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Search of human proteins with 145966685
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|145966685 TLX1 divergent [Homo sapiens]
(122 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|145966685 TLX1 divergent [Homo sapiens] 266 2e-72
gi|22902136 osterix [Homo sapiens] 35 0.014
gi|195963316 PWWP domain containing 2A isoform b [Homo sapiens] 35 0.018
gi|153791982 PWWP domain containing 2A isoform a [Homo sapiens] 35 0.018
gi|55741675 hypothetical protein LOC22889 [Homo sapiens] 34 0.024
gi|151108509 Rho GTPase-activating protein RICH2 [Homo sapiens] 34 0.024
gi|192807323 SWI/SNF-related matrix-associated actin-dependent r... 33 0.040
gi|192807320 SWI/SNF-related matrix-associated actin-dependent r... 33 0.040
gi|192807318 SWI/SNF-related matrix-associated actin-dependent r... 33 0.040
gi|192807316 SWI/SNF-related matrix-associated actin-dependent r... 33 0.040
gi|192807314 SWI/SNF-related matrix-associated actin-dependent r... 33 0.040
gi|192807312 SWI/SNF-related matrix-associated actin-dependent r... 33 0.040
gi|21071056 SWI/SNF-related matrix-associated actin-dependent re... 33 0.040
gi|38146118 hypothetical protein LOC10712 isoform b [Homo sapiens] 33 0.053
gi|38146116 hypothetical protein LOC10712 isoform a [Homo sapiens] 33 0.053
gi|4758222 dual-specificity tyrosine-(Y)-phosphorylation regulat... 33 0.053
gi|5922001 dual-specificity tyrosine-(Y)-phosphorylation regulat... 33 0.053
gi|5921999 dual-specificity tyrosine-(Y)-phosphorylation regulat... 33 0.053
gi|194239681 tubulin tyrosine ligase-like family, member 10 isof... 33 0.053
gi|157785645 SPEG complex locus [Homo sapiens] 33 0.069
gi|194328809 latent transforming growth factor beta binding prot... 32 0.090
gi|18497288 latent transforming growth factor beta binding prote... 32 0.090
gi|83816964 Holliday junction recognition protein [Homo sapiens] 32 0.090
gi|15826862 coiled-coil domain containing 120 isoform 3 [Homo sa... 32 0.12
gi|254039614 coiled-coil domain containing 120 isoform 4 [Homo s... 32 0.12
gi|254039612 coiled-coil domain containing 120 isoform 2 [Homo s... 32 0.12
gi|254039610 coiled-coil domain containing 120 isoform 1 [Homo s... 32 0.12
gi|194294554 SET binding protein 1 isoform a [Homo sapiens] 32 0.12
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 32 0.12
gi|150170699 kinesin family member 26A [Homo sapiens] 32 0.15
>gi|145966685 TLX1 divergent [Homo sapiens]
Length = 122
Score = 266 bits (681), Expect = 2e-72
Identities = 122/122 (100%), Positives = 122/122 (100%)
Query: 1 MAPLQLLHPWGRRGAWASQHSLLSQEAMGPGEGAEPTPWGYLRAEHWGASPSGAPTLPFA 60
MAPLQLLHPWGRRGAWASQHSLLSQEAMGPGEGAEPTPWGYLRAEHWGASPSGAPTLPFA
Sbjct: 1 MAPLQLLHPWGRRGAWASQHSLLSQEAMGPGEGAEPTPWGYLRAEHWGASPSGAPTLPFA 60
Query: 61 PDECSLTPGSPPHPLNKQKHHPPHPSQTQKDLVPRSPQLEKSRIRLRRTLRNLGGGRGQR 120
