP+ + PS P L RCFP  +
Sbjct: 128 YVEMQLLYTKDKSYWEDYRQFCKTTAKPVKSLTQLLLDDDCPTAIFPSKPFLQRCFPDFS 187

Query: 187 VTPPALPGITNDTTIQQG-------------ISGLIDSLNARDISVKIFEDFAQSWYWIL 233
                L  I +    Q G              +G+   L+A+ + +K+FED+A++WYWIL
Sbjct: 188 TKNGTLT-IGSKMMFQDGNGGTRSVVELGIAANGINKLLDAKSLGLKVFEDYARTWYWIL 246

Query: 234 VALGVALVLSLLFILLLRLVAGPLVLVLILGVLGVLAYGIYYCWEEYRVLRDKGAS---I 290
           + L +A+VLS +F++LLR +AG L  V ++GV+G++ YGI++C+++Y  L+++ +S   I
Sbjct: 247 IGLTIAMVLSWIFLILLRFIAGCLFWVFMIGVIGIIGYGIWHCYQQYTNLQERPSSVLTI 306

Query: 291 SQLGFTTNLSAYQSVQETWLAALIVLAVLEAILLLMLIFLRQRIRIAIALLKEASKAVGQ 350
             +G  TN+S Y  +Q+TW   +I+L ++E I++LMLIFLR RIR+AI LLKE SKA+G 
Sbjct: 307 YDIGIQTNISMYFELQQTWFTFMIILCIIEVIVILMLIFLRNRIRVAIILLKEGSKAIGY 366

Query: 351 MMSTMFYPLVTFVLLLICIAYWAMTALYLATSGQPQYVLWASNISSPGCEKVPINTSCNP 410
           + ST+ YP +TF+LL ICI YW +TA++LATSG P Y      + +PG   +  N +C+P
Sbjct: 367 VPSTLVYPALTFILLSICICYWVVTAVFLATSGVPVY-----KVIAPGGHCIHENQTCDP 421

Query: 411 ---TAHLVNSSCPGLMCVFQGYSSKGLIQRSVFNLQIYGVLGLFWTLNWVLALGQCVLAG 467
                  +  +CPG +C F  Y  K L  + +    +Y +    W +N+V+ALGQC LAG
Sbjct: 422 EIFNTTEIAKACPGALCNFAFYGGKSLYHQYIPTFHVYNLFVFLWLINFVIALGQCALAG 481

Query: 468 AFASFYWAFHKPQDIPTFPLISAFIRTLRYHTGSLAFGALILTLVQIARVILEYIDHKLR 527
           AFA++YWA  KP DIP +PL +AF R +RYHTGSLAFG+LI+ L+Q+ +++LEY+DH+L+
Sbjct: 482 AFATYYWAMKKPDDIPRYPLFTAFGRAIRYHTGSLAFGSLIIALIQMFKIVLEYLDHRLK 541

Query: 528 GVQNPVARCIMCCFKCCLWCLEKFIKFLNRNAYIMIAIYGKNFCVSAKNAFMLLMRNIVR 587
             QN +++ + CC +CC WCLE  IKFLNRNAYIMIAIYG+NFC SAK+AF LLMRN+++
Sbjct: 542 RTQNTLSKFLQCCLRCCFWCLENAIKFLNRNAYIMIAIYGRNFCRSAKDAFNLLMRNVLK 601

Query: 588 VVVLDKVTDLLLFFGKLLVVGGVGVLSFFFFSGRIPGLGKDFKSPHLNYYWLPIMTSILG 647
           V V D+VT  +LF GKLLV G +GVL+F FF+ R+P + +   S  LNYYW+P++T I G
Sbjct: 602 VAVTDEVTYFVLFLGKLLVAGSIGVLAFLFFTQRLPVIAQGPAS--LNYYWVPLLTVIFG 659

Query: 648 AYVIASGFFSVFGMCVDTLFLCFLEDLERNNGSLDRPYYMSKSLLKILGKKNEAPPDNKK 707
           +Y+IA GFFSV+ MCV+T+F+CF EDLERN+GS ++PY+++ +L  IL KK   P   K+
Sbjct: 660 SYLIAHGFFSVYAMCVETIFICFCEDLERNDGSTEKPYFVTPNLHGILIKKQLVPQKQKE 719


