Search of human proteins with 14196462

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|14196462 protocadherin gamma subfamily A, 2 isoform 2
precursor [Homo sapiens]
         (823 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|14196462 protocadherin gamma subfamily A, 2 isoform 2 precurs...  1615   0.0  
gi|11056030 protocadherin gamma subfamily A, 2 isoform 1 precurs...  1588   0.0  
gi|14196465 protocadherin gamma subfamily A, 3 isoform 2 precurs...  1177   0.0  
gi|14589880 protocadherin gamma subfamily A, 3 isoform 1 precurs...  1175   0.0  
gi|14196459 protocadherin gamma subfamily A, 1 isoform 2 precurs...  1164   0.0  
gi|11056032 protocadherin gamma subfamily A, 1 isoform 1 precurs...  1163   0.0  
gi|14196474 protocadherin gamma subfamily A, 6 isoform 2 precurs...  1135   0.0  
gi|14196471 protocadherin gamma subfamily A, 5 isoform 2 precurs...  1135   0.0  
gi|11056065 protocadherin gamma subfamily A, 6 isoform 1 precurs...  1134   0.0  
gi|11128041 protocadherin gamma subfamily A, 10 isoform 1 precur...  1134   0.0  
gi|14196448 protocadherin gamma subfamily A, 10 isoform 2 precur...  1134   0.0  
gi|11056024 protocadherin gamma subfamily A, 5 isoform 1 precurs...  1130   0.0  
gi|11056026 protocadherin gamma subfamily A, 4 isoform 1 precurs...  1122   0.0  
gi|14196468 protocadherin gamma subfamily A, 4 isoform 2 precurs...  1120   0.0  
gi|11056063 protocadherin gamma subfamily A, 7 isoform 1 precurs...  1117   0.0  
gi|14196477 protocadherin gamma subfamily A, 7 isoform 2 precurs...  1117   0.0  
gi|7662056 protocadherin gamma subfamily A, 8 isoform 2 precurso...  1091   0.0  
gi|14270484 protocadherin gamma subfamily A, 8 isoform 1 precurs...  1089   0.0  
gi|14196457 protocadherin gamma subfamily A, 12 isoform 2 precur...  1087   0.0  
gi|8850232 protocadherin gamma subfamily A, 12 isoform 1 precurs...  1086   0.0  
gi|14196451 protocadherin gamma subfamily A, 11 isoform 2 precur...  1061   0.0  
gi|11128039 protocadherin gamma subfamily A, 11 isoform 1 precur...  1060   0.0  
gi|11128043 protocadherin gamma subfamily A, 9 isoform 1 precurs...  1053   0.0  
gi|14270487 protocadherin gamma subfamily A, 9 isoform 2 precurs...  1053   0.0  
gi|14196455 protocadherin gamma subfamily A, 11 isoform 3 precur...   798   0.0  
gi|9256610 protocadherin beta 15 precursor [Homo sapiens]             673   0.0  
gi|14270499 protocadherin gamma subfamily B, 4 isoform 2 precurs...   665   0.0  
gi|13470082 protocadherin gamma subfamily B, 4 isoform 1 precurs...   665   0.0  
gi|14270490 protocadherin gamma subfamily B, 1 isoform 2 precurs...   663   0.0  
gi|11128029 protocadherin gamma subfamily B, 6 isoform 1 precurs...   663   0.0  

>gi|14196462 protocadherin gamma subfamily A, 2 isoform 2 precursor
           [Homo sapiens]
          Length = 823

 Score = 1615 bits (4182), Expect = 0.0
 Identities = 823/823 (100%), Positives = 823/823 (100%)

Query: 1   MAALQKLPHCRKLVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALA 60
           MAALQKLPHCRKLVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALA
Sbjct: 1   MAALQKLPHCRKLVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALA 60

Query: 61  EQGVRIVSRGRSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVE 120
           EQGVRIVSRGRSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVE
Sbjct: 61  EQGVRIVSRGRSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVE 120

Query: 121 VEITDINDNAPRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSL 180
           VEITDINDNAPRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSL
Sbjct: 121 VEITDINDNAPRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSL 180

Query: 181 DVRRGADGNKYPELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAP 240
           DVRRGADGNKYPELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAP
Sbjct: 181 DVRRGADGNKYPELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAP 240

Query: 241 VFTQPEYRISIPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGE 300
           VFTQPEYRISIPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGE
Sbjct: 241 VFTQPEYRISIPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGE 300

Query: 301 LTIIKDLDYEDATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDS 360
           LTIIKDLDYEDATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDS
Sbjct: 301 LTIIKDLDYEDATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDS 360

Query: 361 LPGTIIGLFNVHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNI 420
           LPGTIIGLFNVHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNI
Sbjct: 361 LPGTIIGLFNVHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNI 420

Query: 421 TLTAKDGGNPSLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPD 480
           TLTAKDGGNPSLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPD
Sbjct: 421 TLTAKDGGNPSLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPD 480

Query: 481 SNDNAHVTYSFAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNP 540
           SNDNAHVTYSFAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNP
Sbjct: 481 SNDNAHVTYSFAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNP 540

Query: 541 PLSSNVSLSLFVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
           PLSSNVSLSLFVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600

Query: 601 NAWLSYHLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTL 660
           NAWLSYHLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTL
Sbjct: 601 NAWLSYHLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTL 660

Query: 661 TVAVADRIPDILADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWH 720
           TVAVADRIPDILADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWH
Sbjct: 661 TVAVADRIPDILADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWH 720

Query: 721 KSRLLQASGGSLTGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
           KSRLLQASGGSLTGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI
Sbjct: 721 KSRLLQASGGSLTGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780

Query: 781 SQESCEKKDFLSAPQSLLEEEREETFSQVIYLFTTYVLASLLK 823
           SQESCEKKDFLSAPQSLLEEEREETFSQVIYLFTTYVLASLLK
Sbjct: 781 SQESCEKKDFLSAPQSLLEEEREETFSQVIYLFTTYVLASLLK 823


>gi|11056030 protocadherin gamma subfamily A, 2 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score = 1588 bits (4111), Expect = 0.0
 Identities = 808/808 (100%), Positives = 808/808 (100%)

Query: 1   MAALQKLPHCRKLVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALA 60
           MAALQKLPHCRKLVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALA
Sbjct: 1   MAALQKLPHCRKLVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALA 60

Query: 61  EQGVRIVSRGRSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVE 120
           EQGVRIVSRGRSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVE
Sbjct: 61  EQGVRIVSRGRSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVE 120

Query: 121 VEITDINDNAPRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSL 180
           VEITDINDNAPRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSL
Sbjct: 121 VEITDINDNAPRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSL 180

Query: 181 DVRRGADGNKYPELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAP 240
           DVRRGADGNKYPELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAP
Sbjct: 181 DVRRGADGNKYPELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAP 240

Query: 241 VFTQPEYRISIPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGE 300
           VFTQPEYRISIPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGE
Sbjct: 241 VFTQPEYRISIPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGE 300

Query: 301 LTIIKDLDYEDATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDS 360
           LTIIKDLDYEDATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDS
Sbjct: 301 LTIIKDLDYEDATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDS 360

Query: 361 LPGTIIGLFNVHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNI 420
           LPGTIIGLFNVHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNI
Sbjct: 361 LPGTIIGLFNVHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNI 420

Query: 421 TLTAKDGGNPSLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPD 480
           TLTAKDGGNPSLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPD
Sbjct: 421 TLTAKDGGNPSLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPD 480

Query: 481 SNDNAHVTYSFAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNP 540
           SNDNAHVTYSFAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNP
Sbjct: 481 SNDNAHVTYSFAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNP 540

Query: 541 PLSSNVSLSLFVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
           PLSSNVSLSLFVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600

Query: 601 NAWLSYHLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTL 660
           NAWLSYHLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTL
Sbjct: 601 NAWLSYHLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTL 660

Query: 661 TVAVADRIPDILADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWH 720
           TVAVADRIPDILADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWH
Sbjct: 661 TVAVADRIPDILADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWH 720

Query: 721 KSRLLQASGGSLTGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
           KSRLLQASGGSLTGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI
Sbjct: 721 KSRLLQASGGSLTGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780

Query: 781 SQESCEKKDFLSAPQSLLEEEREETFSQ 808
           SQESCEKKDFLSAPQSLLEEEREETFSQ
Sbjct: 781 SQESCEKKDFLSAPQSLLEEEREETFSQ 808


>gi|14196465 protocadherin gamma subfamily A, 3 isoform 2 precursor
           [Homo sapiens]
          Length = 829

 Score = 1177 bits (3044), Expect = 0.0
 Identities = 604/799 (75%), Positives = 667/799 (83%)

Query: 11  RKLVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALAEQGVRIVSRG 70
           R L LLC LL TL E  +GQIRYSV EE+D+GSFVGNIA DLGLEP  LAE+GVRIVSRG
Sbjct: 11  RGLALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRG 70

Query: 71  RSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVEVEITDINDNA 130
           R+QLF+LNP+SGSLVTA RIDREELCAQ   CL+  NIL+EDKL I+ VE+EI DINDNA
Sbjct: 71  RTQLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNA 130

Query: 131 PRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSLDVRRGADGNK 190
           P F  EELE+KI E T PG R P+K A D DVG N+LQ Y L+PND+FSL V   ++G K
Sbjct: 131 PNFPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAK 190

Query: 191 YPELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAPVFTQPEYRIS 250
           YPELVLER+LDRE++ +H LVLVASDGGDPV SG   I V VLDANDN P+FTQPEYR+S
Sbjct: 191 YPELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVS 250

Query: 251 IPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGELTIIKDLDYE 310
           + EN  VGTR+LTV ATD DEG+ AQV Y L+K PG+ +E+F L S SGE++I+K LDYE
Sbjct: 251 VWENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYE 310

Query: 311 DATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDSLPGTIIGLFN 370
           DA F+EI IEAQDGPGLL+RAK++VTVLDVNDNAPE  +TS TSSV E+   G  I L +
Sbjct: 311 DAMFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALID 370

Query: 371 VHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNITLTAKDGGNP 430
           VHDRDSGQN      +  +LPFKLEKS+D YYRLVT  +LDREQ S YNI+L A DGG+P
Sbjct: 371 VHDRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSP 430

Query: 431 SLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPDSNDNAHVTYS 490
            LST+ HI L V DINDN P F   SYS YIPENNPRGAS+FSVTA DPDSN+NA +TY+
Sbjct: 431 PLSTETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYA 490

Query: 491 FAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNPPLSSNVSLSL 550
             EDT+QGAPLSS++SINS+TGVLYALRSFDYEQ RDL++ V A DSGNPPLSSNVSL+L
Sbjct: 491 LTEDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNL 550

Query: 551 FVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYHLLK 610
           FVLDQNDNAPEILYPA PTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSY LLK
Sbjct: 551 FVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLK 610

Query: 611 ASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTLTVAVADRIPD 670
           ASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVA+QDHGQPPLSATVTLTVAVADRIPD
Sbjct: 611 ASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPD 670

Query: 671 ILADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGG 730
           ILADLGSLEPSA PNDSDLTLYLVVAVAAVSCVFLAFVIVLLA RLRRWHKSRLLQASGG
Sbjct: 671 ILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGG 730

Query: 731 SLTGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKKDF 790
            L     SHFVG DGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEK + 
Sbjct: 731 GLASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSEP 790

Query: 791 LSAPQSLLEEEREETFSQV 809
           L   Q LLE + +    QV
Sbjct: 791 LLITQDLLEMKGDSNLLQV 809


>gi|14589880 protocadherin gamma subfamily A, 3 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score = 1175 bits (3040), Expect = 0.0
 Identities = 603/798 (75%), Positives = 666/798 (83%)

Query: 11  RKLVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALAEQGVRIVSRG 70
           R L LLC LL TL E  +GQIRYSV EE+D+GSFVGNIA DLGLEP  LAE+GVRIVSRG
Sbjct: 11  RGLALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRG 70

Query: 71  RSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVEVEITDINDNA 130
           R+QLF+LNP+SGSLVTA RIDREELCAQ   CL+  NIL+EDKL I+ VE+EI DINDNA
Sbjct: 71  RTQLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNA 130

Query: 131 PRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSLDVRRGADGNK 190
           P F  EELE+KI E T PG R P+K A D DVG N+LQ Y L+PND+FSL V   ++G K
Sbjct: 131 PNFPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAK 190

Query: 191 YPELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAPVFTQPEYRIS 250
           YPELVLER+LDRE++ +H LVLVASDGGDPV SG   I V VLDANDN P+FTQPEYR+S
Sbjct: 191 YPELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVS 250

Query: 251 IPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGELTIIKDLDYE 310
           + EN  VGTR+LTV ATD DEG+ AQV Y L+K PG+ +E+F L S SGE++I+K LDYE
Sbjct: 251 VWENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYE 310

Query: 311 DATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDSLPGTIIGLFN 370
           DA F+EI IEAQDGPGLL+RAK++VTVLDVNDNAPE  +TS TSSV E+   G  I L +
Sbjct: 311 DAMFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALID 370

Query: 371 VHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNITLTAKDGGNP 430
           VHDRDSGQN      +  +LPFKLEKS+D YYRLVT  +LDREQ S YNI+L A DGG+P
Sbjct: 371 VHDRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSP 430

Query: 431 SLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPDSNDNAHVTYS 490
            LST+ HI L V DINDN P F   SYS YIPENNPRGAS+FSVTA DPDSN+NA +TY+
Sbjct: 431 PLSTETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYA 490

Query: 491 FAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNPPLSSNVSLSL 550
             EDT+QGAPLSS++SINS+TGVLYALRSFDYEQ RDL++ V A DSGNPPLSSNVSL+L
Sbjct: 491 LTEDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNL 550

Query: 551 FVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYHLLK 610
           FVLDQNDNAPEILYPA PTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSY LLK
Sbjct: 551 FVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLK 610

Query: 611 ASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTLTVAVADRIPD 670
           ASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVA+QDHGQPPLSATVTLTVAVADRIPD
Sbjct: 611 ASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPD 670

Query: 671 ILADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGG 730
           ILADLGSLEPSA PNDSDLTLYLVVAVAAVSCVFLAFVIVLLA RLRRWHKSRLLQASGG
Sbjct: 671 ILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGG 730

Query: 731 SLTGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKKDF 790
            L     SHFVG DGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEK + 
Sbjct: 731 GLASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSEP 790