PDECSLTPGSPPHPLNKQKHHPPHPSQTQKDLVPRSPQLEKSRIRLRRTLRNLGGGRGQR
Sbjct: 61 PDECSLTPGSPPHPLNKQKHHPPHPSQTQKDLVPRSPQLEKSRIRLRRTLRNLGGGRGQR 120
Query: 121 GQ 122
GQ
Sbjct: 121 GQ 122
>gi|22902136 osterix [Homo sapiens]
Length = 431
Score = 35.0 bits (79), Expect = 0.014
Identities = 36/131 (27%), Positives = 49/131 (37%), Gaps = 21/131 (16%)
Query: 4 LQLLHPWGRRGAW--ASQHSLLSQEAMGPGEGAEPTPWGYLR-AEHW-----GASPSGAP 55
L + HP+G +W A H+ +S PG G PTPW + +W G
Sbjct: 129 LDMTHPYG---SWYKAGIHAGIS-----PGPGNTPTPWWDMHPGGNWLGGGQGQGDGLQG 180
Query: 56 TLPFAPDECSLTPGSPPH-----PLNKQKHHPPHPSQTQKDLVPRSPQLEKSRIRLRRTL 110
TLP P + L P P + PLN + PH Q V + + L
Sbjct: 181 TLPTGPAQPPLNPQLPTYPSDFAPLNPAPYPAPHLLQPGPQHVLPQDVYKPKAVGNSGQL 240
Query: 111 RNLGGGRGQRG 121
GG + RG
Sbjct: 241 EGSGGAKPPRG 251
>gi|195963316 PWWP domain containing 2A isoform b [Homo sapiens]
Length = 755
Score = 34.7 bits (78), Expect = 0.018
Identities = 26/71 (36%), Positives = 33/71 (46%), Gaps = 6/71 (8%)
Query: 24 SQEAMGPGEGAEPTPWGYLRAEHWGASPSGAPTLPFAPDECSLTPGSPPHPLNKQKHHPP 83
S EA+GP AE AE A+P G P LP +P + P PP P +++ PP
Sbjct: 81 SPEAVGPELEAEEK-LSVRVAESAAAAPQGGPELPPSP---ASPPEQPPAP--EEREEPP 134
Query: 84 HPSQTQKDLVP 94
P LVP
Sbjct: 135 LPQPVAPALVP 145
>gi|153791982 PWWP domain containing 2A isoform a [Homo sapiens]
Length = 560
Score = 34.7 bits (78), Expect = 0.018
Identities = 26/71 (36%), Positives = 33/71 (46%), Gaps = 6/71 (8%)
Query: 24 SQEAMGPGEGAEPTPWGYLRAEHWGASPSGAPTLPFAPDECSLTPGSPPHPLNKQKHHPP 83
S EA+GP AE AE A+P G P LP +P + P PP P +++ PP
Sbjct: 81 SPEAVGPELEAEEK-LSVRVAESAAAAPQGGPELPPSP---ASPPEQPPAP--EEREEPP 134
Query: 84 HPSQTQKDLVP 94
P LVP
Sbjct: 135 LPQPVAPALVP 145
>gi|55741675 hypothetical protein LOC22889 [Homo sapiens]
Length = 614
Score = 34.3 bits (77), Expect = 0.024
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
Query: 48 GASPSGAPTLPFAPDECSLTPGSPPHPLNKQKHHPPHPSQTQ 89
G SP G P +P AP + +L G P P + PP PSQ Q
Sbjct: 421 GQSPMGGPFIPAAPVKTALPAGPQPQP----QPQPPLPSQPQ 458
>gi|151108509 Rho GTPase-activating protein RICH2 [Homo sapiens]
Length = 818
Score = 34.3 bits (77), Expect = 0.024
Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 6/104 (5%)
Query: 1 MAPLQLLHPWGRRGAWASQHS-LLSQEAMGPGEGAEPTPWGYLRAEHWGA-----SPSGA 54
+AP+ P+G+ GA A Q + S ++ P + P+P+G + + SP+ A
Sbjct: 651 LAPIPPKVPFGQPGAMADQSAGQPSPVSLSPTPPSTPSPYGLSYPQGYSLASGQLSPAAA 710
Query: 55 PTLPFAPDECSLTPGSPPHPLNKQKHHPPHPSQTQKDLVPRSPQ 98
P L S S P P +Q+ P P +L SPQ
Sbjct: 711 PPLASPSVFTSTLSKSRPTPKPRQRPTLPPPQPPTVNLSASSPQ 754
>gi|192807323 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform A [Homo sapiens]
Length = 1679
Score = 33.5 bits (75), Expect = 0.040
Identities = 25/76 (32%), Positives = 31/76 (40%), Gaps = 12/76 (15%)
Query: 29 GPGEGAEPTPWGYLRAEHWGA------SPSGAPTLPFAPDECSLTPGSPPHPLNK-QKHH 81
GPG G P P Y R G PSG P P P + PG PP P + +
