Guide to the Human Genome
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Search of human proteins with 145580602

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|145580602 translocation associated membrane protein 1-like 1
[Homo sapiens]
         (369 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|145580602 translocation associated membrane protein 1-like 1 ...   744   0.0  
gi|7657655 translocation associated membrane protein 1 [Homo sap...   539   e-153
gi|6912450 translocation-associated membrane protein 2 [Homo sap...   319   2e-87
gi|205360977 LAG1 homolog, ceramide synthase 4 [Homo sapiens]          55   8e-08
gi|32455256 LAG1 longevity assurance 2 [Homo sapiens]                  45   1e-04
gi|31077094 LAG1 longevity assurance 2 [Homo sapiens]                  45   1e-04
gi|22218345 LAG1 homolog, ceramide synthase 5 [Homo sapiens]           38   0.017
gi|116235446 LAG1 longevity assurance homolog 3 [Homo sapiens]         36   0.063
gi|38176296 LAG1 homolog, ceramide synthase 1 isoform 2 [Homo sa...    31   1.6  
gi|11641421 LAG1 homolog, ceramide synthase 1 isoform 1 [Homo sa...    31   1.6  
gi|6005715 solute carrier family 6 (amino acid transporter), mem...    31   1.6  
gi|31559821 gap junction protein, gamma 3, 30.2kDa [Homo sapiens]      31   2.0  
gi|133925809 inter-alpha (globulin) inhibitor H3 preproprotein [...    30   3.5  
gi|167004078 methyltransferase-like protein 1 isoform a [Homo sa...    29   7.7  
gi|50593008 transmembrane BAX inhibitor motif containing 1 [Homo...    29   7.7  

>gi|145580602 translocation associated membrane protein 1-like 1
           [Homo sapiens]
          Length = 369

 Score =  744 bits (1920), Expect = 0.0
 Identities = 369/369 (100%), Positives = 369/369 (100%)

Query: 1   MGLRKKSTKNPPVLSQEFILQNHADIVSCVGMFFLLGLVFEGTAEASIVFLTLQHSVAVP 60
           MGLRKKSTKNPPVLSQEFILQNHADIVSCVGMFFLLGLVFEGTAEASIVFLTLQHSVAVP
Sbjct: 1   MGLRKKSTKNPPVLSQEFILQNHADIVSCVGMFFLLGLVFEGTAEASIVFLTLQHSVAVP 60

Query: 61  AAEEQATGSKSLYYYGVKDLATVFFYMLVAIIIHATIQEYVLDKINKRMQFTKAKQNKFN 120
           AAEEQATGSKSLYYYGVKDLATVFFYMLVAIIIHATIQEYVLDKINKRMQFTKAKQNKFN
Sbjct: 61  AAEEQATGSKSLYYYGVKDLATVFFYMLVAIIIHATIQEYVLDKINKRMQFTKAKQNKFN 120

Query: 121 ESGQFSVFYFFSCIWGTFILISENCLSDPTLIWKARPHSMMTFQMKFFYISQLAYWFHAF 180
           ESGQFSVFYFFSCIWGTFILISENCLSDPTLIWKARPHSMMTFQMKFFYISQLAYWFHAF
Sbjct: 121 ESGQFSVFYFFSCIWGTFILISENCLSDPTLIWKARPHSMMTFQMKFFYISQLAYWFHAF 180

Query: 181 PELYFQKTKKQDIPRQLVYIGLHLFHITGAYLLYLNHLGLLLLVLHYFVELLSHMCGLFY 240
           PELYFQKTKKQDIPRQLVYIGLHLFHITGAYLLYLNHLGLLLLVLHYFVELLSHMCGLFY
Sbjct: 181 PELYFQKTKKQDIPRQLVYIGLHLFHITGAYLLYLNHLGLLLLVLHYFVELLSHMCGLFY 240

Query: 241 FSDEKYQKGISLWAIVFILGRLVTLIVSVLTVGFHLAGSQNRNPDALTGNVNVLAAKIAV 300
           FSDEKYQKGISLWAIVFILGRLVTLIVSVLTVGFHLAGSQNRNPDALTGNVNVLAAKIAV
Sbjct: 241 FSDEKYQKGISLWAIVFILGRLVTLIVSVLTVGFHLAGSQNRNPDALTGNVNVLAAKIAV 300

