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Search of human proteins with 14249738
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|14249738 N-acetylglucosamine-1-phosphotransferase, gamma
subunit [Homo sapiens]
(305 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|14249738 N-acetylglucosamine-1-phosphotransferase, gamma subu... 634 0.0
gi|48255891 protein kinase C substrate 80K-H isoform 2 [Homo sap... 57 3e-08
gi|48255889 protein kinase C substrate 80K-H isoform 1 [Homo sap... 57 3e-08
gi|20070264 erlectin isoform 1 [Homo sapiens] 43 3e-04
gi|188528698 erlectin isoform 3 [Homo sapiens] 41 0.001
gi|188528696 erlectin isoform 2 [Homo sapiens] 40 0.003
gi|63252870 osteosarcoma amplified 9 isoform 4 precursor [Homo s... 38 0.013
gi|63252868 osteosarcoma amplified 9 isoform 3 precursor [Homo s... 38 0.013
gi|63252866 osteosarcoma amplified 9 isoform 2 precursor [Homo s... 38 0.013
gi|5803109 osteosarcoma amplified 9 isoform 1 precursor [Homo sa... 38 0.013
gi|124107606 killer cell immunoglobulin-like receptor, two domai... 30 2.0
gi|190358524 follistatin-like 5 isoform c [Homo sapiens] 30 2.0
gi|190358522 follistatin-like 5 isoform b [Homo sapiens] 30 2.0
gi|148612833 pellino 3 alpha isoform 2 [Homo sapiens] 30 2.0
gi|148612798 pellino 3 alpha isoform 1 [Homo sapiens] 30 2.0
gi|58530840 desmoplakin isoform I [Homo sapiens] 30 2.7
gi|188497689 chromatin licensing and DNA replication factor 1 [H... 30 3.5
gi|4758650 kinesin family member 5C [Homo sapiens] 29 4.5
gi|21536402 bridging integrator 1 isoform 2 [Homo sapiens] 29 4.5
gi|113722116 plexin A2 [Homo sapiens] 29 4.5
gi|166706897 olfactomedin 3 [Homo sapiens] 29 5.9
gi|145580631 quiescin Q6 sulfhydryl oxidase 2 [Homo sapiens] 28 7.7
gi|21361787 tetratricopeptide repeat domain 17 [Homo sapiens] 28 7.7
>gi|14249738 N-acetylglucosamine-1-phosphotransferase, gamma subunit
[Homo sapiens]
Length = 305
Score = 634 bits (1634), Expect = 0.0
Identities = 305/305 (100%), Positives = 305/305 (100%)
Query: 1 MAAGLARLLLLLGLSAGGPAPAGAAKMKVVEEPNAFGVNNPFLPQASRLQAKRDPSPVSG 60
MAAGLARLLLLLGLSAGGPAPAGAAKMKVVEEPNAFGVNNPFLPQASRLQAKRDPSPVSG
Sbjct: 1 MAAGLARLLLLLGLSAGGPAPAGAAKMKVVEEPNAFGVNNPFLPQASRLQAKRDPSPVSG 60
Query: 61 PVHLFRLSGKCFSLVESTYKYEFCPFHNVTQHEQTFRWNAYSGILGIWHEWEIANNTFTG 120
PVHLFRLSGKCFSLVESTYKYEFCPFHNVTQHEQTFRWNAYSGILGIWHEWEIANNTFTG
Sbjct: 61 PVHLFRLSGKCFSLVESTYKYEFCPFHNVTQHEQTFRWNAYSGILGIWHEWEIANNTFTG 120
Query: 121 MWMRDGDACRSRSRQSKVELACGKSNRLAHVSEPSTCVYALTFETPLVCHPHALLVYPTL 180
MWMRDGDACRSRSRQSKVELACGKSNRLAHVSEPSTCVYALTFETPLVCHPHALLVYPTL
Sbjct: 121 MWMRDGDACRSRSRQSKVELACGKSNRLAHVSEPSTCVYALTFETPLVCHPHALLVYPTL 180
Query: 181 PEALQRQWDQVEQDLADELITPQGHEKLLRTLFEDAGYLKTPEENEPTQLEGGPDSLGFE 240
