Search of human proteins with 14249720

Search of human proteins with 14249720

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|14249720 transmembrane protein 128 [Homo sapiens]
         (141 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|14249720 transmembrane protein 128 [Homo sapiens]                  296   3e-81
gi|27436953 ATP-binding cassette, sub-family A, member 6 [Homo s...    31   0.39 
gi|52546683 olfactory receptor, family 5, subfamily AC, member 2...    30   0.86 
gi|68051721 arylacetamide deacetylase-like 1 isoform b [Homo sap...    29   1.1  
gi|24308213 serine incorporator 1 [Homo sapiens]                       28   1.9  
gi|4758326 coagulation factor II (thrombin) receptor-like 2 prec...    28   2.5  
gi|169178090 PREDICTED: similar to hCG1784562 [Homo sapiens]           28   3.3  
gi|169179398 PREDICTED: similar to hCG1784562 [Homo sapiens]           28   3.3  
gi|169181282 PREDICTED: similar to hCG1784562 [Homo sapiens]           28   3.3  
gi|188528618 solute carrier family 6 (neurotransmitter transport...    27   5.6  
gi|30794372 polybromo 1 isoform 1 [Homo sapiens]                       27   5.6  
gi|93102371 polybromo 1 isoform 2 [Homo sapiens]                       27   5.6  
gi|41281917 polybromo 1 isoform 4 [Homo sapiens]                       27   5.6  
gi|4885307 G protein-coupled receptor 21 [Homo sapiens]                27   5.6  
gi|90991712 CD207 antigen, langerin [Homo sapiens]                     27   7.3  
gi|52145305 patched 2 [Homo sapiens]                                   26   9.5  
gi|190358512 transmembrane protein 184C [Homo sapiens]                 26   9.5  

>gi|14249720 transmembrane protein 128 [Homo sapiens]
          Length = 141

 Score =  296 bits (759), Expect = 3e-81
 Identities = 141/141 (100%), Positives = 141/141 (100%)

Query: 1   MPPFGYKTETSTAVEKKEKPLPRLNIHSGFWILASIVVTYYVDFFKTLKENFHTSSWFLC 60
           MPPFGYKTETSTAVEKKEKPLPRLNIHSGFWILASIVVTYYVDFFKTLKENFHTSSWFLC
Sbjct: 1   MPPFGYKTETSTAVEKKEKPLPRLNIHSGFWILASIVVTYYVDFFKTLKENFHTSSWFLC 60

Query: 61  GSALLLVSLSIAFYCIVYLEWYCGIGEYDVKYPALIPITTASFIAAGICFNIALWHVWSF 120
           GSALLLVSLSIAFYCIVYLEWYCGIGEYDVKYPALIPITTASFIAAGICFNIALWHVWSF
Sbjct: 61  GSALLLVSLSIAFYCIVYLEWYCGIGEYDVKYPALIPITTASFIAAGICFNIALWHVWSF 120

Query: 121 FTPLLLFTQFMGVVMFITLLG 141
           FTPLLLFTQFMGVVMFITLLG
Sbjct: 121 FTPLLLFTQFMGVVMFITLLG 141


>gi|27436953 ATP-binding cassette, sub-family A, member 6 [Homo
            sapiens]
          Length = 1617

 Score = 30.8 bits (68), Expect = 0.39
 Identities = 32/147 (21%), Positives = 56/147 (38%), Gaps = 32/147 (21%)

Query: 14   VEKKEKPLPRLNIHSG--------FWILASIVVTYYVDFFKTLKENFHTSSW-------- 57
            +E    PL  + + +G        F +L SI     +      K+N  +  W        
Sbjct: 997  IESSPFPLSHIGLWTGLPDGSFFLFLVLCSISPYITMGSISDYKKNAKSQLWISGLYTSA 1056

Query: 58   FLCGSALLLVSLSIAFYCIVYLEWYCGIGEYDVKYPALI---PITTASFIAAGICF---- 110
            + CG AL+ VS  I    ++YL +Y    +Y +    ++    I T  + A+ + F    
Sbjct: 1057 YWCGQALVDVSFFILILLLMYLIFYIENMQYLLITSQIVFALVIVTPGYAASLVFFIYMI 1116

Query: 111  ---------NIALWHVWSFFTPLLLFT 128
                     N  LW  + FF   ++F+
Sbjct: 1117 SFIFRKRRKNSGLWSFYFFFASTIMFS 1143


