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Search of human proteins with 14195607
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|14195607 protocadherin beta 1 precursor [Homo sapiens]
(818 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|14195607 protocadherin beta 1 precursor [Homo sapiens] 1625 0.0
gi|14195605 protocadherin beta 16 precursor [Homo sapiens] 797 0.0
gi|9256614 protocadherin beta 3 precursor [Homo sapiens] 788 0.0
gi|9256612 protocadherin beta 2 precursor [Homo sapiens] 788 0.0
gi|11036656 protocadherin beta 7 precursor [Homo sapiens] 787 0.0
gi|9256610 protocadherin beta 15 precursor [Homo sapiens] 785 0.0
gi|11036654 protocadherin beta 13 precursor [Homo sapiens] 781 0.0
gi|11276081 protocadherin beta 8 precursor [Homo sapiens] 779 0.0
gi|9256616 protocadherin beta 4 precursor [Homo sapiens] 779 0.0
gi|9256608 protocadherin beta 14 precursor [Homo sapiens] 778 0.0
gi|7661662 protocadherin beta 5 precursor [Homo sapiens] 776 0.0
gi|9256606 protocadherin beta 12 precursor [Homo sapiens] 773 0.0
gi|9256618 protocadherin beta 6 precursor [Homo sapiens] 769 0.0
gi|14195616 protocadherin beta 9 precursor [Homo sapiens] 768 0.0
gi|9256602 protocadherin beta 10 precursor [Homo sapiens] 768 0.0
gi|9256604 protocadherin beta 11 precursor [Homo sapiens] 767 0.0
gi|11056032 protocadherin gamma subfamily A, 1 isoform 1 precurs... 604 e-172
gi|14196459 protocadherin gamma subfamily A, 1 isoform 2 precurs... 604 e-172
gi|14196451 protocadherin gamma subfamily A, 11 isoform 2 precur... 596 e-170
gi|11128039 protocadherin gamma subfamily A, 11 isoform 1 precur... 596 e-170
gi|11056065 protocadherin gamma subfamily A, 6 isoform 1 precurs... 592 e-169
gi|14196474 protocadherin gamma subfamily A, 6 isoform 2 precurs... 592 e-169
gi|14196468 protocadherin gamma subfamily A, 4 isoform 2 precurs... 588 e-168
gi|11056026 protocadherin gamma subfamily A, 4 isoform 1 precurs... 588 e-168
gi|11128041 protocadherin gamma subfamily A, 10 isoform 1 precur... 583 e-166
gi|14196448 protocadherin gamma subfamily A, 10 isoform 2 precur... 583 e-166
gi|14270502 protocadherin gamma subfamily B, 6 isoform 2 precurs... 582 e-166
gi|11128035 protocadherin gamma subfamily B, 2 isoform 1 precurs... 580 e-165
gi|11128029 protocadherin gamma subfamily B, 6 isoform 1 precurs... 580 e-165
gi|11056063 protocadherin gamma subfamily A, 7 isoform 1 precurs... 580 e-165
>gi|14195607 protocadherin beta 1 precursor [Homo sapiens]
Length = 818
Score = 1625 bits (4208), Expect = 0.0
Identities = 818/818 (100%), Positives = 818/818 (100%)
Query: 1 MAGTRRKSLQNRQVGSLLIFLCISVGDATTIRYSVAEEMESGSFVANVAKDLGLEVGKLA 60
MAGTRRKSLQNRQVGSLLIFLCISVGDATTIRYSVAEEMESGSFVANVAKDLGLEVGKLA
Sbjct: 1 MAGTRRKSLQNRQVGSLLIFLCISVGDATTIRYSVAEEMESGSFVANVAKDLGLEVGKLA 60
Query: 61 ARGARLVSEGNKMHFRLHRKTGDLFVKEKLDRESLCGKADPCVLHFEVVLVEPLQSFRAE 120
ARGARLVSEGNKMHFRLHRKTGDLFVKEKLDRESLCGKADPCVLHFEVVLVEPLQSFRAE
Sbjct: 61 ARGARLVSEGNKMHFRLHRKTGDLFVKEKLDRESLCGKADPCVLHFEVVLVEPLQSFRAE 120
Query: 121 VRVFDINDNAPVFLNKEPLLKIPESTPLGSRFPLQSAQDLDVGLNGLQNYTLSANGYFHL 180
VRVFDINDNAPVFLNKEPLLKIPESTPLGSRFPLQSAQDLDVGLNGLQNYTLSANGYFHL
Sbjct: 121 VRVFDINDNAPVFLNKEPLLKIPESTPLGSRFPLQSAQDLDVGLNGLQNYTLSANGYFHL 180
Query: 181 HTRFCSHGPKYAELVLNKPLDREEQPEVNLTITAVDGGSPPKSGTAHIHVVVLDVNDHVP 240
HTRFCSHGPKYAELVLNKPLDREEQPEVNLTITAVDGGSPPKSGTAHIHVVVLDVNDHVP
Sbjct: 181 HTRFCSHGPKYAELVLNKPLDREEQPEVNLTITAVDGGSPPKSGTAHIHVVVLDVNDHVP 240
Query: 241 QFSRLVYRAQVSENSPNGSLVATVTAVDLDEGTNKAITYSLAQNPEAILKTFQIDPQNGE 300
QFSRLVYRAQVSENSPNGSLVATVTAVDLDEGTNKAITYSLAQNPEAILKTFQIDPQNGE
Sbjct: 241 QFSRLVYRAQVSENSPNGSLVATVTAVDLDEGTNKAITYSLAQNPEAILKTFQIDPQNGE 300
Query: 301 VRLRGPLDFEAIETYDIDIQATDGGGLSAHSKVLVEVVDVNDNPPEVMVSSVSSPLPEDS 360
VRLRGPLDFEAIETYDIDIQATDGGGLSAHSKVLVEVVDVNDNPPEVMVSSVSSPLPEDS
Sbjct: 301 VRLRGPLDFEAIETYDIDIQATDGGGLSAHSKVLVEVVDVNDNPPEVMVSSVSSPLPEDS 360
Query: 361 PPQTVVALFTIRDRDIRVGGKVTCFLREDLPFVIKPTFGNSYSLVTDRSLDREEVSGYNI 420
PPQTVVALFTIRDRDIRVGGKVTCFLREDLPFVIKPTFGNSYSLVTDRSLDREEVSGYNI
Sbjct: 361 PPQTVVALFTIRDRDIRVGGKVTCFLREDLPFVIKPTFGNSYSLVTDRSLDREEVSGYNI 420
Query: 421 TIVAMDTGPPSLSAETMIEVLISDVNDNPPIFREDSYILTVRENNSPAVFIGKVHAEDLD 480
TIVAMDTGPPSLSAETMIEVLISDVNDNPPIFREDSYILTVRENNSPAVFIGKVHAEDLD
Sbjct: 421 TIVAMDTGPPSLSAETMIEVLISDVNDNPPIFREDSYILTVRENNSPAVFIGKVHAEDLD 480
Query: 481 LGENAQITYSLLPPKNGDLSVFAYISINSGNGKLYALRTMDYEAIQDFQFVVKATDGGFL 540
LGENAQITYSLLPPKNGDLSVFAYISINSGNGKLYALRTMDYEAIQDFQFVVKATDGGFL
Sbjct: 481 LGENAQITYSLLPPKNGDLSVFAYISINSGNGKLYALRTMDYEAIQDFQFVVKATDGGFL 540
Query: 541 SLSSQVTVRVVVLDDNDNRPMILYPLQNGTLPCNDLVPRSAEAGYLVTKVVAVDGDSGQN 600
SLSSQVTVRVVVLDDNDNRPMILYPLQNGTLPCNDLVPRSAEAGYLVTKVVAVDGDSGQN
Sbjct: 541 SLSSQVTVRVVVLDDNDNRPMILYPLQNGTLPCNDLVPRSAEAGYLVTKVVAVDGDSGQN 600
Query: 601 SWLSYHLLKATDLGLFSVQRQNGEIHTLRQISERDPMMQKLIILVQDHGQPALSTTVSLN 660
SWLSYHLLKATDLGLFSVQRQNGEIHTLRQISERDPMMQKLIILVQDHGQPALSTTVSLN
Sbjct: 601 SWLSYHLLKATDLGLFSVQRQNGEIHTLRQISERDPMMQKLIILVQDHGQPALSTTVSLN 660
Query: 661 ILLVDGFSEPYLQFQDPTKHSRKVNPSTKYLVISLVILSFLFLLSVIVIFIIHVYQKIKY 720
ILLVDGFSEPYLQFQDPTKHSRKVNPSTKYLVISLVILSFLFLLSVIVIFIIHVYQKIKY
Sbjct: 661 ILLVDGFSEPYLQFQDPTKHSRKVNPSTKYLVISLVILSFLFLLSVIVIFIIHVYQKIKY 720
Query: 721 REKFTIQEHFYDDCNFSNNLVQGQGNGSLSRPCPYEMCSATGTGNSEFRFLKRFMPNFPF 780
REKFTIQEHFYDDCNFSNNLVQGQGNGSLSRPCPYEMCSATGTGNSEFRFLKRFMPNFPF
Sbjct: 721 REKFTIQEHFYDDCNFSNNLVQGQGNGSLSRPCPYEMCSATGTGNSEFRFLKRFMPNFPF 780
Query: 781 PHATGEIKMEAGSSLPPNSDRNKSQRLEGHDQVSDDYM 818
PHATGEIKMEAGSSLPPNSDRNKSQRLEGHDQVSDDYM
Sbjct: 781 PHATGEIKMEAGSSLPPNSDRNKSQRLEGHDQVSDDYM 818
>gi|14195605 protocadherin beta 16 precursor [Homo sapiens]
Length = 776
Score = 797 bits (2058), Expect = 0.0
Identities = 400/769 (52%), Positives = 546/769 (71%), Gaps = 4/769 (0%)
Query: 10 QNRQVGSLLIFLCISVGDATTIRYSVAEEMESGSFVANVAKDLGLEVGKLAARGARLVSE 69
+ RQV + L +S A YSV EE E GSFVAN+ KDLGL + +++ R AR++S+
Sbjct: 10 RQRQVLVFFVLLSLSGAGAELGSYSVVEETERGSFVANLGKDLGLGLTEMSTRKARIISQ 69
Query: 70 GNKMHFRLHRKTGDLFVKEKLDRESLCGKADPCVLHFEVVLVEPLQSFRAEVRVFDINDN 129
GNK H +L +TGDL + EKLDRE LCG +PC+LHF+V++ PL+ F+AE+RV DIND+
Sbjct: 70 GNKQHLQLKAQTGDLLINEKLDREELCGPTEPCILHFQVLMENPLEIFQAELRVIDINDH 129
Query: 130 APVFLNKEPLLKIPESTPLGSRFPLQSAQDLDVGLNGLQNYTLSANGYFHLHTRFCSHGP 189
+P+F KE +LKIPE++PLG+ FPL A DLDVG N +QNY +S + +F + G
Sbjct: 130 SPMFTEKEMILKIPENSPLGTEFPLNHALDLDVGSNNVQNYKISPSSHFRVLIHEFRDGR 189
Query: 190 KYAELVLNKPLDREEQPEVNLTITAVDGGSPPKSGTAHIHVVVLDVNDHVPQFSRLVYRA 249
KY ELVL+K LDREE+P++ LT+TA+DGGSPP+SGTA + + V+D+ND+ P+F + +Y+
Sbjct: 190 KYPELVLDKELDREEEPQLRLTLTALDGGSPPRSGTAQVRIEVVDINDNAPEFEQPIYKV 249
Query: 250 QVSENSPNGSLVATVTAVDLDEGTNKAITYSLAQNPEAILKTFQIDPQNGEVRLRGPLDF 309
Q+ ENSP GSLVATV+A DLD G N I+Y+L Q E I KT +++P GEVRLR +DF
Sbjct: 250 QIPENSPLGSLVATVSARDLDGGANGKISYTLFQPSEDISKTLEVNPMTGEVRLRKQVDF 309
Query: 310 EAIETYDIDIQATDGGGLSAHSKVLVEVVDVNDNPPEVMVSSVSSPLPEDSPPQTVVALF 369
E + +Y++ I+ATDGGGLS +L++VVDVNDNPP+V +S+++SP+PE+S P+ VVA+F
Sbjct: 310 EMVTSYEVRIKATDGGGLSGKCTLLLQVVDVNDNPPQVTMSALTSPIPENS-PEIVVAVF 368
Query: 370 TIRDRDIRVGGKVTCFLREDLPFVIKPTFGNSYSLVTDRSLDREEVSGYNITIVAMDTGP 429
++ D D GK ++EDLPF++KP+ N Y+LVT+R+LDRE + YNIT+ D G
Sbjct: 369 SVSDPDSGNNGKTISSIQEDLPFLLKPSVKNFYTLVTERALDREARAEYNITLTVTDMGT 428
Query: 430 PSLSAETMIEVLISDVNDNPPIFREDSYILTVRENNSPAVFIGKVHAEDLDLGENAQITY 489
P L E I V ISDVNDN P F + SY L VRENNSPA+ IG V A D D G NAQ+TY
Sbjct: 429 PRLKTEHNITVQISDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTY 488
Query: 490 SLLPPKNGDLSVFAYISINSGNGKLYALRTMDYEAIQDFQFVVKATDGGFLSLSSQVTVR 549
SLLPP++ L + + +SIN+ NG L+ALR++DYEA+++F+F V ATD G +LSS+ VR
Sbjct: 489 SLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALREFEFRVSATDRGSPALSSEALVR 548
Query: 550 VVVLDDNDNRPMILYPLQNGTLPCNDLVPRSAEAGYLVTKVVAVDGDSGQNSWLSYHLLK 609
V+VLD NDN P +LYPLQNG+ PC +LVPR+AE GYLVTKVVAVDGDSGQN+WLSY LLK
Sbjct: 549 VLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK 608
Query: 610 ATDLGLFSVQRQNGEIHTLRQISERDPMMQKLIILVQDHGQPALSTTVSLNILLVDGFSE 669
AT+ GLF V NGE+ T R +SERD Q+L++LV+D+G+P S T +L++LLVDGFS+
Sbjct: 609 ATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHVLLVDGFSQ 668
Query: 670 PYLQFQDPTKHSRKVNPSTKYLVISLVILSFLFLLSVIVIFIIHVYQKIKYREKFTIQEH 729
P+L + + N T YLV++L +S LFL SV++ + + ++ + ++
Sbjct: 669 PFLPLPEAAPGQTQANSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSR---AASVGRC 725
Query: 730 FYDDCNFSNNLVQGQGNGSLSRPCPYEMCSATGTGNSEFRFLKRFMPNF 778
+ F LV G G+LS+ YE+C G+ SEF+FLK +PNF
Sbjct: 726 SMPEGPFPGRLVDVSGTGTLSQSYQYEVCLTGGSETSEFKFLKPIIPNF 774
>gi|9256614 protocadherin beta 3 precursor [Homo sapiens]
Length = 796
Score = 788 bits (2036), Expect = 0.0
Identities = 404/770 (52%), Positives = 548/770 (71%), Gaps = 4/770 (0%)
Query: 9 LQNRQVGSLLIFLCISVGDATTIRYSVAEEMESGSFVANVAKDLGLEVGKLAARGARLVS 68
L+ RQV L +FL S+ + + RYSVAEE E G +AN+AKDLGL V +LAARGA++VS
Sbjct: 9 LRQRQVLLLFVFLGGSLAGSESRRYSVAEEKEKGFLIANLAKDLGLRVEELAARGAQVVS 68
Query: 69 EGNKMHFRLHRKTGDLFVKEKLDRESLCGKADPCVLHFEVVLVEPLQSFRAEVRVFDIND 128
+GNK HF+L +TGDL + EKLDRE LCG +PC+LHF+++L PLQ E+R+ D+ND
Sbjct: 69 KGNKQHFQLSHQTGDLLLNEKLDREELCGPTEPCILHFQILLQNPLQFVTNELRIIDVND 128
Query: 129 NAPVFLNKEPLLKIPESTPLGSRFPLQSAQDLDVGLNGLQNYTLSANGYFHLHTRFCSHG 188
++PVF E LKI EST G+ PL +A+DLDVG N LQNYT++ N +FH+ TR G
Sbjct: 129 HSPVFFENEMHLKILESTLPGTVIPLGNAEDLDVGRNSLQNYTITPNSHFHVLTRSRRDG 188
Query: 189 PKYAELVLNKPLDREEQPEVNLTITAVDGGSPPKSGTAHIHVVVLDVNDHVPQFSRLVYR 248
KY ELVL+K LDREEQPE++LT+TA+DGGSPP+SGTA I++ VLD+ND+ P+F++ +Y
Sbjct: 189 RKYPELVLDKALDREEQPELSLTLTALDGGSPPRSGTAQINIQVLDINDNAPEFAQPLYE 248
Query: 249 AQVSENSPNGSLVATVTAVDLDEGTNKAITYSLAQNPEAILKTFQIDPQNGEVRLRGPLD 308
V EN+P S++ TV+A DLD G+ I+Y+ E I KTFQ++P G+++L L+
Sbjct: 249 VAVLENTPVNSVIVTVSASDLDTGSFGTISYAFFHASEEIRKTFQLNPITGDMQLVKYLN 308
Query: 309 FEAIETYDIDIQATDGGGLSAHSKVLVEVVDVNDNPPEVMVSSVSSPLPEDSPPQTVVAL 368
FEAI +Y++DI+A DGGGLS S V+V+VVDVNDNPPE+ +SSV+SP+PE+S +TV+A+
Sbjct: 309 FEAINSYEVDIEAKDGGGLSGKSTVIVQVVDVNDNPPELTLSSVNSPIPENS-GETVLAV 367
Query: 369 FTIRDRDIRVGGKVTCFLREDLPFVIKPTFGNSYSLVTDRSLDREEVSGYNITIVAMDTG 428
F++ D D G+V C + +LPF +KP+ N Y+LV++ +LDRE S YNITI D G
Sbjct: 368 FSVSDLDSGDNGRVMCSIENNLPFFLKPSVENFYTLVSEGALDRETRSEYNITITITDLG 427
Query: 429 PPSLSAETMIEVLISDVNDNPPIFREDSYILTVRENNSPAVFIGKVHAEDLDLGENAQIT 488
P L + I VL+SDVNDN P F + SY L VRENNSPA+ IG V A D D G NAQ+T
Sbjct: 428 TPRLKTKYNITVLVSDVNDNAPAFTQISYTLFVRENNSPALHIGSVSATDRDSGTNAQVT 487
Query: 489 YSLLPPKNGDLSVFAYISINSGNGKLYALRTMDYEAIQDFQFVVKATDGGFLSLSSQVTV 548
YSLLPP++ L + + +SIN+ NG L+ALR++DYEA+Q F+F V ATD G +LSS+ V