Query: 791 LSAPQSLLEEEREETFSQ 808
           L   Q LLE + +    Q
Sbjct: 791 LLITQDLLEMKGDSNLLQ 808


>gi|14196459 protocadherin gamma subfamily A, 1 isoform 2 precursor
           [Homo sapiens]
          Length = 823

 Score = 1164 bits (3012), Expect = 0.0
 Identities = 589/809 (72%), Positives = 674/809 (83%), Gaps = 1/809 (0%)

Query: 1   MAALQKLPHCRKLVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALA 60
           M   +KL  C +L+LLC  L  L EA AG I YSV EE D+GSFVGNIAKDLGL+P  LA
Sbjct: 1   MKIQKKLTGCSRLMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELA 60

Query: 61  EQGVRIVSRGRSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVE 120
           + GVRIVSRGR  LFALNPRSGSL+TA RIDREELCAQS PCL++FNIL+EDK+ ++ VE
Sbjct: 61  DGGVRIVSRGRMPLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVE 120

Query: 121 VEITDINDNAPRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSL 180
           VEI DINDN P+F +EELE K++E TTPG R+ L    D DVG N+LQ Y L+ N HFSL
Sbjct: 121 VEIIDINDNTPQFQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSL 180

Query: 181 DVRRGADGNKYPELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAP 240
           DV++GADG ++PE+VL+  LDREEEAVHHL+L ASDGG+PV SGT RI ++V+DANDN P
Sbjct: 181 DVQQGADGPQHPEMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPP 240

Query: 241 VFTQPEYRISIPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGE 300
            FTQ +Y I++PEN  +GT++L V ATD DEG   +V Y         +++F L S +GE
Sbjct: 241 AFTQAQYHINVPENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGE 300

Query: 301 LTIIKDLDYEDATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDS 360
           ++  + LD+E+   + ++++AQDG GL+ + KV++ VLDVNDNAPE  +TS T++V E+ 
Sbjct: 301 ISNKEPLDFEEYKMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENF 360

Query: 361 LPGTIIGLFNVHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNI 420
            PGTII L +VHD+DSG N +TTC +P +LPFKLEK VDNYYRLVT R LDRE  S YNI
Sbjct: 361 PPGTIIALISVHDQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNI 420

Query: 421 TLTAKDGGNPSLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPD 480
           T+TA D G P+LST+ HI L V DINDN+P F + SYS YIPENNPRGAS+FSV AHD D
Sbjct: 421 TITAIDQGTPALSTETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLD 480

Query: 481 SNDNAHVTYSFAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNP 540
           SN+NA +TYS  EDT+QGAPLS+Y+SINSDTGVLYALRSFDYEQ RD+Q+ V+ARDSG+P
Sbjct: 481 SNENAQITYSLIEDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDP 540

Query: 541 PLSSNVSLSLFVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
           PLSSNVSLSLF+LDQNDNAPEILYPA PTDGSTGVELAP SAEPGYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLSLFLLDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQ 600

Query: 601 NAWLSYHLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTL 660
           NAWLSY LLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVA+QDHGQPPLSATVTL
Sbjct: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660

Query: 661 TVAVADRIPDILADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWH 720
           TVAVADRI DILADLGSLEPSA PNDSDLTLYLVVA AAVSCVFLAFVIVLLAHRLRRWH
Sbjct: 661 TVAVADRISDILADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWH 720

Query: 721 KSRLLQASGGSLTGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
           KSRLLQASGG L  M  SHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI
Sbjct: 721 KSRLLQASGGGLASMPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780

Query: 781 SQESCEKKDFLSAPQSLLEEEREETFSQV 809
           SQESCEKK FLSAPQSLL E+++E FSQV
Sbjct: 781 SQESCEKKGFLSAPQSLL-EDKKEPFSQV 808


>gi|11056032 protocadherin gamma subfamily A, 1 isoform 1 precursor
           [Homo sapiens]
          Length = 931

 Score = 1163 bits (3008), Expect = 0.0
 Identities = 588/808 (72%), Positives = 673/808 (83%), Gaps = 1/808 (0%)

Query: 1   MAALQKLPHCRKLVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALA 60
           M   +KL  C +L+LLC  L  L EA AG I YSV EE D+GSFVGNIAKDLGL+P  LA
Sbjct: 1   MKIQKKLTGCSRLMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELA 60

Query: 61  EQGVRIVSRGRSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVE 120
           + GVRIVSRGR  LFALNPRSGSL+TA RIDREELCAQS PCL++FNIL+EDK+ ++ VE
Sbjct: 61  DGGVRIVSRGRMPLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVE 120

Query: 121 VEITDINDNAPRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSL 180
           VEI DINDN P+F +EELE K++E TTPG R+ L    D DVG N+LQ Y L+ N HFSL
Sbjct: 121 VEIIDINDNTPQFQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSL 180

Query: 181 DVRRGADGNKYPELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAP 240
           DV++GADG ++PE+VL+  LDREEEAVHHL+L ASDGG+PV SGT RI ++V+DANDN P
Sbjct: 181 DVQQGADGPQHPEMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPP 240

Query: 241 VFTQPEYRISIPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGE 300
            FTQ +Y I++PEN  +GT++L V ATD DEG   +V Y         +++F L S +GE
Sbjct: 241 AFTQAQYHINVPENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGE 300

Query: 301 LTIIKDLDYEDATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDS 360
           ++  + LD+E+   + ++++AQDG GL+ + KV++ VLDVNDNAPE  +TS T++V E+ 
Sbjct: 301 ISNKEPLDFEEYKMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENF 360

Query: 361 LPGTIIGLFNVHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNI 420
            PGTII L +VHD+DSG N +TTC +P +LPFKLEK VDNYYRLVT R LDRE  S YNI
Sbjct: 361 PPGTIIALISVHDQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNI 420

Query: 421 TLTAKDGGNPSLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPD 480
           T+TA D G P+LST+ HI L V DINDN+P F + SYS YIPENNPRGAS+FSV AHD D
Sbjct: 421 TITAIDQGTPALSTETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLD 480

Query: 481 SNDNAHVTYSFAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNP 540
           SN+NA +TYS  EDT+QGAPLS+Y+SINSDTGVLYALRSFDYEQ RD+Q+ V+ARDSG+P
Sbjct: 481 SNENAQITYSLIEDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDP 540

Query: 541 PLSSNVSLSLFVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
           PLSSNVSLSLF+LDQNDNAPEILYPA PTDGSTGVELAP SAEPGYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLSLFLLDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQ 600

Query: 601 NAWLSYHLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTL 660
           NAWLSY LLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVA+QDHGQPPLSATVTL
Sbjct: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660

Query: 661 TVAVADRIPDILADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWH 720
           TVAVADRI DILADLGSLEPSA PNDSDLTLYLVVA AAVSCVFLAFVIVLLAHRLRRWH
Sbjct: 661 TVAVADRISDILADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWH 720

Query: 721 KSRLLQASGGSLTGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
           KSRLLQASGG L  M  SHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI
Sbjct: 721 KSRLLQASGGGLASMPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780

Query: 781 SQESCEKKDFLSAPQSLLEEEREETFSQ 808
           SQESCEKK FLSAPQSLL E+++E FSQ
Sbjct: 781 SQESCEKKGFLSAPQSLL-EDKKEPFSQ 807


>gi|14196474 protocadherin gamma subfamily A, 6 isoform 2 precursor
           [Homo sapiens]
          Length = 818

 Score = 1135 bits (2936), Expect = 0.0
 Identities = 583/811 (71%), Positives = 657/811 (81%)

Query: 1   MAALQKLPHCRKLVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALA 60
           MA  Q+ P   + VLL  LL TLW A A QIRYS+ EE+++GSFVGNI KDLGLEP  LA
Sbjct: 1   MAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELA 60

Query: 61  EQGVRIVSRGRSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVE 120
           E GVRIVSRGR QLF+LNPR+GSLVTA RIDREELCAQS  CL++FNIL+EDKL +Y VE
Sbjct: 61  EHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVE 120

Query: 121 VEITDINDNAPRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSL 180
           VEI DINDN PRF  EELE+KI E   P  R PL   +D DVG N+LQ + L+ N HFS+
Sbjct: 121 VEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSV 180

Query: 181 DVRRGADGNKYPELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAP 240
           DV+  A G KYPELVLE +LDRE EAV+ LVL A DGGDPV S  ++I V VLD NDN P
Sbjct: 181 DVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTP 240

Query: 241 VFTQPEYRISIPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGE 300
           +FTQP YR+S+PEN  VGT +L VTATD DEG + +V Y   K   + S++F L   +GE
Sbjct: 241 MFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGE 300

Query: 301 LTIIKDLDYEDATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDS 360
           ++   +LDYED++F+E+ +EA+DGPGL  RAKV++T+LDVNDN PE  +TS + +++E +
Sbjct: 301 ISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESA 360

Query: 361 LPGTIIGLFNVHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNI 420
            PGT+I LF V DRDSG N   TCS+P  LPF+LEKSV NYYRLVT  ALDRE+   YNI
Sbjct: 361 PPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNI 420

Query: 421 TLTAKDGGNPSLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPD 480
           T+TA D G P LST+  I L VAD NDN P F  +SYS Y+ ENNPRGAS+FSV A DPD
Sbjct: 421 TVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPD 480

Query: 481 SNDNAHVTYSFAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNP 540
            + NA V+YS AEDT+QGAPLSSY+SINSDTG+LYALRSFDYEQLRDLQ+WV A DSG+P
Sbjct: 481 VDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDP 540

Query: 541 PLSSNVSLSLFVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
           PLSSNVSLSLFVLDQNDNAPEILYPA PTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600

Query: 601 NAWLSYHLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTL 660
           NAWLSY LLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVA+QDHGQPPLSATVTL
Sbjct: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660

Query: 661 TVAVADRIPDILADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWH 720
           TVAVADRIPDILADLGSLEPSA PNDSDLTLYLVVAVAAVSCVFLAFVIVLLA RL+RWH
Sbjct: 661 TVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWH 720

Query: 721 KSRLLQASGGSLTGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
           KSRLLQASGG L  M  SHFVGV+GVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI
Sbjct: 721 KSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780

Query: 781 SQESCEKKDFLSAPQSLLEEEREETFSQVIY 811
           +QES EK + L   Q LLE + E    QV +
Sbjct: 781 NQESYEKSEPLLITQDLLETKGEPRQLQVSF 811


>gi|14196471 protocadherin gamma subfamily A, 5 isoform 2 precursor
           [Homo sapiens]
          Length = 813

 Score = 1135 bits (2935), Expect = 0.0
 Identities = 580/804 (72%), Positives = 660/804 (82%), Gaps = 1/804 (0%)

Query: 10  CRKLVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALAEQGVRIVSR 69
           C +L+L   LL TL E  +GQIRYS+ EE+D+GSFVGNIAKDLGLEP  LAE+GVRIVSR
Sbjct: 10  CGELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELAERGVRIVSR 69

Query: 70  GRSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVEVEITDINDN 129
           GR+QLFALNPRSGSLVTA RIDREELCAQS  C++NFNIL+E+K+ IY VEVEI DINDN
Sbjct: 70  GRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVEVEIIDINDN 129

Query: 130 APRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSLDVRRGADGN 189
            PRF  EEL++K++E    G R+ L  A DADVG N+L+ Y L+ N HFSLDV  G DG 
Sbjct: 130 FPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSLDVVSGTDGQ 189

Query: 190 KYPELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAPVFTQPEYRI 249
           KYPELVLE+ LDRE+E VH L+L A DGGDPVLSGT+ I V VLDANDNAP+FT  EY +
Sbjct: 190 KYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAPLFTPSEYSV 249

Query: 250 SIPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGELTIIKDLDY 309
           S+PEN  VGTR+L +TATD DEG   ++ Y       + SE F+L S  GE++ ++ LDY
Sbjct: 250 SVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGEISTLQSLDY 309

Query: 310 EDATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDSLPGTIIGLF 369
           E++ F+ +++ AQDG  L+  AKV+VTV DVNDNAPE  +TS TSS+SED LPGT+I LF
Sbjct: 310 EESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDCLPGTVIALF 369

Query: 370 NVHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNITLTAKDGGN 429
           +VHD DSG+N    CS+P +LPFKLEKSVDNYY L+TTR LDRE+ S YNITLT  D G 
Sbjct: 370 SVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNITLTVMDHGT 429

Query: 430 PSLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPDSNDNAHVTY 489
           P LST++HI L+VAD+NDN P F + SYST + ENNPRG S+FSVTAHDPDS DNA VTY
Sbjct: 430 PPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPDSGDNARVTY 489

Query: 490 SFAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNPPLSSNVSLS 549
           S AEDT QGAPLSSY+SINSDTGVLYALRSFDYEQLRDLQ+WV A DSGNPPLSSNVSLS
Sbjct: 490 SLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNPPLSSNVSLS 549

Query: 550 LFVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYHLL 609
           LFVLDQNDN PEILYPA PTDGSTGVELAPRSAEPGYLVTKVVAVD+DSGQNAWLSY LL
Sbjct: 550 LFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLL 609

Query: 610 KASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTLTVAVADRIP 669
           KASEPGLF+VGLHTGEVRTARALLDRDALKQSLVVA++DHGQPPLSAT T+TVAVADRIP
Sbjct: 610 KASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTVTVAVADRIP 669

Query: 670 DILADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASG 729
           DILADLGS++    P D DLTLYLVVAVAAVSCVFLAFVIVLL  RLRRWHKSRLLQA G
Sbjct: 670 DILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWHKSRLLQAEG 729

Query: 730 GSLTGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKKD 789
             L G+ +SHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTL+S+ESCEK +
Sbjct: 730 SRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLLSEESCEKSE 789

Query: 790 FLSAPQSLLEEEREETFSQVIYLF 813
            L      ++  +EE   QV +LF
Sbjct: 790 PLLMSDK-VDANKEERRVQVSFLF 812


>gi|11056065 protocadherin gamma subfamily A, 6 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score = 1134 bits (2933), Expect = 0.0
 Identities = 581/803 (72%), Positives = 654/803 (81%)

Query: 1   MAALQKLPHCRKLVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALA 60
           MA  Q+ P   + VLL  LL TLW A A QIRYS+ EE+++GSFVGNI KDLGLEP  LA
Sbjct: 1   MAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELA 60

Query: 61  EQGVRIVSRGRSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVE 120
           E GVRIVSRGR QLF+LNPR+GSLVTA RIDREELCAQS  CL++FNIL+EDKL +Y VE
Sbjct: 61  EHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVE 120