PEALQRQWDQVEQDLADELITPQGHEKLLRTLFEDAGYLKTPEENEPTQLEGGPDSLGFE
Sbjct: 181 PEALQRQWDQVEQDLADELITPQGHEKLLRTLFEDAGYLKTPEENEPTQLEGGPDSLGFE 240
Query: 241 TLENCRKAHKELSKEIKRLKGLLTQHGIPYTRPTETSNLEHLGHETPRAKSPEQLRGDPG 300
TLENCRKAHKELSKEIKRLKGLLTQHGIPYTRPTETSNLEHLGHETPRAKSPEQLRGDPG
Sbjct: 241 TLENCRKAHKELSKEIKRLKGLLTQHGIPYTRPTETSNLEHLGHETPRAKSPEQLRGDPG 300
Query: 301 LRGSL 305
LRGSL
Sbjct: 301 LRGSL 305
>gi|48255891 protein kinase C substrate 80K-H isoform 2 [Homo
sapiens]
Length = 525
Score = 56.6 bits (135), Expect = 3e-08
Identities = 32/105 (30%), Positives = 46/105 (43%), Gaps = 5/105 (4%)
Query: 67 LSGKCFSLVESTYKYEFCPFHNVTQHEQTFRWNAYSGILGIWHEW-EIANNTFTGMWMRD 125
L +C+ L + Y Y CPF V+Q + LG W W ++ F+ M
Sbjct: 408 LYSQCYELTTNEYVYRLCPFKLVSQKPKL---GGSPTSLGTWGSWIGPDHDKFSAMKYEQ 464
Query: 126 GDAC-RSRSRQSKVELACGKSNRLAHVSEPSTCVYALTFETPLVC 169
G C + +R + V L CGK + +EPS C Y + TP C
Sbjct: 465 GTGCWQGPNRSTTVRLLCGKETMVTSTTEPSRCEYLMELMTPAAC 509
>gi|48255889 protein kinase C substrate 80K-H isoform 1 [Homo
sapiens]
Length = 528
Score = 56.6 bits (135), Expect = 3e-08
Identities = 32/105 (30%), Positives = 46/105 (43%), Gaps = 5/105 (4%)
Query: 67 LSGKCFSLVESTYKYEFCPFHNVTQHEQTFRWNAYSGILGIWHEW-EIANNTFTGMWMRD 125
L +C+ L + Y Y CPF V+Q + LG W W ++ F+ M
Sbjct: 411 LYSQCYELTTNEYVYRLCPFKLVSQKPKL---GGSPTSLGTWGSWIGPDHDKFSAMKYEQ 467
Query: 126 GDAC-RSRSRQSKVELACGKSNRLAHVSEPSTCVYALTFETPLVC 169
G C + +R + V L CGK + +EPS C Y + TP C
Sbjct: 468 GTGCWQGPNRSTTVRLLCGKETMVTSTTEPSRCEYLMELMTPAAC 512
>gi|20070264 erlectin isoform 1 [Homo sapiens]
Length = 483
Score = 43.1 bits (100), Expect = 3e-04
Identities = 36/129 (27%), Positives = 56/129 (43%), Gaps = 26/129 (20%)
Query: 67 LSGK-CFSLVESTYKYEFCPFHNVTQHEQTFRWNAYSGILGIWHEWE----IANNTFTGM 121
LSG CF +KYEFC +V Q+ + S ++G W++ E NT
Sbjct: 339 LSGSYCFRGGVGWWKYEFCYGKHVHQYHEDKDSGKTSVVVGTWNQEEHIEWAKKNTARAY 398
Query: 122 WMRD---------------GDAC--RSRSRQSKVELACGKSNR----LAHVSEPSTCVYA 160
++D GD C + RQ V+L C +S+ ++ EP +C Y
Sbjct: 399 HLQDDGTQTVRMVSHFYGNGDICDITDKPRQVTVKLKCKESDSPHAVTVYMLEPHSCQYI 458
Query: 161 LTFETPLVC 169
L E+P++C
Sbjct: 459 LGVESPVIC 467
Score = 30.4 bits (67), Expect = 2.0
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 6/55 (10%)
Query: 123 MRDGDAC---RSRSRQSKVELACGKSNR--LAHVSEPSTCVYALTFETPLVC-HP 171
M +G C ++R R S V C ++ + V+E +TC Y + TPL+C HP
Sbjct: 193 MGNGTPCSLKQNRPRSSTVMYICHPESKHEILSVAEVTTCEYEVVILTPLLCSHP 247
>gi|188528698 erlectin isoform 3 [Homo sapiens]
Length = 429
Score = 41.2 bits (95), Expect = 0.001
Identities = 31/116 (26%), Positives = 51/116 (43%), Gaps = 25/116 (21%)
Query: 79 YKYEFCPFHNVTQHEQTFRWNAYSGILGIWHEWE----IANNTFTGMWMRD--------- 125
+KYEFC +V Q+ + S ++G W++ E NT ++D