Sbjct: 488 YSLLPPQDPHLPLSSLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSSEALV 547
Query: 549 RVVVLDDNDNRPMILYPLQNGTLPCNDLVPRSAEAGYLVTKVVAVDGDSGQNSWLSYHLL 608
RV+VLD NDN P +LYPLQNG+ PC +LVPR+AE GYLVTKVVAVDGDSGQN+WLSY LL
Sbjct: 548 RVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLL 607
Query: 609 KATDLGLFSVQRQNGEIHTLRQISERDPMMQKLIILVQDHGQPALSTTVSLNILLVDGFS 668
KAT+ GLF V NGE+ T R +SERD +L++LV+D+G+P S T +L++LLVDGFS
Sbjct: 608 KATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFS 667
Query: 669 EPYLQFQDPTKHSRKVNPSTKYLVISLVILSFLFLLSVIVIFIIHVYQKIKYREKFTIQE 728
+PYL + + + T YLV++L +S LFL SV++ + + ++ + ++
Sbjct: 668 QPYLPLPEAAPAQAQADLLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSR---AASVGR 724
Query: 729 HFYDDCNFSNNLVQGQGNGSLSRPCPYEMCSATGTGNSEFRFLKRFMPNF 778
+ F +V G G+LS+ YE+C G+G +EF+FLK +PNF
Sbjct: 725 CSVPEGPFPGQMVDVSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNF 774
>gi|9256612 protocadherin beta 2 precursor [Homo sapiens]
Length = 798
Score = 788 bits (2036), Expect = 0.0
Identities = 403/769 (52%), Positives = 546/769 (71%), Gaps = 4/769 (0%)
Query: 10 QNRQVGSLLIFLCISVGDATTIRYSVAEEMESGSFVANVAKDLGLEVGKLAARGARLVSE 69
+ RQV + L I+ YSVAEE ESGSFVAN+ KDLGLE+G+LA RGAR+VS+
Sbjct: 12 KQRQVLIFFVLLGIAQASCQPRHYSVAEETESGSFVANLLKDLGLEIGELAVRGARVVSK 71
Query: 70 GNKMHFRLHRKTGDLFVKEKLDRESLCGKADPCVLHFEVVLVEPLQSFRAEVRVFDINDN 129
G KMH + R+TGDL + EKLDRE LCG +PCVL F+V+L PLQ F+AE+R+ D+ND+
Sbjct: 72 GKKMHLQFDRQTGDLLLNEKLDREELCGPTEPCVLPFQVLLENPLQFFQAELRIRDVNDH 131
Query: 130 APVFLNKEPLLKIPESTPLGSRFPLQSAQDLDVGLNGLQNYTLSANGYFHLHTRFCSHGP 189
+PVFL+KE LLKIPES G+ F ++ AQDLDVG N LQNYT+S N +FHL+ + G
Sbjct: 132 SPVFLDKEILLKIPESITPGTTFLIERAQDLDVGTNSLQNYTISPNFHFHLNLQDSLDGI 191
Query: 190 KYAELVLNKPLDREEQPEVNLTITAVDGGSPPKSGTAHIHVVVLDVNDHVPQFSRLVYRA 249
+LVLN+ LDREEQPE+ LT+TA+DGGSPP+SGTA + + V+D+ND+VP+F++L+Y
Sbjct: 192 ILPQLVLNRALDREEQPEIRLTLTALDGGSPPRSGTALVRIEVVDINDNVPEFAKLLYEV 251
Query: 250 QVSENSPNGSLVATVTAVDLDEGTNKAITYSLAQNPEAILKTFQIDPQNGEVRLRGPLDF 309
Q+ E+SP GS VA V+A DLD GTN I+Y+ +Q E I KTF++ ++GE+ LR LDF
Sbjct: 252 QIPEDSPVGSQVAIVSARDLDIGTNGEISYAFSQASEDIRKTFRLSAKSGELLLRQKLDF 311
Query: 310 EAIETYDIDIQATDGGGLSAHSKVLVEVVDVNDNPPEVMVSSVSSPLPEDSPPQTVVALF 369
E+I+TY ++IQATDGGGLS V V+V+D+NDNPPE+ +S++ + +PE+ T++A+F
Sbjct: 312 ESIQTYTVNIQATDGGGLSGTCVVFVQVMDLNDNPPELTMSTLINQIPENL-QDTLIAVF 370
Query: 370 TIRDRDIRVGGKVTCFLREDLPFVIKPTFGNSYSLVTDRSLDREEVSGYNITIVAMDTGP 429
++ D D G++ C +++DLPF +KP+ N Y+LV +LDRE S YNITI D G
Sbjct: 371 SVSDPDSGDNGRMVCSIQDDLPFFLKPSVENFYTLVISTALDRETRSEYNITITVTDFGT 430
Query: 430 PSLSAETMIEVLISDVNDNPPIFREDSYILTVRENNSPAVFIGKVHAEDLDLGENAQITY 489
P L E I VL+SDVNDN P F + SY L VRENNSPA+ IG V A D D G NAQ+TY
Sbjct: 431 PRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTY 490
Query: 490 SLLPPKNGDLSVFAYISINSGNGKLYALRTMDYEAIQDFQFVVKATDGGFLSLSSQVTVR 549
SLLPP++ L + + +SIN+ NG L+AL+++DYEA+Q F+F V A D G +LSS+ VR
Sbjct: 491 SLLPPQDPHLPLASLVSINADNGHLFALQSLDYEALQAFEFRVGAADRGSPALSSEALVR 550
Query: 550 VVVLDDNDNRPMILYPLQNGTLPCNDLVPRSAEAGYLVTKVVAVDGDSGQNSWLSYHLLK 609
V+VLD NDN P +LYPLQNG+ PC +LVPR+AE GYLVTKVVAVDGDSGQN+WLSY LLK
Sbjct: 551 VLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK 610
Query: 610 ATDLGLFSVQRQNGEIHTLRQISERDPMMQKLIILVQDHGQPALSTTVSLNILLVDGFSE 669
AT+ GLF V NGE+ T R + ERD Q+L++LV+D+G+P S T +L++LLVDGFS+
Sbjct: 611 ATEPGLFGVWAHNGEVRTARLLRERDAAKQRLVVLVKDNGEPPRSATATLHVLLVDGFSQ 670
Query: 670 PYLQFQDPTKHSRKVNPSTKYLVISLVILSFLFLLSVIVIFIIHVYQKIKYREKFTIQEH 729
PYL + + + T YLV++L +S LFL SV++ + + ++ + ++
Sbjct: 671 PYLLLPEAAPAQAQADLLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSR---AASVGRC 727
Query: 730 FYDDCNFSNNLVQGQGNGSLSRPCPYEMCSATGTGNSEFRFLKRFMPNF 778
+ F +V G G+LS+ YE+C G+G +EF+FLK +PNF
Sbjct: 728 SVPEGPFPGQMVDVSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNF 776
>gi|11036656 protocadherin beta 7 precursor [Homo sapiens]
Length = 793
Score = 787 bits (2033), Expect = 0.0
Identities = 413/779 (53%), Positives = 547/779 (70%), Gaps = 7/779 (0%)
Query: 7 KSLQNRQVGSLLIFLCISVGDATTIRYSVAEEMESGSFVANVAKDLGLEVGKLAARGARL 66
+++Q RQV L +FL +S A +RY VAEE E G+F+ N+AKDLGL VG+L ARG R+
Sbjct: 7 RAVQKRQVLFLCVFLGMSWAGAEPLRYFVAEETERGTFLTNLAKDLGLGVGELRARGTRI 66
Query: 67 VSEGNKMHFRLHRKTGDLFVKEKLDRESLCGKADPCVLHFEVVLVEPLQSFRAEVRVFDI 126
VS+ N L TGDL + EKLDRE LCG +PCVL F+++L +P Q FRAE+ V DI
Sbjct: 67 VSDQNMQILLLSSLTGDLLLNEKLDREELCGPREPCVLPFQLLLEKPFQIFRAELWVRDI 126
Query: 127 NDNAPVFLNKEPLLKIPESTPLGSRFPLQSAQDLDVGLNGLQNYTLSANGYFHLHTRFCS 186
ND+APVFL++E LKI EST G+ F L+SAQD DVG N L NYT+S N YFH++
Sbjct: 127 NDHAPVFLDREISLKILESTTPGAAFLLESAQDSDVGTNSLSNYTISPNAYFHINVHDSG 186
Query: 187 HGPKYAELVLNKPLDREEQPEVNLTITAVDGGSPPKSGTAHIHVVVLDVNDHVPQFSRLV 246
G Y ELVLN+ LDREE PE +LT+TA+DGGSPP+SGTA + ++VLDVND+ P F R +
Sbjct: 187 EGNIYPELVLNQVLDREEIPEFSLTLTALDGGSPPRSGTALVRILVLDVNDNAPDFVRSL 246
Query: 247 YRAQVSENSPNGSLVATVTAVDLDEGTNKAITYSLAQNPEAILKTFQIDPQNGEVRLRGP 306
Y+ QV ENSP GS+V +V+A DLD G+N I Y+ + E ILKTFQI+P +G + L+
Sbjct: 247 YKVQVPENSPVGSMVVSVSARDLDTGSNGEIAYAFSYATERILKTFQINPTSGSLHLKAQ 306
Query: 307 LDFEAIETYDIDIQATDGGGLSAHSKVLVEVVDVNDNPPEVMVSSVSSPLPEDSPPQTVV 366
LD+EAI+TY + IQA DGGGLS V+V+V D+NDN PE+++SS++SP+ E+S P+TVV
Sbjct: 307 LDYEAIQTYTLTIQAKDGGGLSGKCTVVVDVTDINDNRPELLLSSLTSPIAENS-PETVV 365
Query: 367 ALFTIRDRDIRVGGKVTCFLREDLPFVIKPTFGNSYSLVTDRSLDREEVSGYNITIVAMD 426
A+F IRDRD GK C +++D+PF++KP+ N Y+LVT++ LDRE + YNITI D
Sbjct: 366 AVFRIRDRDSGNNGKTVCSIQDDVPFILKPSVENFYTLVTEKPLDRERNTEYNITITVTD 425
Query: 427 TGPPSLSAETMIEVLISDVNDNPPIFREDSYILTVRENNSPAVFIGKVHAEDLDLGENAQ 486
G P L E I VL+SDVNDN P F + SY L VRENNSPA+ IG V A D D G NAQ
Sbjct: 426 LGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALPIGSVSATDRDSGTNAQ 485
Query: 487 ITYSLLPPKNGDLSVFAYISINSGNGKLYALRTMDYEAIQDFQFVVKATDGGFLSLSSQV 546
+ YSLLP ++ L + + +SIN+ NG L+ALR++DYEA+Q F+F V ATD G +LSS+
Sbjct: 486 VIYSLLPSQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSSEA 545
Query: 547 TVRVVVLDDNDNRPMILYPLQNGTLPCNDLVPRSAEAGYLVTKVVAVDGDSGQNSWLSYH 606
VRV+VLD NDN P +LYPLQN + PC + +PR+AE GYLVTKVVAVDGDSGQN+WLSY
Sbjct: 546 LVRVLVLDANDNSPFVLYPLQNSSAPCTEPLPRAAEPGYLVTKVVAVDGDSGQNAWLSYQ 605
Query: 607 LLKATDLGLFSVQRQNGEIHTLRQISERDPMMQKLIILVQDHGQPALSTTVSLNILLVDG 666
LLKAT+ GLF V NGE+ T R +SERD Q+L++LV+D+G+P S T +L++LLVDG
Sbjct: 606 LLKATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHVLLVDG 665
Query: 667 FSEPYLQFQDPTKHSRKVNPSTKYLVISLVILSFLFLLSVIVIFIIHVYQKIKYREKFTI 726
FS+PYL+ P + N T YLV++L +S LFLLSV++ + + ++ + +
Sbjct: 666 FSQPYLRL--PEAAPDQANSLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSR---AAPV 720
Query: 727 QEHFYDDCNFSNNLVQGQGNGSLSRPCPYEMCSATGTGNSEFRFLKRFMPNFPFPHATG 785
+ F +LV G G+LS+ YE+C G+G +EF+FLK +PN P +TG
Sbjct: 721 GRCSVPEGPFPRHLVDLSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNL-LPQSTG 778
>gi|9256610 protocadherin beta 15 precursor [Homo sapiens]
Length = 787
Score = 785 bits (2028), Expect = 0.0
Identities = 406/768 (52%), Positives = 540/768 (70%), Gaps = 4/768 (0%)
Query: 10 QNRQVGSLLIFLCISVGDATTIRYSVAEEMESGSFVANVAKDLGLEVGKLAARGARLVSE 69
+ RQV LL+ L +++ RYSV EE E GSFVAN+A DLGL VG+LA RGAR+VSE
Sbjct: 10 EQRQVLILLLLLEVTLAGWEPRRYSVMEETERGSFVANLANDLGLGVGELAERGARVVSE 69
Query: 70 GNKMHFRLHRKTGDLFVKEKLDRESLCGKADPCVLHFEVVLVEPLQSFRAEVRVFDINDN 129
N+ +L +TG L + EKLDRE LCG +PC++HF+V+L +PL+ FRAE+ V DIND+
Sbjct: 70 DNEQGLQLDLQTGQLILNEKLDREKLCGPTEPCIMHFQVLLKKPLEVFRAELLVTDINDH 129
Query: 130 APVFLNKEPLLKIPESTPLGSRFPLQSAQDLDVGLNGLQNYTLSANGYFHLHTRFCSHGP 189
+P F +E LKIPE++ LG+ FPL+ A+DLDVG N +QNY +S N +FH+ TR G
Sbjct: 130 SPEFPEREMTLKIPETSSLGTVFPLKKARDLDVGSNNVQNYNISPNSHFHVSTRTRGDGR 189
Query: 190 KYAELVLNKPLDREEQPEVNLTITAVDGGSPPKSGTAHIHVVVLDVNDHVPQFSRLVYRA 249
KY ELVL+ LDREEQ E+ LT+TAVDGGSPP+SGT I ++VLD ND+ P+F + +Y
Sbjct: 190 KYPELVLDTELDREEQAELRLTLTAVDGGSPPRSGTVQILILVLDANDNAPEFVQALYEV 249
Query: 250 QVSENSPNGSLVATVTAVDLDEGTNKAITYSLAQNPEAILKTFQIDPQNGEVRLRGPLDF 309
QV ENSP GSLV V+A DLD GTN I+YSL + + I K F++ +GE+RL LDF
Sbjct: 250 QVPENSPVGSLVVKVSARDLDTGTNGEISYSLYYSSQEIDKPFELSSLSGEIRLIKKLDF 309
Query: 310 EAIETYDIDIQATDGGGLSAHSKVLVEVVDVNDNPPEVMVSSVSSPLPEDSPPQTVVALF 369
E + +YD+DI+A+DGGGLS V V+V+DVNDN PE+ +SS++SP+PE+SP +T VALF
Sbjct: 310 ETMSSYDLDIEASDGGGLSGKCSVSVKVLDVNDNFPELSISSLTSPIPENSP-ETEVALF 368
Query: 370 TIRDRDIRVGGKVTCFLREDLPFVIKPTFGNSYSLVTDRSLDREEVSGYNITIVAMDTGP 429
IRDRD GK+ C +++D+PF +KP+ N Y LVT+ +LDRE + YNITI D G
Sbjct: 369 RIRDRDSGENGKMICSIQDDVPFKLKPSVENFYRLVTEGALDRETRAEYNITITITDLGT 428
Query: 430 PSLSAETMIEVLISDVNDNPPIFREDSYILTVRENNSPAVFIGKVHAEDLDLGENAQITY 489
P L E I VL+SDVNDN P F + SY L VRENNSPA+ IG V A D D G NAQ+TY
Sbjct: 429 PRLKTEQSITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTY 488
Query: 490 SLLPPKNGDLSVFAYISINSGNGKLYALRTMDYEAIQDFQFVVKATDGGFLSLSSQVTVR 549
SLLPP++ L + + +SIN+ NG L+AL+++DYEA+Q F+F V ATD GF +LSS+ VR
Sbjct: 489 SLLPPRDPHLPLTSLVSINTDNGHLFALQSLDYEALQAFEFRVGATDRGFPALSSEALVR 548
Query: 550 VVVLDDNDNRPMILYPLQNGTLPCNDLVPRSAEAGYLVTKVVAVDGDSGQNSWLSYHLLK 609
V+VLD NDN P +LYPLQNG+ PC +LVPR+AE GYLVTKVVAVDGDSGQN+WLSY LLK
Sbjct: 549 VLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK 608
Query: 610 ATDLGLFSVQRQNGEIHTLRQISERDPMMQKLIILVQDHGQPALSTTVSLNILLVDGFSE 669
AT+ GLF V NGE+ T R +SERD +L++LV+D+G+P S T +L +LLVDGFS+
Sbjct: 609 ATEPGLFGVWAHNGEVRTARLLSERDVAKHRLVVLVKDNGEPPRSATATLQVLLVDGFSQ 668
Query: 670 PYLQFQDPTKHSRKVNPSTKYLVISLVILSFLFLLSVIVIFIIHVYQKIKYREKFTIQEH 729
PYL + + + T YLV++L +S LFL SV + + + ++ + ++
Sbjct: 669 PYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVFLFVAVRLCRRSR---AASVGRC 725
Query: 730 FYDDCNFSNNLVQGQGNGSLSRPCPYEMCSATGTGNSEFRFLKRFMPN 777
+ F +LV G G+LS+ YE+C G+ +++F+FLK PN
Sbjct: 726 SVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSESNDFKFLKPIFPN 773
>gi|11036654 protocadherin beta 13 precursor [Homo sapiens]
Length = 798
Score = 781 bits (2018), Expect = 0.0
Identities = 403/790 (51%), Positives = 557/790 (70%), Gaps = 8/790 (1%)
Query: 10 QNRQVGSLLIFLCISVGDATTIR-YSVAEEMESGSFVANVAKDLGLEVGKLAARGARLVS 68
+ RQV + L +S+ A R YSV EE E SFV N+AKDLGLE + + RG R+VS
Sbjct: 10 RQRQVLFSFLLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREFSRRGVRVVS 69
Query: 69 EGNKMHFRLHRKTGDLFVKEKLDRESLCGKADPCVLHFEVVLVEPLQSFRAEVRVFDIND 128
GNK+H +L+++T DL + EKLDRE LCG +PCVL F+V+L P + F+AE++V DIND
Sbjct: 70 RGNKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQAELQVIDIND 129
Query: 129 NAPVFLNKEPLLKIPESTPLGSRFPLQSAQDLDVGLNGLQNYTLSANGYFHLHTRFCSHG 188
++PVFL+K+ L+K+ ES+P G+ FPL++A+DLDVG N ++NY +S N YF + TR S G