Query: 301 LSSSCTIQAYVTWNLITLWLQRWVEDSNIQASCMKKKRSRSSKKRTENGVGVETSNRVDC 360
           LSSSCTIQAYVTWNLITLWLQRWVEDSNIQASCMKKKRSRSSKKRTENGVGVETSNRVDC
Sbjct: 301 LSSSCTIQAYVTWNLITLWLQRWVEDSNIQASCMKKKRSRSSKKRTENGVGVETSNRVDC 360

Query: 361 PPKRKEKSS 369
           PPKRKEKSS
Sbjct: 361 PPKRKEKSS 369


>gi|7657655 translocation associated membrane protein 1 [Homo
           sapiens]
          Length = 374

 Score =  539 bits (1388), Expect = e-153
 Identities = 267/374 (71%), Positives = 311/374 (83%), Gaps = 5/374 (1%)

Query: 1   MGLRKKSTKNPPVLSQEFILQNHADIVSCVGMFFLLGLVFEGTAEASIVFLTLQHSVAVP 60
           M +RKKSTK+PPVLS EF+LQNHADIVSCV M FLLGL+FE TA+ASI+F+TLQ++V +P
Sbjct: 1   MAIRKKSTKSPPVLSHEFVLQNHADIVSCVAMVFLLGLMFEITAKASIIFVTLQYNVTLP 60

Query: 61  AAEEQATGSKSLYYYGVKDLATVFFYMLVAIIIHATIQEYVLDKINKRMQFTKAKQNKFN 120
           A EEQAT S SLYYYG+KDLATVFFYMLVAIIIHA IQEY+LDKIN+RM F+K K +KFN
Sbjct: 61  ATEEQATESVSLYYYGIKDLATVFFYMLVAIIIHAVIQEYMLDKINRRMHFSKTKHSKFN 120

Query: 121 ESGQFSVFYFFSCIWGTFILISENCLSDPTLIWKARPHSMMTFQMKFFYISQLAYWFHAF 180
           ESGQ S FY F+C+WGTFILISEN +SDPT++W+A PH++MTFQMKFFYISQLAYW HAF
Sbjct: 121 ESGQLSAFYLFACVWGTFILISENYISDPTILWRAYPHNLMTFQMKFFYISQLAYWLHAF 180

Query: 181 PELYFQKTKKQDIPRQLVYIGLHLFHITGAYLLYLNHLGLLLLVLHYFVELLSHMCGLFY 240
           PELYFQKTKK+DIPRQLVYIGL+LFHI GAYLL LNHLGL+LLVLHYFVE L H+  LFY
Sbjct: 181 PELYFQKTKKEDIPRQLVYIGLYLFHIAGAYLLNLNHLGLVLLVLHYFVEFLFHISRLFY 240

Query: 241 FSDEKYQKGISLWAIVFILGRLVTLIVSVLTVGFHLAGSQNRNPDALTGNVNVLAAKIAV 300
           FS+EKYQKG SLWA++F+LGRL+TLI+SVLTVGF LA ++N+  D  TGN NVLA +IAV
Sbjct: 241 FSNEKYQKGFSLWAVLFVLGRLLTLILSVLTVGFGLARAENQKLDFSTGNFNVLAVRIAV 300

Query: 301 LSSSCTIQAYVTWNLITLWLQRWVEDSNIQASCMKKK----RSRSSKKRTENGV-GVETS 355
           L+S C  QA++ W  I   L+RW E S  QA  +KKK    + RSSKK TENGV G  TS
Sbjct: 301 LASICVTQAFMMWKFINFQLRRWREHSAFQAPAVKKKPTVTKGRSSKKGTENGVNGTLTS 360

Query: 356 NRVDCPPKRKEKSS 369
           N  D P  +KEKSS
Sbjct: 361 NVADSPRNKKEKSS 374


>gi|6912450 translocation-associated membrane protein 2 [Homo
           sapiens]
          Length = 370