Sbjct: 298 WKYEFCYGKHVHQYHEDKDSGKTSVVVGTWNQEEHIEWAKKNTARAYHLQDDGTQTVRMV 357
Query: 126 ------GDAC--RSRSRQSKVELACGKSNR----LAHVSEPSTCVYALTFETPLVC 169
GD C + RQ V+L C +S+ ++ EP +C Y L E+P++C
Sbjct: 358 SHFYGNGDICDITDKPRQVTVKLKCKESDSPHAVTVYMLEPHSCQYILGVESPVIC 413
Score = 30.4 bits (67), Expect = 2.0
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 6/55 (10%)
Query: 123 MRDGDAC---RSRSRQSKVELACGKSNR--LAHVSEPSTCVYALTFETPLVC-HP 171
M +G C ++R R S V C ++ + V+E +TC Y + TPL+C HP
Sbjct: 193 MGNGTPCSLKQNRPRSSTVMYICHPESKHEILSVAEVTTCEYEVVILTPLLCSHP 247
>gi|188528696 erlectin isoform 2 [Homo sapiens]
Length = 457
Score = 39.7 bits (91), Expect = 0.003
Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 10/108 (9%)
Query: 67 LSGK-CFSLVESTYKYEFCPFHNVTQHEQTFRWNAYSGILGIWHEWE----IANNTFTGM 121
LSG CF +KYEFC +V Q+ + S ++G W++ E NT
Sbjct: 339 LSGSYCFRGGVGWWKYEFCYGKHVHQYHEDKDSGKTSVVVGTWNQEEHIEWAKKNTARAY 398
Query: 122 WMRDGDACRSRSRQSKVELACGKSNRLAHVSEPSTCVYALTFETPLVC 169
++D R ++S A ++ EP +C Y L E+P++C
Sbjct: 399 HLQDDGTQTVRCKESDSPHAV-----TVYMLEPHSCQYILGVESPVIC 441
Score = 30.4 bits (67), Expect = 2.0
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 6/55 (10%)
Query: 123 MRDGDAC---RSRSRQSKVELACGKSNR--LAHVSEPSTCVYALTFETPLVC-HP 171
M +G C ++R R S V C ++ + V+E +TC Y + TPL+C HP
Sbjct: 193 MGNGTPCSLKQNRPRSSTVMYICHPESKHEILSVAEVTTCEYEVVILTPLLCSHP 247
>gi|63252870 osteosarcoma amplified 9 isoform 4 precursor [Homo
sapiens]
Length = 652
Score = 37.7 bits (86), Expect = 0.013
Identities = 43/190 (22%), Positives = 68/190 (35%), Gaps = 47/190 (24%)
Query: 21 PAGAAKMKVVEEPNAFGVNNPFLPQASRLQAKRDPSPVSGPVHLFRLSGKCFSLVESTYK 80
PAGA + E P +P+ L RD C + +
Sbjct: 76 PAGAIHFQREREEETPAYQGPGIPEL--LSPMRD--------------APCLLKTKDWWT 119
Query: 81 YEFCPFHNVTQH-----------------EQTFRWNAYSGILGIWHEWEIANNTFTGMWM 123
YEFC ++ Q+ + F W+ + H + ++ G
Sbjct: 120 YEFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYG--- 176
Query: 124 RDGDAC--RSRSRQSKVELACGKSNRLA-----HVSEPSTCVYALTFETPLVCHPHALLV 176
+G C R R+++V C + ++ V EP +C Y LT TP +C PH LL
Sbjct: 177 -NGSKCDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRTPRLC-PHPLLR 234
Query: 177 YP--TLPEAL 184
P P+A+
Sbjct: 235 PPPSAAPQAI 244
>gi|63252868 osteosarcoma amplified 9 isoform 3 precursor [Homo
sapiens]
Length = 597
Score = 37.7 bits (86), Expect = 0.013
Identities = 43/190 (22%), Positives = 68/190 (35%), Gaps = 47/190 (24%)
Query: 21 PAGAAKMKVVEEPNAFGVNNPFLPQASRLQAKRDPSPVSGPVHLFRLSGKCFSLVESTYK 80
PAGA + E P +P+ L RD C + +
Sbjct: 76 PAGAIHFQREREEETPAYQGPGIPEL--LSPMRD--------------APCLLKTKDWWT 119
Query: 81 YEFCPFHNVTQH-----------------EQTFRWNAYSGILGIWHEWEIANNTFTGMWM 123
YEFC ++ Q+ + F W+ + H + ++ G