Query: 121 VEITDINDNAPRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSL 180
           VEI DINDN PRF  EELE+KI E   P  R PL   +D DVG N+LQ + L+ N HFS+
Sbjct: 121 VEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSV 180

Query: 181 DVRRGADGNKYPELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAP 240
           DV+  A G KYPELVLE +LDRE EAV+ LVL A DGGDPV S  ++I V VLD NDN P
Sbjct: 181 DVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTP 240

Query: 241 VFTQPEYRISIPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGE 300
           +FTQP YR+S+PEN  VGT +L VTATD DEG + +V Y   K   + S++F L   +GE
Sbjct: 241 MFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGE 300

Query: 301 LTIIKDLDYEDATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDS 360
           ++   +LDYED++F+E+ +EA+DGPGL  RAKV++T+LDVNDN PE  +TS + +++E +
Sbjct: 301 ISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESA 360

Query: 361 LPGTIIGLFNVHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNI 420
            PGT+I LF V DRDSG N   TCS+P  LPF+LEKSV NYYRLVT  ALDRE+   YNI
Sbjct: 361 PPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNI 420

Query: 421 TLTAKDGGNPSLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPD 480
           T+TA D G P LST+  I L VAD NDN P F  +SYS Y+ ENNPRGAS+FSV A DPD
Sbjct: 421 TVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPD 480

Query: 481 SNDNAHVTYSFAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNP 540
            + NA V+YS AEDT+QGAPLSSY+SINSDTG+LYALRSFDYEQLRDLQ+WV A DSG+P
Sbjct: 481 VDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDP 540

Query: 541 PLSSNVSLSLFVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
           PLSSNVSLSLFVLDQNDNAPEILYPA PTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600

Query: 601 NAWLSYHLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTL 660
           NAWLSY LLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVA+QDHGQPPLSATVTL
Sbjct: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660

Query: 661 TVAVADRIPDILADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWH 720
           TVAVADRIPDILADLGSLEPSA PNDSDLTLYLVVAVAAVSCVFLAFVIVLLA RL+RWH
Sbjct: 661 TVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWH 720

Query: 721 KSRLLQASGGSLTGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
           KSRLLQASGG L  M  SHFVGV+GVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI
Sbjct: 721 KSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780

Query: 781 SQESCEKKDFLSAPQSLLEEERE 803
           +QES EK + L   Q LLE + E
Sbjct: 781 NQESYEKSEPLLITQDLLETKGE 803


>gi|11128041 protocadherin gamma subfamily A, 10 isoform 1 precursor
           [Homo sapiens]
          Length = 936

 Score = 1134 bits (2932), Expect = 0.0
 Identities = 577/793 (72%), Positives = 652/793 (82%), Gaps = 4/793 (0%)

Query: 10  CRKLVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALAEQGVRIVSR 69
           C  LVLLC      WEA A QI YS+ EE+++GSFVGNI+KDLGL P  LAE+GVRIVSR
Sbjct: 14  CSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVSR 73

Query: 70  GRSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVEVEITDINDN 129
           GR+QLF+LNPRSGSL+TA RIDREELCAQSA C+++FNIL+ED++ ++ +E+E+TDINDN
Sbjct: 74  GRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDINDN 133

Query: 130 APRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSLDVRRGADGN 189
           AP+F  E L++KI+E    G R PL  A D DVG N+LQ Y L+PN HFSL V+  A+G 
Sbjct: 134 APKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANGV 193

Query: 190 KYPELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAPVFTQPEYRI 249
           KYPELVLE SLDREEEA+HHLVL ASDGGDP+ SGT  + V V DANDNAPVFT PEYR+
Sbjct: 194 KYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYRV 253

Query: 250 SIPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGELTIIKDLDY 309
           S+PEN  VGT++LTVTATD DEG   +V Y   K P      F+L   +GE+ I ++LDY
Sbjct: 254 SVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLDY 313

Query: 310 EDATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDSLPGTIIGLF 369
           E+  F+EI+I+A+DG   L  AKV++TV DVNDN+PE  +TS  S V+EDS  GT++ L 
Sbjct: 314 EETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVALL 373

Query: 370 NVHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNITLTAKDGGN 429
           NVHD DS QN   TCS+   LPFKLEKS+D+YYRLV  RALDREQ S YNIT+TA DGG+
Sbjct: 374 NVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGGS 433

Query: 430 PSLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPDSNDNAHVTY 489
           P LST+AH +LQVADINDN P FS+ SY TYIPENN RGAS+FSVTA DPDS +NA + Y
Sbjct: 434 PPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQIIY 493

Query: 490 SFAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNPPLSSNVSLS 549
           S AEDT+QG PLSSYISINSDTGVLYALRSFDYEQ  +LQ+ V A DSG+PPLSSNVSLS
Sbjct: 494 SLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSLS 553

Query: 550 LFVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYHLL 609
           LFVLDQNDNAPEILYPA PTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSY LL
Sbjct: 554 LFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLL 613

Query: 610 KASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTLTVAVADRIP 669
           KASEPGLF+VG HTGEVRTARALLDRDALKQSLVVA+QDHGQPPLSATVTLTVAVAD IP
Sbjct: 614 KASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIP 673

Query: 670 DILADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASG 729
            +LADLGS E  A    SDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASG
Sbjct: 674 QVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASG 733

Query: 730 GSLTGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKKD 789
           G LTG+  SHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEK D
Sbjct: 734 GGLTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKND 793

Query: 790 FLSAPQSLLEEER 802
               P SLL++ +
Sbjct: 794 ----PLSLLDDSK 802


>gi|14196448 protocadherin gamma subfamily A, 10 isoform 2 precursor
           [Homo sapiens]
          Length = 850

 Score = 1134 bits (2932), Expect = 0.0
 Identities = 577/793 (72%), Positives = 652/793 (82%), Gaps = 4/793 (0%)

Query: 10  CRKLVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALAEQGVRIVSR 69
           C  LVLLC      WEA A QI YS+ EE+++GSFVGNI+KDLGL P  LAE+GVRIVSR
Sbjct: 14  CSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVSR 73

Query: 70  GRSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVEVEITDINDN 129
           GR+QLF+LNPRSGSL+TA RIDREELCAQSA C+++FNIL+ED++ ++ +E+E+TDINDN
Sbjct: 74  GRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDINDN 133

Query: 130 APRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSLDVRRGADGN 189
           AP+F  E L++KI+E    G R PL  A D DVG N+LQ Y L+PN HFSL V+  A+G 
Sbjct: 134 APKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANGV 193

Query: 190 KYPELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAPVFTQPEYRI 249
           KYPELVLE SLDREEEA+HHLVL ASDGGDP+ SGT  + V V DANDNAPVFT PEYR+
Sbjct: 194 KYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYRV 253

Query: 250 SIPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGELTIIKDLDY 309
           S+PEN  VGT++LTVTATD DEG   +V Y   K P      F+L   +GE+ I ++LDY
Sbjct: 254 SVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLDY 313

Query: 310 EDATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDSLPGTIIGLF 369
           E+  F+EI+I+A+DG   L  AKV++TV DVNDN+PE  +TS  S V+EDS  GT++ L 
Sbjct: 314 EETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVALL 373

Query: 370 NVHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNITLTAKDGGN 429
           NVHD DS QN   TCS+   LPFKLEKS+D+YYRLV  RALDREQ S YNIT+TA DGG+
Sbjct: 374 NVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGGS 433

Query: 430 PSLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPDSNDNAHVTY 489
           P LST+AH +LQVADINDN P FS+ SY TYIPENN RGAS+FSVTA DPDS +NA + Y
Sbjct: 434 PPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQIIY 493

Query: 490 SFAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNPPLSSNVSLS 549
           S AEDT+QG PLSSYISINSDTGVLYALRSFDYEQ  +LQ+ V A DSG+PPLSSNVSLS
Sbjct: 494 SLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSLS 553

Query: 550 LFVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYHLL 609
           LFVLDQNDNAPEILYPA PTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSY LL
Sbjct: 554 LFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLL 613

Query: 610 KASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTLTVAVADRIP 669
           KASEPGLF+VG HTGEVRTARALLDRDALKQSLVVA+QDHGQPPLSATVTLTVAVAD IP
Sbjct: 614 KASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIP 673

Query: 670 DILADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASG 729
            +LADLGS E  A    SDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASG
Sbjct: 674 QVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASG 733

Query: 730 GSLTGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKKD 789
           G LTG+  SHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEK D
Sbjct: 734 GGLTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKND 793

Query: 790 FLSAPQSLLEEER 802
               P SLL++ +
Sbjct: 794 ----PLSLLDDSK 802


>gi|11056024 protocadherin gamma subfamily A, 5 isoform 1 precursor
           [Homo sapiens]
          Length = 931

 Score = 1130 bits (2924), Expect = 0.0
 Identities = 576/799 (72%), Positives = 654/799 (81%)

Query: 10  CRKLVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALAEQGVRIVSR 69
           C +L+L   LL TL E  +GQIRYS+ EE+D+GSFVGNIAKDLGLEP  LAE+GVRIVSR
Sbjct: 10  CGELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELAERGVRIVSR 69

Query: 70  GRSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVEVEITDINDN 129
           GR+QLFALNPRSGSLVTA RIDREELCAQS  C++NFNIL+E+K+ IY VEVEI DINDN
Sbjct: 70  GRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVEVEIIDINDN 129

Query: 130 APRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSLDVRRGADGN 189
            PRF  EEL++K++E    G R+ L  A DADVG N+L+ Y L+ N HFSLDV  G DG 
Sbjct: 130 FPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSLDVVSGTDGQ 189

Query: 190 KYPELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAPVFTQPEYRI 249
           KYPELVLE+ LDRE+E VH L+L A DGGDPVLSGT+ I V VLDANDNAP+FT  EY +
Sbjct: 190 KYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAPLFTPSEYSV 249

Query: 250 SIPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGELTIIKDLDY 309
           S+PEN  VGTR+L +TATD DEG   ++ Y       + SE F+L S  GE++ ++ LDY
Sbjct: 250 SVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGEISTLQSLDY 309

Query: 310 EDATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDSLPGTIIGLF 369
           E++ F+ +++ AQDG  L+  AKV+VTV DVNDNAPE  +TS TSS+SED LPGT+I LF
Sbjct: 310 EESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDCLPGTVIALF 369

Query: 370 NVHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNITLTAKDGGN 429
           +VHD DSG+N    CS+P +LPFKLEKSVDNYY L+TTR LDRE+ S YNITLT  D G 
Sbjct: 370 SVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNITLTVMDHGT 429

Query: 430 PSLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPDSNDNAHVTY 489
           P LST++HI L+VAD+NDN P F + SYST + ENNPRG S+FSVTAHDPDS DNA VTY
Sbjct: 430 PPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPDSGDNARVTY 489

Query: 490 SFAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNPPLSSNVSLS 549
           S AEDT QGAPLSSY+SINSDTGVLYALRSFDYEQLRDLQ+WV A DSGNPPLSSNVSLS
Sbjct: 490 SLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNPPLSSNVSLS 549

Query: 550 LFVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYHLL 609
           LFVLDQNDN PEILYPA PTDGSTGVELAPRSAEPGYLVTKVVAVD+DSGQNAWLSY LL
Sbjct: 550 LFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLL 609

Query: 610 KASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTLTVAVADRIP 669
           KASEPGLF+VGLHTGEVRTARALLDRDALKQSLVVA++DHGQPPLSAT T+TVAVADRIP
Sbjct: 610 KASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTVTVAVADRIP 669

Query: 670 DILADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASG 729
           DILADLGS++    P D DLTLYLVVAVAAVSCVFLAFVIVLL  RLRRWHKSRLLQA G
Sbjct: 670 DILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWHKSRLLQAEG 729

Query: 730 GSLTGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKKD 789
             L G+ +SHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTL+S+ESCEK +
Sbjct: 730 SRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLLSEESCEKSE 789

Query: 790 FLSAPQSLLEEEREETFSQ 808
            L     +   + E    Q
Sbjct: 790 PLLMSDKVDANKEERRVQQ 808


>gi|11056026 protocadherin gamma subfamily A, 4 isoform 1 precursor
           [Homo sapiens]
          Length = 931

 Score = 1122 bits (2902), Expect = 0.0
 Identities = 575/808 (71%), Positives = 648/808 (80%)

Query: 1   MAALQKLPHCRKLVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALA 60
           MAA    P   +L+ +C LL  L E RA QI YSV EE + GS VGNIAKDLGL P  LA
Sbjct: 1   MAAPPARPDHTRLLQICLLLGVLVEIRAEQILYSVFEEQEEGSVVGNIAKDLGLAPRELA 60

Query: 61  EQGVRIVSRGRSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVE 120
           E+GVRIVSRGR+QLFALNPRSG+LVTA RIDREELC +S  C+ N  ILLED + I  VE
Sbjct: 61  ERGVRIVSRGRTQLFALNPRSGTLVTAGRIDREELCDRSPNCVTNLEILLEDTVKILRVE 120

Query: 121 VEITDINDNAPRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSL 180
           VEI D+NDN P FG E+ E+K++E   PG R PL  A D DVG N+LQ Y LN N +FSL
Sbjct: 121 VEIIDVNDNPPSFGTEQREIKVAENENPGARFPLPEAFDPDVGVNSLQGYQLNSNGYFSL 180

Query: 181 DVRRGADGNKYPELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAP 240
           DV+ GADG KYPELVLER+LDREEEAVHHLVL A DGGDPV SGT+RI + ++D NDNAP
Sbjct: 181 DVQSGADGIKYPELVLERALDREEEAVHHLVLTAFDGGDPVRSGTARILIILVDTNDNAP 240

Query: 241 VFTQPEYRISIPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGE 300
           VFTQPEY +S+ EN  VGTR+LTV ATD DEG    V Y   K   + S++F+L S SG+
Sbjct: 241 VFTQPEYHVSVRENVPVGTRLLTVKATDPDEGANGDVTYSFRKVRDKISQLFQLNSLSGD 300

Query: 301 LTIIKDLDYEDATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDS 360
           +TI+  LDYED+ F++ID+EA DGPGL  R+KV+VTVLD NDNAPE  +TS TSSV E S
Sbjct: 301 ITILGGLDYEDSGFYDIDVEAHDGPGLRARSKVLVTVLDENDNAPEVTVTSLTSSVQESS 360