>gi|18034692 CDW92 antigen [Homo sapiens]
          Length = 657

 Score =  250 bits (639), Expect = 3e-66
 Identities = 197/699 (28%), Positives = 328/699 (46%), Gaps = 109/699 (15%)

Query: 26  PIKNRSCTDVICCVLFLLFILGYIVVGIVAWLYGDPRQVLYPRNSTGAYCGMGENK---- 81
           P+++RSCTD+   +LF+LF +G   +   +   G   +++   +S G  CG    K    
Sbjct: 20  PLEDRSCTDIPWLLLFILFCIGMGFICGFSIATGAAARLVSGYDSYGNICGQKNTKLEAI 79

Query: 82  --------DKPYLLYFNIFSC-ILSSNIISVAENGLQCPTPQVCVSSCPEDPWTVGKN-- 130
                    + Y+ + +  +  +++  I SVA          +CV++CP        +  
Sbjct: 80  PNSGMDHTQRKYVFFLDPCNLDLINRKIKSVA----------LCVAACPRQELKTLSDVQ 129

Query: 131 EFSQTVGEVFYTKNRNFCLPGVPWNMTVITSLQQELCPSFLLPSA---PALGRCFPWTNV 187
           +F++  G    + N        P   T  +     LCP   +P++   P   RC P    
Sbjct: 130 KFAEINGSALCSYNLK------PSEYTT-SPKSSVLCPKLPVPASAPIPFFHRCAP---- 178

Query: 188 TPPALPGITNDTTIQQGISGLIDSLNARDISVKIFEDFAQSWYWILVALGVALVLSLLFI 247
                    N +   +    LI  ++   +  ++      S   IL    ++LVLS++ +
Sbjct: 179 --------VNISCYAKFAEALITFVSDNSVLHRLISGVMTSKEIILGLCLLSLVLSMILM 230

Query: 248 LLLRLVAGPLVLVL-ILGVLGVLAYGIYYCWEEYRVLRDKGASISQLGFTTNLSAYQSVQ 306
           +++R ++  LV +L IL +LG L  G    W  Y   R            T       + 
Sbjct: 231 VIIRYISRVLVWILTILVILGSLG-GTGVLWWLYAKQRRSPKE-------TVTPEQLQIA 282

Query: 307 ETWLAALIVLA----VLEAILLLMLIFLRQRIRIAIALLKEASKAVGQMMSTMFYPLVTF 362
           E  L AL++ A    V   IL L+++ +R+R+ + IAL   A K    +   +F P  TF
Sbjct: 283 EDNLRALLIYAISATVFTVILFLIMLVMRKRVALTIALFHVAGKVFIHLPLLVFQPFWTF 342

Query: 363 VLLLICIAYWAMTALYLATSGQPQYVLWASNISSPGCEKVPINTSCNPTAHLVNSSCPGL 422
             L++   YW MT L+L T+G P         +  G                        
Sbjct: 343 FALVLFWVYWIMTLLFLGTTGSPVQ-------NEQG------------------------ 371

Query: 423 MCVFQGYSSKGLIQRSVFNLQIYGVLGLFWTLNWVLALGQCVLAGAFASFYWAFHKPQDI 482
              F  +   G +Q   +    Y V+GL W   ++LA  Q  +AGA  ++Y+   K +++
Sbjct: 372 ---FVEFKISGPLQYMWW----YHVVGLIWISEFILACQQMTVAGAVVTYYFTRDK-RNL 423

Query: 483 PTFPLISAFIRTLRYHTGSLAFGALILTLVQIARVILEYIDHKLRGVQNPVARCIMCCFK 542
           P  P++++  R +RYH G++A G+ I+TLV+I R+IL YI  +L+G +N  ARC++    
Sbjct: 424 PFTPILASVNRLIRYHLGTVAKGSFIITLVKIPRMILMYIHSQLKGKENACARCVLKSCI 483

Query: 543 CCLWCLEKFIKFLNRNAYIMIAIYGKNFCVSAKNAFMLLMRNIVRVVVLDKVTDLLLFFG 602
           CCLWCLEK + +LN+NAY   AI   NFC SAK+AF++L+ N +RV  ++ V D +LF G
Sbjct: 484 CCLWCLEKCLNYLNQNAYTATAINSTNFCTSAKDAFVILVENALRVATINTVGDFMLFLG 543