Sbjct: 237 GPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVP--PGMPGQ---PPGGPPKPWPEGPMAN 291
Query: 82 PPHPSQTQKDLVPRSP 97
P+ T + L+P P
Sbjct: 292 AAAPTSTPQKLIPPQP 307
>gi|192807320 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform F [Homo sapiens]
Length = 1613
Score = 33.5 bits (75), Expect = 0.040
Identities = 25/76 (32%), Positives = 31/76 (40%), Gaps = 12/76 (15%)
Query: 29 GPGEGAEPTPWGYLRAEHWGA------SPSGAPTLPFAPDECSLTPGSPPHPLNK-QKHH 81
GPG G P P Y R G PSG P P P + PG PP P + +
Sbjct: 237 GPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVP--PGMPGQ---PPGGPPKPWPEGPMAN 291
Query: 82 PPHPSQTQKDLVPRSP 97
P+ T + L+P P
Sbjct: 292 AAAPTSTPQKLIPPQP 307
>gi|192807318 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform E [Homo sapiens]
Length = 1614
Score = 33.5 bits (75), Expect = 0.040
Identities = 25/76 (32%), Positives = 31/76 (40%), Gaps = 12/76 (15%)
Query: 29 GPGEGAEPTPWGYLRAEHWGA------SPSGAPTLPFAPDECSLTPGSPPHPLNK-QKHH 81
GPG G P P Y R G PSG P P P + PG PP P + +
Sbjct: 237 GPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVP--PGMPGQ---PPGGPPKPWPEGPMAN 291
Query: 82 PPHPSQTQKDLVPRSP 97
P+ T + L+P P
Sbjct: 292 AAAPTSTPQKLIPPQP 307
>gi|192807316 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform D [Homo sapiens]
Length = 1616
Score = 33.5 bits (75), Expect = 0.040
Identities = 25/76 (32%), Positives = 31/76 (40%), Gaps = 12/76 (15%)
Query: 29 GPGEGAEPTPWGYLRAEHWGA------SPSGAPTLPFAPDECSLTPGSPPHPLNK-QKHH 81
GPG G P P Y R G PSG P P P + PG PP P + +
Sbjct: 237 GPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVP--PGMPGQ---PPGGPPKPWPEGPMAN 291
Query: 82 PPHPSQTQKDLVPRSP 97
P+ T + L+P P
Sbjct: 292 AAAPTSTPQKLIPPQP 307
>gi|192807314 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform C [Homo sapiens]
Length = 1617
Score = 33.5 bits (75), Expect = 0.040
Identities = 25/76 (32%), Positives = 31/76 (40%), Gaps = 12/76 (15%)
Query: 29 GPGEGAEPTPWGYLRAEHWGA------SPSGAPTLPFAPDECSLTPGSPPHPLNK-QKHH 81
GPG G P P Y R G PSG P P P + PG PP P + +
Sbjct: 237 GPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVP--PGMPGQ---PPGGPPKPWPEGPMAN 291
Query: 82 PPHPSQTQKDLVPRSP 97
P+ T + L+P P
Sbjct: 292 AAAPTSTPQKLIPPQP 307
>gi|192807312 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform B [Homo sapiens]
Length = 1647
Score = 33.5 bits (75), Expect = 0.040
Identities = 25/76 (32%), Positives = 31/76 (40%), Gaps = 12/76 (15%)
Query: 29 GPGEGAEPTPWGYLRAEHWGA------SPSGAPTLPFAPDECSLTPGSPPHPLNK-QKHH 81
GPG G P P Y R G PSG P P P + PG PP P + +
Sbjct: 237 GPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVP--PGMPGQ---PPGGPPKPWPEGPMAN 291
Query: 82 PPHPSQTQKDLVPRSP 97
P+ T + L+P P
Sbjct: 292 AAAPTSTPQKLIPPQP 307
>gi|21071056 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform B [Homo sapiens]
Length = 1647
Score = 33.5 bits (75), Expect = 0.040