Query: 361 LPGTIIGLFNVHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNI 420
            PGT+I LFNVHD DSG N   TCS+P++LPF LEK+  NYYRL+T R LDRE+ S YNI
Sbjct: 361 SPGTVIALFNVHDSDSGGNGLVTCSIPDNLPFTLEKTYGNYYRLLTHRTLDREEVSEYNI 420

Query: 421 TLTAKDGGNPSLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPD 480
           T+TA D G P LST+ HI LQV DINDN P F   SYS YIPENNPRGAS+ S+TA DPD
Sbjct: 421 TVTATDQGTPPLSTETHISLQVMDINDNPPTFPHASYSAYIPENNPRGASILSMTAQDPD 480

Query: 481 SNDNAHVTYSFAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNP 540
           S DNA +TYS AEDT QGAPLSSY+SINS+TG+LYAL SFDYEQ RDLQ+ + A DSG+P
Sbjct: 481 SGDNARITYSLAEDTFQGAPLSSYVSINSNTGILYALCSFDYEQFRDLQLLMTASDSGDP 540

Query: 541 PLSSNVSLSLFVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
           PLSSNVSLSLFVLDQNDN PEILYP FPTDGSTGVELAPRSA+ GYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNVPEILYPTFPTDGSTGVELAPRSADSGYLVTKVVAVDRDSGQ 600

Query: 601 NAWLSYHLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTL 660
           NAWLSY LLK+SEPGLF+VGLHTGEVRTARALLDRDALKQ LVV +QDHGQPPLSATVTL
Sbjct: 601 NAWLSYSLLKSSEPGLFAVGLHTGEVRTARALLDRDALKQRLVVVVQDHGQPPLSATVTL 660

Query: 661 TVAVADRIPDILADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWH 720
           TVAVAD IPD+LADLGSL+PSA P+DS LTLYLVVAVAAVSCVFLAFV VLLA +LRRWH
Sbjct: 661 TVAVADSIPDVLADLGSLKPSADPDDSGLTLYLVVAVAAVSCVFLAFVTVLLALKLRRWH 720

Query: 721 KSRLLQASGGSLTGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
           KSRLL A G  L G+ +SHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIF QP+YADTLI
Sbjct: 721 KSRLLHAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFSQPSYADTLI 780

Query: 781 SQESCEKKDFLSAPQSLLEEEREETFSQ 808
           S+ESCEK + L   Q LLE + +    Q
Sbjct: 781 SRESCEKSEPLLITQDLLETKGDPNLQQ 808


>gi|14196468 protocadherin gamma subfamily A, 4 isoform 2 precursor
           [Homo sapiens]
          Length = 820

 Score = 1120 bits (2898), Expect = 0.0
 Identities = 574/799 (71%), Positives = 645/799 (80%)

Query: 1   MAALQKLPHCRKLVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALA 60
           MAA    P   +L+ +C LL  L E RA QI YSV EE + GS VGNIAKDLGL P  LA
Sbjct: 1   MAAPPARPDHTRLLQICLLLGVLVEIRAEQILYSVFEEQEEGSVVGNIAKDLGLAPRELA 60

Query: 61  EQGVRIVSRGRSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVE 120
           E+GVRIVSRGR+QLFALNPRSG+LVTA RIDREELC +S  C+ N  ILLED + I  VE
Sbjct: 61  ERGVRIVSRGRTQLFALNPRSGTLVTAGRIDREELCDRSPNCVTNLEILLEDTVKILRVE 120

Query: 121 VEITDINDNAPRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSL 180
           VEI D+NDN P FG E+ E+K++E   PG R PL  A D DVG N+LQ Y LN N +FSL
Sbjct: 121 VEIIDVNDNPPSFGTEQREIKVAENENPGARFPLPEAFDPDVGVNSLQGYQLNSNGYFSL 180

Query: 181 DVRRGADGNKYPELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAP 240
           DV+ GADG KYPELVLER+LDREEEAVHHLVL A DGGDPV SGT+RI + ++D NDNAP
Sbjct: 181 DVQSGADGIKYPELVLERALDREEEAVHHLVLTAFDGGDPVRSGTARILIILVDTNDNAP 240

Query: 241 VFTQPEYRISIPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGE 300
           VFTQPEY +S+ EN  VGTR+LTV ATD DEG    V Y   K   + S++F+L S SG+
Sbjct: 241 VFTQPEYHVSVRENVPVGTRLLTVKATDPDEGANGDVTYSFRKVRDKISQLFQLNSLSGD 300

Query: 301 LTIIKDLDYEDATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDS 360
           +TI+  LDYED+ F++ID+EA DGPGL  R+KV+VTVLD NDNAPE  +TS TSSV E S
Sbjct: 301 ITILGGLDYEDSGFYDIDVEAHDGPGLRARSKVLVTVLDENDNAPEVTVTSLTSSVQESS 360

Query: 361 LPGTIIGLFNVHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNI 420
            PGT+I LFNVHD DSG N   TCS+P++LPF LEK+  NYYRL+T R LDRE+ S YNI
Sbjct: 361 SPGTVIALFNVHDSDSGGNGLVTCSIPDNLPFTLEKTYGNYYRLLTHRTLDREEVSEYNI 420

Query: 421 TLTAKDGGNPSLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPD 480
           T+TA D G P LST+ HI LQV DINDN P F   SYS YIPENNPRGAS+ S+TA DPD
Sbjct: 421 TVTATDQGTPPLSTETHISLQVMDINDNPPTFPHASYSAYIPENNPRGASILSMTAQDPD 480

Query: 481 SNDNAHVTYSFAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNP 540
           S DNA +TYS AEDT QGAPLSSY+SINS+TG+LYAL SFDYEQ RDLQ+ + A DSG+P
Sbjct: 481 SGDNARITYSLAEDTFQGAPLSSYVSINSNTGILYALCSFDYEQFRDLQLLMTASDSGDP 540

Query: 541 PLSSNVSLSLFVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
           PLSSNVSLSLFVLDQNDN PEILYP FPTDGSTGVELAPRSA+ GYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNVPEILYPTFPTDGSTGVELAPRSADSGYLVTKVVAVDRDSGQ 600

Query: 601 NAWLSYHLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTL 660
           NAWLSY LLK+SEPGLF+VGLHTGEVRTARALLDRDALKQ LVV +QDHGQPPLSATVTL
Sbjct: 601 NAWLSYSLLKSSEPGLFAVGLHTGEVRTARALLDRDALKQRLVVVVQDHGQPPLSATVTL 660

Query: 661 TVAVADRIPDILADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWH 720
           TVAVAD IPD+LADLGSL+PSA P+DS LTLYLVVAVAAVSCVFLAFV VLLA +LRRWH
Sbjct: 661 TVAVADSIPDVLADLGSLKPSADPDDSGLTLYLVVAVAAVSCVFLAFVTVLLALKLRRWH 720

Query: 721 KSRLLQASGGSLTGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
           KSRLL A G  L G+ +SHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIF QP+YADTLI
Sbjct: 721 KSRLLHAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFSQPSYADTLI 780

Query: 781 SQESCEKKDFLSAPQSLLE 799
           S+ESCEK + L   Q LLE
Sbjct: 781 SRESCEKSEPLLITQDLLE 799


>gi|11056063 protocadherin gamma subfamily A, 7 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score = 1117 bits (2890), Expect = 0.0
 Identities = 565/791 (71%), Positives = 649/791 (82%)

Query: 1   MAALQKLPHCRKLVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALA 60
           MAA  +    R   LL  LL T WEA AG+I YSV EE D+GSFVG+IAKDLGLEP  LA
Sbjct: 1   MAAQPRGGDYRGFFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELA 60

Query: 61  EQGVRIVSRGRSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVE 120
           E+GVRI+SRGR+QLFALN RSGSLVTA RIDREE+CAQSA CL+NFNIL+EDK+ +Y ++
Sbjct: 61  ERGVRIISRGRTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPID 120

Query: 121 VEITDINDNAPRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSL 180
           VEI DINDN PRF  EE+ +KI E T PG R PL  A D DVG N+LQ Y L+PN HFSL
Sbjct: 121 VEIIDINDNVPRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSL 180

Query: 181 DVRRGADGNKYPELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAP 240
            V+ G D  KYPELVLER LDREEE VHHLVL ASDGGDP  S T+ I V V+D ND+ P
Sbjct: 181 AVQSGDDETKYPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTP 240

Query: 241 VFTQPEYRISIPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGE 300
           VF+ P+Y++++PEN  VGTR+LTV A D DEG   +V Y   K   +  ++F L S +GE
Sbjct: 241 VFSLPQYQVTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGE 300

Query: 301 LTIIKDLDYEDATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDS 360
           ++ ++ LDYE+  F+E++++AQDGPG LT+AKV++TVLDVNDNAPE  MTS +SS+ ED+
Sbjct: 301 ISTLEGLDYEETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDT 360

Query: 361 LPGTIIGLFNVHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNI 420
             GT+I LF + DRDSG+N   TC++PE+LPFKLEKS+DNYYRLVTT+ LDRE  S YNI
Sbjct: 361 PLGTVIALFYLQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNI 420

Query: 421 TLTAKDGGNPSLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPD 480
           TL A DGG P LS + HI +QVAD NDN P F  +SYS YI ENNPRGAS+F VTA D D
Sbjct: 421 TLKATDGGTPPLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHD 480

Query: 481 SNDNAHVTYSFAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNP 540
           S DNA +TYS AEDT+QGAP+SSY+SINSDTGVLYAL+SFDYEQLR+LQ+ V A DSG+P
Sbjct: 481 SEDNAQITYSLAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDP 540

Query: 541 PLSSNVSLSLFVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
           PLSSN+SLSLFVLDQNDN PEILYPA PTDGSTG+ELAPRSAEPGYLVTKVVAVD+DSGQ
Sbjct: 541 PLSSNMSLSLFVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQ 600

Query: 601 NAWLSYHLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTL 660
           NAWLSY LLKASEPGLF+VGL+TGEVRTARALLDRDALKQSLVVA+QDHGQPPLSATVTL
Sbjct: 601 NAWLSYLLLKASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660

Query: 661 TVAVADRIPDILADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWH 720
           TVAVAD IP++LADLGSLEPS  P + DLTLYLVVAVA VSCVFLAFV+VLLA RLRRWH
Sbjct: 661 TVAVADSIPEVLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWH 720

Query: 721 KSRLLQASGGSLTGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
           KSRLLQAS G L  + +SHFVG+DGV+AFLQTYSHEVSLTADSRKSHLIFPQPNY D LI
Sbjct: 721 KSRLLQASEGGLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLI 780

Query: 781 SQESCEKKDFL 791
           SQESCEK D L
Sbjct: 781 SQESCEKNDSL 791


>gi|14196477 protocadherin gamma subfamily A, 7 isoform 2 precursor
           [Homo sapiens]
          Length = 817

 Score = 1117 bits (2890), Expect = 0.0
 Identities = 565/791 (71%), Positives = 649/791 (82%)

Query: 1   MAALQKLPHCRKLVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALA 60
           MAA  +    R   LL  LL T WEA AG+I YSV EE D+GSFVG+IAKDLGLEP  LA
Sbjct: 1   MAAQPRGGDYRGFFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELA 60

Query: 61  EQGVRIVSRGRSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVE 120
           E+GVRI+SRGR+QLFALN RSGSLVTA RIDREE+CAQSA CL+NFNIL+EDK+ +Y ++
Sbjct: 61  ERGVRIISRGRTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPID 120

Query: 121 VEITDINDNAPRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSL 180
           VEI DINDN PRF  EE+ +KI E T PG R PL  A D DVG N+LQ Y L+PN HFSL
Sbjct: 121 VEIIDINDNVPRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSL 180

Query: 181 DVRRGADGNKYPELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAP 240
            V+ G D  KYPELVLER LDREEE VHHLVL ASDGGDP  S T+ I V V+D ND+ P
Sbjct: 181 AVQSGDDETKYPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTP 240

Query: 241 VFTQPEYRISIPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGE 300
           VF+ P+Y++++PEN  VGTR+LTV A D DEG   +V Y   K   +  ++F L S +GE
Sbjct: 241 VFSLPQYQVTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGE 300

Query: 301 LTIIKDLDYEDATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDS 360
           ++ ++ LDYE+  F+E++++AQDGPG LT+AKV++TVLDVNDNAPE  MTS +SS+ ED+
Sbjct: 301 ISTLEGLDYEETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDT 360

Query: 361 LPGTIIGLFNVHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNI 420
             GT+I LF + DRDSG+N   TC++PE+LPFKLEKS+DNYYRLVTT+ LDRE  S YNI
Sbjct: 361 PLGTVIALFYLQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNI 420

Query: 421 TLTAKDGGNPSLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPD 480
           TL A DGG P LS + HI +QVAD NDN P F  +SYS YI ENNPRGAS+F VTA D D
Sbjct: 421 TLKATDGGTPPLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHD 480

Query: 481 SNDNAHVTYSFAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNP 540
           S DNA +TYS AEDT+QGAP+SSY+SINSDTGVLYAL+SFDYEQLR+LQ+ V A DSG+P
Sbjct: 481 SEDNAQITYSLAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDP 540

Query: 541 PLSSNVSLSLFVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
           PLSSN+SLSLFVLDQNDN PEILYPA PTDGSTG+ELAPRSAEPGYLVTKVVAVD+DSGQ
Sbjct: 541 PLSSNMSLSLFVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQ 600

Query: 601 NAWLSYHLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTL 660
           NAWLSY LLKASEPGLF+VGL+TGEVRTARALLDRDALKQSLVVA+QDHGQPPLSATVTL
Sbjct: 601 NAWLSYLLLKASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660

Query: 661 TVAVADRIPDILADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWH 720
           TVAVAD IP++LADLGSLEPS  P + DLTLYLVVAVA VSCVFLAFV+VLLA RLRRWH
Sbjct: 661 TVAVADSIPEVLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWH 720

Query: 721 KSRLLQASGGSLTGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
           KSRLLQAS G L  + +SHFVG+DGV+AFLQTYSHEVSLTADSRKSHLIFPQPNY D LI
Sbjct: 721 KSRLLQASEGGLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLI 780

Query: 781 SQESCEKKDFL 791
           SQESCEK D L
Sbjct: 781 SQESCEKNDSL 791


>gi|7662056 protocadherin gamma subfamily A, 8 isoform 2 precursor
           [Homo sapiens]
          Length = 820

 Score = 1091 bits (2821), Expect = 0.0
 Identities = 563/809 (69%), Positives = 640/809 (79%)

Query: 1   MAALQKLPHCRKLVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALA 60
           MAA Q  P   +L+LLC LL TLWE   GQIRYSV EE D+GSFVGNI+KDLGL+P  LA
Sbjct: 1   MAAPQSRPRRGELILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLA 60

Query: 61  EQGVRIVSRGRSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVE 120
           + GVRIVSRGR+QLFALNPRSGSL+TA RIDREELCAQS  CL+N N L+EDK  ++ VE
Sbjct: 61  KHGVRIVSRGRTQLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVE 120

Query: 121 VEITDINDNAPRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSL 180
           +EI DINDN P+F VE+LE+KI+E   PG R PL  A D DVG N+LQ Y L+PN HFSL
Sbjct: 121 IEIIDINDNNPKFQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSL 180

Query: 181 DVRRGADGNKYPELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAP 240
           DV+ G +G   PELVLER+LDREEEA HHLVL ASDGG P  S T RI V VLD NDNAP
Sbjct: 181 DVQTGDNGAINPELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAP 240

Query: 241 VFTQPEYRISIPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGE 300
           VF  P YR+ + EN   GTR+LTVTA+D DEG   +V Y   K   + + +F+L   +GE
Sbjct: 241 VFPHPIYRVKVLENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGE 300

Query: 301 LTIIKDLDYEDATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDS 360
           ++I K LDYE+ +F+E++I+A+D   LL R K++++V DVNDN PE  +TS  S V E+S
Sbjct: 301 ISIAKSLDYEECSFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENS 360

Query: 361 LPGTIIGLFNVHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNI 420
           LPGT+I   +VHD+DSG+N    C   ++LPFKLEKS+ NYYRLVT + LDRE  S YNI
Sbjct: 361 LPGTVIAFLSVHDQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNI 420

Query: 421 TLTAKDGGNPSLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPD 480
           T+ A D G P LST+  I L VADINDN P F   SYS YI ENN RGAS+FS+TAHDPD
Sbjct: 421 TVMASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPD 480

Query: 481 SNDNAHVTYSFAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNP 540
           S +NA VTYS  EDT+QGAPLSSYISINSDTGVLYAL+SFDYEQ+RDLQ+ V A DSG+P
Sbjct: 481 SQENAQVTYSVTEDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDP 540

Query: 541 PLSSNVSLSLFVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
           PLSSN+SLSLFVLDQNDNAPEILYPA PTDGSTGVELAPRSAE GYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNMSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQ 600

Query: 601 NAWLSYHLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTL 660
           NAWLSY LLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVA+QDHGQPPLSATVTL
Sbjct: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660

Query: 661 TVAVADRIPDILADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWH 720
           TVAVAD IP++L +LGSL+PS  PNDS LTLYLVVAVAA+SCVFLAFV VLL  RLRRWH
Sbjct: 661 TVAVADSIPEVLTELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWH 720

Query: 721 KSRLLQASGGSLTGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
           KSRLLQ SGG L G+ +SHFVGV+ V+AFLQTYS EVSLTADSRKSHLIFPQPNYAD LI
Sbjct: 721 KSRLLQDSGGRLVGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLI 780

Query: 781 SQESCEKKDFLSAPQSLLEEEREETFSQV 809
           SQE CEK D L       E + E    QV
Sbjct: 781 SQEGCEKNDSLLTSVDFHEYKNEADHGQV 809


>gi|14270484 protocadherin gamma subfamily A, 8 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score = 1089 bits (2817), Expect = 0.0
 Identities = 562/808 (69%), Positives = 639/808 (79%)

Query: 1   MAALQKLPHCRKLVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALA 60
           MAA Q  P   +L+LLC LL TLWE   GQIRYSV EE D+GSFVGNI+KDLGL+P  LA
Sbjct: 1   MAAPQSRPRRGELILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLA 60

Query: 61  EQGVRIVSRGRSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVE 120
           + GVRIVSRGR+QLFALNPRSGSL+TA RIDREELCAQS  CL+N N L+EDK  ++ VE
Sbjct: 61  KHGVRIVSRGRTQLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVE 120

Query: 121 VEITDINDNAPRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSL 180
           +EI DINDN P+F VE+LE+KI+E   PG R PL  A D DVG N+LQ Y L+PN HFSL
Sbjct: 121 IEIIDINDNNPKFQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSL 180

Query: 181 DVRRGADGNKYPELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAP 240
           DV+ G +G   PELVLER+LDREEEA HHLVL ASDGG P  S T RI V VLD NDNAP
Sbjct: 181 DVQTGDNGAINPELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAP 240

Query: 241 VFTQPEYRISIPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGE 300
           VF  P YR+ + EN   GTR+LTVTA+D DEG   +V Y   K   + + +F+L   +GE
Sbjct: 241 VFPHPIYRVKVLENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGE 300

Query: 301 LTIIKDLDYEDATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDS 360
           ++I K LDYE+ +F+E++I+A+D   LL R K++++V DVNDN PE  +TS  S V E+S
Sbjct: 301 ISIAKSLDYEECSFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENS 360

Query: 361 LPGTIIGLFNVHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNI 420
           LPGT+I   +VHD+DSG+N    C   ++LPFKLEKS+ NYYRLVT + LDRE  S YNI
Sbjct: 361 LPGTVIAFLSVHDQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNI 420

Query: 421 TLTAKDGGNPSLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPD 480
           T+ A D G P LST+  I L VADINDN P F   SYS YI ENN RGAS+FS+TAHDPD
Sbjct: 421 TVMASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPD 480

Query: 481 SNDNAHVTYSFAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNP 540
           S +NA VTYS  EDT+QGAPLSSYISINSDTGVLYAL+SFDYEQ+RDLQ+ V A DSG+P
Sbjct: 481 SQENAQVTYSVTEDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDP 540

Query: 541 PLSSNVSLSLFVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
           PLSSN+SLSLFVLDQNDNAPEILYPA PTDGSTGVELAPRSAE GYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNMSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQ 600

Query: 601 NAWLSYHLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTL 660
           NAWLSY LLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVA+QDHGQPPLSATVTL
Sbjct: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660

Query: 661 TVAVADRIPDILADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWH 720
           TVAVAD IP++L +LGSL+PS  PNDS LTLYLVVAVAA+SCVFLAFV VLL  RLRRWH
Sbjct: 661 TVAVADSIPEVLTELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWH 720

Query: 721 KSRLLQASGGSLTGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
           KSRLLQ SGG L G+ +SHFVGV+ V+AFLQTYS EVSLTADSRKSHLIFPQPNYAD LI
Sbjct: 721 KSRLLQDSGGRLVGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLI 780

Query: 781 SQESCEKKDFLSAPQSLLEEEREETFSQ 808
           SQE CEK D L       E + E    Q
Sbjct: 781 SQEGCEKNDSLLTSVDFHEYKNEADHGQ 808


>gi|14196457 protocadherin gamma subfamily A, 12 isoform 2 precursor
           [Homo sapiens]
          Length = 820

 Score = 1087 bits (2812), Expect = 0.0
 Identities = 561/806 (69%), Positives = 645/806 (80%), Gaps = 5/806 (0%)

Query: 13  LVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALAEQGVRIVSRGRS 72
           LVLL  LL TLWE    QIRYSV EE+++GS VG+I++DLGLEP  LAE+GVRI+ RGR+
Sbjct: 13  LVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRIIPRGRT 72

Query: 73  QLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVEVEITDINDNAPR 132
           QLFALNPRSGSLVTA RIDREELC  +  C LN +IL+EDK+ IY VEVE+ DINDNAP 
Sbjct: 73  QLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDINDNAPY 132

Query: 133 FGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSLDVRRGADGNKYP 192
           F   ELE+KISE      R PL +A D D+G+N+LQ Y L+PN HFSL V+ GADG+KYP
Sbjct: 133 FRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGADGSKYP 192

Query: 193 ELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAPVFTQPEYRISIP 252
           ELVL+R+LDREE+A HHLVL ASDGGDPV +GT+RI V VLDANDNAP F QPEYR S+P
Sbjct: 193 ELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYRASVP 252

Query: 253 ENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGELTIIKDLDYEDA 312
           EN  +GT++L V ATD DEG  A+V Y       + ++VF+L   SG ++ I +LD+E++
Sbjct: 253 ENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGELDHEES 312

Query: 313 TFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDSLPGTIIGLFNVH 372
            F++++++A D  G   RAKV++TVLDVNDNAPE  +TS  SSV E+S  GT+I L NV+
Sbjct: 313 GFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIALLNVN 372

Query: 373 DRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNITLTAKDGGNPSL 432
           D+DS +N    C +  +LPFKLEKS  NYY LVT   LDREQ   YNIT+TA D G P L
Sbjct: 373 DQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDRGTPPL 432

Query: 433 STDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPDSNDNAHVTYSFA 492
           ST+ HI L VAD NDN P F + SYS YIPENNPRG S+ SVTAHDPD  +NA +TYS A
Sbjct: 433 STETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQITYSLA 492

Query: 493 EDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNPPLSSNVSLSLFV 552
           E+T+QGA LSSY+SINSDTGVLYAL SFDYEQ RDLQV V+ARD+G+PPLSSNVSLSLFV
Sbjct: 493 ENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVSLSLFV 552

Query: 553 LDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYHLLKAS 612
           LDQNDNAPEILYPA PTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSY LLKAS
Sbjct: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612

Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTLTVAVADRIPDIL 672
           EPGLFSVGLHTGEVRTARALLDRDALKQSLVVA+QDHGQPPLSATVTLTVAVAD IP +L
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVL 672

Query: 673 ADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGSL 732
           ADLGSLE  A    SDLTLYLVVAVAAVSCVFLAFVI+LLA RLRRWHKSRLLQASGG L
Sbjct: 673 ADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQASGGGL 732

Query: 733 TGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKKD-FL 791
           TG  +SHFVGVDGV+AFLQTYSHEVSLT DSRKSHLIFPQPNYAD L+SQES EK +  L
Sbjct: 733 TGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLVSQESFEKSEPLL 792

Query: 792 SAPQSLLEEER----EETFSQVIYLF 813
            +  S+  ++     E +  Q+ +LF
Sbjct: 793 LSGDSVFSKDSHGLIEVSLYQIFFLF 818


>gi|8850232 protocadherin gamma subfamily A, 12 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score = 1086 bits (2808), Expect = 0.0
 Identities = 555/777 (71%), Positives = 632/777 (81%)

Query: 13  LVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALAEQGVRIVSRGRS 72
           LVLL  LL TLWE    QIRYSV EE+++GS VG+I++DLGLEP  LAE+GVRI+ RGR+
Sbjct: 13  LVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRIIPRGRT 72

Query: 73  QLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVEVEITDINDNAPR 132
           QLFALNPRSGSLVTA RIDREELC  +  C LN +IL+EDK+ IY VEVE+ DINDNAP 
Sbjct: 73  QLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDINDNAPY 132

Query: 133 FGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSLDVRRGADGNKYP 192
           F   ELE+KISE      R PL +A D D+G+N+LQ Y L+PN HFSL V+ GADG+KYP
Sbjct: 133 FRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGADGSKYP 192

Query: 193 ELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAPVFTQPEYRISIP 252
           ELVL+R+LDREE+A HHLVL ASDGGDPV +GT+RI V VLDANDNAP F QPEYR S+P
Sbjct: 193 ELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYRASVP 252

Query: 253 ENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGELTIIKDLDYEDA 312
           EN  +GT++L V ATD DEG  A+V Y       + ++VF+L   SG ++ I +LD+E++
Sbjct: 253 ENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGELDHEES 312

Query: 313 TFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDSLPGTIIGLFNVH 372
            F++++++A D  G   RAKV++TVLDVNDNAPE  +TS  SSV E+S  GT+I L NV+
Sbjct: 313 GFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIALLNVN 372

Query: 373 DRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNITLTAKDGGNPSL 432
           D+DS +N    C +  +LPFKLEKS  NYY LVT   LDREQ   YNIT+TA D G P L
Sbjct: 373 DQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDRGTPPL 432

Query: 433 STDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPDSNDNAHVTYSFA 492
           ST+ HI L VAD NDN P F + SYS YIPENNPRG S+ SVTAHDPD  +NA +TYS A
Sbjct: 433 STETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQITYSLA 492

Query: 493 EDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNPPLSSNVSLSLFV 552
           E+T+QGA LSSY+SINSDTGVLYAL SFDYEQ RDLQV V+ARD+G+PPLSSNVSLSLFV
Sbjct: 493 ENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVSLSLFV 552

Query: 553 LDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYHLLKAS 612
           LDQNDNAPEILYPA PTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSY LLKAS
Sbjct: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612

Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTLTVAVADRIPDIL 672
           EPGLFSVGLHTGEVRTARALLDRDALKQSLVVA+QDHGQPPLSATVTLTVAVAD IP +L
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVL 672

Query: 673 ADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGSL 732
           ADLGSLE  A    SDLTLYLVVAVAAVSCVFLAFVI+LLA RLRRWHKSRLLQASGG L
Sbjct: 673 ADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQASGGGL 732

Query: 733 TGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKKD 789
           TG  +SHFVGVDGV+AFLQTYSHEVSLT DSRKSHLIFPQPNYAD L+SQES EK +
Sbjct: 733 TGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLVSQESFEKSE 789


>gi|14196451 protocadherin gamma subfamily A, 11 isoform 2 precursor
           [Homo sapiens]
          Length = 837

 Score = 1061 bits (2744), Expect = 0.0
 Identities = 544/811 (67%), Positives = 639/811 (78%), Gaps = 2/811 (0%)

Query: 4   LQKLPHCRKLVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALAEQG 63
           LQ+    R L+LLC  L TL   RA QIRYSV EE ++GSFVGNI+KDLGLEP  LA++G
Sbjct: 5   LQRGDRSRLLLLLCIFLGTLRGFRARQIRYSVPEETEKGSFVGNISKDLGLEPRELAKRG 64

Query: 64  VRIVSRGRSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVEVEI 123
           VRIVSRG++QLFA+NPRSGSL+TA RIDREELC   + C LN  +L+ED L IY VEVEI
Sbjct: 65  VRIVSRGKTQLFAVNPRSGSLITAGRIDREELCETVSSCFLNMELLVEDTLKIYGVEVEI 124

Query: 124 TDINDNAPRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSLDVR 183
            DINDNAP F  +E+E+K+SE   PG R  L NA D DVG N+LQ Y L+PN++FSL +R
Sbjct: 125 IDINDNAPSFQEDEVEIKVSEHAIPGARFALPNARDPDVGVNSLQSYQLSPNNYFSLQLR 184