Query: 603 KLLVVGGVGVLSFFFFSGRIPGLGKDFKSPHLNYYWLPIMTSILGAYVIASGFFSVFGMC 662
           K+L+V   G+      + +     +D+       + LP++   L A+++A  F S++ M 
Sbjct: 544 KVLIVCSTGLAGIMLLNYQ-----QDY-----TVWVLPLIIVCLFAFLVAHCFLSIYEMV 593

Query: 663 VDTLFLCFLEDLERNNGSLDRPYYMSKSLLKILGKKNEA 701
           VD LFLCF  D + N+GS  R +YM K L++ +    +A
Sbjct: 594 VDVLFLCFAIDTKYNDGSPGREFYMDKVLMEFVENSRKA 632


>gi|166235173 solute carrier family 44, member 3 isoform 1 [Homo
           sapiens]
          Length = 653

 Score =  218 bits (556), Expect = 1e-56
 Identities = 180/683 (26%), Positives = 303/683 (44%), Gaps = 94/683 (13%)

Query: 30  RSCTDVICCVLFLLFILGYIVVGIVAWLYGDPRQVLYPRNSTGAYCGMGENKDKPYLLY- 88
           R CTD     LF LF  G + +   + + G   ++L+  +S G  CG   +  +   L  
Sbjct: 27  RKCTDTAWLFLFFLFWTGLVFIMGYSVVAGAAGRLLFGYDSFGNMCGKKNSPVEGAPLSG 86

Query: 89  --FNIFSCILSSNIISVAENGLQCPTPQVCVSSCPEDPWTVGKNE--FSQTVGEVFYTKN 144
               +   +   N  ++   G Q     +CVS+CPE+     +    F+ T G      +
Sbjct: 87  QDMTLKKHVFFMNSCNLEVKGTQLNRMALCVSNCPEEQLDSLEEVQFFANTSGSFLCVYS 146

Query: 145 RNFCLPGVPWNMTVITSLQQELCPSFLLP---SAPALGRCFPWTNVTPPALPGIT-NDT- 199
            N       +N T  +     LCP   +P   S P   RC P T         +  ND  
Sbjct: 147 LN------SFNYTH-SPKADSLCPRLPVPPSKSFPLFNRCVPQTPECYSLFASVLINDVD 199

Query: 200 TIQQGISGLIDSLNARDISVKIFEDFAQSWYWILVALGVALVLSLLFILLLRLVAGPLVL 259
           T+ + +SG+   ++ RD  + +           ++AL ++L +   F  +  L+    + 
Sbjct: 200 TLHRILSGI---MSGRDTILGL----------CILALALSLAMMFTFRFITTLLVHIFIS 246

Query: 260 VLILGVLGVLAYGIYYCWEEYRVLRDKGASISQLGFTTNLSAYQSVQETWLAALIVLAVL 319
           ++ILG+L V   G+ + W  Y    D          +  L   +   +  L   IV   +
Sbjct: 247 LVILGLLFVC--GVLW-WLYYDYTND---------LSIELDTERENMKCVLGFAIVSTGI 294

Query: 320 EAILLLMLIFLRQRIRIAIALLKEASKAVGQMMSTMFYPLVTFVLLLICIAYWAMTALYL 379
            A+LL+++  LR+RI++ + L +  +KA+      +F PL TF +L+     W    L L
Sbjct: 295 TAVLLVLIFVLRKRIKLTVELFQITNKAISSAPFLLFQPLWTFAILIFFWVLWVAVLLSL 354

Query: 380 ATSGQPQYVLWASNISSPGCEKVPINTSCNPTAHLVNSSCPGLMCVFQGYSSKGLIQRSV 439
            T+G  Q                                      V +G   +      +
Sbjct: 355 GTAGAAQ--------------------------------------VMEGGQVEYKPLSGI 376