Identities = 25/76 (32%), Positives = 31/76 (40%), Gaps = 12/76 (15%)
Query: 29 GPGEGAEPTPWGYLRAEHWGA------SPSGAPTLPFAPDECSLTPGSPPHPLNK-QKHH 81
GPG G P P Y R G PSG P P P + PG PP P + +
Sbjct: 237 GPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVP--PGMPGQ---PPGGPPKPWPEGPMAN 291
Query: 82 PPHPSQTQKDLVPRSP 97
P+ T + L+P P
Sbjct: 292 AAAPTSTPQKLIPPQP 307
>gi|38146118 hypothetical protein LOC10712 isoform b [Homo sapiens]
Length = 572
Score = 33.1 bits (74), Expect = 0.053
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 9/48 (18%)
Query: 49 ASPSGAPTLPFAPDECSLTPGSPPHPLNKQKHHPPHPSQTQKDLVPRS 96
A P+ APT F+ SLTP H PPHP+ L+PRS
Sbjct: 357 APPTRAPTRRFSDSSGSLTPPG---------HRPPHPASPPPLLLPRS 395
>gi|38146116 hypothetical protein LOC10712 isoform a [Homo sapiens]
Length = 668
Score = 33.1 bits (74), Expect = 0.053
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 9/48 (18%)
Query: 49 ASPSGAPTLPFAPDECSLTPGSPPHPLNKQKHHPPHPSQTQKDLVPRS 96
A P+ APT F+ SLTP H PPHP+ L+PRS
Sbjct: 453 APPTRAPTRRFSDSSGSLTPPG---------HRPPHPASPPPLLLPRS 491
>gi|4758222 dual-specificity tyrosine-(Y)-phosphorylation regulated
kinase 1B isoform a [Homo sapiens]
Length = 629
Score = 33.1 bits (74), Expect = 0.053
Identities = 27/84 (32%), Positives = 35/84 (41%), Gaps = 12/84 (14%)
Query: 3 PLQLLHPWGRRGAWASQHSLLSQEAMGPGEGAEPTPWGYLRAEHWGASPSGAPTLPFAPD 62
P Q L PW H + + PG GA+ P + + G PS PT P P+
Sbjct: 509 PSQPLRPWAGGDVPHKTHQAPASASSLPGTGAQLPP----QPRYLGRPPS--PTSPPPPE 562
Query: 63 --ECSLTPG----SPPHPLNKQKH 80
+ SL G SPPHP +H
Sbjct: 563 LMDVSLVGGPADCSPPHPAPAPQH 586
>gi|5922001 dual-specificity tyrosine-(Y)-phosphorylation regulated
kinase 1B isoform c [Homo sapiens]
Length = 601
Score = 33.1 bits (74), Expect = 0.053
Identities = 27/84 (32%), Positives = 35/84 (41%), Gaps = 12/84 (14%)
Query: 3 PLQLLHPWGRRGAWASQHSLLSQEAMGPGEGAEPTPWGYLRAEHWGASPSGAPTLPFAPD 62
P Q L PW H + + PG GA+ P + + G PS PT P P+
Sbjct: 481 PSQPLRPWAGGDVPHKTHQAPASASSLPGTGAQLPP----QPRYLGRPPS--PTSPPPPE 534
Query: 63 --ECSLTPG----SPPHPLNKQKH 80
+ SL G SPPHP +H
Sbjct: 535 LMDVSLVGGPADCSPPHPAPAPQH 558
>gi|5921999 dual-specificity tyrosine-(Y)-phosphorylation regulated
kinase 1B isoform b [Homo sapiens]
Length = 589
Score = 33.1 bits (74), Expect = 0.053
Identities = 27/84 (32%), Positives = 35/84 (41%), Gaps = 12/84 (14%)
Query: 3 PLQLLHPWGRRGAWASQHSLLSQEAMGPGEGAEPTPWGYLRAEHWGASPSGAPTLPFAPD 62
P Q L PW H + + PG GA+ P + + G PS PT P P+
Sbjct: 469 PSQPLRPWAGGDVPHKTHQAPASASSLPGTGAQLPP----QPRYLGRPPS--PTSPPPPE 522
Query: 63 --ECSLTPG----SPPHPLNKQKH 80
+ SL G SPPHP +H
Sbjct: 523 LMDVSLVGGPADCSPPHPAPAPQH 546
>gi|194239681 tubulin tyrosine ligase-like family, member 10 isoform
1 [Homo sapiens]
Length = 673
Score = 33.1 bits (74), Expect = 0.053
Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 9/77 (11%)
Query: 34 AEPTPW--GYLRAEHWGASP-----SGAPTLPFAPDECSLTPGSPPHPLNKQKHHPPHPS 86