Sbjct: 130 HSPVFLDKQMLVKVSESSPPGTTFPLKNAEDLDVGQNNIENYIISPNSYFRVLTRKRSDG 189
Query: 189 PKYAELVLNKPLDREEQPEVNLTITAVDGGSPPKSGTAHIHVVVLDVNDHVPQFSRLVYR 248
KY ELVL+K LDREE+ E+ LT+TA+DGGSPP+SGTA +++ VLDVND+ P+F + YR
Sbjct: 190 RKYPELVLDKALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVLDVNDNAPEFEQPFYR 249
Query: 249 AQVSENSPNGSLVATVTAVDLDEGTNKAITYSLAQNPEAILKTFQIDPQNGEVRLRGPLD 308
Q+SE+SP G LV V+A D+D G N I+YSL Q E I KTF+I+P GE+ L+ LD
Sbjct: 250 VQISEDSPVGFLVVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTGEIELKKQLD 309
Query: 309 FEAIETYDIDIQATDGGGLSAHSKVLVEVVDVNDNPPEVMVSSVSSPLPEDSPPQTVVAL 368
FE +++Y+++I+A D G S VL++V+DVND+ PEV +S+ +SP+PE++ P+TVVAL
Sbjct: 310 FEKLQSYEVNIEARDAGTFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENA-PETVVAL 368
Query: 369 FTIRDRDIRVGGKVTCFLREDLPFVIKPTFGNSYSLVTDRSLDREEVSGYNITIVAMDTG 428
F++ D D GK++C ++EDLPF++K + N Y+L+T+R LDRE + YNITI D G
Sbjct: 369 FSVSDLDSGENGKISCSIQEDLPFLLK-SAENFYTLLTERPLDRESRAEYNITITVTDLG 427
Query: 429 PPSLSAETMIEVLISDVNDNPPIFREDSYILTVRENNSPAVFIGKVHAEDLDLGENAQIT 488
P L + + VLI+DVNDN P F + SY L VRENNSPA+ I V A D D G NAQ+T
Sbjct: 428 TPMLITQLNMTVLIADVNDNAPAFTQTSYTLFVRENNSPALHIRSVSATDRDSGTNAQVT 487
Query: 489 YSLLPPKNGDLSVFAYISINSGNGKLYALRTMDYEAIQDFQFVVKATDGGFLSLSSQVTV 548
YSLLPP++ L + + +SIN+ NG L+ALR++DYEA+Q FQF V A+D G +LSS+ V
Sbjct: 488 YSLLPPQDPHLPLTSLVSINADNGHLFALRSLDYEALQGFQFRVGASDHGSPALSSEALV 547
Query: 549 RVVVLDDNDNRPMILYPLQNGTLPCNDLVPRSAEAGYLVTKVVAVDGDSGQNSWLSYHLL 608
RVVVLD NDN P +LYPLQNG+ PC +LVPR+AE GYLVTKVVAVDGDSGQN+WLSY LL
Sbjct: 548 RVVVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLL 607
Query: 609 KATDLGLFSVQRQNGEIHTLRQISERDPMMQKLIILVQDHGQPALSTTVSLNILLVDGFS 668
KAT+LGLF V NGE+ T R +SERD +L++LV+D+G+P S T +L++LLVDGFS
Sbjct: 608 KATELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFS 667
Query: 669 EPYLQFQDPTKHSRKVNPSTKYLVISLVILSFLFLLSVIVIFIIHVYQKIKYREKFTIQE 728
+PYL + + + T YLV++L +S LFL SV++ + + ++ + ++
Sbjct: 668 QPYLPLPEAAPTQAQADLLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSR---AASVGR 724
Query: 729 HFYDDCNFSNNLVQGQGNGSLSRPCPYEMCSATGTGNSEFRFLKRFMPNFPFPHATGEIK 788
+ +LV G +LS+ YE+C A G+G +EF+FLK +PNFP P G+ +
Sbjct: 725 CLVPEGPLPGHLVDMSGTRTLSQSYQYEVCLAGGSGTNEFKFLKPIIPNFP-PQCPGK-E 782
Query: 789 MEAGSSLPPN 798
++ S+ P N
Sbjct: 783 IQGNSTFPNN 792
>gi|11276081 protocadherin beta 8 precursor [Homo sapiens]
Length = 801
Score = 779 bits (2012), Expect = 0.0
Identities = 398/798 (49%), Positives = 555/798 (69%), Gaps = 17/798 (2%)
Query: 10 QNRQVGSLLIFLCISVGDATTIR-YSVAEEMESGSFVANVAKDLGLEVGKLAARGARLVS 68
+ RQV + L +S+ A R YSV EE E SFV N+AKDLGLE + + RG R+VS
Sbjct: 10 RQRQVLFSFLLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREFSRRGVRVVS 69
Query: 69 EGNKMHFRLHRKTGDLFVKEKLDRESLCGKADPCVLHFEVVLVEPLQSFRAEVRVFDIND 128
GNK+H +L+++T DL + EKLDRE LCG +PCVL F+V+L P + F+AE++V DIND
Sbjct: 70 RGNKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQAELQVIDIND 129
Query: 129 NAPVFLNKEPLLKIPESTPLGSRFPLQSAQDLDVGLNGLQNYTLSANGYFHLHTRFCSHG 188
++PVFL+K+ L+K+ ES+P G+ FPL++A+DLD+G N ++NY +S N YF + TR S G
Sbjct: 130 HSPVFLDKQMLVKVSESSPPGTAFPLKNAEDLDIGQNNIENYIISPNSYFRVLTRKRSDG 189
Query: 189 PKYAELVLNKPLDREEQPEVNLTITAVDGGSPPKSGTAHIHVVVLDVNDHVPQFSRLVYR 248
KY ELVL+ LDREE+ E+ LT+TA+DGGSPP+SGTA +++ V+DVND+ P+F + YR
Sbjct: 190 RKYPELVLDNALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVVDVNDNAPEFQQPFYR 249
Query: 249 AQVSENSPNGSLVATVTAVDLDEGTNKAITYSLAQNPEAILKTFQIDPQNGEVRLRGPLD 308
Q+SE+SP LV V+A D+D G N I+YSL Q + I KTF++D GE+RL+ LD
Sbjct: 250 VQISEDSPISFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDFLTGEIRLKKQLD 309
Query: 309 FEAIETYDIDIQATDGGGLSAHSKVLVEVVDVNDNPPEVMVSSVSSPLPEDSPPQTVVAL 368
FE ++Y+++I+A D GG S VL++V+DVND+ PEV +S+ +SP+PE++P +TVVAL
Sbjct: 310 FEKFQSYEVNIEARDAGGFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENAP-ETVVAL 368
Query: 369 FTIRDRDIRVGGKVTCFLREDLPFVIKPTFGNSYSLVTDRSLDREEVSGYNITIVAMDTG 428
F++ D D GK++C ++EDLPF++K + GN Y+L+T+ LDRE + YN+TI D G
Sbjct: 369 FSVSDLDSGENGKISCSIQEDLPFLLKSSVGNFYTLLTETPLDRESRAEYNVTITVTDLG 428
Query: 429 PPSLSAETMIEVLISDVNDNPPIFREDSYILTVRENNSPAVFIGKVHAEDLDLGENAQIT 488
P L+ + VL+SDVNDN P F + SY L VRENNSPA+ IG V A D D G NAQ+T
Sbjct: 429 TPRLTTHLNMTVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVT 488
Query: 489 YSLLPPKNGDLSVFAYISINSGNGKLYALRTMDYEAIQDFQFVVKATDGGFLSLSSQVTV 548
YSLLPP++ L + + +SIN+ NG L+ALR++DYEA+Q F+F V A+D G +LSS+ V
Sbjct: 489 YSLLPPQDPHLPLASLVSINTDNGHLFALRSLDYEALQAFEFRVGASDRGSPALSSEALV 548
Query: 549 RVVVLDDNDNRPMILYPLQNGTLPCNDLVPRSAEAGYLVTKVVAVDGDSGQNSWLSYHLL 608
RV+VLD NDN P +LYPLQNG+ PC +LVPR+AE GYLVTKVVAVDGDSGQN+WLSY LL
Sbjct: 549 RVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLL 608
Query: 609 KATDLGLFSVQRQNGEIHTLRQISERDPMMQKLIILVQDHGQPALSTTVSLNILLVDGFS 668
KAT+ GLF V NGE+ T R +SERD Q+L++LV+D+G+P S T +L++LLVDGFS
Sbjct: 609 KATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPCSATATLHLLLVDGFS 668
Query: 669 EPYLQFQDPTKHSRKVNPSTKYLVISLVILSFLFLLSVIVIFIIHVYQKIKYREKFTIQE 728
+PYL + + + T YLV++L +S LFL SV++ + + ++ + ++
Sbjct: 669 QPYLPLPEAAPAQGQADSLTVYLVVALASVSSLFLFSVLLFVAVLLCRRSR---AASVGR 725
Query: 729 HFYDDCNFSNNLVQGQGNGSLSRPCPYEMCSATGTGNSEFRFLKRFMPNFPFPHATGEIK 788
+ F +LV +G GSLS+ YE+C A G+G +EF+FLK +PN
Sbjct: 726 CSVPEGPFPGHLVDVRGTGSLSQNYQYEVCLAGGSGTNEFQFLKPVLPNI---------- 775
Query: 789 MEAGSSLPPNSDRNKSQR 806
G S P ++N + R
Sbjct: 776 --QGHSFGPEMEQNSNFR 791
>gi|9256616 protocadherin beta 4 precursor [Homo sapiens]
Length = 795
Score = 779 bits (2011), Expect = 0.0
Identities = 396/778 (50%), Positives = 543/778 (69%), Gaps = 4/778 (0%)
Query: 11 NRQVGSLLIFLCISVGDATTIRYSVAEEMESGSFVANVAKDLGLEVGKLAARGARLVSEG 70
NRQV + ++ + +S IRYSV EE ESGSFVA++AKDLGL +G+LA+R AR++S+
Sbjct: 10 NRQVLAFILMVFLSQVRLEPIRYSVLEETESGSFVAHLAKDLGLGIGELASRSARVLSDD 69
Query: 71 NKMHFRLHRKTGDLFVKEKLDRESLCGKADPCVLHFEVVLVEPLQSFRAEVRVFDINDNA 130
+K +L R+TGDL ++EKLDRE LCG +PCVLHF+V L P+Q F+ E+ + DIND++
Sbjct: 70 DKQRLQLDRQTGDLLLREKLDREELCGPIEPCVLHFQVFLEMPVQFFQGELLIQDINDHS 129
Query: 131 PVFLNKEPLLKIPESTPLGSRFPLQSAQDLDVGLNGLQNYTLSANGYFHLHTRFCSHGPK 190
P+F +E LLKI E++ G+ FPL A+DLDVG NGLQ YT+S N +FH+ TR S G K
Sbjct: 130 PIFPEREVLLKILENSQPGTLFPLLIAEDLDVGSNGLQKYTISPNSHFHILTRNHSEGKK 189
Query: 191 YAELVLNKPLDREEQPEVNLTITAVDGGSPPKSGTAHIHVVVLDVNDHVPQFSRLVYRAQ 250
Y +LV +KPLDREEQPE +LT+ A+DGGSPP+SGT + ++++D+ND+ P+F Y Q
Sbjct: 190 YPDLVQDKPLDREEQPEFSLTLVALDGGSPPRSGTVMVRILIMDINDNAPEFVHTPYGVQ 249
Query: 251 VSENSPNGSLVATVTAVDLDEGTNKAITYSLAQNPEAILKTFQIDPQNGEVRLRGPLDFE 310
V ENSP S + V A D+D G +++Y L Q + I +TF I+ GE+ L+ LDFE
Sbjct: 250 VLENSPLDSPIVRVLARDIDAGNFGSVSYGLFQASDEIKQTFSINEVTGEILLKKKLDFE 309
Query: 311 AIETYDIDIQATDGGGLSAHSKVLVEVVDVNDNPPEVMVSSVSSPLPEDSPPQTVVALFT 370
I++Y ++I+ATDGGGLS V++EVVDVNDNPPE+++SS++S +PE++P +TVV++F
Sbjct: 310 KIKSYHVEIEATDGGGLSGKGTVVIEVVDVNDNPPELIISSLTSSIPENAP-ETVVSIFR 368
Query: 371 IRDRDIRVGGKVTCFLREDLPFVIKPTFGNSYSLVTDRSLDREEVSGYNITIVAMDTGPP 430
IRDRD GK+ C + ++LPF++KPT N Y+LVT+R LDRE + YNITI D G P
Sbjct: 369 IRDRDSGENGKMICSIPDNLPFILKPTLKNFYTLVTERPLDRETSAEYNITIAVTDLGTP 428
Query: 431 SLSAETMIEVLISDVNDNPPIFREDSYILTVRENNSPAVFIGKVHAEDLDLGENAQITYS 490
L + I V +SDVNDN P F + SY L VRENNSPA+ IG V A D D G NAQ+TYS
Sbjct: 429 RLKTQQNITVQVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYS 488
Query: 491 LLPPKNGDLSVFAYISINSGNGKLYALRTMDYEAIQDFQFVVKATDGGFLSLSSQVTVRV 550
LLPP++ L + + +SIN+ NG L+ALR++DYEA+Q F+F V A+D G +LSS+ VRV
Sbjct: 489 LLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGASDRGSPALSSEALVRV 548
Query: 551 VVLDDNDNRPMILYPLQNGTLPCNDLVPRSAEAGYLVTKVVAVDGDSGQNSWLSYHLLKA 610
+VLD NDN P +LYPLQNG+ PC +LVPR+AE GYLVTKVVAVDGDSGQN+WLSY LLKA
Sbjct: 549 LVLDTNDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA 608
Query: 611 TDLGLFSVQRQNGEIHTLRQISERDPMMQKLIILVQDHGQPALSTTVSLNILLVDGFSEP 670
T+ GLF V NGE+ T R +SERD +L++LV+D+G+P S T +L++LLVDGFS+P
Sbjct: 609 TEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQP 668
Query: 671 YLQFQDPTKHSRKVNPSTKYLVISLVILSFLFLLSVIVIFIIHVYQKIKYREKFTIQEHF 730
YL + + + T YLV++L +S LFL SV++ + + ++ + ++
Sbjct: 669 YLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSR---AASVGRCS 725
Query: 731 YDDCNFSNNLVQGQGNGSLSRPCPYEMCSATGTGNSEFRFLKRFMPNFPFPHATGEIK 788
+ F +LV G G+LS+ YE+C +G EF+FLK PN E+K
Sbjct: 726 VPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGDSGTGEFKFLKPIFPNLLVQDTGREVK 783
>gi|9256608 protocadherin beta 14 precursor [Homo sapiens]
Length = 798
Score = 778 bits (2008), Expect = 0.0
Identities = 402/777 (51%), Positives = 546/777 (70%), Gaps = 5/777 (0%)
Query: 9 LQNRQVGSLLIFLCISVGDATTIRYSVAEEMESGSFVANVAKDLGLEVGKLAARGARLVS 68
L+ RQV L+ L +S + YSVAEE E GSFVAN+A+DLGL V +L++R AR+VS
Sbjct: 9 LRKRQVLIFLVLLGLSRAGTESAHYSVAEETEIGSFVANLARDLGLGVEELSSREARVVS 68
Query: 69 EGNKMHFRLHRKTGDLFVKEKLDRESLCGKADPCVLHFEVVLVEPLQSFRAEVRVFDIND 128
+ NK + L TG+L + EKLDR+ LCG +PCVLHF+VVL PLQ FR E+ V DIND
Sbjct: 69 DDNKKYLHLDLLTGNLLLNEKLDRDELCGSTEPCVLHFQVVLENPLQFFRFELCVKDIND 128
Query: 129 NAPVFLNKEPLLKIPESTPLGSRFPLQSAQDLDVGLNGLQNYTLSANGYFHLHTRFCSHG 188
++P FL+KE L+KI E T +G+ F ++SAQDLDVG N LQNYT+S N +F++ S
Sbjct: 129 HSPTFLDKEILIKISEGTTVGATFLMESAQDLDVGSNSLQNYTISPNSHFYIKIPDSSDR 188
Query: 189 PKYAELVLNKPLDREEQPEVNLTITAVDGGSPPKSGTAHIHVVVLDVNDHVPQFSRLVYR 248
Y ELVL++ LD E++ E+ LT+TAVDGGSPPKSGT + + VLD+ND+ P+F + +Y
Sbjct: 189 KIYPELVLDRALDYEQEAELRLTLTAVDGGSPPKSGTTLVLIKVLDINDNAPEFPQSLYE 248
Query: 249 AQVSENSPNGSLVATVTAVDLDEGTNKAITYSLAQNPEAILKTFQIDPQNGEVRLRGPLD 308
QV E+ P GS +AT++A DLD G I+Y+ E I KTF+I+P +GEV LR PLD
Sbjct: 249 VQVPEDRPLGSWIATISAKDLDAGNYGKISYTFFHASEDIRKTFEINPISGEVNLRSPLD 308
Query: 309 FEAIETYDIDIQATDGGGLSAHSKVLVEVVDVNDNPPEVMVSSVSSPLPEDSPPQTVVAL 368
FE I++Y I+IQATDGGGLS +LV+V+D+NDNPPEV +SS++ +PE++ +T+VAL
Sbjct: 309 FEVIQSYTINIQATDGGGLSGKCTLLVKVMDINDNPPEVTISSITKRIPENAS-ETLVAL 367
Query: 369 FTIRDRDIRVGGKVTCFLREDLPFVIKPTFGNSYSLVTDRSLDREEVSGYNITIVAMDTG 428
F+I D+D G++ C ++++LPF +KPTF N ++LV++++LDRE + YNITI D G
Sbjct: 368 FSILDQDSGDNGRMICSIQDNLPFFLKPTFKNFFTLVSEKALDRESQAEYNITITVTDLG 427
Query: 429 PPSLSAETMIEVLISDVNDNPPIFREDSYILTVRENNSPAVFIGKVHAEDLDLGENAQIT 488
P L E I VL+SDVNDN P F + SY L VRENNSPA+ IG V A D D G NAQ+
Sbjct: 428 TPRLKTEYNITVLLSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVN 487
Query: 489 YSLLPPKNGDLSVFAYISINSGNGKLYALRTMDYEAIQDFQFVVKATDGGFLSLSSQVTV 548
YSLLPP++ L + + +SIN+ NG L+ALR++DYEA+Q+F+F V ATD G +LSS+ V
Sbjct: 488 YSLLPPQDRHLPLASLVSINADNGHLFALRSLDYEALQEFEFRVGATDRGSPALSSEALV 547
Query: 549 RVVVLDDNDNRPMILYPLQNGTLPCNDLVPRSAEAGYLVTKVVAVDGDSGQNSWLSYHLL 608