 Score =  319 bits (818), Expect = 2e-87
 Identities = 155/328 (47%), Positives = 221/328 (67%), Gaps = 4/328 (1%)

Query: 5   KKSTKNPPVLSQEFILQNHADIVSCVGMFFLLGLVFEGTAEASIVFLTLQHSVAVPAAEE 64
           ++ TK+ P+ SQEF++ NHADI  C+ +  L+GL+FE TA+ + +F+  Q++++VP A+ 
Sbjct: 4   RRRTKSYPLFSQEFVIHNHADIGFCLVLCVLIGLMFEVTAKTAFLFILPQYNISVPTADS 63

Query: 65  QATGSKSLYYYGVKDLATVFFYMLVAIIIHATIQEYVLDKINKRMQFTKAKQNKFNESGQ 124
           +       Y+YG KDL T+ FY+ + II+HA +QEY+LDKI+KR+  +K K +KFNESGQ
Sbjct: 64  ETVH----YHYGPKDLVTILFYIFITIILHAVVQEYILDKISKRLHLSKVKHSKFNESGQ 119

Query: 125 FSVFYFFSCIWGTFILISENCLSDPTLIWKARPHSMMTFQMKFFYISQLAYWFHAFPELY 184
             VF+F S IW  +++++E  L++P  +W+  PH  + FQ+KFFY+ QLAYW HA PELY
Sbjct: 120 LVVFHFTSVIWCFYVVVTEGYLTNPRSLWEDYPHVHLPFQVKFFYLCQLAYWLHALPELY 179

Query: 185 FQKTKKQDIPRQLVYIGLHLFHITGAYLLYLNHLGLLLLVLHYFVELLSHMCGLFYFSDE 244
           FQK +K++IPRQL YI L+L HI GAYLL L+ LGL+LL+L Y  E L H   LFYF+DE
Sbjct: 180 FQKVRKEEIPRQLQYICLYLVHIAGAYLLNLSRLGLILLLLQYSTEFLFHTARLFYFADE 239

Query: 245 KYQKGISLWAIVFILGRLVTLIVSVLTVGFHLAGSQNRNPDALTGNVNVLAAKIAVLSSS 304
             +K  S WA VF + RL  L ++VL +GF LA  +N+  D   GN N L  ++ VL   
Sbjct: 240 NNEKLFSAWAAVFGVTRLFILTLAVLAIGFGLARMENQAFDPEKGNFNTLFCRLCVLLLV 299

Query: 305 CTIQAYVTWNLITLWLQRWVEDSNIQAS 332
           C  QA++ W  I   L+ W E  N Q++
Sbjct: 300 CAAQAWLMWRFIHSQLRHWREYWNEQSA 327


>gi|205360977 LAG1 homolog, ceramide synthase 4 [Homo sapiens]
          Length = 394

 Score = 55.5 bits (132), Expect = 8e-08
 Identities = 46/181 (25%), Positives = 85/181 (46%), Gaps = 12/181 (6%)

Query: 108 RMQFTKAKQNKFNESGQFSVFYFFSCIWGTFILISENCLSDPTLIWKARPHSMMTFQMKF 167
           R Q TK    KF E+    +FY  S + G  +L  E+ L  P + W   P+  +   + +
Sbjct: 126 RPQLTK----KFCEASWRFLFYLSSFVGGLSVLYHESWLWAPVMCWDRYPNQTLKPSLYW 181

Query: 168 FYISQLAYWFHAFPELYFQKTKKQDIPRQLVYIGLHLFHITGAYLLYLNHLGLLLLVLHY 227
           +Y+ +L ++      L F   K++D   Q+++  + +  +T +Y   L  +G L+L+LH 
Sbjct: 182 WYLLELGFYLSLLIRLPFD-VKRKDFKEQVIHHFVAVILMTFSYSANLLRIGSLVLLLHD 240

Query: 228 FVELLSHMCGLFYFSDEKYQKGIS----LWAIVFILGRLVTLIVSVLTVGFHLAGSQNRN 283
             + L   C +  +   +YQ+       +++ VF   RLV     +L   ++ + S NR 
Sbjct: 241 SSDYLLEACKMVNYM--QYQQVCDALFLIFSFVFFYTRLVLFPTQILYTTYYESIS-NRG 297