A+P P G W P S P +P APD+ +PP PL Q+ PP P
Sbjct: 570 ADPRPHLGGSCSLRRWPPLPTRQAKSSGPPMPHAPDQPGARRPAPP-PLVPQRPRPPGPD 628
Query: 87 -QTQKDLVPRSPQLEKS 102
+ D P++P E+S
Sbjct: 629 LDSAHDGEPQAPGTEQS 645
>gi|157785645 SPEG complex locus [Homo sapiens]
Length = 3267
Score = 32.7 bits (73), Expect = 0.069
Identities = 30/101 (29%), Positives = 38/101 (37%), Gaps = 8/101 (7%)
Query: 2 APLQLLHPWGRRGAWASQHS-----LLSQEAMGPGEGAEPTPWGYLRAEHWGASPSGAPT 56
APL++ P R GA Q S L + P + P P AE +PS AP
Sbjct: 2147 APLEI--PVARLGARRLQESPSLSALSEAQPSSPARPSAPKPSTPKSAEPSATTPSDAPQ 2204
Query: 57 LPFAPDECSLTPGSPPHPLNKQKHHPPHPSQTQKDLVPRSP 97
P P P P+ K PP P Q +P +P
Sbjct: 2205 PPAPQPAQDKAPEPRPEPVRASKPAPP-PQALQTLALPLTP 2244
>gi|194328809 latent transforming growth factor beta binding protein
3 isoform 1 [Homo sapiens]
Length = 1303
Score = 32.3 bits (72), Expect = 0.090
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 18/74 (24%)
Query: 17 ASQHSLLSQEAM----GPGEGAEPTPWGYLRAEHWGASPSGAPTLPFAPDECSLTPGSPP 72
AS+H++ + + + GPGEG A+H A +P P + S +PP
Sbjct: 180 ASKHAIYAVQVIADPPGPGEGPP--------AQH------AAFLVPLGPGQISAEVQAPP 225
Query: 73 HPLNKQKHHPPHPS 86
+N + HHPP S
Sbjct: 226 PVVNVRVHHPPEAS 239
>gi|18497288 latent transforming growth factor beta binding protein
3 isoform 2 [Homo sapiens]
Length = 1256
Score = 32.3 bits (72), Expect = 0.090
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 18/74 (24%)
Query: 17 ASQHSLLSQEAM----GPGEGAEPTPWGYLRAEHWGASPSGAPTLPFAPDECSLTPGSPP 72
AS+H++ + + + GPGEG A+H A +P P + S +PP
Sbjct: 180 ASKHAIYAVQVIADPPGPGEGPP--------AQH------AAFLVPLGPGQISAEVQAPP 225
Query: 73 HPLNKQKHHPPHPS 86
+N + HHPP S
Sbjct: 226 PVVNVRVHHPPEAS 239
>gi|83816964 Holliday junction recognition protein [Homo sapiens]
Length = 748
Score = 32.3 bits (72), Expect = 0.090
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 6/51 (11%)
Query: 54 APTLPFAPDECSL----TPGSPPHPLNKQKHHPP-HPSQTQKDLVPRSPQL 99
+P +P AP CS +PG P P + + P HPS T LVPR+ L
Sbjct: 185 SPAVP-APGYCSRISRKSPGDPAKPASSPREWDPLHPSSTDMALVPRNDSL 234
>gi|15826862 coiled-coil domain containing 120 isoform 3 [Homo
sapiens]
Length = 630
Score = 32.0 bits (71), Expect = 0.12
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 5/39 (12%)
Query: 61 PDECSLTPGSPPH-----PLNKQKHHPPHPSQTQKDLVP 94
P EC L PG P P + + PPHP+Q L P
Sbjct: 68 PPECPLEPGERPQLVRRRPPTARAYPPPHPNQAHHSLCP 106
>gi|254039614 coiled-coil domain containing 120 isoform 4 [Homo
sapiens]
Length = 618
Score = 32.0 bits (71), Expect = 0.12
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 5/39 (12%)
Query: 61 PDECSLTPGSPPH-----PLNKQKHHPPHPSQTQKDLVP 94
P EC L PG P P + + PPHP+Q L P
Sbjct: 56 PPECPLEPGERPQLVRRRPPTARAYPPPHPNQAHHSLCP 94
>gi|254039612 coiled-coil domain containing 120 isoform 2 [Homo
sapiens]
Length = 649
Score = 32.0 bits (71), Expect = 0.12
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 5/39 (12%)