RV+VLD NDN P +LYPLQNG+ PC +LVPR+AE GYLVTKVVAVDGDSGQN+WLSY LL
Sbjct: 548 RVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLL 607
Query: 609 KATDLGLFSVQRQNGEIHTLRQISERDPMMQKLIILVQDHGQPALSTTVSLNILLVDGFS 668
KAT+ GLF V NGE+ T R +SERD +L++LV+D+G+P S T +L++LLVDGFS
Sbjct: 608 KATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFS 667
Query: 669 EPYLQFQDPTKHSRKVNPSTKYLVISLVILSFLFLLSVIVIFIIHVYQKIKYREKFTIQE 728
+PYL + + + T YLV++L +S LFL SV++ + + ++ + ++
Sbjct: 668 QPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSR---AASVGR 724
Query: 729 HFYDDCNFSNNLVQGQGNGSLSRPCPYEMCSATGTGNSEFRFLKRFMPNFPFPHATG 785
+ F +LV G G+LS+ YE+C G+G +EF+FLK +PNF H TG
Sbjct: 725 CSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNFQV-HDTG 780
>gi|7661662 protocadherin beta 5 precursor [Homo sapiens]
Length = 795
Score = 776 bits (2003), Expect = 0.0
Identities = 405/780 (51%), Positives = 540/780 (69%), Gaps = 6/780 (0%)
Query: 7 KSLQNRQVGSLLIFLCISVGDATTIRYSVAEEMESGSFVANVAKDLGLEVGKLAARGARL 66
K+ Q RQV L I L + + +RYS+ EE ESG VAN+AKDLGL VG+LA RGAR+
Sbjct: 7 KTPQKRQVMFLAILLLLWEAGSEAVRYSIPEETESGYSVANLAKDLGLGVGELATRGARM 66
Query: 67 VSEGNKMHFRLHRKTGDLFVKEKLDRESLCGKADPCVLHFEVVLVEPLQSFRAEVRVFDI 126
+GNK +L KTG+L + EKLDRE +CG +PC+LHF+++L P+Q F+ ++++ DI
Sbjct: 67 HYKGNKELLQLDIKTGNLLLYEKLDREVMCGATEPCILHFQLLLENPVQFFQTDLQLTDI 126
Query: 127 NDNAPVFLNKEPLLKIPESTPLGSRFPLQSAQDLDVGLNGLQNYTLSANGYFHLHTRFCS 186
ND+AP F KE LLKIPEST G+ FPL+ AQD D+G N +QNYT+S N +FH+ T
Sbjct: 127 NDHAPEFPEKEMLLKIPESTQPGTVFPLKIAQDFDIGSNTVQNYTISPNSHFHVATHNRG 186
Query: 187 HGPKYAELVLNKPLDREEQPEVNLTITAVDGGSPPKSGTAHIHVVVLDVNDHVPQFSRLV 246
G KY ELVL+K LDREE+PE++LT+TA+DGG+PP+SGT I +VVLD ND+ P+F +
Sbjct: 187 DGRKYPELVLDKALDREERPELSLTLTALDGGAPPRSGTTTIRIVVLDNNDNAPEFLQSF 246
Query: 247 YRAQVSENSPNGSLVATVTAVDLDEGTNKAITYSLAQNPEAILKTFQIDPQNGEVRLRGP 306
Y QV ENSP SLV V+A DLD G ++ Y+L Q E + + F ID + E+RL+
Sbjct: 247 YEVQVPENSPLNSLVVVVSARDLDAGAYGSVAYALFQGDE-VTQPFVIDEKTAEIRLKRA 305
Query: 307 LDFEAIETYDIDIQATDGGGLSAHSKVLVEVVDVNDNPPEVMVSSVSSPLPEDSPPQTVV 366
LDFEA Y+++I ATDGGGLS V +EVVDVNDN PE+ +S++SSP PE++P +TVV
Sbjct: 306 LDFEATPYYNVEIVATDGGGLSGKCTVAIEVVDVNDNAPELTMSTLSSPTPENAP-ETVV 364
Query: 367 ALFTIRDRDIRVGGKVTCFLREDLPFVIKPTFGNSYSLVTDRSLDREEVSGYNITIVAMD 426
A+F++ D D G++ C ++ DLPF++KPT N Y+LVT R+LDRE + YNITI D
Sbjct: 365 AVFSVSDPDSGDNGRMICSIQNDLPFLLKPTLKNFYTLVTQRTLDRESQAEYNITITVTD 424
Query: 427 TGPPSLSAETMIEVLISDVNDNPPIFREDSYILTVRENNSPAVFIGKVHAEDLDLGENAQ 486
G P L E I VL+SDVNDN P F + SY L VRENNSPA+ IG V A D D G NAQ
Sbjct: 425 MGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQ 484
Query: 487 ITYSLLPPKNGDLSVFAYISINSGNGKLYALRTMDYEAIQDFQFVVKATDGGFLSLSSQV 546
+TYSLLPP+N L + + +SIN+ NG L+ALR++DYEA+Q F+F V ATD G +LSS+
Sbjct: 485 VTYSLLPPQNPHLRLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSSEA 544
Query: 547 TVRVVVLDDNDNRPMILYPLQNGTLPCNDLVPRSAEAGYLVTKVVAVDGDSGQNSWLSYH 606
VRV+VLD NDN P +LYPLQNG+ PC +LVPR+AE GYLVTKVVAVDGDSGQN+WLSY
Sbjct: 545 LVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQ 604
Query: 607 LLKATDLGLFSVQRQNGEIHTLRQISERDPMMQKLIILVQDHGQPALSTTVSLNILLVDG 666
LLKAT+ GLFS+ NGE+ T R +SERD +L++LV+D+G+P S T +L++LLVDG
Sbjct: 605 LLKATEPGLFSMWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDG 664
Query: 667 FSEPYLQFQDPTKHSRKVNPSTKYLVISLVILSFLFLLSVIVIFIIHVYQKIKYREKFTI 726
FS+PYL + + + T YLV++L +S LFL SV++ + + ++ + ++
Sbjct: 665 FSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSR---AASV 721
Query: 727 QEHFYDDCNFSNNLVQGQGNGSLSRPCPYEMCSATGTGNSEFRFLKRFMPNFPFPHATGE 786
+ F +LV G G+LS+ YE+C +G EF+FLK +PN P GE
Sbjct: 722 GRCSVPEGPFPGHLVDVSGTGTLSQSYHYEVCLTGDSGAGEFKFLKPIIPNL-LPQGAGE 780
>gi|9256606 protocadherin beta 12 precursor [Homo sapiens]
Length = 795
Score = 773 bits (1996), Expect = 0.0
Identities = 398/778 (51%), Positives = 546/778 (70%), Gaps = 5/778 (0%)
Query: 8 SLQNRQVGSLLIFLCISVGDATTIRYSVAEEMESGSFVANVAKDLGLEVGKLAARGARLV 67
+LQ RQV + L +S + T + V EE++SGSFV N+AK LGLEV +L++RGAR+V
Sbjct: 8 TLQIRQVLLFFVLLGMSQAGSETGNFLVMEELQSGSFVGNLAKTLGLEVSELSSRGARVV 67
Query: 68 SEGNKMHFRLHRKTGDLFVKEKLDRESLCGKADPCVLHFEVVLVEPLQSFRAEVRVFDIN 127
S NK +L TGDL ++E LDRE LCG +PCVL+F+V++ P Q + E++V DIN
Sbjct: 68 SNDNKECLQLDTNTGDLLLREMLDREELCGSNEPCVLYFQVLMKNPTQFLQIELQVRDIN 127
Query: 128 DNAPVFLNKEPLLKIPESTPLGSRFPLQSAQDLDVGLNGLQNYTLSANGYFHLHTRFCSH 187
D++PVFL KE LL+IPE++P+G+ F L+SA+DLDVG+N +++YT++ N +FH+ R
Sbjct: 128 DHSPVFLEKEMLLEIPENSPVGAVFLLESAKDLDVGINAVKSYTINPNSHFHVKIRVNPD 187
Query: 188 GPKYAELVLNKPLDREEQPEVNLTITAVDGGSPPKSGTAHIHVVVLDVNDHVPQFSRLVY 247
KY ELVL+K LD EE+PE++ +TA+DGGSPP+SGTA + VVV+D+ND+ P+F + Y
Sbjct: 188 NRKYPELVLDKALDYEERPELSFILTALDGGSPPRSGTALVRVVVVDINDNSPEFEQAFY 247
Query: 248 RAQVSENSPNGSLVATVTAVDLDEGTNKAITYSLAQNPEAILKTFQIDPQNGEVRLRGPL 307
++ ENS GSLV TV+A DLD GTN ++Y+ + E I KTF+I+ ++G++ L PL
Sbjct: 248 EVKILENSILGSLVVTVSAWDLDSGTNSELSYTFSHASEDIRKTFEINQKSGDITLTAPL 307
Query: 308 DFEAIETYDIDIQATDGGGLSAHSKVLVEVVDVNDNPPEVMVSSVSSPLPEDSPPQTVVA 367
DFEAIE+Y I IQATDGGGL S V ++V+DVNDN PE+ VSS++SP+PE++P +TVV
Sbjct: 308 DFEAIESYSIIIQATDGGGLFGKSTVRIQVMDVNDNAPEITVSSITSPIPENTP-ETVVM 366
Query: 368 LFTIRDRDIRVGGKVTCFLREDLPFVIKPTFGNSYSLVTDRSLDREEVSGYNITIVAMDT 427
+F IRDRD GK+ C + ED+PFV+K + N Y+L T+R LDRE + YNITI D
Sbjct: 367 VFRIRDRDSGDNGKMVCSIPEDIPFVLKSSVNNYYTLETERPLDRESRAEYNITITVTDL 426
Query: 428 GPPSLSAETMIEVLISDVNDNPPIFREDSYILTVRENNSPAVFIGKVHAEDLDLGENAQI 487
G P L E I VL+SDVNDN P F + SY L VRENNSPA+ IG + A D D G NAQ+
Sbjct: 427 GTPRLKTEHNITVLVSDVNDNAPAFTQTSYALFVRENNSPALHIGSISATDRDSGTNAQV 486
Query: 488 TYSLLPPKNGDLSVFAYISINSGNGKLYALRTMDYEAIQDFQFVVKATDGGFLSLSSQVT 547
YSLLP ++ L + + +SIN+ NG L+ALR++DYEA+Q FQF V ATD G +LSS+
Sbjct: 487 NYSLLPSQDPHLPLASLVSINADNGHLFALRSLDYEALQGFQFRVGATDHGSPALSSEAL 546
Query: 548 VRVVVLDDNDNRPMILYPLQNGTLPCNDLVPRSAEAGYLVTKVVAVDGDSGQNSWLSYHL 607
VRV+VLD NDN P +LYPLQNG+ PC +LVP +AE GYLVTKVVAVDGDSGQN+WLSY L
Sbjct: 547 VRVLVLDANDNSPFVLYPLQNGSAPCTELVPWAAEPGYLVTKVVAVDGDSGQNAWLSYQL 606
Query: 608 LKATDLGLFSVQRQNGEIHTLRQISERDPMMQKLIILVQDHGQPALSTTVSLNILLVDGF 667
LKAT+ GLF V NGE+ T R +SERD +L++LV+D+G+P S T +L++LLVDGF
Sbjct: 607 LKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGF 666
Query: 668 SEPYLQFQDPTKHSRKVNPSTKYLVISLVILSFLFLLSVIVIFIIHVYQKIKYREKFTIQ 727
S+PYL + + + T YLV++L +S LFL SV++ + + ++ + +
Sbjct: 667 SQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSR---AAPVG 723
Query: 728 EHFYDDCNFSNNLVQGQGNGSLSRPCPYEMCSATGTGNSEFRFLKRFMPNFPFPHATG 785
+ F +LV G G+LS+ YE+C G+ +++F+FLK +PNF P +TG
Sbjct: 724 RCSVPEGPFPGHLVDVSGTGTLSQSYHYEVCVTGGSRSNKFKFLKPIIPNF-LPQSTG 780
>gi|9256618 protocadherin beta 6 precursor [Homo sapiens]
Length = 794
Score = 769 bits (1985), Expect = 0.0
Identities = 401/781 (51%), Positives = 547/781 (70%), Gaps = 7/781 (0%)
Query: 10 QNRQVGSLLIFLCISVGDATTIRYSVAEEMESGSFVANVAKDLGLEVGKLAARGARLVSE 69
+ RQV ++ + + +I+YSV EE ESG+FVAN+ KDLGL VG+LA+RGAR+V +
Sbjct: 9 KKRQVAFFILLMLWGEVGSESIQYSVLEETESGTFVANLTKDLGLRVGELASRGARVVFK 68
Query: 70 GNKMHFRLHRKTGDLFVKEKLDRESLCGKADPCVLHFEVVLVEPLQSFRAEVRVFDINDN 129
GN+ H + +T DL + EKLDRE LCG +PCVL F+V+L PLQ F+A +RV DIND+
Sbjct: 69 GNRQHLQFDPQTHDLLLNEKLDREELCGSTEPCVLPFQVLLENPLQFFQASLRVRDINDH 128
Query: 130 APVFLNKEPLLKIPESTPLGSRFPLQSAQDLDVGLNGLQNYTLSANGYFHLHTRFCSHGP 189
AP F +E LLKI E T G FPL+ A DLD G NGLQ YT+S+N +FH+ TR S G
Sbjct: 129 APEFPAREMLLKISEITMPGKIFPLKMAHDLDTGSNGLQRYTISSNPHFHVLTRNRSEGR 188
Query: 190 KYAELVLNKPLDREEQPEVNLTITAVDGGSPPKSGTAHIHVVVLDVNDHVPQFSRLVYRA 249
K+ ELVL+KPLDREEQP++ LT+ A+DGGSPP+SGT+ I + VLD+ND+VP+F++ +Y A
Sbjct: 189 KFPELVLDKPLDREEQPQLRLTLIALDGGSPPRSGTSEIQIQVLDINDNVPEFAQELYEA 248
Query: 250 QVSENSPNGSLVATVTAVDLDEGTNKAITYSLAQNPEAILKTFQIDPQNGEVRLRGPLDF 309
QV EN+P GSLV TV+A DLD G+ ++Y+L Q + + + F+I+ GE+RLR LDF
Sbjct: 249 QVPENNPLGSLVITVSARDLDAGSFGKVSYALFQVDD-VNQPFEINAITGEIRLRKALDF 307
Query: 310 EAIETYDIDIQATDGGGLSAHSKVLVEVVDVNDNPPEVMVSSVSSPLPEDSPPQTVVALF 369
E I++YD+D++ATDGGGLS ++V V+DVNDN PE+ +S S +PE+ P TV A+F
Sbjct: 308 EEIQSYDVDVEATDGGGLSGKCSLVVRVLDVNDNAPELTMSFFISLIPENLPEITV-AVF 366
Query: 370 TIRDRDIRVGGKVTCFLREDLPFVIKPTFGNSYSLVTDRSLDREEVSGYNITIVAMDTGP 429
++ D D +V C + +LPF+++P+ N Y+LVT+ +LDRE + YNITI D G
Sbjct: 367 SVSDADSGHNQQVICSIENNLPFLLRPSVENFYTLVTEGALDRESRAEYNITITVTDLGT 426
Query: 430 PSLSAETMIEVLISDVNDNPPIFREDSYILTVRENNSPAVFIGKVHAEDLDLGENAQITY 489
P L + I V +SDVNDN P F + SY L VRENNSPA+ IG V A D D G NAQ+TY
Sbjct: 427 PRLKTQQSITVQVSDVNDNVPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGINAQVTY 486
Query: 490 SLLPPKNGDLSVFAYISINSGNGKLYALRTMDYEAIQDFQFVVKATDGGFLSLSSQVTVR 549
SLLPP++ L + + +SIN+ NG L+ALR++DYEA+Q F+F V ATD G +LSS+ VR
Sbjct: 487 SLLPPQDPHLPLSSLVSINADNGHLFALRSLDYEALQSFEFRVGATDRGSPALSSEALVR 546
Query: 550 VVVLDDNDNRPMILYPLQNGTLPCNDLVPRSAEAGYLVTKVVAVDGDSGQNSWLSYHLLK 609
++VLD NDN P +LYPLQNG+ PC +LVPR+AE GYLVTKVVAVDGDSGQN+WLSY LLK
Sbjct: 547 LLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK 606
Query: 610 ATDLGLFSVQRQNGEIHTLRQISERDPMMQKLIILVQDHGQPALSTTVSLNILLVDGFSE 669
AT+LGLF V NGE+ T R +SERD +L++LV+D+G+P S T +L++LLVDGFS+
Sbjct: 607 ATELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQ 666
Query: 670 PYLQFQDPTKHSRKVNPSTKYLVISLVILSFLFLLSVIVIFIIHVYQKIKYREKFTIQEH 729
PYL + + + T YLV++L +S LFL SV++ + + ++ + ++ +
Sbjct: 667 PYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSR---AASVGRY 723
Query: 730 FYDDCNFSNNLVQGQGNGSLSRPCPYEMCSATGTGNSEFRFLKRFMPNFPFPHATGEIKM 789
+ F +LV G G+LS+ Y++C G+ +EF+FLK MPNFP P T E +M
Sbjct: 724 SVPEGPFPGHLVDVSGTGTLSQSYQYKVCLTGGSETNEFKFLKPIMPNFP-PQGT-EREM 781
Query: 790 E 790
E
Sbjct: 782 E 782
>gi|14195616 protocadherin beta 9 precursor [Homo sapiens]
Length = 797
Score = 768 bits (1984), Expect = 0.0
Identities = 400/787 (50%), Positives = 544/787 (69%), Gaps = 6/787 (0%)
Query: 10 QNRQVGSLLIFLCISVGDATTIRYSVAEEMESGSFVANVAKDLGLEVGKLAARGARLVSE 69
+ RQV L +F +S+ + RYSV EE E GSFV N+AKDLGL G+LAARG R+VS+
Sbjct: 10 RQRQVLFLFLFWGVSLAGSGFGRYSVTEETEKGSFVVNLAKDLGLAEGELAARGTRVVSD 69
Query: 70 GNKMHFRLHRKTGDLFVKEKLDRESLCGKADPCVLHFEVVLVEPLQSFRAEVRVFDINDN 129
NK + L TG+L EKLDRE LCG +PC+L+F++++ +P Q +RAE+RV DIND+
Sbjct: 70 DNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAELRVRDINDH 129
Query: 130 APVFLNKEPLLKIPESTPLGSRFPLQSAQDLDVGLNGLQNYTLSANGYFHLHTRFCSHGP 189
+PVF +KE +LKI E+T G+ F L+ AQD D G N +QNYT+S+N +FH+ G
Sbjct: 130 SPVFRHKEMVLKISENTAEGTAFRLERAQDPDEGHNSIQNYTISSNSFFHIKISGSDEGM 189
Query: 190 KYAELVLNKPLDREEQPEVNLTITAVDGGSPPKSGTAHIHVVVLDVNDHVPQFSRLVYRA 249
Y ELVL+K LDREEQ E++LT+TA+DGGSP +SGT+ I +VVLDVND+ PQF++ +Y