>gi|52546683 olfactory receptor, family 5, subfamily AC, member 2
           [Homo sapiens]
          Length = 309

 Score = 29.6 bits (65), Expect = 0.86
 Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 8/74 (10%)

Query: 33  LASIVVTY---YVDFFKTLKENFHTSSWFLCGSALLLVSLSIAFYCIVYLEWYCGIGE-- 87
           L +I+++Y     D  K   E   + ++  CG+ LL VSL       +Y+    G+ E  
Sbjct: 213 LMTIIISYTRVLFDILKKKSEKGRSKAFSTCGAHLLSVSLYYGTLIFMYVRPASGLAEDQ 272

Query: 88  ---YDVKYPALIPI 98
              Y + Y  +IP+
Sbjct: 273 DKVYSLFYTIIIPL 286


>gi|68051721 arylacetamide deacetylase-like 1 isoform b [Homo
           sapiens]
          Length = 440

 Score = 29.3 bits (64), Expect = 1.1
 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 2/40 (5%)

Query: 16  KKEKPLPR--LNIHSGFWILASIVVTYYVDFFKTLKENFH 53
           K E+PL R  + IH G W LAS  + YY +    + E  +
Sbjct: 132 KPEEPLKRSVVYIHGGGWALASAKIRYYDELCTAMAEELN 171


>gi|24308213 serine incorporator 1 [Homo sapiens]
          Length = 453

 Score = 28.5 bits (62), Expect = 1.9
 Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 4/52 (7%)

Query: 14  VEKKEKPLPRLNIHSGFWI--LASIVVTYYVDFFKTLKENFHTSSWFLCGSA 63
           ++ K    PR  +H+GFW    A+ +      FF  + E   T+ WF  G A
Sbjct: 109 IKVKSSSDPRAAVHNGFWFFKFAAAIAIIIGAFF--IPEGTFTTVWFYVGMA 158


>gi|4758326 coagulation factor II (thrombin) receptor-like 2
           precursor [Homo sapiens]
          Length = 374

 Score = 28.1 bits (61), Expect = 2.5
 Identities = 14/45 (31%), Positives = 22/45 (48%)

Query: 29  GFWILASIVVTYYVDFFKTLKENFHTSSWFLCGSALLLVSLSIAF 73
           GF I   +++  Y    +TL    H   W++  S L+LV  +I F
Sbjct: 270 GFLIPFVLIIYCYAAIIRTLNAYDHRWLWYVKASLLILVIFTICF 314


>gi|169178090 PREDICTED: similar to hCG1784562 [Homo sapiens]
          Length = 316

 Score = 27.7 bits (60), Expect = 3.3
 Identities = 10/28 (35%), Positives = 16/28 (57%)

Query: 65  LLVSLSIAFYCIVYLEWYCGIGEYDVKY 92
           +L   +  F C  +L WY G G +DV++
Sbjct: 275 ILEQFTAKFRCKAFLSWYSGKGMHDVEF 302


>gi|169179398 PREDICTED: similar to hCG1784562 [Homo sapiens]
          Length = 316

 Score = 27.7 bits (60), Expect = 3.3
 Identities = 10/28 (35%), Positives = 16/28 (57%)

Query: 65  LLVSLSIAFYCIVYLEWYCGIGEYDVKY 92
           +L   +  F C  +L WY G G +DV++
Sbjct: 275 ILEQFTAKFRCKAFLSWYSGKGMHDVEF 302


>gi|169181282 PREDICTED: similar to hCG1784562 [Homo sapiens]
          Length = 316

 Score = 27.7 bits (60), Expect = 3.3
 Identities = 10/28 (35%), Positives = 16/28 (57%)

Query: 65  LLVSLSIAFYCIVYLEWYCGIGEYDVKY 92
           +L   +  F C  +L WY G G +DV++
Sbjct: 275 ILEQFTAKFRCKAFLSWYSGKGMHDVEF 302


>gi|188528618 solute carrier family 6 (neurotransmitter transporter,
           GABA), member 1 [Homo sapiens]
          Length = 599

 Score = 26.9 bits (58), Expect = 5.6
 Identities = 22/103 (21%), Positives = 42/103 (40%), Gaps = 14/103 (13%)

Query: 31  WILASIVVTYYVDFFKTLKENFHTSSWFLCGSALLLVSLSIAFYCIVYLEWYCGIGE-YD 89
           +I A  +++Y +      +   +    F   SA  +  L + F+  V + W+ G+   YD
Sbjct: 423 FIAAVCIISYLIGLSNITQGGIYVFKLFDYYSASGMSLLFLVFFECVSISWFYGVNRFYD 482

