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Search of human proteins with 144953878
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|144953878 signal-regulatory protein beta 1 isoform 2
precursor [Homo sapiens]
(181 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|144953878 signal-regulatory protein beta 1 isoform 2 precurso... 362 e-100
gi|144953876 signal-regulatory protein beta 1 isoform 1 precurso... 294 3e-80
gi|209529703 signal-regulatory protein beta 1 isoform 3 precurso... 275 1e-74
gi|94538337 signal-regulatory protein gamma isoform 2 precursor ... 254 2e-68
gi|169217521 PREDICTED: similar to signal-regulatory protein bet... 240 6e-64
gi|239751927 PREDICTED: similar to signal-regulatory protein bet... 239 7e-64
gi|94538339 signal-regulatory protein gamma isoform 3 precursor ... 236 6e-63
gi|94538335 signal-regulatory protein gamma isoform 1 precursor ... 236 6e-63
gi|18426911 signal-regulatory protein alpha precursor [Homo sapi... 223 7e-59
gi|91105767 signal-regulatory protein alpha precursor [Homo sapi... 223 7e-59
gi|91105764 signal-regulatory protein alpha precursor [Homo sapi... 223 7e-59
gi|239757417 PREDICTED: similar to hCG2019710 [Homo sapiens] 171 2e-43
gi|239751934 PREDICTED: hypothetical protein XP_002348043 [Homo ... 171 2e-43
gi|30425382 signal-regulatory protein delta [Homo sapiens] 130 8e-31
gi|239746419 PREDICTED: hypothetical protein XP_002344218 [Homo ... 114 6e-26
gi|198386341 signal-regulatory protein beta 2 isoform 2 [Homo sa... 92 2e-19
gi|171906611 signal-regulatory protein beta 2 isoform 1 [Homo sa... 91 7e-19
gi|239751925 PREDICTED: similar to signal-regulatory protein alp... 57 9e-09
gi|239753212 PREDICTED: similar to hCG1686089 [Homo sapiens] 50 1e-06
gi|239749464 PREDICTED: hypothetical protein XP_002347049 [Homo ... 50 1e-06
gi|169163270 PREDICTED: similar to hCG2043206 [Homo sapiens] 49 2e-06
gi|239753214 PREDICTED: similar to hCG2043206 [Homo sapiens] 48 4e-06
gi|169163724 PREDICTED: similar to hCG26659 [Homo sapiens] 44 1e-04
gi|239747852 PREDICTED: hypothetical protein XP_002346449 [Homo ... 44 1e-04
gi|169163023 PREDICTED: similar to hCG26659 [Homo sapiens] 44 1e-04
gi|239747814 PREDICTED: hypothetical protein XP_002348323 [Homo ... 43 1e-04
gi|6453813 butyrophilin, subfamily 2, member A2 isoform a [Homo ... 43 1e-04
gi|5921461 butyrophilin, subfamily 2, member A1 isoform 1 precur... 42 2e-04
gi|17975772 butyrophilin, subfamily 2, member A1 isoform 2 precu... 42 2e-04
gi|239755286 PREDICTED: similar to hCG1742442 [Homo sapiens] 40 8e-04
>gi|144953878 signal-regulatory protein beta 1 isoform 2 precursor
[Homo sapiens]
Length = 181
Score = 362 bits (928), Expect = e-100
Identities = 181/181 (100%), Positives = 181/181 (100%)
Query: 1 MPVPASWPHLPSPFLLMTLLLGRLTGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLI 60
MPVPASWPHLPSPFLLMTLLLGRLTGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLI
Sbjct: 1 MPVPASWPHLPSPFLLMTLLLGRLTGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLI 60
Query: 61 PVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYC 120
PVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYC
Sbjct: 61 PVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYC 120
Query: 121 VKFRKGSPDDVEFKSGAGTELSVREAALAPTAPLLVALLLGPKLLLVVGVSAIYICWKQK 180
VKFRKGSPDDVEFKSGAGTELSVREAALAPTAPLLVALLLGPKLLLVVGVSAIYICWKQK