Sbjct: 190 IYPELVLDKALDREEQEELSLTLTALDGGSPSRSGTSTIRIVVLDVNDNAPQFAQALYET 249
Query: 250 QVSENSPNGSLVATVTAVDLDEGTNKAITYSLAQNPEAILKTFQIDPQNGEVRLRGPLDF 309
Q ENSP GSL+ V+A D D G N ++YS E IL TFQI+P +GE+ LR LD+
Sbjct: 250 QAPENSPVGSLIVKVSAGDADSGVNAEVSYSFFDASEDILTTFQINPFSGEIFLRELLDY 309
Query: 310 EAIETYDIDIQATDGGGLSAHSKVLVEVVDVNDNPPEVMVSSVSSPLPEDSPPQTVVALF 369
E + +Y I+IQA DGGGLSA VL++V+D NDNPPE+++SS+S+ + E+SP V+A+F
Sbjct: 310 ELVNSYKINIQAMDGGGLSARCTVLIKVLDSNDNPPELIISSLSNSVAENSPG-IVLAVF 368
Query: 370 TIRDRDIRVGGKVTCFLREDLPFVIKPTFGNSYSLVTDRSLDREEVSGYNITIVAMDTGP 429
I+DRD GK C+++++LPF +KP+ N Y L+T+ +LDRE + YNITI D G
Sbjct: 369 KIKDRDSGENGKTICYVQDNLPFFLKPSVDNFYILMTEGALDRESKAEYNITITVTDLGT 428
Query: 430 PSLSAETMIEVLISDVNDNPPIFREDSYILTVRENNSPAVFIGKVHAEDLDLGENAQITY 489
P L E I + +SDVNDN P F + SY L VRENNSPA+ IG V A D D G NAQ+TY
Sbjct: 429 PRLKTEHSITLQVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTY 488
Query: 490 SLLPPKNGDLSVFAYISINSGNGKLYALRTMDYEAIQDFQFVVKATDGGFLSLSSQVTVR 549
SLLPP++ L + + +SIN+ NG L+ALR++DYEA+Q F F V A+D G +LSS+ VR
Sbjct: 489 SLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFDFRVGASDRGSPALSSEALVR 548
Query: 550 VVVLDDNDNRPMILYPLQNGTLPCNDLVPRSAEAGYLVTKVVAVDGDSGQNSWLSYHLLK 609
V+VLD NDN P +LYPLQNG+ PC +LVPR+AE GYLVTKVVAVDGDSGQN+WLSY LLK
Sbjct: 549 VLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK 608
Query: 610 ATDLGLFSVQRQNGEIHTLRQISERDPMMQKLIILVQDHGQPALSTTVSLNILLVDGFSE 669
AT+ GLF V NGE+ T R +SERD +L++LV+D+G+P S T +L++LLVDGFS+
Sbjct: 609 ATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQ 668
Query: 670 PYLQFQDPTKHSRKVNPSTKYLVISLVILSFLFLLSVIVIFIIHVYQKIKYREKFTIQEH 729
PYL + + + T YLV++L +S LFLLSV++ + + ++ + ++
Sbjct: 669 PYLPLPEAAPAQAQADLLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSR---AASVGRC 725
Query: 730 FYDDCNFSNNLVQGQGNGSLSRPCPYEMCSATGTGNSEFRFLKRFMPNFPFPHATGEIKM 789
+ F +LV G G+L + YE+C G+ EF+FLK P+ P PH G+ ++
Sbjct: 726 SVPEGPFPGHLVDVSGTGTLFQSYQYEVCLTGGSETGEFKFLKPITPHLP-PHRGGK-EI 783
Query: 790 EAGSSLP 796
E S+LP
Sbjct: 784 EENSTLP 790
>gi|9256602 protocadherin beta 10 precursor [Homo sapiens]
Length = 800
Score = 768 bits (1983), Expect = 0.0
Identities = 400/765 (52%), Positives = 537/765 (70%), Gaps = 6/765 (0%)
Query: 10 QNRQVGSLLIFLCISVGDATTIRYSVAEEMESGSFVANVAKDLGLEVGKLAARGARLVSE 69
+ RQV L +F +S+ + RYSV EE E GSFV N+AKDLGL G+LAARG R+VS+
Sbjct: 10 RQRQVLFLFLFWGVSLAGSGFGRYSVTEETEKGSFVVNLAKDLGLAEGELAARGTRVVSD 69
Query: 70 GNKMHFRLHRKTGDLFVKEKLDRESLCGKADPCVLHFEVVLVEPLQSFRAEVRVFDINDN 129
NK + L TG+L EKLDRE LCG +PC+L+F++++ +P Q +RAE+RV DIND+
Sbjct: 70 DNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAELRVRDINDH 129
Query: 130 APVFLNKEPLLKIPESTPLGSRFPLQSAQDLDVGLNGLQNYTLSANGYFHLHTRFCSHGP 189
APVF +KE +LKI E+T G+ F L+ AQD D GLNG+QNYT+S N +FH++ G
Sbjct: 130 APVFQDKETVLKISENTAEGTAFRLERAQDPDGGLNGIQNYTISPNSFFHINISGGDEGM 189
Query: 190 KYAELVLNKPLDREEQPEVNLTITAVDGGSPPKSGTAHIHVVVLDVNDHVPQFSRLVYRA 249
Y ELVL+K LDREEQ E++LT+TA+DGGSP +SGT+ + +VVLDVND+ PQF++ +Y
Sbjct: 190 IYPELVLDKALDREEQGELSLTLTALDGGSPSRSGTSTVRIVVLDVNDNAPQFAQALYET 249
Query: 250 QVSENSPNGSLVATVTAVDLDEGTNKAITYSLAQNPEAILKTFQIDPQNGEVRLRGPLDF 309
Q ENSP G L+ V A D+D G N ++YS E I TFQI+P +GE+ LR LD+
Sbjct: 250 QAPENSPIGFLIVKVWAEDVDSGVNAEVSYSFFDASENIRTTFQINPFSGEIFLRELLDY 309
Query: 310 EAIETYDIDIQATDGGGLSAHSKVLVEVVDVNDNPPEVMVSSVSSPLPEDSPPQTVVALF 369
E + +Y I+IQA DGGGLSA +VLVEV+D NDNPPE++VSS S+ + E+S P+T +A+F
Sbjct: 310 ELVNSYKINIQAMDGGGLSARCRVLVEVLDTNDNPPELIVSSFSNSVAENS-PETPLAVF 368
Query: 370 TIRDRDIRVGGKVTCFLREDLPFVIKPTFGNSYSLVTDRSLDREEVSGYNITIVAMDTGP 429
I DRD GK+ C+++E+LPF++KP+ N Y L+T+ +LDRE + YNITI D G
Sbjct: 369 KINDRDSGENGKMVCYIQENLPFLLKPSVENFYILITEGALDREIRAEYNITITVTDLGT 428
Query: 430 PSLSAETMIEVLISDVNDNPPIFREDSYILTVRENNSPAVFIGKVHAEDLDLGENAQITY 489
P L E I VL+SDVNDN P F + SY L VRENNSPA+ IG V A D D G NAQ+TY
Sbjct: 429 PRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTY 488
Query: 490 SLLPPKNGDLSVFAYISINSGNGKLYALRTMDYEAIQDFQFVVKATDGGFLSLSSQVTVR 549
SLLPP++ L + + +SIN+ NG L+ALR++DYEA+Q F+F V ATD G +LS + VR
Sbjct: 489 SLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSREALVR 548
Query: 550 VVVLDDNDNRPMILYPLQNGTLPCNDLVPRSAEAGYLVTKVVAVDGDSGQNSWLSYHLLK 609
V+VLD NDN P +LYPLQNG+ PC +LVPR+AE GYLVTKVVAVDGDSGQN+WLSY LLK
Sbjct: 549 VLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK 608
Query: 610 ATDLGLFSVQRQNGEIHTLRQISERDPMMQKLIILVQDHGQPALSTTVSLNILLVDGFSE 669
AT+ GLF V NGE+ T R +SERD +L++LV+D+G+P S T +L++LLVDGFS+
Sbjct: 609 ATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHLLLVDGFSQ 668
Query: 670 PYLQFQD--PTKHSRKVNPSTKYLVISLVILSFLFLLSVIVIFIIHVYQKIKYREKFTIQ 727
PYL + P + + + T YLV++L +S LFLLSV++ + + ++ + ++
Sbjct: 669 PYLPLPEAAPAQAQAEADLLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSR---AASVG 725
Query: 728 EHFYDDCNFSNNLVQGQGNGSLSRPCPYEMCSATGTGNSEFRFLK 772
+ F +LV +G +LS+ YE+C G G SEF+FLK
Sbjct: 726 RCSVPEGPFPGHLVDVRGAETLSQSYQYEVCLTGGPGTSEFKFLK 770
>gi|9256604 protocadherin beta 11 precursor [Homo sapiens]
Length = 797
Score = 767 bits (1980), Expect = 0.0
Identities = 395/775 (50%), Positives = 538/775 (69%), Gaps = 6/775 (0%)
Query: 3 GTRRKSLQNRQVGSLLIFLCISVGDATTIRYSVAEEMESGSFVANVAKDLGLEVGKLAAR 62
GTR + + RQV L + L +S + T +SVAEEM+SGSFV N+AKDLGL+V +L++R
Sbjct: 5 GTRTQQI--RQVLLLFVLLGMSQAGSETWSFSVAEEMQSGSFVGNLAKDLGLKVRELSSR 62
Query: 63 GARLVSEGNKMHFRLHRKTGDLFVKEKLDRESLCGKADPCVLHFEVVLVEPLQSFRAEVR 122
GAR+VS K +L TGDL + E LDRE LCG +PCVLH +V++ P Q + E++
Sbjct: 63 GARVVSNDKKQRLQLDINTGDLLLSETLDREELCGSIEPCVLHLQVLMQNPTQFLQIELQ 122
Query: 123 VFDINDNAPVFLNKEPLLKIPESTPLGSRFPLQSAQDLDVGLNGLQNYTLSANGYFHLHT 182
V DIND++P+F K+ LL+IPE++P+G+ F L+SA+DLDVG+N +++YT+S N +FH+
Sbjct: 123 VRDINDHSPIFSEKQMLLEIPENSPVGAVFLLESAKDLDVGINAVKSYTISPNSHFHIKM 182
Query: 183 RFCSHGPKYAELVLNKPLDREEQPEVNLTITAVDGGSPPKSGTAHIHVVVLDVNDHVPQF 242
R KY ELVL+K LD EE PE++ ++A+DGGSPP+SGTA + VVV+D+ND+ P+F
Sbjct: 183 RVIPDNRKYPELVLDKALDYEELPELSFILSALDGGSPPRSGTALVRVVVVDINDNSPEF 242
Query: 243 SRLVYRAQVSENSPNGSLVATVTAVDLDEGTNKAITYSLAQNPEAILKTFQIDPQNGEVR 302
+ Y ++ ENS GSL+ V+A DLD GTN I Y+ + E I KTF+I+ ++GE+
Sbjct: 243 EQAFYEVKIRENSILGSLILIVSAWDLDSGTNGEICYTFSHASEDIRKTFEINQKSGEIT 302
Query: 303 LRGPLDFEAIETYDIDIQATDGGGLSAHSKVLVEVVDVNDNPPEVMVSSVSSPLPEDSPP 362
LR PLDFE IE+Y I IQATDGGGL S V++ V+DVNDN PE+ VSS++SP+PE++P
Sbjct: 303 LRAPLDFETIESYSIIIQATDGGGLFGKSTVIIHVIDVNDNAPEITVSSITSPIPENTP- 361
Query: 363 QTVVALFTIRDRDIRVGGKVTCFLREDLPFVIKPTFGNSYSLVTDRSLDREEVSGYNITI 422
+TVV +F+I+D D G++ C + EDLPFV+K + N Y+L T+R LDRE + YNITI
Sbjct: 362 ETVVMVFSIQDIDSGDNGRIVCSIPEDLPFVLKSSVENYYTLETERPLDRESTAEYNITI 421
Query: 423 VAMDTGPPSLSAETMIEVLISDVNDNPPIFREDSYILTVRENNSPAVFIGKVHAEDLDLG 482
D G P L E VL+SDVNDN P F + SY L VRENNSPA+ IG V A D D G
Sbjct: 422 TVTDLGIPRLKTEHNTTVLVSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSG 481
Query: 483 ENAQITYSLLPPKNGDLSVFAYISINSGNGKLYALRTMDYEAIQDFQFVVKATDGGFLSL 542
NAQ+ YSLLPP++ L + + +SIN+ NG L+ALR++DYEA+Q F F V ATD G +L
Sbjct: 482 TNAQVNYSLLPPQDLHLPLASLVSINTDNGHLFALRSLDYEALQAFDFRVGATDRGSPAL 541
Query: 543 SSQVTVRVVVLDDNDNRPMILYPLQNGTLPCNDLVPRSAEAGYLVTKVVAVDGDSGQNSW 602
SS+ VRV+VLD NDN P +LYPLQNG+ PC +LVPR+AE GYLVTKVVAVDGDSGQN+W
Sbjct: 542 SSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAW 601
Query: 603 LSYHLLKATDLGLFSVQRQNGEIHTLRQISERDPMMQKLIILVQDHGQPALSTTVSLNIL 662
LSY LLKAT+ GLF V NGE+ T R +SERD +L++LV+D+G+P S T +L +L
Sbjct: 602 LSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLQVL 661
Query: 663 LVDGFSEPYLQFQDPTKHSRKVNPSTKYLVISLVILSFLFLLSVIVIFIIHVYQKIKYRE 722
LVDGFS+PYL + + + T YLV++L +S LFL SV++ + + ++ +
Sbjct: 662 LVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSR--- 718
Query: 723 KFTIQEHFYDDCNFSNNLVQGQGNGSLSRPCPYEMCSATGTGNSEFRFLKRFMPN 777
++ F +LV G G+LS+ YE+C G+ +EF+FLK +PN
Sbjct: 719 AASVGSCSVPKGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSETNEFKFLKPVIPN 773
>gi|11056032 protocadherin gamma subfamily A, 1 isoform 1 precursor
[Homo sapiens]
Length = 931
Score = 604 bits (1557), Expect = e-172
Identities = 329/714 (46%), Positives = 450/714 (63%), Gaps = 18/714 (2%)
Query: 9 LQNRQVG-SLLIFLCISV-----GDATTIRYSVAEEMESGSFVANVAKDLGLEVGKLAAR 62
+Q + G S L+ LC+S+ A I YSV EE + GSFV N+AKDLGL+ +LA
Sbjct: 3 IQKKLTGCSRLMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADG 62
Query: 63 GARLVSEGNKMHFRLHRKTGDLFVKEKLDRESLCGKADPCVLHFEVVLVEPLQSFRAEVR 122
G R+VS G F L+ ++G L ++DRE LC ++ PC++ F +++ + ++ F EV
Sbjct: 63 GVRIVSRGRMPLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVE 122
Query: 123 VFDINDNAPVFLNKEPLLKIPESTPLGSRFPLQSAQDLDVGLNGLQNYTLSANGYFHLHT 182
+ DINDN P F +E K+ E T G+R L QDLDVG+N LQ+Y LS+N +F L
Sbjct: 123 IIDINDNTPQFQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDV 182
Query: 183 RFCSHGPKYAELVLNKPLDREEQPEVNLTITAVDGGSPPKSGTAHIHVVVLDVNDHVPQF 242
+ + GP++ E+VL PLDREE+ +L +TA DGG P +SGT I++ V+D ND+ P F
Sbjct: 183 QQGADGPQHPEMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAF 242
Query: 243 SRLVYRAQVSENSPNGSLVATVTAVDLDEGTNKAITYSLAQNPEAILKTFQIDPQNGEVR 302
++ Y V EN P G+ + V A D DEG N +TYS + + F++D GE+
Sbjct: 243 TQAQYHINVPENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEIS 302
Query: 303 LRGPLDFEAIETYDIDIQATDGGGLSAHSKVLVEVVDVNDNPPEVMVSSVSSPLPEDSPP 362
+ PLDFE + Y +++QA DG GL A KVL++V+DVNDN PEV ++SV++ +PE+ PP
Sbjct: 303 NKEPLDFEEYKMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPP 362
Query: 363 QTVVALFTIRDRDIRVGGKVTCFLREDLPFVIKPTFGNSYSLVTDRSLDREEVSGYNITI 422
T++AL ++ D+D G TCF+ +LPF ++ N Y LVT+R+LDRE +SGYNITI
Sbjct: 363 GTIIALISVHDQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITI 422
Query: 423 VAMDTGPPSLSAETMIEVLISDVNDNPPIFREDSYILTVRENNSPAVFIGKVHAEDLDLG 482
A+D G P+LS ET I +L++D+NDN P+F +DSY + ENN I V A DLD
Sbjct: 423 TAIDQGTPALSTETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSN 482
Query: 483 ENAQITYSLLPPKNGDLSVFAYISINSGNGKLYALRTMDYEAIQDFQFVVKATDGGFLSL 542
ENAQITYSL+ + AY+SINS G LYALR+ DYE +D Q V A D G L
Sbjct: 483 ENAQITYSLIEDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPL 542
Query: 543 SSQVTVRVVVLDDNDNRPMILYPLQNGTLPCN-----DLVPRSAEAGYLVTKVVAVDGDS 597
SS V++ + +LD NDN P ILYP LP + +L P SAE GYLVTKVVAVD DS
Sbjct: 543 SSNVSLSLFLLDQNDNAPEILYP----ALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDS 598
Query: 598 GQNSWLSYHLLKATDLGLFSVQRQNGEIHTLRQISERDPMMQKLIILVQDHGQPALSTTV 657
GQN+WLSY LLKA++ GLFSV GE+ T R + +RD + Q L++ VQDHGQP LS TV
Sbjct: 599 GQNAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATV 658