Query: 440 FNLQIYGVLGLFWTLNWVLALGQCVLAGAFASFYWAFHKPQDIPTFPLISAFIRTLRYHT 499
             +  Y ++GL WT  ++LA  Q  +AGA  + Y+   K  D P  P++S+      YH 
Sbjct: 377 RYMWSYHLIGLIWTSEFILACQQMTIAGAVVTCYFNRSK-NDPPDHPILSSLSILFFYHQ 435

Query: 500 GSLAFGALILTLVQIARVILEYIDHKLRGVQN-PVARCIMCCFKCCLWCLEKFIKFLNRN 558
           G++  G+ ++++V+I R+I+ Y+ + L+  Q+  ++R +  C  CC WCL+K++  LN+N
Sbjct: 436 GTVVKGSFLISVVRIPRIIVMYMQNALKEQQHGALSRYLFRCCYCCFWCLDKYLLHLNQN 495

Query: 559 AYIMIAIYGKNFCVSAKNAFMLLMRNIVRVVVLDKVTDLLLFFGKLLVVGGVGVLSFFFF 618
           AY   AI G +FC SAK+AF +L +N      ++   D ++F GK+LVV       F  F
Sbjct: 496 AYTTTAINGTDFCTSAKDAFKILSKNSSHFTSINCFGDFIIFLGKVLVV------CFTVF 549

Query: 619 SGRIPGLGKDFKSPHLNYYW-LPIMTSILGAYVIASGFFSVFGMCVDTLFLCFLEDLERN 677
            G +      F        W +P++     AY++A  F SVF   +D LFLCF  DLE N
Sbjct: 550 GGLMA-----FNYNRAFQVWAVPLLLVAFFAYLVAHSFLSVFETVLDALFLCFAVDLETN 604

Query: 678 NGSLDRPYYMSKSLLKILGKKNE 700
           +GS ++PY+M +  L  + + N+
Sbjct: 605 DGSSEKPYFMDQEFLSFVKRSNK 627


>gi|166235171 solute carrier family 44, member 3 isoform 2 [Homo
           sapiens]
          Length = 605

 Score =  206 bits (525), Expect = 5e-53
 Identities = 175/667 (26%), Positives = 295/667 (44%), Gaps = 100/667 (14%)

Query: 46  LGYIVVGIVAWLYGDPRQVLYPRNSTGAYCGMGENKDKPYLLY---FNIFSCILSSNIIS 102
           +GY VV       G   ++L+  +S G  CG   +  +   L      +   +   N  +
Sbjct: 1   MGYSVVA------GAAGRLLFGYDSFGNMCGKKNSPVEGAPLSGQDMTLKKHVFFMNSCN 54

Query: 103 VAENGLQCPTPQVCVSSCPEDPWTVGKNE--FSQTVGEVFYTKNRNFCLPGVPWNMTVIT 160
           +   G Q     +CVS+CPE+     +    F+ T G      + N       +N T  +
Sbjct: 55  LEVKGTQLNRMALCVSNCPEEQLDSLEEVQFFANTSGSFLCVYSLN------SFNYTH-S 107

Query: 161 SLQQELCPSFLLP---SAPALGRCFPWTNVTPPALPGIT-NDT-TIQQGISGLIDSLNAR 215
                LCP   +P   S P   RC P T         +  ND  T+ + +SG+   ++ R
Sbjct: 108 PKADSLCPRLPVPPSKSFPLFNRCVPQTPECYSLFASVLINDVDTLHRILSGI---MSGR 164

Query: 216 DISVKIFEDFAQSWYWILVALGVALVLSLLFILLLRLVAGPLVLVLILGVLGVLAYGIYY 275
           D  + +           ++AL ++L +   F  +  L+    + ++ILG+L V   G+ +
Sbjct: 165 DTILGL----------CILALALSLAMMFTFRFITTLLVHIFISLVILGLLFVC--GVLW 212

Query: 276 CWEEYRVLRDKGASISQLGFTTNLSAYQSVQETWLAALIVLAVLEAILLLMLIFLRQRIR 335
            W  Y    D          +  L   +   +  L   IV   + A+LL+++  LR+RI+
Sbjct: 213 -WLYYDYTND---------LSIELDTERENMKCVLGFAIVSTGITAVLLVLIFVLRKRIK 262