Sbjct: 121 VKFRKGSPDDVEFKSGAGTELSVREAALAPTAPLLVALLLGPKLLLVVGVSAIYICWKQK 180
Query: 181 A 181
A
Sbjct: 181 A 181
>gi|144953876 signal-regulatory protein beta 1 isoform 1 precursor
[Homo sapiens]
Length = 398
Score = 294 bits (752), Expect = 3e-80
Identities = 146/150 (97%), Positives = 146/150 (97%)
Query: 1 MPVPASWPHLPSPFLLMTLLLGRLTGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLI 60
MPVPASWPHLPSPFLLMTLLLGRLTGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLI
Sbjct: 1 MPVPASWPHLPSPFLLMTLLLGRLTGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLI 60
Query: 61 PVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYC 120
PVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYC
Sbjct: 61 PVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYC 120
Query: 121 VKFRKGSPDDVEFKSGAGTELSVREAALAP 150
VKFRKGSPDDVEFKSGAGTELSVR AP
Sbjct: 121 VKFRKGSPDDVEFKSGAGTELSVRAKPSAP 150
Score = 76.3 bits (186), Expect = 1e-14
Identities = 58/175 (33%), Positives = 86/175 (49%), Gaps = 18/175 (10%)
Query: 17 MTLLLGRLTGVAGEDELQVIQPEKSVS---VAAGESATLRCAMTSLIPVG-PIMWFRGAG 72
+TL L G A E + P V+ + A A + C +++ P G + W
Sbjct: 232 ITLQGDPLRGTANLSEAIRVPPTLEVTQQPMRAENQANVTCQVSNFYPRGLQLTWLENGN 291
Query: 73 AGR----ELIYNQKEGHFPRVT--TVSELTKRNNLDFSISISNITPADAGTYYCVKFRKG 126
R + K+G + ++ V+ R+++ + + + Y ++
Sbjct: 292 VSRTETASTLIENKDGTYNWMSWLLVNTCAHRDDVVLTCQVEHDGQQAVSKSYALEISAH 351
Query: 127 SPDDVEFKSGAGTELSVREAALAPTAPLLVALLLGPKLLLVVGVSAIYICWKQKA 181
+ G++++ EAALAPTAPLLVALLLGPKLLLVVGVSAIYICWKQKA
Sbjct: 352 QKEH-------GSDIT-HEAALAPTAPLLVALLLGPKLLLVVGVSAIYICWKQKA 398
>gi|209529703 signal-regulatory protein beta 1 isoform 3 precursor
[Homo sapiens]
Length = 398
Score = 275 bits (704), Expect = 1e-74
Identities = 134/150 (89%), Positives = 140/150 (93%)
Query: 1 MPVPASWPHLPSPFLLMTLLLGRLTGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLI 60
MPVPASWPHLPSPFLLMTLLLGRLTGVAGE+ELQVIQP+KS+SVAAGESATL C +TSLI
Sbjct: 1 MPVPASWPHLPSPFLLMTLLLGRLTGVAGEEELQVIQPDKSISVAAGESATLHCTVTSLI 60
Query: 61 PVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYC 120
PVGPI WFRGAG GRELIYNQKEGHFPRVTTVS+LTKRNN+DFSI ISNITPADAGTYYC
Sbjct: 61 PVGPIQWFRGAGPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRISNITPADAGTYYC 120
Query: 121 VKFRKGSPDDVEFKSGAGTELSVREAALAP 150
VKFRKGSPD VEFKSGAGTELSVR AP
Sbjct: 121 VKFRKGSPDHVEFKSGAGTELSVRAKPSAP 150
Score = 57.0 bits (136), Expect = 9e-09
Identities = 27/35 (77%), Positives = 30/35 (85%)
Query: 147 ALAPTAPLLVALLLGPKLLLVVGVSAIYICWKQKA 181
ALA APLL+A LLGPK+LLVVGVS IY+ WKQKA
Sbjct: 364 ALASAAPLLIAFLLGPKVLLVVGVSVIYVYWKQKA 398
>gi|94538337 signal-regulatory protein gamma isoform 2 precursor
[Homo sapiens]
Length = 170
Score = 254 bits (650), Expect = 2e-68
Identities = 126/180 (70%), Positives = 148/180 (82%), Gaps = 11/180 (6%)
Query: 1 MPVPASWPHLPSPFLLMTLLLGRLTGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLI 60
MPVPASWPH P PFLL+TLLLG LT VAGE+ELQ+IQPEK + V G++ATL C +TSL+
Sbjct: 1 MPVPASWPHPPGPFLLLTLLLG-LTEVAGEEELQMIQPEKLLLVTVGKTATLHCTVTSLL 59
Query: 61 PVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYC 120
PVGP++WFRG G GRELIYNQKEGHFPRVTTVS+LTKRNN+DFSI IS+ITPAD GTYYC
Sbjct: 60 PVGPVLWFRGVGPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRISSITPADVGTYYC 119
Query: 121 VKFRKGSPDDVEFKSGAGTELSVREAALAPTAPLLVALLLGPKLLLVVGVSAIYICWKQK 180
VKFRKGSP++VEFKSG GTE+++ A + TA LL+A+LLGP IY+ WKQK
Sbjct: 120 VKFRKGSPENVEFKSGPGTEMALGGPASSLTALLLIAVLLGP----------IYVPWKQK 169