Query: 284 P 284
           P
Sbjct: 298 P 298


>gi|32455256 LAG1 longevity assurance 2 [Homo sapiens]
          Length = 380

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 37/162 (22%), Positives = 70/162 (43%), Gaps = 5/162 (3%)

Query: 107 KRMQFTKAKQNKFNESGQFSVFYFFSCIWGTFILISENCLSDPTLIWKARPHSMMTFQMK 166
           +R Q   +   KF E+     FY  + I G  +++ +    D   +W+  P         
Sbjct: 121 RRNQDRPSLLKKFREASWRFTFYLIAFIAGMAVIVDKPWFYDMKKVWEGYPIQSTIPSQY 180

Query: 167 FFYISQLA-YWFHAFPELYFQKTKKQDIPRQLVYIGLHLFHITGAYLLYLNHLGLLLLVL 225
           ++Y+ +L+ YW   F        K++D   Q+++    +  I+ ++       G L++ L
Sbjct: 181 WYYMIELSFYWSLLFS--IASDVKRKDFKEQIIHHVATIILISFSWFANYIRAGTLIMAL 238

Query: 226 HYFVELLSHMCGLFYFSDEK--YQKGISLWAIVFILGRLVTL 265
           H   + L     +F ++  K        ++AIVFI+ RLV L
Sbjct: 239 HDSSDYLLESAKMFNYAGWKNTCNNIFIVFAIVFIITRLVIL 280


>gi|31077094 LAG1 longevity assurance 2 [Homo sapiens]
          Length = 380

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 37/162 (22%), Positives = 70/162 (43%), Gaps = 5/162 (3%)

Query: 107 KRMQFTKAKQNKFNESGQFSVFYFFSCIWGTFILISENCLSDPTLIWKARPHSMMTFQMK 166
           +R Q   +   KF E+     FY  + I G  +++ +    D   +W+  P         
Sbjct: 121 RRNQDRPSLLKKFREASWRFTFYLIAFIAGMAVIVDKPWFYDMKKVWEGYPIQSTIPSQY 180

Query: 167 FFYISQLA-YWFHAFPELYFQKTKKQDIPRQLVYIGLHLFHITGAYLLYLNHLGLLLLVL 225
           ++Y+ +L+ YW   F        K++D   Q+++    +  I+ ++       G L++ L
Sbjct: 181 WYYMIELSFYWSLLFS--IASDVKRKDFKEQIIHHVATIILISFSWFANYIRAGTLIMAL 238

Query: 226 HYFVELLSHMCGLFYFSDEK--YQKGISLWAIVFILGRLVTL 265
           H   + L     +F ++  K        ++AIVFI+ RLV L
Sbjct: 239 HDSSDYLLESAKMFNYAGWKNTCNNIFIVFAIVFIITRLVIL 280


>gi|22218345 LAG1 homolog, ceramide synthase 5 [Homo sapiens]
          Length = 392

 Score = 37.7 bits (86), Expect = 0.017
 Identities = 39/160 (24%), Positives = 67/160 (41%), Gaps = 5/160 (3%)

Query: 106 NKRMQFTKAKQNKFNESGQFSVFYFFSCIWGTFILISENCLSDPTLIWKARPHSMMTFQM 165
           ++R Q       KF ES     FY     +G   L S     D    W   P   ++  +
Sbjct: 128 HRRNQDKPPTLTKFCESMWRFTFYLCIFCYGIRFLWSSPWFWDIRQCWHNYPFQPLSSGL 187

Query: 166 KFFYISQLA-YWFHAFPELYFQKTKKQDIPRQLVYIGLHLFHITGAYLLYLNHLGLLLLV 224
             +YI +LA YW   F +  F   K++D     V+  + +  I+ +Y+  +  +G L++ 
Sbjct: 188 YHYYIMELAFYWSLMFSQ--FTDIKRKDFLIMFVHHLVTIGLISFSYINNMVRVGTLIMC 245