Sbjct: 120 YEFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYG--- 176
Query: 124 RDGDAC--RSRSRQSKVELACGKSNRLA-----HVSEPSTCVYALTFETPLVCHPHALLV 176
+G C R R+++V C + ++ V EP +C Y LT TP +C PH LL
Sbjct: 177 -NGSKCDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRTPRLC-PHPLLR 234
Query: 177 YP--TLPEAL 184
P P+A+
Sbjct: 235 PPPSAAPQAI 244
>gi|63252866 osteosarcoma amplified 9 isoform 2 precursor [Homo
sapiens]
Length = 612
Score = 37.7 bits (86), Expect = 0.013
Identities = 43/190 (22%), Positives = 68/190 (35%), Gaps = 47/190 (24%)
Query: 21 PAGAAKMKVVEEPNAFGVNNPFLPQASRLQAKRDPSPVSGPVHLFRLSGKCFSLVESTYK 80
PAGA + E P +P+ L RD C + +
Sbjct: 76 PAGAIHFQREREEETPAYQGPGIPEL--LSPMRD--------------APCLLKTKDWWT 119
Query: 81 YEFCPFHNVTQH-----------------EQTFRWNAYSGILGIWHEWEIANNTFTGMWM 123
YEFC ++ Q+ + F W+ + H + ++ G
Sbjct: 120 YEFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYG--- 176
Query: 124 RDGDAC--RSRSRQSKVELACGKSNRLA-----HVSEPSTCVYALTFETPLVCHPHALLV 176
+G C R R+++V C + ++ V EP +C Y LT TP +C PH LL
Sbjct: 177 -NGSKCDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRTPRLC-PHPLLR 234
Query: 177 YP--TLPEAL 184
P P+A+
Sbjct: 235 PPPSAAPQAI 244
>gi|5803109 osteosarcoma amplified 9 isoform 1 precursor [Homo
sapiens]
Length = 667
Score = 37.7 bits (86), Expect = 0.013
Identities = 43/190 (22%), Positives = 68/190 (35%), Gaps = 47/190 (24%)
Query: 21 PAGAAKMKVVEEPNAFGVNNPFLPQASRLQAKRDPSPVSGPVHLFRLSGKCFSLVESTYK 80
PAGA + E P +P+ L RD C + +
Sbjct: 76 PAGAIHFQREREEETPAYQGPGIPEL--LSPMRD--------------APCLLKTKDWWT 119
Query: 81 YEFCPFHNVTQH-----------------EQTFRWNAYSGILGIWHEWEIANNTFTGMWM 123
YEFC ++ Q+ + F W+ + H + ++ G
Sbjct: 120 YEFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYG--- 176
Query: 124 RDGDAC--RSRSRQSKVELACGKSNRLA-----HVSEPSTCVYALTFETPLVCHPHALLV 176
+G C R R+++V C + ++ V EP +C Y LT TP +C PH LL
Sbjct: 177 -NGSKCDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRTPRLC-PHPLLR 234
Query: 177 YP--TLPEAL 184
P P+A+
Sbjct: 235 PPPSAAPQAI 244
>gi|124107606 killer cell immunoglobulin-like receptor, two domains,
long cytoplasmic tail, 4 isoform a [Homo sapiens]
Length = 377
Score = 30.4 bits (67), Expect = 2.0
Identities = 37/151 (24%), Positives = 59/151 (39%), Gaps = 35/151 (23%)
Query: 162 TFETPLVCHPHALLVYPT-------LPEALQRQWDQVEQDLADELITPQGHEKLLRTLFE 214
+F+T + H HA++ Y LP L +W +++ A P GH + R E
Sbjct: 232 SFKTGIARHLHAVIRYSVAIILFTILPFFLLHRWCSKKKNAAVMNQEPAGHRTVNR---E 288
Query: 215 DAGYLKTPEENEPTQLEGGPDSLGFETLENCRKAHKELSKEIKRLKGLLTQHGIPYTRP- 273
D+ E P + + L++C ++++ +R K RP
Sbjct: 289 DSD-------------EQDPQEVTYAQLDHCIFTQRKITGPSQRSK-----------RPS 324
Query: 274 TETSNLEHLGHETPRAKSPEQLRGDPGLRGS 304
T+TS L + PRA SP L GS
Sbjct: 325 TDTSVCIELPNAEPRALSPAHEHHSQALMGS 355