Query: 658 SLNILLVDGFSEPYLQFQDPTKHSRKVNPS--TKYLVISLVILSFLFLLSVIVI 709
+L + + D S+ L + S K N S T YLV++ +S +FL VIV+
Sbjct: 659 TLTVAVADRISD-ILADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVL 711
>gi|14196459 protocadherin gamma subfamily A, 1 isoform 2 precursor
[Homo sapiens]
Length = 823
Score = 604 bits (1557), Expect = e-172
Identities = 329/714 (46%), Positives = 450/714 (63%), Gaps = 18/714 (2%)
Query: 9 LQNRQVG-SLLIFLCISV-----GDATTIRYSVAEEMESGSFVANVAKDLGLEVGKLAAR 62
+Q + G S L+ LC+S+ A I YSV EE + GSFV N+AKDLGL+ +LA
Sbjct: 3 IQKKLTGCSRLMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADG 62
Query: 63 GARLVSEGNKMHFRLHRKTGDLFVKEKLDRESLCGKADPCVLHFEVVLVEPLQSFRAEVR 122
G R+VS G F L+ ++G L ++DRE LC ++ PC++ F +++ + ++ F EV
Sbjct: 63 GVRIVSRGRMPLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVE 122
Query: 123 VFDINDNAPVFLNKEPLLKIPESTPLGSRFPLQSAQDLDVGLNGLQNYTLSANGYFHLHT 182
+ DINDN P F +E K+ E T G+R L QDLDVG+N LQ+Y LS+N +F L
Sbjct: 123 IIDINDNTPQFQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDV 182
Query: 183 RFCSHGPKYAELVLNKPLDREEQPEVNLTITAVDGGSPPKSGTAHIHVVVLDVNDHVPQF 242
+ + GP++ E+VL PLDREE+ +L +TA DGG P +SGT I++ V+D ND+ P F
Sbjct: 183 QQGADGPQHPEMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAF 242
Query: 243 SRLVYRAQVSENSPNGSLVATVTAVDLDEGTNKAITYSLAQNPEAILKTFQIDPQNGEVR 302
++ Y V EN P G+ + V A D DEG N +TYS + + F++D GE+
Sbjct: 243 TQAQYHINVPENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEIS 302
Query: 303 LRGPLDFEAIETYDIDIQATDGGGLSAHSKVLVEVVDVNDNPPEVMVSSVSSPLPEDSPP 362
+ PLDFE + Y +++QA DG GL A KVL++V+DVNDN PEV ++SV++ +PE+ PP
Sbjct: 303 NKEPLDFEEYKMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPP 362
Query: 363 QTVVALFTIRDRDIRVGGKVTCFLREDLPFVIKPTFGNSYSLVTDRSLDREEVSGYNITI 422
T++AL ++ D+D G TCF+ +LPF ++ N Y LVT+R+LDRE +SGYNITI
Sbjct: 363 GTIIALISVHDQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITI 422
Query: 423 VAMDTGPPSLSAETMIEVLISDVNDNPPIFREDSYILTVRENNSPAVFIGKVHAEDLDLG 482
A+D G P+LS ET I +L++D+NDN P+F +DSY + ENN I V A DLD
Sbjct: 423 TAIDQGTPALSTETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSN 482
Query: 483 ENAQITYSLLPPKNGDLSVFAYISINSGNGKLYALRTMDYEAIQDFQFVVKATDGGFLSL 542
ENAQITYSL+ + AY+SINS G LYALR+ DYE +D Q V A D G L
Sbjct: 483 ENAQITYSLIEDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPL 542
Query: 543 SSQVTVRVVVLDDNDNRPMILYPLQNGTLPCN-----DLVPRSAEAGYLVTKVVAVDGDS 597
SS V++ + +LD NDN P ILYP LP + +L P SAE GYLVTKVVAVD DS
Sbjct: 543 SSNVSLSLFLLDQNDNAPEILYP----ALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDS 598
Query: 598 GQNSWLSYHLLKATDLGLFSVQRQNGEIHTLRQISERDPMMQKLIILVQDHGQPALSTTV 657
GQN+WLSY LLKA++ GLFSV GE+ T R + +RD + Q L++ VQDHGQP LS TV
Sbjct: 599 GQNAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATV 658
Query: 658 SLNILLVDGFSEPYLQFQDPTKHSRKVNPS--TKYLVISLVILSFLFLLSVIVI 709
+L + + D S+ L + S K N S T YLV++ +S +FL VIV+
Sbjct: 659 TLTVAVADRISD-ILADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVL 711
>gi|14196451 protocadherin gamma subfamily A, 11 isoform 2 precursor
[Homo sapiens]
Length = 837
Score = 596 bits (1536), Expect = e-170
Identities = 327/724 (45%), Positives = 444/724 (61%), Gaps = 15/724 (2%)
Query: 9 LQNRQVGSLLIFLCISVGD-----ATTIRYSVAEEMESGSFVANVAKDLGLEVGKLAARG 63
LQ LL+ LCI +G A IRYSV EE E GSFV N++KDLGLE +LA RG
Sbjct: 5 LQRGDRSRLLLLLCIFLGTLRGFRARQIRYSVPEETEKGSFVGNISKDLGLEPRELAKRG 64
Query: 64 ARLVSEGNKMHFRLHRKTGDLFVKEKLDRESLCGKADPCVLHFEVVLVEPLQSFRAEVRV 123
R+VS G F ++ ++G L ++DRE LC C L+ E+++ + L+ + EV +
Sbjct: 65 VRIVSRGKTQLFAVNPRSGSLITAGRIDREELCETVSSCFLNMELLVEDTLKIYGVEVEI 124
Query: 124 FDINDNAPVFLNKEPLLKIPESTPLGSRFPLQSAQDLDVGLNGLQNYTLSANGYFHLHTR 183
DINDNAP F E +K+ E G+RF L +A+D DVG+N LQ+Y LS N YF L R
Sbjct: 125 IDINDNAPSFQEDEVEIKVSEHAIPGARFALPNARDPDVGVNSLQSYQLSPNNYFSLQLR 184
Query: 184 FCSHGPKYAELVLNKPLDREEQPEVNLTITAVDGGSPPKSGTAHIHVVVLDVNDHVPQFS 243
+ G K ELVL LDRE++ L +TA+DGG P + G I VVVLDVNDH+P F+
Sbjct: 185 GRTDGAKNPELVLEGSLDREKEAAHLLLLTALDGGDPIRKGAVPIRVVVLDVNDHIPMFT 244
Query: 244 RLVYRAQVSENSPNGSLVATVTAVDLDEGTNKAITYSLAQNPEAILKTFQIDPQNGEVRL 303
+ VYR V EN +G+ V V A D DEG N + YS + FQ+D Q GEV++
Sbjct: 245 QSVYRVSVPENISSGTRVLMVNATDPDEGINGEVMYSFRNMESKASEIFQLDSQTGEVQV 304
Query: 304 RGPLDFEAIETYDIDIQATDGGGLSAHSKVLVEVVDVNDNPPEVMVSSVSSPLPEDSPPQ 363
RG LDFE Y+++IQ DGGGL + +L+ VVDVNDN PE+ ++S + + E+SPP
Sbjct: 305 RGSLDFEKYRFYEMEIQGQDGGGLFTTTTMLITVVDVNDNAPEITITSSINSILENSPPG 364
Query: 364 TVVALFTIRDRDIRVGGKVTCFLREDLPFVIKPTFGNSYSLVTDRSLDREEVSGYNITIV 423
TV+AL ++D+D G+V+CF+ LPF ++ T+GN Y L+T R LDRE V YNIT+
Sbjct: 365 TVIALLNVQDQDSGENGQVSCFIPNHLPFKLEKTYGNYYKLITSRVLDRELVQSYNITLT 424
Query: 424 AMDTGPPSLSAETMIEVLISDVNDNPPIFREDSYILTVRENNSPAVFIGKVHAEDLDLGE 483
A D G P LSAET + + ++D NDNPP+F SY + ENN I V A D D +
Sbjct: 425 ATDQGSPPLSAETHVWLNVADDNDNPPVFPHSSYSAYIPENNPRGASIFSVTALDPDSKQ 484
Query: 484 NAQITYSLLPPKNGDLSVFAYISINSGNGKLYALRTMDYEAIQDFQFVVKATDGGFLSLS 543
NA +TYSL + + +Y+SINS G LYAL++ DYE +D + V A D G LS
Sbjct: 485 NALVTYSLTDDTVQGVPLSSYVSINSNTGVLYALQSFDYEQFRDLELRVIARDSGDPPLS 544
Query: 544 SQVTVRVVVLDDNDNRPMILYPLQNGTLPCN-----DLVPRSAEAGYLVTKVVAVDGDSG 598
S V++ + VLD NDN P ILYP LP + +L PRSAE GYLVTKVVAVD DSG
Sbjct: 545 SNVSLSLFVLDQNDNAPEILYP----ALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSG 600
Query: 599 QNSWLSYHLLKATDLGLFSVQRQNGEIHTLRQISERDPMMQKLIILVQDHGQPALSTTVS 658
QN+WLSY LLKA++ GLF+V GE+ T R + +RD + Q L++ VQDHGQP LS TV+
Sbjct: 601 QNAWLSYRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVT 660
Query: 659 LNILLVDGFSEPYLQFQD-PTKHSRKVNPSTKYLVISLVILSFLFLLSVIVIFIIHVYQK 717
L + + D E + + + + + YLV+++ +S +FL+ VIV+ + +++
Sbjct: 661 LTVAVADSIPEVLADLGSLESLANSETSDLSLYLVVAVAAVSCIFLVFVIVLLALRLWRW 720
Query: 718 IKYR 721
K R
Sbjct: 721 HKSR 724
>gi|11128039 protocadherin gamma subfamily A, 11 isoform 1 precursor
[Homo sapiens]
Length = 935
Score = 596 bits (1536), Expect = e-170
Identities = 327/724 (45%), Positives = 444/724 (61%), Gaps = 15/724 (2%)
Query: 9 LQNRQVGSLLIFLCISVGD-----ATTIRYSVAEEMESGSFVANVAKDLGLEVGKLAARG 63
LQ LL+ LCI +G A IRYSV EE E GSFV N++KDLGLE +LA RG
Sbjct: 5 LQRGDRSRLLLLLCIFLGTLRGFRARQIRYSVPEETEKGSFVGNISKDLGLEPRELAKRG 64
Query: 64 ARLVSEGNKMHFRLHRKTGDLFVKEKLDRESLCGKADPCVLHFEVVLVEPLQSFRAEVRV 123
R+VS G F ++ ++G L ++DRE LC C L+ E+++ + L+ + EV +
Sbjct: 65 VRIVSRGKTQLFAVNPRSGSLITAGRIDREELCETVSSCFLNMELLVEDTLKIYGVEVEI 124
Query: 124 FDINDNAPVFLNKEPLLKIPESTPLGSRFPLQSAQDLDVGLNGLQNYTLSANGYFHLHTR 183
DINDNAP F E +K+ E G+RF L +A+D DVG+N LQ+Y LS N YF L R
Sbjct: 125 IDINDNAPSFQEDEVEIKVSEHAIPGARFALPNARDPDVGVNSLQSYQLSPNNYFSLQLR 184
Query: 184 FCSHGPKYAELVLNKPLDREEQPEVNLTITAVDGGSPPKSGTAHIHVVVLDVNDHVPQFS 243
+ G K ELVL LDRE++ L +TA+DGG P + G I VVVLDVNDH+P F+
Sbjct: 185 GRTDGAKNPELVLEGSLDREKEAAHLLLLTALDGGDPIRKGAVPIRVVVLDVNDHIPMFT 244
Query: 244 RLVYRAQVSENSPNGSLVATVTAVDLDEGTNKAITYSLAQNPEAILKTFQIDPQNGEVRL 303
+ VYR V EN +G+ V V A D DEG N + YS + FQ+D Q GEV++
Sbjct: 245 QSVYRVSVPENISSGTRVLMVNATDPDEGINGEVMYSFRNMESKASEIFQLDSQTGEVQV 304
Query: 304 RGPLDFEAIETYDIDIQATDGGGLSAHSKVLVEVVDVNDNPPEVMVSSVSSPLPEDSPPQ 363
RG LDFE Y+++IQ DGGGL + +L+ VVDVNDN PE+ ++S + + E+SPP
Sbjct: 305 RGSLDFEKYRFYEMEIQGQDGGGLFTTTTMLITVVDVNDNAPEITITSSINSILENSPPG 364
Query: 364 TVVALFTIRDRDIRVGGKVTCFLREDLPFVIKPTFGNSYSLVTDRSLDREEVSGYNITIV 423
TV+AL ++D+D G+V+CF+ LPF ++ T+GN Y L+T R LDRE V YNIT+
Sbjct: 365 TVIALLNVQDQDSGENGQVSCFIPNHLPFKLEKTYGNYYKLITSRVLDRELVQSYNITLT 424
Query: 424 AMDTGPPSLSAETMIEVLISDVNDNPPIFREDSYILTVRENNSPAVFIGKVHAEDLDLGE 483
A D G P LSAET + + ++D NDNPP+F SY + ENN I V A D D +
Sbjct: 425 ATDQGSPPLSAETHVWLNVADDNDNPPVFPHSSYSAYIPENNPRGASIFSVTALDPDSKQ 484
Query: 484 NAQITYSLLPPKNGDLSVFAYISINSGNGKLYALRTMDYEAIQDFQFVVKATDGGFLSLS 543
NA +TYSL + + +Y+SINS G LYAL++ DYE +D + V A D G LS
Sbjct: 485 NALVTYSLTDDTVQGVPLSSYVSINSNTGVLYALQSFDYEQFRDLELRVIARDSGDPPLS 544
Query: 544 SQVTVRVVVLDDNDNRPMILYPLQNGTLPCN-----DLVPRSAEAGYLVTKVVAVDGDSG 598
S V++ + VLD NDN P ILYP LP + +L PRSAE GYLVTKVVAVD DSG
Sbjct: 545 SNVSLSLFVLDQNDNAPEILYP----ALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSG 600
Query: 599 QNSWLSYHLLKATDLGLFSVQRQNGEIHTLRQISERDPMMQKLIILVQDHGQPALSTTVS 658
QN+WLSY LLKA++ GLF+V GE+ T R + +RD + Q L++ VQDHGQP LS TV+
Sbjct: 601 QNAWLSYRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVT 660
Query: 659 LNILLVDGFSEPYLQFQD-PTKHSRKVNPSTKYLVISLVILSFLFLLSVIVIFIIHVYQK 717
L + + D E + + + + + YLV+++ +S +FL+ VIV+ + +++
Sbjct: 661 LTVAVADSIPEVLADLGSLESLANSETSDLSLYLVVAVAAVSCIFLVFVIVLLALRLWRW 720
Query: 718 IKYR 721
K R
Sbjct: 721 HKSR 724
>gi|11056065 protocadherin gamma subfamily A, 6 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 592 bits (1525), Expect = e-169
Identities = 330/728 (45%), Positives = 446/728 (61%), Gaps = 12/728 (1%)
Query: 1 MAGTRRKSLQNRQVGSLLIFLCISVGDATTIRYSVAEEMESGSFVANVAKDLGLEVGKLA 60
MA +R ++ QV L + + A IRYS+ EE+E GSFV N+ KDLGLE +LA
Sbjct: 1 MAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELA 60
Query: 61 ARGARLVSEGNKMHFRLHRKTGDLFVKEKLDRESLCGKADPCVLHFEVVLVEPLQSFRAE 120
G R+VS G F L+ + G L ++DRE LC ++ C++ F +++ + L + E
Sbjct: 61 EHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVE 120
Query: 121 VRVFDINDNAPVFLNKEPLLKIPESTPLGSRFPLQSAQDLDVGLNGLQNYTLSANGYFHL 180
V + DINDN P FL +E +KI E+ SRFPL D DVG+N LQ + LS N +F +
Sbjct: 121 VEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSV 180
Query: 181 HTRFCSHGPKYAELVLNKPLDREEQPEVNLTITAVDGGSPPKSGTAHIHVVVLDVNDHVP 240
+ +HGPKY ELVL LDRE + L +TA+DGG P +S A I V VLDVND+ P
Sbjct: 181 DVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTP 240
Query: 241 QFSRLVYRAQVSENSPNGSLVATVTAVDLDEGTNKAITYSLAQNPEAILKTFQIDPQNGE 300
F++ VYR V EN P G+ V VTA D DEG + +TYS + E I + F ++ GE
Sbjct: 241 MFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGE 300
Query: 301 VRLRGPLDFEAIETYDIDIQATDGGGLSAHSKVLVEVVDVNDNPPEVMVSSVSSPLPEDS 360
+ LD+E Y++ ++A DG GL +KVL+ ++DVNDN PEV+V+S S + E +
Sbjct: 301 ISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESA 360
Query: 361 PPQTVVALFTIRDRDIRVGGKVTCFLREDLPFVIKPTFGNSYSLVTDRSLDREEVSGYNI 420
PP TV+ALF + DRD + G VTC + LPF ++ + GN Y LVT+ +LDREEV YNI
Sbjct: 361 PPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNI 420
Query: 421 TIVAMDTGPPSLSAETMIEVLISDVNDNPPIFREDSYILTVRENNSPAVFIGKVHAEDLD 480
T+ A D G P LS ET+I + ++D NDNPP F SY + V ENN I V+A D D
Sbjct: 421 TVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPD 480
Query: 481 LGENAQITYSLLPPKNGDLSVFAYISINSGNGKLYALRTMDYEAIQDFQFVVKATDGGFL 540
+ +NAQ++YSL + +Y+SINS G LYALR+ DYE ++D Q V A+D G
Sbjct: 481 VDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDP 540