Query: 90  VKYPALIPITTASFIAAGICFNIALWHV-WSFFTPLLLFTQFM 131
                         + +  C     W + WSFFTP+++   F+
Sbjct: 483 ---------NIQEMVGSRPCI---WWKLCWSFFTPIIVAGVFI 513


>gi|30794372 polybromo 1 isoform 1 [Homo sapiens]
          Length = 1602

 Score = 26.9 bits (58), Expect = 5.6
 Identities = 12/31 (38%), Positives = 16/31 (51%)

Query: 32   ILASIVVTYYVDFFKTLKENFHTSSWFLCGS 62
            IL   VV +  ++FK   ENF     F+C S
Sbjct: 999  ILGKCVVMFVKEYFKLCPENFRDEDVFVCES 1029


>gi|93102371 polybromo 1 isoform 2 [Homo sapiens]
          Length = 1582

 Score = 26.9 bits (58), Expect = 5.6
 Identities = 12/31 (38%), Positives = 16/31 (51%)

Query: 32   ILASIVVTYYVDFFKTLKENFHTSSWFLCGS 62
            IL   VV +  ++FK   ENF     F+C S
Sbjct: 1006 ILGKCVVMFVKEYFKLCPENFRDEDVFVCES 1036


>gi|41281917 polybromo 1 isoform 4 [Homo sapiens]
          Length = 1582

 Score = 26.9 bits (58), Expect = 5.6
 Identities = 12/31 (38%), Positives = 16/31 (51%)

Query: 32   ILASIVVTYYVDFFKTLKENFHTSSWFLCGS 62
            IL   VV +  ++FK   ENF     F+C S
Sbjct: 1031 ILGKCVVMFVKEYFKLCPENFRDEDVFVCES 1061


>gi|4885307 G protein-coupled receptor 21 [Homo sapiens]
          Length = 349

 Score = 26.9 bits (58), Expect = 5.6
 Identities = 11/39 (28%), Positives = 20/39 (51%)

Query: 40  YYVDFFKTLKENFHTSSWFLCGSALLLVSLSIAFYCIVY 78
           Y+ D F+   E++HT S+F     ++L + +    C  Y
Sbjct: 173 YHGDVFQWCAESWHTDSYFTLFIVMMLYAPAALIVCFTY 211


>gi|90991712 CD207 antigen, langerin [Homo sapiens]
          Length = 328

 Score = 26.6 bits (57), Expect = 7.3
 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)

Query: 93  PALIPITTASFIAAGICFNIALWHVWSFFTPLLLFTQFMGVV 134
           P+L+P  T +  AA IC  + L  V S     +L+ +FMG +
Sbjct: 32  PSLVPGKTPTVRAALICLTLVL--VASVLLQAVLYPRFMGTI 71


>gi|52145305 patched 2 [Homo sapiens]
          Length = 1203

 Score = 26.2 bits (56), Expect = 9.5
 Identities = 15/58 (25%), Positives = 23/58 (39%), Gaps = 6/58 (10%)

Query: 69  LSIAFYCIVYLEWYCGIGEYDVKYPALIPITTASFIAAGIC------FNIALWHVWSF 120
           L +A+ C+  L W C   +  V    ++ +  A     G+C      FN A   V  F
Sbjct: 404 LMLAYACVTMLRWDCAQSQGSVGLAGVLLVALAVASGLGLCALLGITFNAATTQVLPF 461


>gi|190358512 transmembrane protein 184C [Homo sapiens]
          Length = 438

 Score = 26.2 bits (56), Expect = 9.5
 Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 11/57 (19%)

Query: 31 WILASIVVTYYVDF----------FKTLKENFHTSSWFLCGSALLLVSLSIAFYCIV 77
          WI   + V Y V             + L+   HT +WF+ G   LL+++ I+ + I+
Sbjct: 13 WIRPLVAVIYLVSIVVAVPLCVWELQKLEVGIHTKAWFIAG-IFLLLTIPISLWVIL 68


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.330    0.143    0.481 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,186,080
Number of Sequences: 37866
Number of extensions: 189050
Number of successful extensions: 573
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 563
Number of HSP's gapped (non-prelim): 18
length of query: 141
length of database: 18,247,518
effective HSP length: 92
effective length of query: 49
effective length of database: 14,763,846
effective search space: 723428454
effective search space used: 723428454
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.