>gi|169217521 PREDICTED: similar to signal-regulatory protein beta 1
[Homo sapiens]
Length = 160
Score = 240 bits (612), Expect = 6e-64
Identities = 122/131 (93%), Positives = 125/131 (95%), Gaps = 1/131 (0%)
Query: 26 GVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGH 85
GVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGH
Sbjct: 9 GVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGH 68
Query: 86 FPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVR- 144
FPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVR
Sbjct: 69 FPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVRG 128
Query: 145 EAALAPTAPLL 155
E ++ PL+
Sbjct: 129 EYSVGLLCPLV 139
>gi|239751927 PREDICTED: similar to signal-regulatory protein beta 1
[Homo sapiens]
Length = 136
Score = 239 bits (611), Expect = 7e-64
Identities = 119/119 (100%), Positives = 119/119 (100%)
Query: 26 GVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGH 85
GVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGH
Sbjct: 9 GVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGH 68
Query: 86 FPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVR 144
FPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVR
Sbjct: 69 FPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVR 127
>gi|94538339 signal-regulatory protein gamma isoform 3 precursor
[Homo sapiens]
Length = 276
Score = 236 bits (603), Expect = 6e-63
Identities = 116/162 (71%), Positives = 137/162 (84%), Gaps = 8/162 (4%)
Query: 1 MPVPASWPHLPSPFLLMTLLLGRLTGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLI 60
MPVPASWPH P PFLL+TLLLG LT VAGE+ELQ+IQPEK + V G++ATL C +TSL+
Sbjct: 1 MPVPASWPHPPGPFLLLTLLLG-LTEVAGEEELQMIQPEKLLLVTVGKTATLHCTVTSLL 59
Query: 61 PVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYC 120
PVGP++WFRG G GRELIYNQKEGHFPRVTTVS+LTKRNN+DFSI IS+ITPAD GTYYC
Sbjct: 60 PVGPVLWFRGVGPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRISSITPADVGTYYC 119
Query: 121 VKFRKGSPDDVEFKSGAGTELSVREAALAPTAPLLVALLLGP 162
VKFRKGSP++VEFKSG GTE+++ P+AP ++LGP
Sbjct: 120 VKFRKGSPENVEFKSGPGTEMAL---GAKPSAP----VVLGP 154
Score = 29.6 bits (65), Expect = 1.5
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 10/39 (25%)
Query: 142 SVREAALAPTAPLLVALLLGPKLLLVVGVSAIYICWKQK 180
++R A + TA LL+A+LLGP IY+ WKQK
Sbjct: 247 AIRGPASSLTALLLIAVLLGP----------IYVPWKQK 275
>gi|94538335 signal-regulatory protein gamma isoform 1 precursor
[Homo sapiens]
Length = 387
Score = 236 bits (603), Expect = 6e-63
Identities = 116/162 (71%), Positives = 137/162 (84%), Gaps = 8/162 (4%)
Query: 1 MPVPASWPHLPSPFLLMTLLLGRLTGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLI 60
MPVPASWPH P PFLL+TLLLG LT VAGE+ELQ+IQPEK + V G++ATL C +TSL+
Sbjct: 1 MPVPASWPHPPGPFLLLTLLLG-LTEVAGEEELQMIQPEKLLLVTVGKTATLHCTVTSLL 59
Query: 61 PVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYC 120
PVGP++WFRG G GRELIYNQKEGHFPRVTTVS+LTKRNN+DFSI IS+ITPAD GTYYC
Sbjct: 60 PVGPVLWFRGVGPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRISSITPADVGTYYC 119
Query: 121 VKFRKGSPDDVEFKSGAGTELSVREAALAPTAPLLVALLLGP 162
VKFRKGSP++VEFKSG GTE+++ P+AP ++LGP
Sbjct: 120 VKFRKGSPENVEFKSGPGTEMAL---GAKPSAP----VVLGP 154
Score = 27.3 bits (59), Expect = 7.3
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 10/30 (33%)
Query: 151 TAPLLVALLLGPKLLLVVGVSAIYICWKQK 180
TA LL+A+LLGP IY+ WKQK
Sbjct: 367 TALLLIAVLLGP----------IYVPWKQK 386