>gi|190358524 follistatin-like 5 isoform c [Homo sapiens]
Length = 837
Score = 30.4 bits (67), Expect = 2.0
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 217 GYLKTPEENEPTQLEGGPDSLGFETLENCRKAHKELSKEIKRLKGLLTQHG 267
G++ E PT+ EGG ++ L R HKE ++E R+KG + Q G
Sbjct: 12 GFIFLESEGRPTK-EGGYGLKSYQPLMRLR--HKEKNQESSRVKGFMIQDG 59
>gi|190358522 follistatin-like 5 isoform b [Homo sapiens]
Length = 846
Score = 30.4 bits (67), Expect = 2.0
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 217 GYLKTPEENEPTQLEGGPDSLGFETLENCRKAHKELSKEIKRLKGLLTQHG 267
G++ E PT+ EGG ++ L R HKE ++E R+KG + Q G
Sbjct: 12 GFIFLESEGRPTK-EGGYGLKSYQPLMRLR--HKEKNQESSRVKGFMIQDG 59
>gi|148612833 pellino 3 alpha isoform 2 [Homo sapiens]
Length = 445
Score = 30.4 bits (67), Expect = 2.0
Identities = 28/83 (33%), Positives = 37/83 (44%), Gaps = 14/83 (16%)
Query: 106 GIWHEWEIANNTFTGMWMRDGDACRSRSRQSKVELACGKSNRLAHVSEPSTCVYALTFET 165
G+W E + N +T +RD SRS Q + +L +SN L S C L + T
Sbjct: 230 GVWREISVCGNVYT---LRD-----SRSAQQRGKLVENESNVLQDGSLIDLCGATLLWRT 281
Query: 166 PLVCHPHALLVYPTLPE-ALQRQ 187
P LL PTL + QRQ
Sbjct: 282 PA-----GLLRAPTLKQLEAQRQ 299
>gi|148612798 pellino 3 alpha isoform 1 [Homo sapiens]
Length = 469
Score = 30.4 bits (67), Expect = 2.0
Identities = 28/83 (33%), Positives = 37/83 (44%), Gaps = 14/83 (16%)
Query: 106 GIWHEWEIANNTFTGMWMRDGDACRSRSRQSKVELACGKSNRLAHVSEPSTCVYALTFET 165
G+W E + N +T +RD SRS Q + +L +SN L S C L + T
Sbjct: 254 GVWREISVCGNVYT---LRD-----SRSAQQRGKLVENESNVLQDGSLIDLCGATLLWRT 305
Query: 166 PLVCHPHALLVYPTLPE-ALQRQ 187
P LL PTL + QRQ
Sbjct: 306 PA-----GLLRAPTLKQLEAQRQ 323
>gi|58530840 desmoplakin isoform I [Homo sapiens]
Length = 2871
Score = 30.0 bits (66), Expect = 2.7
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 17/92 (18%)
Query: 182 EALQRQWD------QVEQDLADELITPQGHEKLLRTLFE-DAGYLKTPEENEPTQLEGGP 234
E +R+W+ +V + +E+I+ L+ FE + KT Q E
Sbjct: 1336 EEAKRRWEYENELSKVRNNYDEEIIS-------LKNQFETEINITKTTIHQLTMQKE--E 1386
Query: 235 DSLGFET-LENCRKAHKELSKEIKRLKGLLTQ 265
D+ G+ ++N + ++ LS+EIKRLK LTQ
Sbjct: 1387 DTSGYRAQIDNLTRENRSLSEEIKRLKNTLTQ 1418
>gi|188497689 chromatin licensing and DNA replication factor 1 [Homo
sapiens]
Length = 546
Score = 29.6 bits (65), Expect = 3.5
Identities = 22/83 (26%), Positives = 30/83 (36%), Gaps = 1/83 (1%)
Query: 221 TPEENEPTQLEGGPDSLGFETLENCRKAHKELSKEIKRLKGLLTQHGIPYTRPTETSNLE 280
TP +P L D L +C + +EL ++ LK G T E E
Sbjct: 102 TPAAGQPPHLTSAQDQDTISELASCLQRARELGARVRALKASAQDAGESCTPEAEGRPEE 161
Query: 281 HLGHETPRAKSPEQLRGDPGLRG 303
G + P + L PGL G
Sbjct: 162 PCGEKAPAYQRFHAL-AQPGLPG 183
>gi|4758650 kinesin family member 5C [Homo sapiens]
Length = 957
Score = 29.3 bits (64), Expect = 4.5