Query: 541 SLSSQVTVRVVVLDDNDNRPMILYPLQNGTLPCN-----DLVPRSAEAGYLVTKVVAVDG 595
LSS V++ + VLD NDN P ILYP LP + +L PRSAE GYLVTKVVAVD
Sbjct: 541 PLSSNVSLSLFVLDQNDNAPEILYP----ALPTDGSTGVELAPRSAEPGYLVTKVVAVDR 596
Query: 596 DSGQNSWLSYHLLKATDLGLFSVQRQNGEIHTLRQISERDPMMQKLIILVQDHGQPALST 655
DSGQN+WLSY LLKA++ GLFSV GE+ T R + +RD + Q L++ VQDHGQP LS
Sbjct: 597 DSGQNAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSA 656
Query: 656 TVSLNILLVDGFSEPYLQFQDPTKHSRKVNPS--TKYLVISLVILSFLFLLSVIVIFIIH 713
TV+L + + D + L + S K N S T YLV+++ +S +FL VIV+ +
Sbjct: 657 TVTLTVAVADRIPD-ILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALR 715
Query: 714 VYQKIKYR 721
+ + K R
Sbjct: 716 LQRWHKSR 723
>gi|14196474 protocadherin gamma subfamily A, 6 isoform 2 precursor
[Homo sapiens]
Length = 818
Score = 592 bits (1525), Expect = e-169
Identities = 330/728 (45%), Positives = 446/728 (61%), Gaps = 12/728 (1%)
Query: 1 MAGTRRKSLQNRQVGSLLIFLCISVGDATTIRYSVAEEMESGSFVANVAKDLGLEVGKLA 60
MA +R ++ QV L + + A IRYS+ EE+E GSFV N+ KDLGLE +LA
Sbjct: 1 MAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELA 60
Query: 61 ARGARLVSEGNKMHFRLHRKTGDLFVKEKLDRESLCGKADPCVLHFEVVLVEPLQSFRAE 120
G R+VS G F L+ + G L ++DRE LC ++ C++ F +++ + L + E
Sbjct: 61 EHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVE 120
Query: 121 VRVFDINDNAPVFLNKEPLLKIPESTPLGSRFPLQSAQDLDVGLNGLQNYTLSANGYFHL 180
V + DINDN P FL +E +KI E+ SRFPL D DVG+N LQ + LS N +F +
Sbjct: 121 VEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSV 180
Query: 181 HTRFCSHGPKYAELVLNKPLDREEQPEVNLTITAVDGGSPPKSGTAHIHVVVLDVNDHVP 240
+ +HGPKY ELVL LDRE + L +TA+DGG P +S A I V VLDVND+ P
Sbjct: 181 DVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTP 240
Query: 241 QFSRLVYRAQVSENSPNGSLVATVTAVDLDEGTNKAITYSLAQNPEAILKTFQIDPQNGE 300
F++ VYR V EN P G+ V VTA D DEG + +TYS + E I + F ++ GE
Sbjct: 241 MFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGE 300
Query: 301 VRLRGPLDFEAIETYDIDIQATDGGGLSAHSKVLVEVVDVNDNPPEVMVSSVSSPLPEDS 360
+ LD+E Y++ ++A DG GL +KVL+ ++DVNDN PEV+V+S S + E +
Sbjct: 301 ISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESA 360
Query: 361 PPQTVVALFTIRDRDIRVGGKVTCFLREDLPFVIKPTFGNSYSLVTDRSLDREEVSGYNI 420
PP TV+ALF + DRD + G VTC + LPF ++ + GN Y LVT+ +LDREEV YNI
Sbjct: 361 PPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNI 420
Query: 421 TIVAMDTGPPSLSAETMIEVLISDVNDNPPIFREDSYILTVRENNSPAVFIGKVHAEDLD 480
T+ A D G P LS ET+I + ++D NDNPP F SY + V ENN I V+A D D
Sbjct: 421 TVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPD 480
Query: 481 LGENAQITYSLLPPKNGDLSVFAYISINSGNGKLYALRTMDYEAIQDFQFVVKATDGGFL 540
+ +NAQ++YSL + +Y+SINS G LYALR+ DYE ++D Q V A+D G
Sbjct: 481 VDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDP 540
Query: 541 SLSSQVTVRVVVLDDNDNRPMILYPLQNGTLPCN-----DLVPRSAEAGYLVTKVVAVDG 595
LSS V++ + VLD NDN P ILYP LP + +L PRSAE GYLVTKVVAVD
Sbjct: 541 PLSSNVSLSLFVLDQNDNAPEILYP----ALPTDGSTGVELAPRSAEPGYLVTKVVAVDR 596
Query: 596 DSGQNSWLSYHLLKATDLGLFSVQRQNGEIHTLRQISERDPMMQKLIILVQDHGQPALST 655
DSGQN+WLSY LLKA++ GLFSV GE+ T R + +RD + Q L++ VQDHGQP LS
Sbjct: 597 DSGQNAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSA 656
Query: 656 TVSLNILLVDGFSEPYLQFQDPTKHSRKVNPS--TKYLVISLVILSFLFLLSVIVIFIIH 713
TV+L + + D + L + S K N S T YLV+++ +S +FL VIV+ +
Sbjct: 657 TVTLTVAVADRIPD-ILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALR 715
Query: 714 VYQKIKYR 721
+ + K R
Sbjct: 716 LQRWHKSR 723
>gi|14196468 protocadherin gamma subfamily A, 4 isoform 2 precursor
[Homo sapiens]
Length = 820
Score = 588 bits (1517), Expect = e-168
Identities = 324/716 (45%), Positives = 450/716 (62%), Gaps = 17/716 (2%)
Query: 18 LIFLCISVGDATTIR-----YSVAEEMESGSFVANVAKDLGLEVGKLAARGARLVSEGNK 72
L+ +C+ +G IR YSV EE E GS V N+AKDLGL +LA RG R+VS G
Sbjct: 13 LLQICLLLGVLVEIRAEQILYSVFEEQEEGSVVGNIAKDLGLAPRELAERGVRIVSRGRT 72
Query: 73 MHFRLHRKTGDLFVKEKLDRESLCGKADPCVLHFEVVLVEPLQSFRAEVRVFDINDNAPV 132
F L+ ++G L ++DRE LC ++ CV + E++L + ++ R EV + D+NDN P
Sbjct: 73 QLFALNPRSGTLVTAGRIDREELCDRSPNCVTNLEILLEDTVKILRVEVEIIDVNDNPPS 132
Query: 133 FLNKEPLLKIPESTPLGSRFPLQSAQDLDVGLNGLQNYTLSANGYFHLHTRFCSHGPKYA 192
F ++ +K+ E+ G+RFPL A D DVG+N LQ Y L++NGYF L + + G KY
Sbjct: 133 FGTEQREIKVAENENPGARFPLPEAFDPDVGVNSLQGYQLNSNGYFSLDVQSGADGIKYP 192
Query: 193 ELVLNKPLDREEQPEVNLTITAVDGGSPPKSGTAHIHVVVLDVNDHVPQFSRLVYRAQVS 252
ELVL + LDREE+ +L +TA DGG P +SGTA I ++++D ND+ P F++ Y V
Sbjct: 193 ELVLERALDREEEAVHHLVLTAFDGGDPVRSGTARILIILVDTNDNAPVFTQPEYHVSVR 252
Query: 253 ENSPNGSLVATVTAVDLDEGTNKAITYSLAQNPEAILKTFQIDPQNGEVRLRGPLDFEAI 312
EN P G+ + TV A D DEG N +TYS + + I + FQ++ +G++ + G LD+E
Sbjct: 253 ENVPVGTRLLTVKATDPDEGANGDVTYSFRKVRDKISQLFQLNSLSGDITILGGLDYEDS 312
Query: 313 ETYDIDIQATDGGGLSAHSKVLVEVVDVNDNPPEVMVSSVSSPLPEDSPPQTVVALFTIR 372
YDID++A DG GL A SKVLV V+D NDN PEV V+S++S + E S P TV+ALF +
Sbjct: 313 GFYDIDVEAHDGPGLRARSKVLVTVLDENDNAPEVTVTSLTSSVQESSSPGTVIALFNVH 372
Query: 373 DRDIRVGGKVTCFLREDLPFVIKPTFGNSYSLVTDRSLDREEVSGYNITIVAMDTGPPSL 432
D D G VTC + ++LPF ++ T+GN Y L+T R+LDREEVS YNIT+ A D G P L
Sbjct: 373 DSDSGGNGLVTCSIPDNLPFTLEKTYGNYYRLLTHRTLDREEVSEYNITVTATDQGTPPL 432
Query: 433 SAETMIEVLISDVNDNPPIFREDSYILTVRENNSPAVFIGKVHAEDLDLGENAQITYSLL 492
S ET I + + D+NDNPP F SY + ENN I + A+D D G+NA+ITYSL
Sbjct: 433 STETHISLQVMDINDNPPTFPHASYSAYIPENNPRGASILSMTAQDPDSGDNARITYSLA 492
Query: 493 PPKNGDLSVFAYISINSGNGKLYALRTMDYEAIQDFQFVVKATDGGFLSLSSQVTVRVVV 552
+ +Y+SINS G LYAL + DYE +D Q ++ A+D G LSS V++ + V
Sbjct: 493 EDTFQGAPLSSYVSINSNTGILYALCSFDYEQFRDLQLLMTASDSGDPPLSSNVSLSLFV 552
Query: 553 LDDNDNRPMILYPLQNGTLPCN-----DLVPRSAEAGYLVTKVVAVDGDSGQNSWLSYHL 607
LD NDN P ILYP T P + +L PRSA++GYLVTKVVAVD DSGQN+WLSY L
Sbjct: 553 LDQNDNVPEILYP----TFPTDGSTGVELAPRSADSGYLVTKVVAVDRDSGQNAWLSYSL 608
Query: 608 LKATDLGLFSVQRQNGEIHTLRQISERDPMMQKLIILVQDHGQPALSTTVSLNILLVDGF 667
LK+++ GLF+V GE+ T R + +RD + Q+L+++VQDHGQP LS TV+L + + D
Sbjct: 609 LKSSEPGLFAVGLHTGEVRTARALLDRDALKQRLVVVVQDHGQPPLSATVTLTVAVADSI 668
Query: 668 SEPYLQFQDPTKHSRKVNPS--TKYLVISLVILSFLFLLSVIVIFIIHVYQKIKYR 721
+ L K S + S T YLV+++ +S +FL V V+ + + + K R
Sbjct: 669 PD-VLADLGSLKPSADPDDSGLTLYLVVAVAAVSCVFLAFVTVLLALKLRRWHKSR 723
>gi|11056026 protocadherin gamma subfamily A, 4 isoform 1 precursor
[Homo sapiens]
Length = 931
Score = 588 bits (1517), Expect = e-168
Identities = 324/716 (45%), Positives = 450/716 (62%), Gaps = 17/716 (2%)
Query: 18 LIFLCISVGDATTIR-----YSVAEEMESGSFVANVAKDLGLEVGKLAARGARLVSEGNK 72
L+ +C+ +G IR YSV EE E GS V N+AKDLGL +LA RG R+VS G
Sbjct: 13 LLQICLLLGVLVEIRAEQILYSVFEEQEEGSVVGNIAKDLGLAPRELAERGVRIVSRGRT 72
Query: 73 MHFRLHRKTGDLFVKEKLDRESLCGKADPCVLHFEVVLVEPLQSFRAEVRVFDINDNAPV 132
F L+ ++G L ++DRE LC ++ CV + E++L + ++ R EV + D+NDN P
Sbjct: 73 QLFALNPRSGTLVTAGRIDREELCDRSPNCVTNLEILLEDTVKILRVEVEIIDVNDNPPS 132
Query: 133 FLNKEPLLKIPESTPLGSRFPLQSAQDLDVGLNGLQNYTLSANGYFHLHTRFCSHGPKYA 192
F ++ +K+ E+ G+RFPL A D DVG+N LQ Y L++NGYF L + + G KY
Sbjct: 133 FGTEQREIKVAENENPGARFPLPEAFDPDVGVNSLQGYQLNSNGYFSLDVQSGADGIKYP 192
Query: 193 ELVLNKPLDREEQPEVNLTITAVDGGSPPKSGTAHIHVVVLDVNDHVPQFSRLVYRAQVS 252
ELVL + LDREE+ +L +TA DGG P +SGTA I ++++D ND+ P F++ Y V
Sbjct: 193 ELVLERALDREEEAVHHLVLTAFDGGDPVRSGTARILIILVDTNDNAPVFTQPEYHVSVR 252
Query: 253 ENSPNGSLVATVTAVDLDEGTNKAITYSLAQNPEAILKTFQIDPQNGEVRLRGPLDFEAI 312
EN P G+ + TV A D DEG N +TYS + + I + FQ++ +G++ + G LD+E
Sbjct: 253 ENVPVGTRLLTVKATDPDEGANGDVTYSFRKVRDKISQLFQLNSLSGDITILGGLDYEDS 312
Query: 313 ETYDIDIQATDGGGLSAHSKVLVEVVDVNDNPPEVMVSSVSSPLPEDSPPQTVVALFTIR 372
YDID++A DG GL A SKVLV V+D NDN PEV V+S++S + E S P TV+ALF +
Sbjct: 313 GFYDIDVEAHDGPGLRARSKVLVTVLDENDNAPEVTVTSLTSSVQESSSPGTVIALFNVH 372
Query: 373 DRDIRVGGKVTCFLREDLPFVIKPTFGNSYSLVTDRSLDREEVSGYNITIVAMDTGPPSL 432
D D G VTC + ++LPF ++ T+GN Y L+T R+LDREEVS YNIT+ A D G P L
Sbjct: 373 DSDSGGNGLVTCSIPDNLPFTLEKTYGNYYRLLTHRTLDREEVSEYNITVTATDQGTPPL 432
Query: 433 SAETMIEVLISDVNDNPPIFREDSYILTVRENNSPAVFIGKVHAEDLDLGENAQITYSLL 492
S ET I + + D+NDNPP F SY + ENN I + A+D D G+NA+ITYSL
Sbjct: 433 STETHISLQVMDINDNPPTFPHASYSAYIPENNPRGASILSMTAQDPDSGDNARITYSLA 492
Query: 493 PPKNGDLSVFAYISINSGNGKLYALRTMDYEAIQDFQFVVKATDGGFLSLSSQVTVRVVV 552
+ +Y+SINS G LYAL + DYE +D Q ++ A+D G LSS V++ + V
Sbjct: 493 EDTFQGAPLSSYVSINSNTGILYALCSFDYEQFRDLQLLMTASDSGDPPLSSNVSLSLFV 552
Query: 553 LDDNDNRPMILYPLQNGTLPCN-----DLVPRSAEAGYLVTKVVAVDGDSGQNSWLSYHL 607
LD NDN P ILYP T P + +L PRSA++GYLVTKVVAVD DSGQN+WLSY L
Sbjct: 553 LDQNDNVPEILYP----TFPTDGSTGVELAPRSADSGYLVTKVVAVDRDSGQNAWLSYSL 608
Query: 608 LKATDLGLFSVQRQNGEIHTLRQISERDPMMQKLIILVQDHGQPALSTTVSLNILLVDGF 667
LK+++ GLF+V GE+ T R + +RD + Q+L+++VQDHGQP LS TV+L + + D
Sbjct: 609 LKSSEPGLFAVGLHTGEVRTARALLDRDALKQRLVVVVQDHGQPPLSATVTLTVAVADSI 668
Query: 668 SEPYLQFQDPTKHSRKVNPS--TKYLVISLVILSFLFLLSVIVIFIIHVYQKIKYR 721
+ L K S + S T YLV+++ +S +FL V V+ + + + K R
Sbjct: 669 PD-VLADLGSLKPSADPDDSGLTLYLVVAVAAVSCVFLAFVTVLLALKLRRWHKSR 723
>gi|11128041 protocadherin gamma subfamily A, 10 isoform 1 precursor
[Homo sapiens]
Length = 936
Score = 583 bits (1502), Expect = e-166
Identities = 326/722 (45%), Positives = 442/722 (61%), Gaps = 20/722 (2%)
Query: 1 MAGTRRKSLQNRQVGSLLIFLCISVG-----DATTIRYSVAEEMESGSFVANVAKDLGLE 55
MA R +S +++ L++ LC+ G A I YS+ EE+E GSFV N++KDLGL
Sbjct: 1 MAAQRNRSKESKDCSGLVL-LCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLA 59
Query: 56 VGKLAARGARLVSEGNKMHFRLHRKTGDLFVKEKLDRESLCGKADPCVLHFEVVLVEPLQ 115
+LA RG R+VS G F L+ ++G L ++DRE LC ++ CV+ F +++ + ++
Sbjct: 60 PRELAERGVRIVSRGRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVK 119
Query: 116 SFRAEVRVFDINDNAPVFLNKEPLLKIPESTPLGSRFPLQSAQDLDVGLNGLQNYTLSAN 175
F E+ V DINDNAP F + +KI E+ G RFPL A D DVG+N LQ+Y LS N
Sbjct: 120 LFGIEIEVTDINDNAPKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPN 179
Query: 176 GYFHLHTRFCSHGPKYAELVLNKPLDREEQPEVNLTITAVDGGSPPKSGTAHIHVVVLDV 235
+F L + ++G KY ELVL LDREE+ +L +TA DGG P +SGT + V V D
Sbjct: 180 KHFSLRVQSRANGVKYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDA 239
Query: 236 NDHVPQFSRLVYRAQVSENSPNGSLVATVTAVDLDEGTNKAITYSLAQNPEAILKTFQID 295
ND+ P F+ YR V EN P G+ + TVTA D DEG N +TYS + P+ L FQ++
Sbjct: 240 NDNAPVFTLPEYRVSVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLN 299
Query: 296 PQNGEVRLRGPLDFEAIETYDIDIQATDGGGLSAHSKVLVEVVDVNDNPPEVMVSSVSSP 355
GE+++ LD+E Y+I+IQA DGG A +KVL+ V DVNDN PE+ ++S+ SP
Sbjct: 300 KYTGEIKISENLDYEETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSP 359
Query: 356 LPEDSPPQTVVALFTIRDRDIRVGGKVTCFLREDLPFVIKPTFGNSYSLVTDRSLDREEV 415
+ EDSP TVVAL + D D G+VTC + LPF ++ + + Y LV R+LDRE+V