Query: 336 IAIALLKEASKAVGQMMSTMFYPLVTFVLLLICIAYWAMTALYLATSGQPQYVLWASNIS 395
           + + L +  +KA+      +F PL TF +L+     W    L L T+G  Q         
Sbjct: 263 LTVELFQITNKAISSAPFLLFQPLWTFAILIFFWVLWVAVLLSLGTAGAAQ--------- 313

Query: 396 SPGCEKVPINTSCNPTAHLVNSSCPGLMCVFQGYSSKGLIQRSVFNLQIYGVLGLFWTLN 455
                                        V +G   +      +  +  Y ++GL WT  
Sbjct: 314 -----------------------------VMEGGQVEYKPLSGIRYMWSYHLIGLIWTSE 344

Query: 456 WVLALGQCVLAGAFASFYWAFHKPQDIPTFPLISAFIRTLRYHTGSLAFGALILTLVQIA 515
           ++LA  Q  +AGA  + Y+   K  D P  P++S+      YH G++  G+ ++++V+I 
Sbjct: 345 FILACQQMTIAGAVVTCYFNRSK-NDPPDHPILSSLSILFFYHQGTVVKGSFLISVVRIP 403

Query: 516 RVILEYIDHKLRGVQN-PVARCIMCCFKCCLWCLEKFIKFLNRNAYIMIAIYGKNFCVSA 574
           R+I+ Y+ + L+  Q+  ++R +  C  CC WCL+K++  LN+NAY   AI G +FC SA
Sbjct: 404 RIIVMYMQNALKEQQHGALSRYLFRCCYCCFWCLDKYLLHLNQNAYTTTAINGTDFCTSA 463

Query: 575 KNAFMLLMRNIVRVVVLDKVTDLLLFFGKLLVVGGVGVLSFFFFSGRIPGLGKDFKSPHL 634
           K+AF +L +N      ++   D ++F GK+LVV       F  F G +      F     
Sbjct: 464 KDAFKILSKNSSHFTSINCFGDFIIFLGKVLVV------CFTVFGGLMA-----FNYNRA 512

Query: 635 NYYW-LPIMTSILGAYVIASGFFSVFGMCVDTLFLCFLEDLERNNGSLDRPYYMSKSLLK 693
              W +P++     AY++A  F SVF   +D LFLCF  DLE N+GS ++PY+M +  L 
Sbjct: 513 FQVWAVPLLLVAFFAYLVAHSFLSVFETVLDALFLCFAVDLETNDGSSEKPYFMDQEFLS 572

Query: 694 ILGKKNE 700
            + + N+
Sbjct: 573 FVKRSNK 579


>gi|21264580 tetraspan 2 [Homo sapiens]
          Length = 221

 Score = 36.2 bits (82), Expect = 0.11
 Identities = 30/84 (35%), Positives = 39/84 (46%), Gaps = 10/84 (11%)

Query: 597 LLLFFGKLLVVGGVGVLSF---FFFSGRIPGLGKDFKSPHLNYYWLPIMTSILGAYVIAS 653
           LLL F  L  + G  V++F   F F G I  L  + KSP   Y  L ++    GA ++A 
Sbjct: 14  LLLGFNLLFWLAGSAVIAFGLWFRFGGAIKELSSEDKSPEYFYVGLYVLVG-AGALMMAV 72

Query: 654 GFFSVFG-----MCV-DTLFLCFL 671
           GFF   G      CV  + F C L
Sbjct: 73  GFFGCCGAMRESQCVLGSFFTCLL 96


>gi|4502827 cholinergic receptor, nicotinic, alpha 4 subunit
           precursor [Homo sapiens]
          Length = 627

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 20/101 (19%)

Query: 168 PSFLLPSAPALGRCFPWTNVTPPALPGITNDTTIQQGISGLIDSLNARDISVKIFEDFAQ 227
           PS + PSA    R    T   PP LP     T   +G+  + D L A D    + ED   
Sbjct: 537 PSSVSPSATVKTRS---TKAPPPHLPLSPALTRAVEGVQYIADHLKAEDTDFSVKED--- 590

Query: 228 SWYWILVALGVALVLSLLFILLLRLVAGPLVLVLILGVLGV 268
            W +      VA+V+  +F+ +        ++V +LG +G+
Sbjct: 591 -WKY------VAMVIDRIFLWM-------FIIVCLLGTVGL 617