>gi|18426911 signal-regulatory protein alpha precursor [Homo
sapiens]
Length = 504
Score = 223 bits (568), Expect = 7e-59
Identities = 109/126 (86%), Positives = 115/126 (91%)
Query: 25 TGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEG 84
+GVAGE+ELQVIQP+KSV VAAGE+ATLRC TSLIPVGPI WFRGAG GRELIYNQKEG
Sbjct: 26 SGVAGEEELQVIQPDKSVLVAAGETATLRCTATSLIPVGPIQWFRGAGPGRELIYNQKEG 85
Query: 85 HFPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVR 144
HFPRVTTVS+LTKRNN+DFSI I NITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVR
Sbjct: 86 HFPRVTTVSDLTKRNNMDFSIRIGNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVR 145
Query: 145 EAALAP 150
AP
Sbjct: 146 AKPSAP 151
>gi|91105767 signal-regulatory protein alpha precursor [Homo
sapiens]
Length = 504
Score = 223 bits (568), Expect = 7e-59
Identities = 109/126 (86%), Positives = 115/126 (91%)
Query: 25 TGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEG 84
+GVAGE+ELQVIQP+KSV VAAGE+ATLRC TSLIPVGPI WFRGAG GRELIYNQKEG
Sbjct: 26 SGVAGEEELQVIQPDKSVLVAAGETATLRCTATSLIPVGPIQWFRGAGPGRELIYNQKEG 85
Query: 85 HFPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVR 144
HFPRVTTVS+LTKRNN+DFSI I NITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVR
Sbjct: 86 HFPRVTTVSDLTKRNNMDFSIRIGNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVR 145
Query: 145 EAALAP 150
AP
Sbjct: 146 AKPSAP 151
>gi|91105764 signal-regulatory protein alpha precursor [Homo
sapiens]
Length = 504
Score = 223 bits (568), Expect = 7e-59
Identities = 109/126 (86%), Positives = 115/126 (91%)
Query: 25 TGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEG 84
+GVAGE+ELQVIQP+KSV VAAGE+ATLRC TSLIPVGPI WFRGAG GRELIYNQKEG
Sbjct: 26 SGVAGEEELQVIQPDKSVLVAAGETATLRCTATSLIPVGPIQWFRGAGPGRELIYNQKEG 85
Query: 85 HFPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVR 144
HFPRVTTVS+LTKRNN+DFSI I NITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVR
Sbjct: 86 HFPRVTTVSDLTKRNNMDFSIRIGNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVR 145
Query: 145 EAALAP 150
AP
Sbjct: 146 AKPSAP 151
>gi|239757417 PREDICTED: similar to hCG2019710 [Homo sapiens]
Length = 651
Score = 171 bits (434), Expect = 2e-43
Identities = 94/155 (60%), Positives = 112/155 (72%), Gaps = 13/155 (8%)
Query: 27 VAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHF 86
VAGE ELQVIQPE VSVAAGE ATL C +TSL+PVGPI WFRGA G++LIY+ K H
Sbjct: 510 VAGE-ELQVIQPEAFVSVAAGEMATLNCTVTSLLPVGPIQWFRGACPGQKLIYSPKRCHS 568
Query: 87 PRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVREA 146
PRVTT+S+ KRN+ D+SI IS+IT DAGTYYC+K R+ P +VE KSG GT++SVR
Sbjct: 569 PRVTTISDQRKRNSTDYSIRISSITLEDAGTYYCMKLRRAIPANVEIKSGPGTQMSVR-- 626
Query: 147 ALAPTAPLLVALLLGPKLLLVVGVSAIYICWKQKA 181
LLLG K+LL+V VSA Y+ KQKA
Sbjct: 627 ----------GLLLGSKVLLLVDVSAAYVHRKQKA 651
Score = 117 bits (292), Expect = 7e-27
Identities = 62/123 (50%), Positives = 76/123 (61%), Gaps = 27/123 (21%)
Query: 25 TGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEG 84
TG AGE+ELQVIQPEK WF+G G+ELIY+ K G
Sbjct: 416 TGAAGEEELQVIQPEK--------------------------WFKGTETGQELIYSSKGG 449
Query: 85 HFPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVR 144
HFP++ +S++TKRNN DFS+ I++IT A+ GTY CVKF KG P D+E KSG GTELSV
Sbjct: 450 HFPKIACISDITKRNNTDFSMCITSITRANTGTYNCVKFWKGGP-DMELKSGPGTELSVH 508
Query: 145 EAA 147
A
Sbjct: 509 RVA 511
>gi|239751934 PREDICTED: hypothetical protein XP_002348043 [Homo