Query: 184 RGADGNKYPELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAPVFT 243
              DG K PELVLE SLDRE+EA H L+L A DGGDP+  G   I V VLD ND+ P+FT
Sbjct: 185 GRTDGAKNPELVLEGSLDREKEAAHLLLLTALDGGDPIRKGAVPIRVVVLDVNDHIPMFT 244

Query: 244 QPEYRISIPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGELTI 303
           Q  YR+S+PEN   GTR+L V ATD DEG   +V+Y       + SE+F+L S +GE+ +
Sbjct: 245 QSVYRVSVPENISSGTRVLMVNATDPDEGINGEVMYSFRNMESKASEIFQLDSQTGEVQV 304

Query: 304 IKDLDYEDATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDSLPG 363
              LD+E   F+E++I+ QDG GL T   +++TV+DVNDNAPE  +TS+ +S+ E+S PG
Sbjct: 305 RGSLDFEKYRFYEMEIQGQDGGGLFTTTTMLITVVDVNDNAPEITITSSINSILENSPPG 364

Query: 364 TIIGLFNVHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNITLT 423
           T+I L NV D+DSG+N   +C +P  LPFKLEK+  NYY+L+T+R LDRE    YNITLT
Sbjct: 365 TVIALLNVQDQDSGENGQVSCFIPNHLPFKLEKTYGNYYKLITSRVLDRELVQSYNITLT 424

Query: 424 AKDGGNPSLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPDSND 483
           A D G+P LS + H+ L VAD NDN P F  +SYS YIPENNPRGAS+FSVTA DPDS  
Sbjct: 425 ATDQGSPPLSAETHVWLNVADDNDNPPVFPHSSYSAYIPENNPRGASIFSVTALDPDSKQ 484

Query: 484 NAHVTYSFAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNPPLS 543
           NA VTYS  +DTVQG PLSSY+SINS+TGVLYAL+SFDYEQ RDL++ VIARDSG+PPLS
Sbjct: 485 NALVTYSLTDDTVQGVPLSSYVSINSNTGVLYALQSFDYEQFRDLELRVIARDSGDPPLS 544

Query: 544 SNVSLSLFVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAW 603
           SNVSLSLFVLDQNDNAPEILYPA PTDGSTGVELAPRSAEPGYLVTKVVAVD+DSGQNAW
Sbjct: 545 SNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAW 604

Query: 604 LSYHLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTLTVA 663
           LSY LLKASEPGLF+VG HTGEVRTARALLDRDALKQSLVVA+QDHGQPPLSATVTLTVA
Sbjct: 605 LSYRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVA 664

Query: 664 VADRIPDILADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSR 723
           VAD IP++LADLGSLE  A    SDL+LYLVVAVAAVSC+FL FVIVLLA RL RWHKSR
Sbjct: 665 VADSIPEVLADLGSLESLANSETSDLSLYLVVAVAAVSCIFLVFVIVLLALRLWRWHKSR 724

Query: 724 LLQASGGSLTGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQE 783
           LLQAS G L GM +SHFVGVDGV+AFLQTYSHEVSL ADS+KSHLIFPQPNY DTLISQE
Sbjct: 725 LLQASEGGLAGMPTSHFVGVDGVQAFLQTYSHEVSLIADSQKSHLIFPQPNYGDTLISQE 784

Query: 784 SCEKKD--FLSAPQSLLEEEREETFSQVIYL 812
           SCEK +   ++   +++  + + T +QV ++
Sbjct: 785 SCEKSEPLLIAEDSAIILGKCDPTSNQVRFI 815


>gi|11128039 protocadherin gamma subfamily A, 11 isoform 1 precursor
           [Homo sapiens]
          Length = 935

 Score = 1060 bits (2742), Expect = 0.0
 Identities = 541/786 (68%), Positives = 626/786 (79%)

Query: 4   LQKLPHCRKLVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALAEQG 63
           LQ+    R L+LLC  L TL   RA QIRYSV EE ++GSFVGNI+KDLGLEP  LA++G
Sbjct: 5   LQRGDRSRLLLLLCIFLGTLRGFRARQIRYSVPEETEKGSFVGNISKDLGLEPRELAKRG 64

Query: 64  VRIVSRGRSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVEVEI 123
           VRIVSRG++QLFA+NPRSGSL+TA RIDREELC   + C LN  +L+ED L IY VEVEI
Sbjct: 65  VRIVSRGKTQLFAVNPRSGSLITAGRIDREELCETVSSCFLNMELLVEDTLKIYGVEVEI 124

Query: 124 TDINDNAPRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSLDVR 183
            DINDNAP F  +E+E+K+SE   PG R  L NA D DVG N+LQ Y L+PN++FSL +R
Sbjct: 125 IDINDNAPSFQEDEVEIKVSEHAIPGARFALPNARDPDVGVNSLQSYQLSPNNYFSLQLR 184

Query: 184 RGADGNKYPELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAPVFT 243
              DG K PELVLE SLDRE+EA H L+L A DGGDP+  G   I V VLD ND+ P+FT
Sbjct: 185 GRTDGAKNPELVLEGSLDREKEAAHLLLLTALDGGDPIRKGAVPIRVVVLDVNDHIPMFT 244

Query: 244 QPEYRISIPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGELTI 303
           Q  YR+S+PEN   GTR+L V ATD DEG   +V+Y       + SE+F+L S +GE+ +
Sbjct: 245 QSVYRVSVPENISSGTRVLMVNATDPDEGINGEVMYSFRNMESKASEIFQLDSQTGEVQV 304

Query: 304 IKDLDYEDATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDSLPG 363
              LD+E   F+E++I+ QDG GL T   +++TV+DVNDNAPE  +TS+ +S+ E+S PG
Sbjct: 305 RGSLDFEKYRFYEMEIQGQDGGGLFTTTTMLITVVDVNDNAPEITITSSINSILENSPPG 364

Query: 364 TIIGLFNVHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNITLT 423
           T+I L NV D+DSG+N   +C +P  LPFKLEK+  NYY+L+T+R LDRE    YNITLT
Sbjct: 365 TVIALLNVQDQDSGENGQVSCFIPNHLPFKLEKTYGNYYKLITSRVLDRELVQSYNITLT 424

Query: 424 AKDGGNPSLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPDSND 483
           A D G+P LS + H+ L VAD NDN P F  +SYS YIPENNPRGAS+FSVTA DPDS  
Sbjct: 425 ATDQGSPPLSAETHVWLNVADDNDNPPVFPHSSYSAYIPENNPRGASIFSVTALDPDSKQ 484

Query: 484 NAHVTYSFAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNPPLS 543
           NA VTYS  +DTVQG PLSSY+SINS+TGVLYAL+SFDYEQ RDL++ VIARDSG+PPLS
Sbjct: 485 NALVTYSLTDDTVQGVPLSSYVSINSNTGVLYALQSFDYEQFRDLELRVIARDSGDPPLS 544

Query: 544 SNVSLSLFVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAW 603
           SNVSLSLFVLDQNDNAPEILYPA PTDGSTGVELAPRSAEPGYLVTKVVAVD+DSGQNAW
Sbjct: 545 SNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAW 604

Query: 604 LSYHLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTLTVA 663
           LSY LLKASEPGLF+VG HTGEVRTARALLDRDALKQSLVVA+QDHGQPPLSATVTLTVA
Sbjct: 605 LSYRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVA 664

Query: 664 VADRIPDILADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSR 723
           VAD IP++LADLGSLE  A    SDL+LYLVVAVAAVSC+FL FVIVLLA RL RWHKSR
Sbjct: 665 VADSIPEVLADLGSLESLANSETSDLSLYLVVAVAAVSCIFLVFVIVLLALRLWRWHKSR 724

Query: 724 LLQASGGSLTGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQE 783
           LLQAS G L GM +SHFVGVDGV+AFLQTYSHEVSL ADS+KSHLIFPQPNY DTLISQE
Sbjct: 725 LLQASEGGLAGMPTSHFVGVDGVQAFLQTYSHEVSLIADSQKSHLIFPQPNYGDTLISQE 784

Query: 784 SCEKKD 789
           SCEK +
Sbjct: 785 SCEKSE 790


>gi|11128043 protocadherin gamma subfamily A, 9 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score = 1053 bits (2723), Expect = 0.0
 Identities = 542/789 (68%), Positives = 625/789 (79%)

Query: 1   MAALQKLPHCRKLVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALA 60
           MAA  K     +LVLLC LL  LWEARA QIRYSV EE ++G  VGNI+KDL LEP  LA
Sbjct: 1   MAAPTKCQLRGRLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELA 60

Query: 61  EQGVRIVSRGRSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVE 120
           E+ VRIVSRGR+QLF+LNPRSG+LVTA RIDREELCAQS  CL+NF +L+ED++ +Y +E
Sbjct: 61  ERRVRIVSRGRTQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIE 120

Query: 121 VEITDINDNAPRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSL 180
           +E+TDIND+AP+F  E LE+KI+E   PG R PL  A D DVG N+LQ Y L+PN HFSL
Sbjct: 121 IEVTDINDSAPKFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSL 180

Query: 181 DVRRGADGNKYPELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAP 240
           +V+ G +G   PELVLER+LDREE   HHLVL ASDGG+P  S T RI V VLD NDNAP
Sbjct: 181 NVQTGDNGAINPELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAP 240

Query: 241 VFTQPEYRISIPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGE 300
           VF Q  YR+ + EN   GT +LT TA+D DEG   +V Y   K   + S +F+L   +GE
Sbjct: 241 VFAQRIYRVKVLENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGE 300

Query: 301 LTIIKDLDYEDATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDS 360
           ++  K LDYE+ +F+E++I+A+DG GL    KV+++V DVNDN PE  +TS  S V ED+
Sbjct: 301 ISTAKSLDYEECSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDA 360

Query: 361 LPGTIIGLFNVHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNI 420
             GT+I LFN HDRDSG+N    CS+ E+L F LE S ++YYRL+T + LDRE+ S YNI
Sbjct: 361 PQGTVILLFNAHDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNI 420

Query: 421 TLTAKDGGNPSLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPD 480
           T+TA D G P LST+ HI LQV DINDN PAFS+ SYS Y+PENN RG S+FSV A+DPD
Sbjct: 421 TVTATDRGTPPLSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPD 480

Query: 481 SNDNAHVTYSFAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNP 540
           SN+N+ V YS AEDT+QG+PLS+Y+SINSDTGVLYAL SFDYEQ RDLQ+ V A DSG+P
Sbjct: 481 SNENSRVIYSLAEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSP 540

Query: 541 PLSSNVSLSLFVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
           PLSSNVSL LFVLDQNDNAPEILYPA PTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLRLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600

Query: 601 NAWLSYHLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTL 660
           NAWLSY L KASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVA+QDHGQPPLSATVTL
Sbjct: 601 NAWLSYRLFKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660

Query: 661 TVAVADRIPDILADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWH 720
           TVA+AD IPDILADLGSL+  A    SDLTLYLVVAVA VSCVFL FVI LLA RLR WH
Sbjct: 661 TVAIADSIPDILADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWH 720

Query: 721 KSRLLQASGGSLTGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
            S LL+A+   L G+ +SHFVGVDGVRAFLQTYS E SLTADSRKSHLIFPQPNYADTLI
Sbjct: 721 SSHLLRATSDGLAGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLI 780

Query: 781 SQESCEKKD 789
           SQ+SCEK +
Sbjct: 781 SQQSCEKNE 789


>gi|14270487 protocadherin gamma subfamily A, 9 isoform 2 precursor
           [Homo sapiens]
          Length = 828

 Score = 1053 bits (2723), Expect = 0.0
 Identities = 542/789 (68%), Positives = 625/789 (79%)

Query: 1   MAALQKLPHCRKLVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALA 60
           MAA  K     +LVLLC LL  LWEARA QIRYSV EE ++G  VGNI+KDL LEP  LA
Sbjct: 1   MAAPTKCQLRGRLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELA 60

Query: 61  EQGVRIVSRGRSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVE 120
           E+ VRIVSRGR+QLF+LNPRSG+LVTA RIDREELCAQS  CL+NF +L+ED++ +Y +E
Sbjct: 61  ERRVRIVSRGRTQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIE 120

Query: 121 VEITDINDNAPRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSL 180
           +E+TDIND+AP+F  E LE+KI+E   PG R PL  A D DVG N+LQ Y L+PN HFSL
Sbjct: 121 IEVTDINDSAPKFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSL 180

Query: 181 DVRRGADGNKYPELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAP 240
           +V+ G +G   PELVLER+LDREE   HHLVL ASDGG+P  S T RI V VLD NDNAP
Sbjct: 181 NVQTGDNGAINPELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAP 240

Query: 241 VFTQPEYRISIPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGE 300
           VF Q  YR+ + EN   GT +LT TA+D DEG   +V Y   K   + S +F+L   +GE
Sbjct: 241 VFAQRIYRVKVLENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGE 300

Query: 301 LTIIKDLDYEDATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDS 360
           ++  K LDYE+ +F+E++I+A+DG GL    KV+++V DVNDN PE  +TS  S V ED+
Sbjct: 301 ISTAKSLDYEECSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDA 360

Query: 361 LPGTIIGLFNVHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNI 420
             GT+I LFN HDRDSG+N    CS+ E+L F LE S ++YYRL+T + LDRE+ S YNI
Sbjct: 361 PQGTVILLFNAHDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNI 420

Query: 421 TLTAKDGGNPSLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPD 480
           T+TA D G P LST+ HI LQV DINDN PAFS+ SYS Y+PENN RG S+FSV A+DPD
Sbjct: 421 TVTATDRGTPPLSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPD 480

Query: 481 SNDNAHVTYSFAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNP 540
           SN+N+ V YS AEDT+QG+PLS+Y+SINSDTGVLYAL SFDYEQ RDLQ+ V A DSG+P
Sbjct: 481 SNENSRVIYSLAEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSP 540

Query: 541 PLSSNVSLSLFVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
           PLSSNVSL LFVLDQNDNAPEILYPA PTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLRLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600

Query: 601 NAWLSYHLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTL 660
           NAWLSY L KASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVA+QDHGQPPLSATVTL
Sbjct: 601 NAWLSYRLFKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660

Query: 661 TVAVADRIPDILADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWH 720
           TVA+AD IPDILADLGSL+  A    SDLTLYLVVAVA VSCVFL FVI LLA RLR WH
Sbjct: 661 TVAIADSIPDILADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWH 720

Query: 721 KSRLLQASGGSLTGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
            S LL+A+   L G+ +SHFVGVDGVRAFLQTYS E SLTADSRKSHLIFPQPNYADTLI
Sbjct: 721 SSHLLRATSDGLAGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLI 780

Query: 781 SQESCEKKD 789
           SQ+SCEK +
Sbjct: 781 SQQSCEKNE 789


>gi|14196455 protocadherin gamma subfamily A, 11 isoform 3 precursor
           [Homo sapiens]
          Length = 750

 Score =  798 bits (2061), Expect = 0.0
 Identities = 403/622 (64%), Positives = 479/622 (77%)

Query: 4   LQKLPHCRKLVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALAEQG 63
           LQ+    R L+LLC  L TL   RA QIRYSV EE ++GSFVGNI+KDLGLEP  LA++G
Sbjct: 5   LQRGDRSRLLLLLCIFLGTLRGFRARQIRYSVPEETEKGSFVGNISKDLGLEPRELAKRG 64

Query: 64  VRIVSRGRSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVEVEI 123
           VRIVSRG++QLFA+NPRSGSL+TA RIDREELC   + C LN  +L+ED L IY VEVEI
Sbjct: 65  VRIVSRGKTQLFAVNPRSGSLITAGRIDREELCETVSSCFLNMELLVEDTLKIYGVEVEI 124

Query: 124 TDINDNAPRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSLDVR 183
            DINDNAP F  +E+E+K+SE   PG R  L NA D DVG N+LQ Y L+PN++FSL +R
Sbjct: 125 IDINDNAPSFQEDEVEIKVSEHAIPGARFALPNARDPDVGVNSLQSYQLSPNNYFSLQLR 184

Query: 184 RGADGNKYPELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAPVFT 243
              DG K PELVLE SLDRE+EA H L+L A DGGDP+  G   I V VLD ND+ P+FT
Sbjct: 185 GRTDGAKNPELVLEGSLDREKEAAHLLLLTALDGGDPIRKGAVPIRVVVLDVNDHIPMFT 244

Query: 244 QPEYRISIPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGELTI 303
           Q  YR+S+PEN   GTR+L V ATD DEG   +V+Y       + SE+F+L S +GE+ +
Sbjct: 245 QSVYRVSVPENISSGTRVLMVNATDPDEGINGEVMYSFRNMESKASEIFQLDSQTGEVQV 304

Query: 304 IKDLDYEDATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDSLPG 363
              LD+E   F+E++I+ QDG GL T   +++TV+DVNDNAPE  +TS+ +S+ E+S PG
Sbjct: 305 RGSLDFEKYRFYEMEIQGQDGGGLFTTTTMLITVVDVNDNAPEITITSSINSILENSPPG 364

Query: 364 TIIGLFNVHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNITLT 423
           T+I L NV D+DSG+N   +C +P  LPFKLEK+  NYY+L+T+R LDRE    YNITLT
Sbjct: 365 TVIALLNVQDQDSGENGQVSCFIPNHLPFKLEKTYGNYYKLITSRVLDRELVQSYNITLT 424

Query: 424 AKDGGNPSLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPDSND 483
           A D G+P LS + H+ L VAD NDN P F  +SYS YIPENNPRGAS+FSVTA DPDS  
Sbjct: 425 ATDQGSPPLSAETHVWLNVADDNDNPPVFPHSSYSAYIPENNPRGASIFSVTALDPDSKQ 484

Query: 484 NAHVTYSFAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNPPLS 543
           NA VTYS  +DTVQG PLSSY+SINS+TGVLYAL+SFDYEQ RDL++ VIARDSG+PPLS
Sbjct: 485 NALVTYSLTDDTVQGVPLSSYVSINSNTGVLYALQSFDYEQFRDLELRVIARDSGDPPLS 544

Query: 544 SNVSLSLFVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAW 603
           SNVSLSLFVLDQNDNAPEILYPA PTDGSTGVELAPRSAEPGYLVTKVVAVD+DSGQNAW
Sbjct: 545 SNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAW 604

Query: 604 LSYHLLKASEPGLFSVGLHTGE 625
           LSY LLKASEPGLF+VG HTGE
Sbjct: 605 LSYRLLKASEPGLFAVGEHTGE 626



 Score =  163 bits (413), Expect = 5e-40
 Identities = 152/519 (29%), Positives = 225/519 (43%), Gaps = 47/519 (9%)

Query: 230 VKVLDANDNAPVFTQPEYRISIPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETS 289
           V+++D NDNAP F + E  I + E+ + G R     A D D G  +   Y L  SP    
Sbjct: 122 VEIIDINDNAPSFQEDEVEIKVSEHAIPGARFALPNARDPDVGVNSLQSYQL--SPNNYF 179

Query: 290 EVFELKSTSG----ELTIIKDLDYEDATFHEIDIEAQDGPGLLTRAKVI--VTVLDVNDN 343
            +     T G    EL +   LD E    H + + A DG   + +  V   V VLDVND+
Sbjct: 180 SLQLRGRTDGAKNPELVLEGSLDREKEAAHLLLLTALDGGDPIRKGAVPIRVVVLDVNDH 239

Query: 344 APEFYMTSATSSVSEDSLPGTIIGLFNVHDRDSGQNAFTTCSLPEDLPFKLEK--SVDNY 401
            P F  +    SV E+   GT + + N  D D G N     S   ++  K  +   +D+ 
Sbjct: 240 IPMFTQSVYRVSVPENISSGTRVLMVNATDPDEGINGEVMYSF-RNMESKASEIFQLDSQ 298

Query: 402 YRLVTTR-ALDREQFSFYNITLTAKDGGNPSLSTDAHILLQVADINDNAPAFSRTSYSTY 460
              V  R +LD E++ FY + +  +DGG   L T   +L+ V D+NDNAP  + TS    
Sbjct: 299 TGEVQVRGSLDFEKYRFYEMEIQGQDGGG--LFTTTTMLITVVDVNDNAPEITITSSINS 356

Query: 461 IPENNPRGASVFSVTAHDPDSNDNAHVTYSFAEDTVQGAPLSSYISINSDTGVLYAL--- 517
           I EN+P G  +  +   D DS +N  V+           P      +    G  Y L   
Sbjct: 357 ILENSPPGTVIALLNVQDQDSGENGQVSCFI--------PNHLPFKLEKTYGNYYKLITS 408

Query: 518 RSFDYEQLRDLQVWVIARDSGNPPLSSNVSLSLFVLDQNDNAPEILYPAFPTDGSTGVEL 577
           R  D E ++   + + A D G+PPLS+   + L V D NDN P   + ++          
Sbjct: 409 RVLDRELVQSYNITLTATDQGSPPLSAETHVWLNVADDNDNPPVFPHSSYSA-------Y 461

Query: 578 APRSAEPGYLVTKVVAVDRDSGQNAWLSYHLLKASEPGL-----FSVGLHTGEVRTARAL 632
            P +   G  +  V A+D DS QNA ++Y L   +  G+      S+  +TG +   ++ 
Sbjct: 462 IPENNPRGASIFSVTALDPDSKQNALVTYSLTDDTVQGVPLSSYVSINSNTGVLYALQSF 521

Query: 633 LDRDALKQSLVVAIQDHGQPPLSATVTLTVAVADR---IPDILADLGSLEPSAIPNDSDL 689
                    L V  +D G PPLS+ V+L++ V D+    P+IL         A+P D   
Sbjct: 522 DYEQFRDLELRVIARDSGDPPLSSNVSLSLFVLDQNDNAPEILY-------PALPTDGST 574

Query: 690 TLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQAS 728
            + L    A    +    V V        W   RLL+AS
Sbjct: 575 GVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKAS 613


>gi|9256610 protocadherin beta 15 precursor [Homo sapiens]
          Length = 787

 Score =  673 bits (1736), Expect = 0.0
 Identities = 376/791 (47%), Positives = 499/791 (63%), Gaps = 14/791 (1%)

Query: 5   QKLPHCRKLVLLCFLLATL---WEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALAE 61
           ++ P  R++++L  LL      WE R    RYSV EE +RGSFV N+A DLGL    LAE
Sbjct: 6   ERFPEQRQVLILLLLLEVTLAGWEPR----RYSVMEETERGSFVANLANDLGLGVGELAE 61

Query: 62  QGVRIVSRGRSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVEV 121
           +G R+VS    Q   L+ ++G L+   ++DRE+LC  + PC+++F +LL+  L ++  E+
Sbjct: 62  RGARVVSEDNEQGLQLDLQTGQLILNEKLDREKLCGPTEPCIMHFQVLLKKPLEVFRAEL 121

Query: 122 EITDINDNAPRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSLD 181
            +TDIND++P F   E+ LKI ET++ G   PLK A D DVG N +Q Y ++PN HF + 
Sbjct: 122 LVTDINDHSPEFPEREMTLKIPETSSLGTVFPLKKARDLDVGSNNVQNYNISPNSHFHVS 181

Query: 182 VRRGADGNKYPELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAPV 241
            R   DG KYPELVL+  LDREE+A   L L A DGG P  SGT +I + VLDANDNAP 
Sbjct: 182 TRTRGDGRKYPELVLDTELDREEQAELRLTLTAVDGGSPPRSGTVQILILVLDANDNAPE 241

Query: 242 FTQPEYRISIPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGEL 301
           F Q  Y + +PEN+ VG+ ++ V+A D D G   ++ Y L  S  E  + FEL S SGE+
Sbjct: 242 FVQALYEVQVPENSPVGSLVVKVSARDLDTGTNGEISYSLYYSSQEIDKPFELSSLSGEI 301

Query: 302 TIIKDLDYEDATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDSL 361
            +IK LD+E  + +++DIEA DG GL  +  V V VLDVNDN PE  ++S TS + E+S 
Sbjct: 302 RLIKKLDFETMSSYDLDIEASDGGGLSGKCSVSVKVLDVNDNFPELSISSLTSPIPENS- 360

Query: 362 PGTIIGLFNVHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNIT 421
           P T + LF + DRDSG+N    CS+ +D+PFKL+ SV+N+YRLVT  ALDRE  + YNIT
Sbjct: 361 PETEVALFRIRDRDSGENGKMICSIQDDVPFKLKPSVENFYRLVTEGALDRETRAEYNIT 420

Query: 422 LTAKDGGNPSLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPDS 481
           +T  D G P L T+  I + V+D+NDNAPAF++TSY+ ++ ENN     + SV+A D DS
Sbjct: 421 ITITDLGTPRLKTEQSITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDS 480

Query: 482 NDNAHVTYSFAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNPP 541
             NA VTYS         PL+S +SIN+D G L+AL+S DYE L+  +  V A D G P 
Sbjct: 481 GTNAQVTYSLLPPRDPHLPLTSLVSINTDNGHLFALQSLDYEALQAFEFRVGATDRGFPA 540

Query: 542 LSSNVSLSLFVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQN 601
           LSS   + + VLD NDN+P +LYP      +   EL PR+AEPGYLVTKVVAVD DSGQN
Sbjct: 541 LSSEALVRVLVLDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN 599

Query: 602 AWLSYHLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTLT 661
           AWLSY LLKA+EPGLF V  H GEVRTAR L +RD  K  LVV ++D+G+PP SAT TL 
Sbjct: 600 AWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDVAKHRLVVLVKDNGEPPRSATATLQ 659

Query: 662 VAVADRIPDILADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHK 721
           V + D        L    P+    DS LT+YLVVA+A+VS +FL  V + +A RL R  +
Sbjct: 660 VLLVDGFSQPYLPLPEAAPAQAQADS-LTVYLVVALASVSSLFLFSVFLFVAVRLCR--R 716

Query: 722 SRLLQASGGSL-TGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
           SR       S+  G    H V V G     Q+Y +EV LT  S  +   F +P + + ++
Sbjct: 717 SRAASVGRCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSESNDFKFLKPIFPN-IV 775

Query: 781 SQESCEKKDFL 791
           SQ+S  K +FL
Sbjct: 776 SQDSRRKSEFL 786


>gi|14270499 protocadherin gamma subfamily B, 4 isoform 2 precursor
           [Homo sapiens]
          Length = 803

 Score =  665 bits (1716), Expect = 0.0
 Identities = 349/705 (49%), Positives = 469/705 (66%), Gaps = 5/705 (0%)

Query: 14  VLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALAEQGVRIVSRGRSQ 73
           VL  FLL+    A   QIRY + EE+ +GS VGN+A DLG     L  + +R+ S     
Sbjct: 16  VLFLFLLSLFCPALCEQIRYRIPEEMPKGSVVGNLATDLGFSVQELPTRKLRVSSE--KP 73

Query: 74  LFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVEVEITDINDNAPRF 133
            F ++  SG L+ ++R+DREE+C +   C L F  + E+ L  Y V VEI DIND+ P+F
Sbjct: 74  YFTVSAESGELLVSSRLDREEICGKKPACALEFEAVAENPLNFYHVNVEIEDINDHTPKF 133

Query: 134 GVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSLDVRRGADGNKYPE 193
                EL+ISE+  PG R  L +AHDAD+G N LQ Y L+P+DHFSL  +  +DG+KYPE
Sbjct: 134 TQNSFELQISESAQPGTRFILGSAHDADIGSNTLQNYQLSPSDHFSLINKEKSDGSKYPE 193

Query: 194 LVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAPVFTQPEYRISIPE 253
           +VL+  LDRE++  +HL L A D G P LS T++I V V DANDNAPVF+Q  YR+S+ E
Sbjct: 194 MVLKTPLDREKQKSYHLTLTALDFGAPPLSSTAQIHVLVTDANDNAPVFSQDVYRVSLSE 253

Query: 254 NTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGELTIIKDLDYEDAT 313
           N   GT +L VTATD DEG  A++ +   ++   T   F+L S +GE+T++  LD+E+  
Sbjct: 254 NVYPGTTVLQVTATDQDEGVNAEITFSFSEASQITQ--FDLNSNTGEITVLNTLDFEEVK 311

Query: 314 FHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDSLPGTIIGLFNVHD 373
            + I +EA+DG G++ +  V V V+D NDNAPE    S  + + ED+  GT I L  V D
Sbjct: 312 EYSIVLEARDGGGMIAQCTVEVEVIDENDNAPEVIFQSLPNLIMEDAELGTHIALLKVRD 371

Query: 374 RDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNITLTAKDGGNPSLS 433
           +DS  N   TC L  D+PFK+  S  N Y+LVT   LDREQ   YNIT+TA D G P LS
Sbjct: 372 KDSRHNGEVTCKLEGDVPFKILTSSRNTYKLVTDAVLDREQNPEYNITVTATDRGKPPLS 431