>gi|157388902 semaphorin 4C [Homo sapiens]
          Length = 833

 Score = 32.3 bits (72), Expect = 1.6
 Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 23/99 (23%)

Query: 272 GIYYCWEEYRVLRDKGASISQLGFTTNLSAYQSVQE-----------TWLAALIVLAVLE 320
           G Y+C+ E     ++GA ++  G+   + A  SV              WLA ++ L  + 
Sbjct: 623 GAYHCFSE-----EQGARLAAEGYLVAVVAGPSVTLEARAPLENLGLVWLA-VVALGAVC 676

Query: 321 AILLLMLIFLRQRIRIAIALLKEASKAVGQMMSTMFYPL 359
            +LLL+++ LR+R+R      +E  K       T+ YPL
Sbjct: 677 LVLLLLVLSLRRRLR------EELEKGAKATERTLVYPL 709


>gi|4502187 aquaporin 7 [Homo sapiens]
          Length = 342

 Score = 30.4 bits (67), Expect = 5.9
 Identities = 12/29 (41%), Positives = 19/29 (65%)

Query: 622 IPGLGKDFKSPHLNYYWLPIMTSILGAYV 650
           I G GK   S   N++W+P++  +LGAY+
Sbjct: 239 IAGWGKQVFSNGENWWWVPVVAPLLGAYL 267


>gi|21729876 ATP-binding cassette, sub-family C, member 11 isoform b
           [Homo sapiens]
          Length = 1344

 Score = 30.0 bits (66), Expect = 7.7
 Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 1/72 (1%)

Query: 25  GPIKNRSCTDVICCVLFLLFILGYIV-VGIVAWLYGDPRQVLYPRNSTGAYCGMGENKDK 83
           GP+   +C  ++ C +   FI+GY   + I+ +L   P  V   R +  A     E  D+
Sbjct: 278 GPLVLITCASLVICSISSYFIIGYTAFIAILCYLLVFPLAVFMTRMAVKAQHHTSEVSDQ 337

Query: 84  PYLLYFNIFSCI 95
              +   + +CI
Sbjct: 338 RIRVTSEVLTCI 349


>gi|21729873 ATP-binding cassette, sub-family C, member 11 isoform a
           [Homo sapiens]
          Length = 1382

 Score = 30.0 bits (66), Expect = 7.7
 Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 1/72 (1%)

Query: 25  GPIKNRSCTDVICCVLFLLFILGYIV-VGIVAWLYGDPRQVLYPRNSTGAYCGMGENKDK 83
           GP+   +C  ++ C +   FI+GY   + I+ +L   P  V   R +  A     E  D+
Sbjct: 278 GPLVLITCASLVICSISSYFIIGYTAFIAILCYLLVFPLAVFMTRMAVKAQHHTSEVSDQ 337

Query: 84  PYLLYFNIFSCI 95
              +   + +CI
Sbjct: 338 RIRVTSEVLTCI 349


>gi|15149474 ATP-binding cassette, sub-family C, member 11 isoform a
           [Homo sapiens]
          Length = 1382

 Score = 30.0 bits (66), Expect = 7.7
 Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 1/72 (1%)

Query: 25  GPIKNRSCTDVICCVLFLLFILGYIV-VGIVAWLYGDPRQVLYPRNSTGAYCGMGENKDK 83
           GP+   +C  ++ C +   FI+GY   + I+ +L   P  V   R +  A     E  D+
Sbjct: 278 GPLVLITCASLVICSISSYFIIGYTAFIAILCYLLVFPLAVFMTRMAVKAQHHTSEVSDQ 337

Query: 84  PYLLYFNIFSCI 95
              +   + +CI
Sbjct: 338 RIRVTSEVLTCI 349


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.328    0.143    0.457 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,699,243
Number of Sequences: 37866
Number of extensions: 1190123
Number of successful extensions: 3956
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 3893
Number of HSP's gapped (non-prelim): 22
length of query: 710
length of database: 18,247,518
effective HSP length: 109
effective length of query: 601
effective length of database: 14,120,124
effective search space: 8486194524
effective search space used: 8486194524
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 66 (30.0 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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