sapiens]
Length = 651
Score = 171 bits (434), Expect = 2e-43
Identities = 94/155 (60%), Positives = 112/155 (72%), Gaps = 13/155 (8%)
Query: 27 VAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHF 86
VAGE ELQVIQPE VSVAAGE ATL C +TSL+PVGPI WFRGA G++LIY+ K H
Sbjct: 510 VAGE-ELQVIQPEAFVSVAAGEMATLNCTVTSLLPVGPIQWFRGACPGQKLIYSPKRCHS 568
Query: 87 PRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVREA 146
PRVTT+S+ KRN+ D+SI IS+IT DAGTYYC+K R+ P +VE KSG GT++SVR
Sbjct: 569 PRVTTISDQRKRNSTDYSIRISSITLEDAGTYYCMKLRRAIPANVEIKSGPGTQMSVR-- 626
Query: 147 ALAPTAPLLVALLLGPKLLLVVGVSAIYICWKQKA 181
LLLG K+LL+V VSA Y+ KQKA
Sbjct: 627 ----------GLLLGSKVLLLVDVSAAYVHRKQKA 651
Score = 117 bits (292), Expect = 7e-27
Identities = 62/123 (50%), Positives = 76/123 (61%), Gaps = 27/123 (21%)
Query: 25 TGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEG 84
TG AGE+ELQVIQPEK WF+G G+ELIY+ K G
Sbjct: 416 TGAAGEEELQVIQPEK--------------------------WFKGTETGQELIYSSKGG 449
Query: 85 HFPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVR 144
HFP++ +S++TKRNN DFS+ I++IT A+ GTY CVKF KG P D+E KSG GTELSV
Sbjct: 450 HFPKIACISDITKRNNTDFSMCITSITRANTGTYNCVKFWKGGP-DMELKSGPGTELSVH 508
Query: 145 EAA 147
A
Sbjct: 509 RVA 511
>gi|30425382 signal-regulatory protein delta [Homo sapiens]
Length = 197
Score = 130 bits (326), Expect = 8e-31
Identities = 72/145 (49%), Positives = 93/145 (64%), Gaps = 4/145 (2%)
Query: 1 MPVPASWPHLPSPFLLMTLLLGRLTGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLI 60
MP+PAS H P P LL+ LLL L GV +Q Q E S +V+ GES L C++ +
Sbjct: 1 MPIPASPLHPPLPSLLLYLLL-ELAGVTHVFHVQ--QTEMSQTVSTGESIILSCSVPDTL 57
Query: 61 PVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYC 120
P GP++WF+G G R+LIYN K+G+FPRV + + TK N DFS I I+ ADAGTYYC
Sbjct: 58 PNGPVLWFKGTGPNRKLIYNFKQGNFPRVKEIGDTTKPGNTDFSTRIREISLADAGTYYC 117
Query: 121 VKFRKGSPDDVEFKSGAGTELSVRE 145
VKF KG E++SG GT++ V E
Sbjct: 118 VKFIKGRAIK-EYQSGRGTQVFVTE 141
>gi|239746419 PREDICTED: hypothetical protein XP_002344218 [Homo
sapiens]
Length = 532
Score = 114 bits (284), Expect = 6e-26
Identities = 60/119 (50%), Positives = 75/119 (63%), Gaps = 27/119 (22%)
Query: 25 TGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEG 84
TG AGE+EL+VIQPEK WF+G G+ELIY+ K G
Sbjct: 416 TGAAGEEELRVIQPEK--------------------------WFKGTETGQELIYSSKGG 449
Query: 85 HFPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSV 143
HFP++ +S++TKRNN DFS+ I++IT A+ GTY CVKF KG P D+E KSG GTELSV
Sbjct: 450 HFPKIACISDITKRNNTDFSMCITSITRANTGTYNCVKFWKGGP-DMELKSGPGTELSV 507
>gi|198386341 signal-regulatory protein beta 2 isoform 2 [Homo
sapiens]
Length = 244
Score = 92.0 bits (227), Expect = 2e-19
Identities = 60/168 (35%), Positives = 84/168 (50%), Gaps = 30/168 (17%)
Query: 1 MPVPASWPHLPSPFLLMTLLL--GRLTGVAGEDELQVIQPEKSVSVA------------- 45
M P HLP FLL+ L+L +G + ++ QV+QPE + VA
Sbjct: 5 MSAPTCLAHLPPCFLLLALVLVPSDASGQSSRNDWQVLQPEGPMLVAEGAGDPEPDLWII 64
Query: 46 ---------AGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELT 96
G++ L C + P GPI WF+GAG RE IYN P+ T V
Sbjct: 65 QPQELVLGTTGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYNFGGISHPKETAV---- 120
Query: 97 KRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVR 144
+ +N DFSI + N++ DAGTYYCVKF++ + ++ SG GT L V+
Sbjct: 121 QASNNDFSILLQNVSSEDAGTYYCVKFQR--KPNRQYLSGQGTSLKVK 166
>gi|171906611 signal-regulatory protein beta 2 isoform 1 [Homo