Query: 434 TDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPDSNDNAHVTYSFAE 493
           + + I L + D+NDNAP FS++SY  ++ ENNP GAS+  V A DPD   N  V+Y    
Sbjct: 432 SSSSITLHIGDVNDNAPVFSQSSYIVHVAENNPPGASISQVRASDPDLGPNGQVSYCIMA 491

Query: 494 DTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNPPLSSNVSLSLFVL 553
             ++   LSSY+SI++++GV++A R+FD+EQLR  ++ + ARD G+P LS+NVSL + V 
Sbjct: 492 SDLEQRELSSYVSISAESGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVD 551

Query: 554 DQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYHLLKASE 613
           D+NDNAP +LYPA   DGS   ++ P +AEPGYLVTKVVAVD DSG NAWLSYH+L+ASE
Sbjct: 552 DRNDNAPRVLYPALGPDGSALFDMVPHAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASE 611

Query: 614 PGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTLTVAVADRIPDILA 673
           PGLFS+GL TGEVRTARAL DRDA++Q L+VA++D GQPPLSAT TL +  AD + ++L 
Sbjct: 612 PGLFSLGLRTGEVRTARALGDRDAVRQRLLVAVRDGGQPPLSATATLHLVFADSLQEVLP 671

Query: 674 DLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRR 718
           D+    P      ++L  YLVVA+A +S +FL  +I+ +A RLRR
Sbjct: 672 DITD-RPDPSDLQAELQFYLVVALALISVLFLVAMILAIALRLRR 715


>gi|13470082 protocadherin gamma subfamily B, 4 isoform 1 precursor
           [Homo sapiens]
          Length = 923

 Score =  665 bits (1716), Expect = 0.0
 Identities = 349/705 (49%), Positives = 469/705 (66%), Gaps = 5/705 (0%)

Query: 14  VLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALAEQGVRIVSRGRSQ 73
           VL  FLL+    A   QIRY + EE+ +GS VGN+A DLG     L  + +R+ S     
Sbjct: 16  VLFLFLLSLFCPALCEQIRYRIPEEMPKGSVVGNLATDLGFSVQELPTRKLRVSSE--KP 73

Query: 74  LFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVEVEITDINDNAPRF 133
            F ++  SG L+ ++R+DREE+C +   C L F  + E+ L  Y V VEI DIND+ P+F
Sbjct: 74  YFTVSAESGELLVSSRLDREEICGKKPACALEFEAVAENPLNFYHVNVEIEDINDHTPKF 133

Query: 134 GVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSLDVRRGADGNKYPE 193
                EL+ISE+  PG R  L +AHDAD+G N LQ Y L+P+DHFSL  +  +DG+KYPE
Sbjct: 134 TQNSFELQISESAQPGTRFILGSAHDADIGSNTLQNYQLSPSDHFSLINKEKSDGSKYPE 193

Query: 194 LVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAPVFTQPEYRISIPE 253
           +VL+  LDRE++  +HL L A D G P LS T++I V V DANDNAPVF+Q  YR+S+ E
Sbjct: 194 MVLKTPLDREKQKSYHLTLTALDFGAPPLSSTAQIHVLVTDANDNAPVFSQDVYRVSLSE 253

Query: 254 NTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGELTIIKDLDYEDAT 313
           N   GT +L VTATD DEG  A++ +   ++   T   F+L S +GE+T++  LD+E+  
Sbjct: 254 NVYPGTTVLQVTATDQDEGVNAEITFSFSEASQITQ--FDLNSNTGEITVLNTLDFEEVK 311

Query: 314 FHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDSLPGTIIGLFNVHD 373
            + I +EA+DG G++ +  V V V+D NDNAPE    S  + + ED+  GT I L  V D
Sbjct: 312 EYSIVLEARDGGGMIAQCTVEVEVIDENDNAPEVIFQSLPNLIMEDAELGTHIALLKVRD 371

Query: 374 RDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNITLTAKDGGNPSLS 433
           +DS  N   TC L  D+PFK+  S  N Y+LVT   LDREQ   YNIT+TA D G P LS
Sbjct: 372 KDSRHNGEVTCKLEGDVPFKILTSSRNTYKLVTDAVLDREQNPEYNITVTATDRGKPPLS 431

Query: 434 TDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPDSNDNAHVTYSFAE 493
           + + I L + D+NDNAP FS++SY  ++ ENNP GAS+  V A DPD   N  V+Y    
Sbjct: 432 SSSSITLHIGDVNDNAPVFSQSSYIVHVAENNPPGASISQVRASDPDLGPNGQVSYCIMA 491

Query: 494 DTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNPPLSSNVSLSLFVL 553
             ++   LSSY+SI++++GV++A R+FD+EQLR  ++ + ARD G+P LS+NVSL + V 
Sbjct: 492 SDLEQRELSSYVSISAESGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVD 551

Query: 554 DQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYHLLKASE 613
           D+NDNAP +LYPA   DGS   ++ P +AEPGYLVTKVVAVD DSG NAWLSYH+L+ASE
Sbjct: 552 DRNDNAPRVLYPALGPDGSALFDMVPHAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASE 611

Query: 614 PGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTLTVAVADRIPDILA 673
           PGLFS+GL TGEVRTARAL DRDA++Q L+VA++D GQPPLSAT TL +  AD + ++L 
Sbjct: 612 PGLFSLGLRTGEVRTARALGDRDAVRQRLLVAVRDGGQPPLSATATLHLVFADSLQEVLP 671

Query: 674 DLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRR 718
           D+    P      ++L  YLVVA+A +S +FL  +I+ +A RLRR
Sbjct: 672 DITD-RPDPSDLQAELQFYLVVALALISVLFLVAMILAIALRLRR 715


>gi|14270490 protocadherin gamma subfamily B, 1 isoform 2 precursor
           [Homo sapiens]
          Length = 810

 Score =  663 bits (1711), Expect = 0.0
 Identities = 354/730 (48%), Positives = 478/730 (65%), Gaps = 8/730 (1%)

Query: 14  VLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALAEQGVRIVSRGRSQ 73
           VL  FLL+    A + QIRY++ EE+  GS VG +AKDLGL    L  + +R+ +     
Sbjct: 14  VLFPFLLSLFCGAISQQIRYTIPEELANGSRVGKLAKDLGLSVRELPTRKLRVSAE---D 70

Query: 74  LFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVEVEITDINDNAPRF 133
            F ++  SG L+   RIDRE++C +   C L F  + E+ + ++ V V I DINDNAPRF
Sbjct: 71  YFNVSLESGDLLVNGRIDREKICGRKLECALEFETVAENPMNVFHVVVVIQDINDNAPRF 130

Query: 134 GVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSLDVRRGADGNKYPE 193
             + ++L+I E+  PG +  L +A DADV  N+L+ Y +NPN +FSL  +   DG+KYP 
Sbjct: 131 VAKGIDLEICESALPGVKFSLDSAQDADVEGNSLKLYTINPNQYFSLSTKESPDGSKYPV 190

Query: 194 LVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAPVFTQPEYRISIPE 253
           L+LE+ LDRE ++ H L+L A DGGDP LSGT+ I ++V DANDNAPVF+Q  YR+S+ E
Sbjct: 191 LLLEKPLDREHQSSHRLILTAMDGGDPPLSGTTHIWIRVTDANDNAPVFSQEVYRVSLQE 250

Query: 254 NTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGELTIIKDLDYEDAT 313
           N   GT +L V ATD DEG  A++ Y    SP  TS +F L   +G++T    LD+E+ +
Sbjct: 251 NVPWGTSVLRVMATDQDEGINAEITYAFLNSPISTS-LFNLNPNTGDITTNGTLDFEETS 309

Query: 314 FHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDSLPGTIIGLFNVHD 373
            + + +EA+DG        V + ++D NDNAPE    S ++ + EDS  GT+I L  V D
Sbjct: 310 RYVLSVEAKDGGVHTAHCNVQIEIVDENDNAPEVTFMSFSNQIPEDSDLGTVIALIKVRD 369

Query: 374 RDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNITLTAKDGGNPSLS 433
           +DSGQN   TC   E++PFKLE +  NYY+LV   AL+REQ + YN+T+ A D G P+LS
Sbjct: 370 KDSGQNGMVTCYTQEEVPFKLESTSKNYYKLVIAGALNREQTADYNVTIIATDKGKPALS 429

Query: 434 TDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPDSNDNAHVTYSFAE 493
           +   I L ++DINDNAP F + SY  ++ ENNP GAS+  V+A DPD   N  V+YS   
Sbjct: 430 SRTSITLHISDINDNAPVFHQASYVVHVSENNPPGASIAQVSASDPDLGPNGRVSYSILA 489

Query: 494 DTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNPPLSSNVSLSLFVL 553
             ++   L SY+S++  +GV++A R+FD+EQLR  ++ + ARD G+P LS+NVSL + V 
Sbjct: 490 SDLEPRELLSYVSVSPQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVG 549

Query: 554 DQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYHLLKASE 613
           D NDNAP +LYPA   DGS   ++ PR+AEPGYLVTKVVAVD DSG NAWLSYH+L+ASE
Sbjct: 550 DLNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASE 609

Query: 614 PGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTLTVAVADRIPDILA 673
           PGLFS+GL TGEVRTARAL DRDA +Q L+VA++D GQPPLSAT TL +  AD + ++L 
Sbjct: 610 PGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLIFADSLQEVLP 669

Query: 674 DLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGSLT 733
           DL S  P      ++L  YLVVA+A +S +FL  VI+ +A RLRR   S  L   G   T
Sbjct: 670 DL-SDRPEPSDPQTELQFYLVVALALISVLFLLAVILAIALRLRR---SSSLDTEGCFQT 725

Query: 734 GMQSSHFVGV 743
           G+ S    GV
Sbjct: 726 GLCSKSGPGV 735


>gi|11128029 protocadherin gamma subfamily B, 6 isoform 1 precursor
           [Homo sapiens]
          Length = 930

 Score =  663 bits (1711), Expect = 0.0
 Identities = 345/705 (48%), Positives = 472/705 (66%), Gaps = 3/705 (0%)

Query: 14  VLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALAEQGVRIVSRGRSQ 73
           VL   LL   +   +  IRYS+ EE+ +GS VGN+AKDLGL  L ++ + +R+ +     
Sbjct: 16  VLFPLLLPLFYPTLSEPIRYSIPEELAKGSVVGNLAKDLGLSVLDVSARKLRVSAEKLH- 74

Query: 74  LFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVEVEITDINDNAPRF 133
            F+++  SG L+  NRIDRE++C +   C L    ++E+ L I+ V V I D+ND+AP+F
Sbjct: 75  -FSVDAESGDLLVKNRIDREQICKERRRCELQLEAVVENPLNIFHVIVVIEDVNDHAPQF 133

Query: 134 GVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSLDVRRGADGNKYPE 193
             +E+ L+I E+ + G R+ L  A D D+  N+++ Y +N N +FSL VR  +DG KYPE
Sbjct: 134 DKKEIHLEIFESASAGTRLSLDPATDPDININSIKDYKINSNPYFSLMVRVNSDGGKYPE 193

Query: 194 LVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAPVFTQPEYRISIPE 253
           L LE+ LDREE+  H L+L A DGGDP  S T+ I + V D NDN PVF++ EYRIS+ E
Sbjct: 194 LSLEKLLDREEQRSHSLILTALDGGDPPRSATAHIEISVKDTNDNPPVFSRDEYRISLSE 253

Query: 254 NTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGELTIIKDLDYEDAT 313
           N   G+ +L VTATD DEG  A++ Y+   +   T  +F L   +G +   +  D+ED  
Sbjct: 254 NLPPGSPVLQVTATDQDEGVNAEINYYFRSTAQSTKHMFSLDEKTGMIKNNQSFDFEDVE 313

Query: 314 FHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDSLPGTIIGLFNVHD 373
            + +++EA+DG GL T+ KVI+ +LD NDN+PE  +TS +  + E+S PG ++ LF   D
Sbjct: 314 RYTMEVEAKDGGGLSTQCKVIIEILDENDNSPEIIITSLSDQILENSPPGMVVALFKTRD 373

Query: 374 RDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNITLTAKDGGNPSLS 433
            D G N    C++  D+PFK+  S +NYY+LVT  ALDREQ   YN+T+ A D G P LS
Sbjct: 374 LDFGGNGEVRCNIETDIPFKIYSSSNNYYKLVTDGALDREQTPEYNVTIVATDRGKPPLS 433

Query: 434 TDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPDSNDNAHVTYSFAE 493
           +   I L VADINDNAP F +TSY  ++ ENNP GAS+  V+A DPD   N H++YS   
Sbjct: 434 SSRSITLYVADINDNAPVFDQTSYVVHVAENNPPGASIAQVSASDPDLGLNGHISYSIVA 493

Query: 494 DTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNPPLSSNVSLSLFVL 553
             ++   +SSY+S+++ +GV++A R+FD+EQLR   + + ARD G+P LS+NVSL + V 
Sbjct: 494 SDLEPLAVSSYVSVSAQSGVVFAQRAFDHEQLRAFALTLQARDHGSPTLSANVSLRVLVG 553

Query: 554 DQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYHLLKASE 613
           D+NDNAP +LYPA   DGS   ++ PRSAEPGYLVTKVVAVD DSG NAWLSYH+L+ASE
Sbjct: 554 DRNDNAPRVLYPALGPDGSAFFDMVPRSAEPGYLVTKVVAVDADSGHNAWLSYHVLQASE 613

Query: 614 PGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTLTVAVADRIPDILA 673
           PGLFS+GL TGEVRTARAL DRDA +Q L+VA++D GQPPLSAT TL +  AD + +IL 
Sbjct: 614 PGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLVFADNLQEILP 673

Query: 674 DLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRR 718
           DL S  P      ++L  YLVVA+A +S +FL  VI+ +A RLRR
Sbjct: 674 DL-SDRPVLSDPQAELQFYLVVALALISVLFLLAVILAIALRLRR 717


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.133    0.380 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,372,478
Number of Sequences: 37866
Number of extensions: 1354331
Number of successful extensions: 9866
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 191
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 2754
Number of HSP's gapped (non-prelim): 616
length of query: 823
length of database: 18,247,518
effective HSP length: 111
effective length of query: 712
effective length of database: 14,044,392
effective search space: 9999607104
effective search space used: 9999607104
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 66 (30.0 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.

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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.