Query: 225 LHYFVELLSHMCGLFYFSDEKYQKGISLWAIVFILGRLVT 264
           LH   + L     L  ++  KYQ+      ++F    +VT
Sbjct: 246 LHDVSDFLLEAAKLANYA--KYQRLCDTLFVIFSAVFMVT 283


>gi|116235446 LAG1 longevity assurance homolog 3 [Homo sapiens]
          Length = 383

 Score = 35.8 bits (81), Expect = 0.063
 Identities = 31/163 (19%), Positives = 66/163 (40%), Gaps = 9/163 (5%)

Query: 106 NKRMQFTKAKQNKFNESGQFSVFYFFSCIWGTFILISENCLSDPTLIWKARPHSMMTFQM 165
           ++R Q   ++  KF E+     FY    + G   L  +  L D   +W   P   +    
Sbjct: 119 SRRNQERPSRLKKFQEACWRFAFYLMITVAGIAFLYDKPWLYDLWEVWNGYPKQPLLPSQ 178

Query: 166 KFFYISQLAYWFHAFPELYFQKTKKQ---DIPRQLVYIGLHLFHITGAYLLYLNHLGLLL 222
            ++YI ++++++     L F   +K     I   L  I L  F     Y+      G L+
Sbjct: 179 YWYYILEMSFYWSLLFRLGFDVKRKDFLAHIIHHLAAISLMSFSWCANYI----RSGTLV 234

Query: 223 LVLHYFVELLSHMCGLFYFS--DEKYQKGISLWAIVFILGRLV 263
           +++H   ++      +F ++   +       +++ +F + RL+
Sbjct: 235 MIVHDVADIWLESAKMFSYAGWTQTCNTLFFIFSTIFFISRLI 277


>gi|38176296 LAG1 homolog, ceramide synthase 1 isoform 2 [Homo
           sapiens]
          Length = 337

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 23/112 (20%), Positives = 50/112 (44%), Gaps = 3/112 (2%)

Query: 118 KFNESGQFSVFYFFSCIWGTFILISENCL---SDPTLIWKARPHSMMTFQMKFFYISQLA 174
           K  ES    +FY  S  +  ++L   +       P++ +   P   +   +   Y+ Q +
Sbjct: 98  KMPESAWKFLFYLGSWSYSAYLLFGTDYPFFHDPPSVFYDWTPGMAVPRDIAAAYLLQGS 157

Query: 175 YWFHAFPELYFQKTKKQDIPRQLVYIGLHLFHITGAYLLYLNHLGLLLLVLH 226
           ++ H+     +  T ++D    L++  + L  I  +Y    +++G+L+L LH
Sbjct: 158 FYGHSIYATLYMDTWRKDSVVMLLHHVVTLILIVSSYAFRYHNVGILVLFLH 209


>gi|11641421 LAG1 homolog, ceramide synthase 1 isoform 1 [Homo
           sapiens]
          Length = 350

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 23/112 (20%), Positives = 50/112 (44%), Gaps = 3/112 (2%)

Query: 118 KFNESGQFSVFYFFSCIWGTFILISENCL---SDPTLIWKARPHSMMTFQMKFFYISQLA 174
           K  ES    +FY  S  +  ++L   +       P++ +   P   +   +   Y+ Q +
Sbjct: 98  KMPESAWKFLFYLGSWSYSAYLLFGTDYPFFHDPPSVFYDWTPGMAVPRDIAAAYLLQGS 157

Query: 175 YWFHAFPELYFQKTKKQDIPRQLVYIGLHLFHITGAYLLYLNHLGLLLLVLH 226
           ++ H+     +  T ++D    L++  + L  I  +Y    +++G+L+L LH
Sbjct: 158 FYGHSIYATLYMDTWRKDSVVMLLHHVVTLILIVSSYAFRYHNVGILVLFLH 209


>gi|6005715 solute carrier family 6 (amino acid transporter), member
           14 [Homo sapiens]
          Length = 642

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 21/96 (21%), Positives = 42/96 (43%), Gaps = 17/96 (17%)