sapiens]
Length = 342
Score = 90.5 bits (223), Expect = 7e-19
Identities = 56/149 (37%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 1 MPVPASWPHLPSPFLLMTLLL--GRLTGVAGEDELQVIQPEKSVSVAAGESATLRCAMTS 58
M P HLP FLL+ L+L +G + ++ QV+QPE + VA GE+ LRC +
Sbjct: 5 MSAPTCLAHLPPCFLLLALVLVPSDASGQSSRNDWQVLQPEGPMLVAEGETLLLRCMVVG 64
Query: 59 LIPVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRN-NLDFSISISNITPADAGT 117
G I W + + ++ IYN K G FP V + + T N D+SI I N+T GT
Sbjct: 65 SCTDGMIKWVKVSTQDQQEIYNFKRGSFPGVMPMIQRTSEPLNCDYSIYIHNVTREHTGT 124
Query: 118 YYCVKFRKGSPDDVEFKSGAGTELSVREA 146
Y+CV+F G + E KS GT + V+ A
Sbjct: 125 YHCVRF-DGLSEHSEMKSDEGTSVLVKGA 152
Score = 88.2 bits (217), Expect = 4e-18
Identities = 48/115 (41%), Positives = 68/115 (59%), Gaps = 6/115 (5%)
Query: 30 EDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRV 89
E +L +IQP++ V G++ L C + P GPI WF+GAG RE IYN P+
Sbjct: 156 EPDLWIIQPQELVLGTTGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYNFGGISHPKE 215
Query: 90 TTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVR 144
T V + +N DFSI + N++ DAGTYYCVKF++ + ++ SG GT L V+
Sbjct: 216 TAV----QASNNDFSILLQNVSSEDAGTYYCVKFQR--KPNRQYLSGQGTSLKVK 264
>gi|239751925 PREDICTED: similar to signal-regulatory protein alpha
[Homo sapiens]
Length = 87
Score = 57.0 bits (136), Expect = 9e-09
Identities = 27/35 (77%), Positives = 30/35 (85%)
Query: 147 ALAPTAPLLVALLLGPKLLLVVGVSAIYICWKQKA 181
ALA APLL+A LLGPK+LLVVGVS IY+ WKQKA
Sbjct: 53 ALASAAPLLIAFLLGPKVLLVVGVSVIYVYWKQKA 87
>gi|239753212 PREDICTED: similar to hCG1686089 [Homo sapiens]
Length = 152
Score = 49.7 bits (117), Expect = 1e-06
Identities = 40/154 (25%), Positives = 64/154 (41%), Gaps = 26/154 (16%)
Query: 10 LPSPFLLMTLLLGRLTGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFR 69
+ +P L+ LLL L GE + + Q ++S++ GE ATL C + + + W
Sbjct: 1 METPAQLLFLLLLWLPDTTGE--IVLTQSPATLSLSPGERATLSCGASQSVSSSYLAW-- 56
Query: 70 GAGAGRELIYNQKEGHFPRVTTVSELTKRNNL-----------DFSISISNITPADAGTY 118
Y QK G PR+ ++ + DF+++IS + P D Y
Sbjct: 57 ---------YQQKPGLAPRLLIYDASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVY 107
Query: 119 YCVKFRKGSPD--DVEFKSGAGTELSVREAALAP 150
YC ++ P +E K+ A L R L P
Sbjct: 108 YCQQYGSSPPTVIQLETKTSARPSLFTRLYQLLP 141
>gi|239749464 PREDICTED: hypothetical protein XP_002347049 [Homo
sapiens]
Length = 152
Score = 49.7 bits (117), Expect = 1e-06
Identities = 40/154 (25%), Positives = 64/154 (41%), Gaps = 26/154 (16%)
Query: 10 LPSPFLLMTLLLGRLTGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFR 69
+ +P L+ LLL L GE + + Q ++S++ GE ATL C + + + W
Sbjct: 1 METPAQLLFLLLLWLPDTTGE--IVLTQSPATLSLSPGERATLSCGASQSVSSSYLAW-- 56
Query: 70 GAGAGRELIYNQKEGHFPRVTTVSELTKRNNL-----------DFSISISNITPADAGTY 118
Y QK G PR+ ++ + DF+++IS + P D Y
Sbjct: 57 ---------YQQKPGLAPRLLIYDASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVY 107
Query: 119 YCVKFRKGSPD--DVEFKSGAGTELSVREAALAP 150
YC ++ P +E K+ A L R L P
Sbjct: 108 YCQQYGSSPPTVIQLETKTSARPSLFTRLYQLLP 141
>gi|169163270 PREDICTED: similar to hCG2043206 [Homo sapiens]
Length = 151
Score = 49.3 bits (116), Expect = 2e-06
Identities = 37/145 (25%), Positives = 62/145 (42%), Gaps = 24/145 (16%)
Query: 10 LPSPFLLMTLLLGRLTGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFR 69
+ +P L+ LLL L GE + + Q ++S++ GE ATL C + + + W
Sbjct: 1 MEAPAQLLFLLLLWLPDTTGE--IVMTQSPATLSLSPGERATLSCRASQSVSSSYLSW-- 56