Query: 61 PDECSLTPGSPPH-----PLNKQKHHPPHPSQTQKDLVP 94
P EC L PG P P + + PPHP+Q L P
Sbjct: 56 PPECPLEPGERPQLVRRRPPTARAYPPPHPNQAHHSLCP 94
>gi|254039610 coiled-coil domain containing 120 isoform 1 [Homo
sapiens]
Length = 661
Score = 32.0 bits (71), Expect = 0.12
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 5/39 (12%)
Query: 61 PDECSLTPGSPPH-----PLNKQKHHPPHPSQTQKDLVP 94
P EC L PG P P + + PPHP+Q L P
Sbjct: 68 PPECPLEPGERPQLVRRRPPTARAYPPPHPNQAHHSLCP 106
>gi|194294554 SET binding protein 1 isoform a [Homo sapiens]
Length = 1596
Score = 32.0 bits (71), Expect = 0.12
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 10/70 (14%)
Query: 51 PSGAPTLPFAPDECSLTPGSPPHPL------NKQKHHPPHPSQTQKDLVPRSPQLEKSRI 104
P P LP P P PP PL K+KH P P+Q + P+ P ++ +
Sbjct: 1524 PPPPPPLPPPPPP----PLPPPPPLPKTPRGGKRKHKPQAPAQPPQQSPPQQPLPQEEEV 1579
Query: 105 RLRRTLRNLG 114
+ +R ++ G
Sbjct: 1580 KAKRQRKSRG 1589
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 32.0 bits (71), Expect = 0.12
Identities = 22/69 (31%), Positives = 26/69 (37%), Gaps = 3/69 (4%)
Query: 30 PGEGAEPTPWGYLRAEHWGASPSGAPTLPFAPDECSLTPGSPPHPLNKQKHHPPHPSQTQ 89
PG+ P P G ++ SP G P P P + P PP P P P Q
Sbjct: 342 PGKPQGPPPQGGSKSRS-ARSPPGKPQGP--PQQEGNNPQGPPPPAGGNPQQPQAPPAGQ 398
Query: 90 KDLVPRSPQ 98
PR PQ
Sbjct: 399 PQGPPRPPQ 407
Score = 26.6 bits (57), Expect = 4.9
Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 10/68 (14%)
Query: 30 PGEGAEPTPWGYLRAEHWGASPSGAPTLPFAPDECSLTP--------GSPPHPLNKQKHH 81
PG+ P P G + + G P G P P + S +P G PP N+ +
Sbjct: 75 PGKPQGPPPQGGNKPQ--GPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGP 132
Query: 82 PPHPSQTQ 89
PP P + Q
Sbjct: 133 PPPPGKPQ 140
>gi|150170699 kinesin family member 26A [Homo sapiens]
Length = 1882
Score = 31.6 bits (70), Expect = 0.15
Identities = 25/101 (24%), Positives = 37/101 (36%), Gaps = 17/101 (16%)
Query: 24 SQEAMGPGEGAEPTPWGYLRAEHWGASPSGAPTLPFAPDECSLTPGSPPHPLNKQK---- 79
S++ + P G P P G A+P PT + ++ S +PPH +N +
Sbjct: 1342 SKKGLAPKAGFLPRPSG--------AAPPAPPTRKSSLEQRSSPASAPPHAVNPARVGAA 1393
Query: 80 -----HHPPHPSQTQKDLVPRSPQLEKSRIRLRRTLRNLGG 115
P PS VPR+ K+R L G
Sbjct: 1394 AVLRGEEEPRPSSRADHSVPRATSSLKARASKVEAAHRLAG 1434
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.134 0.446
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,150,453
Number of Sequences: 37866
Number of extensions: 453699
Number of successful extensions: 2049
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 234
Number of HSP's that attempted gapping in prelim test: 1838
Number of HSP's gapped (non-prelim): 450
length of query: 122
length of database: 18,247,518
effective HSP length: 89
effective length of query: 33
effective length of database: 14,877,444
effective search space: 490955652
effective search space used: 490955652
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.