Query: 74  YYGVKDLATVFFY--------MLVAIIIHATIQ---EYVLDKINKRMQFTKAKQNKFNES 122
           + G+K    V ++        +L+ ++  AT++   + +   I  +  FTK K+ +  + 
Sbjct: 255 FKGIKSSGKVVYFTALFPYVVLLILLVRGATLEGASKGISYYIGAQSNFTKLKEAEVWKD 314

Query: 123 GQFSVFYFFSCIWGTFILIS------ENCLSDPTLI 152
               +FY  S  WG  + +S       NC SD  ++
Sbjct: 315 AATQIFYSLSVAWGGLVALSSYNKFKNNCFSDAIVV 350


>gi|31559821 gap junction protein, gamma 3, 30.2kDa [Homo sapiens]
          Length = 279

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 32/123 (26%), Positives = 53/123 (43%), Gaps = 17/123 (13%)

Query: 252 LWAIVFILGRLVTLIVSVLTVGFHLAGSQ-------NRNP--DALTGNVNVLAAKIAVL- 301
           LWA V  LG  + L  + L + +HL G Q        R P   ++T N++  + K   L 
Sbjct: 134 LWAYVAQLGARLVLEGAALGLQYHLYGFQMPSSFACRREPCLGSITCNLSRPSEKTIFLK 193

Query: 302 -----SSSCTIQAYVTWNLITL--WLQRWVEDSNIQASCMKKKRSRSSKKRTENGVGVET 354
                S  C +  ++   L+ L  W + W   S+     +  + +R  KK T++   VET
Sbjct: 194 TMFGVSGFCLLFTFLELVLLGLGRWWRTWKHKSSSSKYFLTSESTRRHKKATDSLPVVET 253

Query: 355 SNR 357
             +
Sbjct: 254 KEQ 256


>gi|133925809 inter-alpha (globulin) inhibitor H3 preproprotein
           [Homo sapiens]
          Length = 890

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 2/59 (3%)

Query: 261 RLVTLIVSVLTVGFHLAGSQNRNPDALTGNVNVLAAKIAVLSSSCTIQAYVTWNLITLW 319
           RL+   V+ LTV   + G +  +PD+ T        K+ + ++    Q  VT   ITLW
Sbjct: 678 RLIQDAVTGLTVNGQITGDKRGSPDSKTR--KTYFGKLGIANAQMDFQVEVTTEKITLW 734


>gi|167004078 methyltransferase-like protein 1 isoform a [Homo
           sapiens]
          Length = 276

 Score = 28.9 bits (63), Expect = 7.7
 Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 17/77 (22%)

Query: 167 FFYISQLAYWFHAFPELYFQKTKKQDIPRQLVYIGLHLFHITGAYLL----YLNHLGLLL 222
           FFY  QL   F  FP+ +F++TK             H + I    LL    Y+  +G L+
Sbjct: 148 FFYKGQLTKMFFLFPDPHFKRTK-------------HKWRIISPTLLAEYAYVLRVGGLV 194

Query: 223 LVLHYFVELLSHMCGLF 239
             +   +EL   MC  F
Sbjct: 195 YTITDVLELHDWMCTHF 211


>gi|50593008 transmembrane BAX inhibitor motif containing 1 [Homo
           sapiens]
          Length = 311

 Score = 28.9 bits (63), Expect = 7.7
 Identities = 13/38 (34%), Positives = 19/38 (50%)

Query: 18  FILQNHADIVSCVGMFFLLGLVFEGTAEASIVFLTLQH 55
           F  Q   D  SC G+F +LG+V   T   + + L  Q+
Sbjct: 208 FCFQTKVDFTSCTGLFCVLGIVLLVTGIVTSIVLYFQY 245


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.326    0.137    0.419 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,976,790
Number of Sequences: 37866
Number of extensions: 513401
Number of successful extensions: 1568
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1554
Number of HSP's gapped (non-prelim): 15
length of query: 369
length of database: 18,247,518
effective HSP length: 104
effective length of query: 265
effective length of database: 14,309,454
effective search space: 3792005310
effective search space used: 3792005310
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 63 (28.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
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