Query: 70 GAGAGRELIYNQKEGHFPRVTTVSELTKRNNL-----------DFSISISNITPADAGTY 118
Y QK G PR+ T+ + DF+++IS++ P D Y
Sbjct: 57 ---------YQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTDFTLTISSLQPEDFAVY 107
Query: 119 YCVKFRKGSPDDVEFKSGAGTELSV 143
YC + P ++ ++ T SV
Sbjct: 108 YCQQDYNLPPTVIQHETKTSTRPSV 132
>gi|239753214 PREDICTED: similar to hCG2043206 [Homo sapiens]
Length = 157
Score = 48.1 bits (113), Expect = 4e-06
Identities = 37/148 (25%), Positives = 62/148 (41%), Gaps = 25/148 (16%)
Query: 10 LPSPFLLMTLLLGRLTGVAG---EDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIM 66
+ +P L+ LLL L G E+ + Q ++S++ GE ATL C + + +
Sbjct: 1 MEAPAQLLFLLLLWLPGEGNMRYHGEIVMTQSPATLSLSPGERATLSCRASQSVSSSYLS 60
Query: 67 WFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNL-----------DFSISISNITPADA 115
W Y QK G PR+ T+ + DF+++IS++ P D
Sbjct: 61 W-----------YQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTDFTLTISSLQPEDF 109
Query: 116 GTYYCVKFRKGSPDDVEFKSGAGTELSV 143
YYC + P ++ ++ T SV
Sbjct: 110 AVYYCQQDYNLPPTVIQHETKTSTRPSV 137
>gi|169163724 PREDICTED: similar to hCG26659 [Homo sapiens]
Length = 191
Score = 43.5 bits (101), Expect = 1e-04
Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 25/121 (20%)
Query: 13 PFLLMTLLLGRLTGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAG 72
P L+ LLL L G ++QV Q S+S + G+ T+ C + I G + W
Sbjct: 6 PAQLLGLLLLWLRGA--RCDIQVTQSPSSLSASVGDRVTITCRASQGISNG-LSW----- 57
Query: 73 AGRELIYNQKEGHFPRVTTVSELTKRNNL-----------DFSISISNITPADAGTYYCV 121
Y QK G P + + + ++ + DF+++IS++ P D TYYC+
Sbjct: 58 ------YQQKPGQAPTLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDVATYYCL 111
Query: 122 K 122
+
Sbjct: 112 Q 112
>gi|239747852 PREDICTED: hypothetical protein XP_002346449 [Homo
sapiens]
Length = 155
Score = 43.5 bits (101), Expect = 1e-04
Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 25/121 (20%)
Query: 13 PFLLMTLLLGRLTGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAG 72
P L+ LLL L G ++QV Q S+S + G+ T+ C + I G + W
Sbjct: 6 PAQLLGLLLLWLRGA--RCDIQVTQSPSSLSASVGDRVTITCRASQGISNG-LSW----- 57
Query: 73 AGRELIYNQKEGHFPRVTTVSELTKRNNL-----------DFSISISNITPADAGTYYCV 121
Y QK G P + + + ++ + DF+++IS++ P D TYYC+
Sbjct: 58 ------YQQKPGQAPTLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDVATYYCL 111
Query: 122 K 122
+
Sbjct: 112 Q 112
>gi|169163023 PREDICTED: similar to hCG26659 [Homo sapiens]
Length = 191
Score = 43.5 bits (101), Expect = 1e-04
Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 25/121 (20%)
Query: 13 PFLLMTLLLGRLTGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAG 72
P L+ LLL L G ++QV Q S+S + G+ T+ C + I G + W
Sbjct: 6 PAQLLGLLLLWLRGA--RCDIQVTQSPSSLSASVGDRVTITCRASQGISNG-LSW----- 57
Query: 73 AGRELIYNQKEGHFPRVTTVSELTKRNNL-----------DFSISISNITPADAGTYYCV 121
Y QK G P + + + ++ + DF+++IS++ P D TYYC+
Sbjct: 58 ------YQQKPGQAPTLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDVATYYCL 111
Query: 122 K 122
+
Sbjct: 112 Q 112
>gi|239747814 PREDICTED: hypothetical protein XP_002348323 [Homo
sapiens]
Length = 162
Score = 43.1 bits (100), Expect = 1e-04
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 9/92 (9%)
Query: 33 LQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWF--RGAGAGRELIY--NQKEGHFPR 88
+Q+ QP S+S + G+S T+ C + + W+ + A + LIY + + P
Sbjct: 74 IQMTQPPSSLSASVGDSVTITCRASQSF-TNQLAWYQQKPGKAPKLLIYRVSSLQTGVPS 132
Query: 89 VTTVSELTKRNNLDFSISISNITPADAGTYYC 120
+ + SE + DF+++IS++ P D TYYC