Identities = 31/129 (24%), Positives = 56/129 (43%), Gaps = 10/129 (7%)
Query: 133 SRQSKVELACGKSNRLAHVSEPSTCVYALTFETPLVCHPHALLVYPTLPEALQRQWDQVE 192
+R ++E A SNR + SE L +L Y E +RQ ++ +
Sbjct: 603 NRSKQLESAQMDSNRKMNASERELAACQLLISQH-EAKIKSLTDYMQNMEQKRRQLEESQ 661
Query: 193 QDLADELITPQGHEKLLRTLFEDAGYLKTPEENEPTQLEGGPDSLGFETLENCRKAHKEL 252
L++EL + EK+ F+D E+ T+L+ + + LE ++H+E
Sbjct: 662 DSLSEELAKLRAQEKMHEVSFQD------KEKEHLTRLQDAEEMK--KALEQQMESHREA 713
Query: 253 -SKEIKRLK 260
K++ RL+
Sbjct: 714 HQKQLSRLR 722
>gi|21536402 bridging integrator 1 isoform 2 [Homo sapiens]
Length = 550
Score = 29.3 bits (64), Expect = 4.5
Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Query: 19 PAPAGAAK--MKVVEEPNAFGVNNPFLPQASRLQAKRDP-SPVSGPVHLFRLSGK 70
P PAG A + + P+ F PF QAS L DP PV+ PV SG+
Sbjct: 316 PEPAGGATPGATLPKSPSQFEAPGPFSEQASLLDLDFDPLPPVTSPVKAPTPSGQ 370
>gi|113722116 plexin A2 [Homo sapiens]
Length = 1894
Score = 29.3 bits (64), Expect = 4.5
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 218 YLKTPEENEPT--QLEGGPDSLGFETLENCRKAHKELSKEIKRLKGLLTQHGIPY 270
Y + EN+ T +L+ D+L C++A EL +I L L + GIPY
Sbjct: 1260 YKRKSRENDLTLKRLQMQMDNLESRVALECKEAFAELQTDINELTSDLDRSGIPY 1314
>gi|166706897 olfactomedin 3 [Homo sapiens]
Length = 458
Score = 28.9 bits (63), Expect = 5.9
Identities = 14/38 (36%), Positives = 18/38 (47%)
Query: 72 FSLVESTYKYEFCPFHNVTQHEQTFRWNAYSGILGIWH 109
+S STY+Y PFHN H +NA L W+
Sbjct: 400 YSTKTSTYEYTDIPFHNQYFHISMLDYNARDRALYAWN 437
>gi|145580631 quiescin Q6 sulfhydryl oxidase 2 [Homo sapiens]
Length = 698
Score = 28.5 bits (62), Expect = 7.7
Identities = 14/26 (53%), Positives = 18/26 (69%)
Query: 2 AAGLARLLLLLGLSAGGPAPAGAAKM 27
AA L RLL+LL +A GP GAA++
Sbjct: 30 AARLPRLLVLLAAAAVGPGAGGAARL 55
>gi|21361787 tetratricopeptide repeat domain 17 [Homo sapiens]
Length = 1141
Score = 28.5 bits (62), Expect = 7.7
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 158 VYALT--FETPLVCHPHALLVYPTLPEALQRQWDQVEQDLADELITPQGHEKLLRTLFED 215
+YA+ + ++C+ HAL P +A++R+ + Q ++ + Q H L RTL E
Sbjct: 304 IYAMLGEYNHSVLCYDHALQARPGFEQAIKRKHAVLCQQKLEQKLEAQ-HRSLQRTLNEL 362
Query: 216 AGYLK 220
Y K
Sbjct: 363 KEYQK 367
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.134 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,762,384
Number of Sequences: 37866
Number of extensions: 671190
Number of successful extensions: 1953
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 1934
Number of HSP's gapped (non-prelim): 30
length of query: 305
length of database: 18,247,518
effective HSP length: 102
effective length of query: 203
effective length of database: 14,385,186
effective search space: 2920192758
effective search space used: 2920192758
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.