Sbjct: 133 LFSGSE----SGTDFTLTISSLQPDDVATYYC 160
>gi|6453813 butyrophilin, subfamily 2, member A2 isoform a [Homo
sapiens]
Length = 523
Score = 43.1 bits (100), Expect = 1e-04
Identities = 40/139 (28%), Positives = 61/139 (43%), Gaps = 15/139 (10%)
Query: 4 PASWPH--LPSPFLLMTLLLGRLTGVAGEDELQVIQPEKSVSVAAGESATLRCAMT--SL 59
PA+ H LP+ LL+ LLL + V+ P + GE+ TLRC ++
Sbjct: 3 PAAALHFSLPASLLLLLLLLLLSLCALVSAQFTVVGPANPILAMVGENTTLRCHLSPEKN 62
Query: 60 IPVGPIMWFRGA--------GAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNIT 111
+ WFR GRE Q E + R+T VS+ R ++ ++ I N+T
Sbjct: 63 AEDMEVRWFRSQFSPAVFVYKGGRERTEEQMEEYRGRITFVSKDINRGSV--ALVIHNVT 120
Query: 112 PADAGTYYCVKFRKGSPDD 130
+ G Y C F++G D
Sbjct: 121 AQENGIYRCY-FQEGRSYD 138
>gi|5921461 butyrophilin, subfamily 2, member A1 isoform 1 precursor
[Homo sapiens]
Length = 527
Score = 42.4 bits (98), Expect = 2e-04
Identities = 39/132 (29%), Positives = 57/132 (43%), Gaps = 15/132 (11%)
Query: 9 HLPSPFLLMTLLLGRLTGVAGEDELQVIQPEKSVSVAAGESATLRCAMT--SLIPVGPIM 66
H P L+ LLL V+ + V+ P + GE+ TLRC ++ +
Sbjct: 8 HFSRPASLLLLLLSLCALVSAQ--FIVVGPTDPILATVGENTTLRCHLSPEKNAEDMEVR 65
Query: 67 WFRGA--------GAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTY 118
WFR GRE Q E + R T VS+ R ++ ++ I NIT + GTY
Sbjct: 66 WFRSQFSPAVFVYKGGRERTEEQMEEYRGRTTFVSKDISRGSV--ALVIHNITAQENGTY 123
Query: 119 YCVKFRKGSPDD 130
C F++G D
Sbjct: 124 RCY-FQEGRSYD 134
>gi|17975772 butyrophilin, subfamily 2, member A1 isoform 2
precursor [Homo sapiens]
Length = 334
Score = 42.4 bits (98), Expect = 2e-04
Identities = 39/132 (29%), Positives = 57/132 (43%), Gaps = 15/132 (11%)
Query: 9 HLPSPFLLMTLLLGRLTGVAGEDELQVIQPEKSVSVAAGESATLRCAMT--SLIPVGPIM 66
H P L+ LLL V+ + V+ P + GE+ TLRC ++ +
Sbjct: 8 HFSRPASLLLLLLSLCALVSAQ--FIVVGPTDPILATVGENTTLRCHLSPEKNAEDMEVR 65
Query: 67 WFRGA--------GAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTY 118
WFR GRE Q E + R T VS+ R ++ ++ I NIT + GTY
Sbjct: 66 WFRSQFSPAVFVYKGGRERTEEQMEEYRGRTTFVSKDISRGSV--ALVIHNITAQENGTY 123
Query: 119 YCVKFRKGSPDD 130
C F++G D
Sbjct: 124 RCY-FQEGRSYD 134
>gi|239755286 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 296
Score = 40.4 bits (93), Expect = 8e-04
Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 31/144 (21%)
Query: 2 PVPASWPH------LPSPFLLMTLLLGRLTGVAGEDELQVIQPEKSVSVAAGESATLRCA 55
P P S P + +P L+ LL+ L G ++Q+ Q S+S + G+ T+ C
Sbjct: 160 PPPTSQPQSGHSTEVRAPTQLLGLLVLWLPGA--RCDIQMTQSPSSLSASVGDRVTITCR 217
Query: 56 MTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNL-----------DFS 104
+ I + W Y QK G P++ + + ++ + D++
Sbjct: 218 ASQGIS-NNLNW-----------YQQKPGKTPKLLIYAASSLQSGIPSRFSDSGSGTDYT 265
Query: 105 ISISNITPADAGTYYCVKFRKGSP 128
++IS++ P D TYYC + SP
Sbjct: 266 LTISSLQPEDFATYYCQQSDSTSP 289
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.136 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,051,999
Number of Sequences: 37866
Number of extensions: 298933
Number of successful extensions: 1523
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 129
Number of HSP's that attempted gapping in prelim test: 1198
Number of HSP's gapped (non-prelim): 416
length of query: 181
length of database: 18,247,518
effective HSP length: 96
effective length of query: 85
effective length of database: 14,612,382
effective search space: 1242052470
effective search space used: 1242052470
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.