Sbjct: 360 VTEDSPLGTVVALLNVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQV 419
Query: 416 SGYNITIVAMDTGPPSLSAETMIEVLISDVNDNPPIFREDSYILTVRENNSPAVFIGKVH 475
S YNIT+ A D G P LS E + ++D+NDNPP F + SY + ENN+ I V
Sbjct: 420 SSYNITVTATDGGSPPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVT 479
Query: 476 AEDLDLGENAQITYSLLPPKNGDLSVFAYISINSGNGKLYALRTMDYEAIQDFQFVVKAT 535
A D D ENAQI YSL + + +YISINS G LYALR+ DYE + Q V A+
Sbjct: 480 ALDPDSKENAQIIYSLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTAS 539
Query: 536 DGGFLSLSSQVTVRVVVLDDNDNRPMILYPLQNGTLPCN-----DLVPRSAEAGYLVTKV 590
D G LSS V++ + VLD NDN P ILYP LP + +L PRSAE GYLVTKV
Sbjct: 540 DSGDPPLSSNVSLSLFVLDQNDNAPEILYP----ALPTDGSTGVELAPRSAEPGYLVTKV 595
Query: 591 VAVDGDSGQNSWLSYHLLKATDLGLFSVQRQNGEIHTLRQISERDPMMQKLIILVQDHGQ 650
VAVD DSGQN+WLSY LLKA++ GLF+V GE+ T R + +RD + Q L++ VQDHGQ
Sbjct: 596 VAVDRDSGQNAWLSYRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQ 655
Query: 651 PALSTTVSLNILLVDGFSEPYL---QFQDPTKHSRKVNPSTKYLVISLVILSFLFLLSVI 707
P LS TV+L + + D + F+ P + + + T YLV+++ +S +FL VI
Sbjct: 656 PPLSATVTLTVAVADSIPQVLADLGSFESPA--NSETSDLTLYLVVAVAAVSCVFLAFVI 713
Query: 708 VI 709
V+
Sbjct: 714 VL 715
>gi|14196448 protocadherin gamma subfamily A, 10 isoform 2 precursor
[Homo sapiens]
Length = 850
Score = 583 bits (1502), Expect = e-166
Identities = 326/722 (45%), Positives = 442/722 (61%), Gaps = 20/722 (2%)
Query: 1 MAGTRRKSLQNRQVGSLLIFLCISVG-----DATTIRYSVAEEMESGSFVANVAKDLGLE 55
MA R +S +++ L++ LC+ G A I YS+ EE+E GSFV N++KDLGL
Sbjct: 1 MAAQRNRSKESKDCSGLVL-LCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLA 59
Query: 56 VGKLAARGARLVSEGNKMHFRLHRKTGDLFVKEKLDRESLCGKADPCVLHFEVVLVEPLQ 115
+LA RG R+VS G F L+ ++G L ++DRE LC ++ CV+ F +++ + ++
Sbjct: 60 PRELAERGVRIVSRGRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVK 119
Query: 116 SFRAEVRVFDINDNAPVFLNKEPLLKIPESTPLGSRFPLQSAQDLDVGLNGLQNYTLSAN 175
F E+ V DINDNAP F + +KI E+ G RFPL A D DVG+N LQ+Y LS N
Sbjct: 120 LFGIEIEVTDINDNAPKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPN 179
Query: 176 GYFHLHTRFCSHGPKYAELVLNKPLDREEQPEVNLTITAVDGGSPPKSGTAHIHVVVLDV 235
+F L + ++G KY ELVL LDREE+ +L +TA DGG P +SGT + V V D
Sbjct: 180 KHFSLRVQSRANGVKYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDA 239
Query: 236 NDHVPQFSRLVYRAQVSENSPNGSLVATVTAVDLDEGTNKAITYSLAQNPEAILKTFQID 295
ND+ P F+ YR V EN P G+ + TVTA D DEG N +TYS + P+ L FQ++
Sbjct: 240 NDNAPVFTLPEYRVSVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLN 299
Query: 296 PQNGEVRLRGPLDFEAIETYDIDIQATDGGGLSAHSKVLVEVVDVNDNPPEVMVSSVSSP 355
GE+++ LD+E Y+I+IQA DGG A +KVL+ V DVNDN PE+ ++S+ SP
Sbjct: 300 KYTGEIKISENLDYEETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSP 359
Query: 356 LPEDSPPQTVVALFTIRDRDIRVGGKVTCFLREDLPFVIKPTFGNSYSLVTDRSLDREEV 415
+ EDSP TVVAL + D D G+VTC + LPF ++ + + Y LV R+LDRE+V
Sbjct: 360 VTEDSPLGTVVALLNVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQV 419
Query: 416 SGYNITIVAMDTGPPSLSAETMIEVLISDVNDNPPIFREDSYILTVRENNSPAVFIGKVH 475
S YNIT+ A D G P LS E + ++D+NDNPP F + SY + ENN+ I V
Sbjct: 420 SSYNITVTATDGGSPPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVT 479
Query: 476 AEDLDLGENAQITYSLLPPKNGDLSVFAYISINSGNGKLYALRTMDYEAIQDFQFVVKAT 535
A D D ENAQI YSL + + +YISINS G LYALR+ DYE + Q V A+
Sbjct: 480 ALDPDSKENAQIIYSLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTAS 539
Query: 536 DGGFLSLSSQVTVRVVVLDDNDNRPMILYPLQNGTLPCN-----DLVPRSAEAGYLVTKV 590
D G LSS V++ + VLD NDN P ILYP LP + +L PRSAE GYLVTKV
Sbjct: 540 DSGDPPLSSNVSLSLFVLDQNDNAPEILYP----ALPTDGSTGVELAPRSAEPGYLVTKV 595
Query: 591 VAVDGDSGQNSWLSYHLLKATDLGLFSVQRQNGEIHTLRQISERDPMMQKLIILVQDHGQ 650
VAVD DSGQN+WLSY LLKA++ GLF+V GE+ T R + +RD + Q L++ VQDHGQ
Sbjct: 596 VAVDRDSGQNAWLSYRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQ 655
Query: 651 PALSTTVSLNILLVDGFSEPYL---QFQDPTKHSRKVNPSTKYLVISLVILSFLFLLSVI 707
P LS TV+L + + D + F+ P + + + T YLV+++ +S +FL VI
Sbjct: 656 PPLSATVTLTVAVADSIPQVLADLGSFESPA--NSETSDLTLYLVVAVAAVSCVFLAFVI 713
Query: 708 VI 709
V+
Sbjct: 714 VL 715
>gi|14270502 protocadherin gamma subfamily B, 6 isoform 2 precursor
[Homo sapiens]
Length = 820
Score = 582 bits (1500), Expect = e-166
Identities = 325/791 (41%), Positives = 469/791 (59%), Gaps = 14/791 (1%)
Query: 31 IRYSVAEEMESGSFVANVAKDLGLEVGKLAARGARLVSEGNKMHFRLHRKTGDLFVKEKL 90
IRYS+ EE+ GS V N+AKDLGL V ++AR R+ +E K+HF + ++GDL VK ++
Sbjct: 33 IRYSIPEELAKGSVVGNLAKDLGLSVLDVSARKLRVSAE--KLHFSVDAESGDLLVKNRI 90
Query: 91 DRESLCGKADPCVLHFEVVLVEPLQSFRAEVRVFDINDNAPVFLNKEPLLKIPESTPLGS 150
DRE +C + C L E V+ PL F V + D+ND+AP F KE L+I ES G+
Sbjct: 91 DREQICKERRRCELQLEAVVENPLNIFHVIVVIEDVNDHAPQFDKKEIHLEIFESASAGT 150
Query: 151 RFPLQSAQDLDVGLNGLQNYTLSANGYFHLHTRFCSHGPKYAELVLNKPLDREEQPEVNL 210
R L A D D+ +N +++Y +++N YF L R S G KY EL L K LDREEQ +L
Sbjct: 151 RLSLDPATDPDININSIKDYKINSNPYFSLMVRVNSDGGKYPELSLEKLLDREEQRSHSL 210
Query: 211 TITAVDGGSPPKSGTAHIHVVVLDVNDHVPQFSRLVYRAQVSENSPNGSLVATVTAVDLD 270
+TA+DGG PP+S TAHI + V D ND+ P FSR YR +SEN P GS V VTA D D
Sbjct: 211 ILTALDGGDPPRSATAHIEISVKDTNDNPPVFSRDEYRISLSENLPPGSPVLQVTATDQD 270
Query: 271 EGTNKAITYSLAQNPEAILKTFQIDPQNGEVRLRGPLDFEAIETYDIDIQATDGGGLSAH 330
EG N I Y ++ F +D + G ++ DFE +E Y ++++A DGGGLS
Sbjct: 271 EGVNAEINYYFRSTAQSTKHMFSLDEKTGMIKNNQSFDFEDVERYTMEVEAKDGGGLSTQ 330
Query: 331 SKVLVEVVDVNDNPPEVMVSSVSSPLPEDSPPQTVVALFTIRDRDIRVGGKVTCFLREDL 390
KV++E++D NDN PE++++S+S + E+SPP VVALF RD D G+V C + D+
Sbjct: 331 CKVIIEILDENDNSPEIIITSLSDQILENSPPGMVVALFKTRDLDFGGNGEVRCNIETDI 390
Query: 391 PFVIKPTFGNSYSLVTDRSLDREEVSGYNITIVAMDTGPPSLSAETMIEVLISDVNDNPP 450
PF I + N Y LVTD +LDRE+ YN+TIVA D G P LS+ I + ++D+NDN P
Sbjct: 391 PFKIYSSSNNYYKLVTDGALDREQTPEYNVTIVATDRGKPPLSSSRSITLYVADINDNAP 450
Query: 451 IFREDSYILTVRENNSPAVFIGKVHAEDLDLGENAQITYSLLPPKNGDLSVFAYISINSG 510
+F + SY++ V ENN P I +V A D DLG N I+YS++ L+V +Y+S+++
Sbjct: 451 VFDQTSYVVHVAENNPPGASIAQVSASDPDLGLNGHISYSIVASDLEPLAVSSYVSVSAQ 510
Query: 511 NGKLYALRTMDYEAIQDFQFVVKATDGGFLSLSSQVTVRVVVLDDNDNRPMILYP-LQNG 569
+G ++A R D+E ++ F ++A D G +LS+ V++RV+V D NDN P +LYP L
Sbjct: 511 SGVVFAQRAFDHEQLRAFALTLQARDHGSPTLSANVSLRVLVGDRNDNAPRVLYPALGPD 570
Query: 570 TLPCNDLVPRSAEAGYLVTKVVAVDGDSGQNSWLSYHLLKATDLGLFSVQRQNGEIHTLR 629
D+VPRSAE GYLVTKVVAVD DSG N+WLSYH+L+A++ GLFS+ + GE+ T R
Sbjct: 571 GSAFFDMVPRSAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEPGLFSLGLRTGEVRTAR 630
Query: 630 QISERDPMMQKLIILVQDHGQPALSTTVSLNILLVDGFSEPYLQFQDPTKHSRKVNPSTK 689
+ +RD Q+L++ V+D GQP LS T +L+++ D E D S
Sbjct: 631 ALGDRDAARQRLLVAVRDGGQPPLSATATLHLVFADNLQEILPDLSDRPVLSDPQAELQF 690
Query: 690 YLVISLVILSFLFLLSVIVIFIIHVYQKIKYREKFTIQEHFYDDCNFSNNLVQGQGNGSL 749
YLV++L ++S LFLL+VI+ + + + + + F+ + V
Sbjct: 691 YLVVALALISVLFLLAVILAIALRLRRSLSP----ATWDCFHPGLCVKSGPVVPPNYSEG 746
Query: 750 SRPCPYEMCSATGTGNSEFRFLKRFMPNFPFPHATGEI--KMEAGSSLPPNSDRNKSQRL 807
+ P Y +C A TG EF FLK +P H+ ++ + G+ +PP+ + +
Sbjct: 747 TLPYSYNLCIA-HTGTKEFNFLKCSVP----LHSNEDMVCSVSPGALIPPHGGEDLTSHP 801
Query: 808 EGHDQVSDDYM 818
E VS ++
Sbjct: 802 ETLTSVSFSFL 812
>gi|11128035 protocadherin gamma subfamily B, 2 isoform 1 precursor
[Homo sapiens]
Length = 931
Score = 580 bits (1496), Expect = e-165
Identities = 325/748 (43%), Positives = 452/748 (60%), Gaps = 19/748 (2%)
Query: 31 IRYSVAEEMESGSFVANVAKDLGLEVGKLAARGARLVSEGNKMHFRLHRKTGDLFVKEKL 90
IRYS+ EE+ S V N+AKDLGL V L AR R+ +E K +F ++ ++GDL V +++
Sbjct: 33 IRYSIPEELAKNSVVGNLAKDLGLSVRDLPARKLRVSAE--KEYFTVNPESGDLLVSDRI 90
Query: 91 DRESLCGKADPCVLHFEVVLVEPLQSFRAEVRVFDINDNAPVFLNKEPLLKIPESTPLGS 150
DRE +CGK CVL F+ V PL F V V DINDN P+F + LKI EST G+
Sbjct: 91 DREQICGKQPLCVLDFDTVAENPLNIFYIAVIVQDINDNTPLFKQTKINLKIGESTKPGT 150
Query: 151 RFPLQSAQDLDVGLNGLQNYTLSANGYFHLHTRFCSHGPKYAELVLNKPLDREEQPEVNL 210
FPL A D DVG N LQ Y L+ N YF L + G KY EL+L LDREE L
Sbjct: 151 TFPLDPALDSDVGPNSLQRYHLNDNEYFDLAEKQTPDGRKYPELILKHSLDREEHSLHQL 210
Query: 211 TITAVDGGSPPKSGTAHIHVVVLDVNDHVPQFSRLVYRAQVSENSPNGSLVATVTAVDLD 270
+TAVDGG PP+SGT I + V D ND+ P FS+ VYR + E+ P G V VTA D D
Sbjct: 211 VLTAVDGGDPPQSGTTQIRIKVTDANDNPPVFSQDVYRVTLREDVPPGFFVLQVTATDRD 270
Query: 271 EGTNKAITYSLAQNPEAILKTFQIDPQNGEVRLRGPLDFEAIETYDIDIQATDGGGLSAH 330
EG N ITYS E + F ++ + GE+ + LDFE +Y + I+A D G L+AH
Sbjct: 271 EGINAEITYSFHNVDEQVKHFFNLNEKTGEITTKDDLDFEIASSYTLSIEAKDPGDLAAH 330
Query: 331 SKVLVEVVDVNDNPPEVMVSSVSSPLPEDSPPQTVVALFTIRDRDIRVGGKVTCFLREDL 390
+ VE++D ND PEV+V+SVS+PLPEDSPP TV+AL RDRD G+V C + +
Sbjct: 331 CSIQVEILDDNDCAPEVIVTSVSTPLPEDSPPGTVIALIKTRDRDSGENGEVYCQVLGNA 390
Query: 391 PFVIKPTFGNSYSLVTDRSLDREEVSGYNITIVAMDTGPPSLSAETMIEVLISDVNDNPP 450
F++K + N Y LVTD +LDREE+ YN+TI A D G P LS+ ++ + ISDVNDN P
Sbjct: 391 KFILKSSSKNYYKLVTDGALDREEIPEYNLTITATDGGKPPLSSSIIVTLHISDVNDNAP 450
Query: 451 IFREDSYILTVRENNSPAVFIGKVHAEDLDLGENAQITYSLLPPKNGDLSVFAYISINSG 510
+F++ SY++ V ENN P I ++ A D DLG + Q++YS++ + +Y+S+++
Sbjct: 451 VFQQTSYMVHVAENNPPGASIAQISASDPDLGPSGQVSYSIVASDLKPREILSYVSVSAQ 510
Query: 511 NGKLYALRTMDYEAIQDFQFVVKATDGGFLSLSSQVTVRVVVLDDNDNRPMILYP-LQNG 569
+G ++A R D+E ++ F+ ++A D G +LS+ V++RV+V D NDN P +LYP L
Sbjct: 511 SGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVGDLNDNAPRVLYPALGPD 570
Query: 570 TLPCNDLVPRSAEAGYLVTKVVAVDGDSGQNSWLSYHLLKATDLGLFSVQRQNGEIHTLR 629
D+VPR+AE GYLVTKVVAVD DSG N+WLSYH+L+A++ GLFS+ + GE+ T R
Sbjct: 571 GSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEPGLFSLGLRTGEVRTAR 630
Query: 630 QISERDPMMQKLIILVQDHGQPALSTTVSLNILLVDGFSEPYLQFQDPTKHSRKVNPSTK 689
+ +RD Q+L++ V+D GQP LS T +L+++ D E D + S
Sbjct: 631 ALGDRDAARQRLLVAVRDGGQPPLSATATLHLIFADSLQEVLPDLSDRREPSDPQAKLQF 690
Query: 690 YLVISLVILSFLFLLSVIVIFIIHVYQKIKYREKFTIQEHFYDDCNFSNNLVQGQGNGSL 749
YLV++L ++S LF L+VI+ I R + + + + DC F L G G L
Sbjct: 691 YLVVALALISVLFFLAVIL--------AISLRLRLSSRSDAW-DC-FQPGLSSKPGPGVL 740
Query: 750 ------SRPCPYEMCSATGTGNSEFRFL 771
+ P Y +C A+ + +EF FL
Sbjct: 741 PNYSEGTLPYSYNLCVASQSAKTEFNFL 768
>gi|11128029 protocadherin gamma subfamily B, 6 isoform 1 precursor
[Homo sapiens]
Length = 930
Score = 580 bits (1496), Expect = e-165
Identities = 323/781 (41%), Positives = 465/781 (59%), Gaps = 14/781 (1%)
Query: 31 IRYSVAEEMESGSFVANVAKDLGLEVGKLAARGARLVSEGNKMHFRLHRKTGDLFVKEKL 90
IRYS+ EE+ GS V N+AKDLGL V ++AR R+ +E K+HF + ++GDL VK ++
Sbjct: 33 IRYSIPEELAKGSVVGNLAKDLGLSVLDVSARKLRVSAE--KLHFSVDAESGDLLVKNRI 90
Query: 91 DRESLCGKADPCVLHFEVVLVEPLQSFRAEVRVFDINDNAPVFLNKEPLLKIPESTPLGS 150
DRE +C + C L E V+ PL F V + D+ND+AP F KE L+I ES G+
Sbjct: 91 DREQICKERRRCELQLEAVVENPLNIFHVIVVIEDVNDHAPQFDKKEIHLEIFESASAGT 150
Query: 151 RFPLQSAQDLDVGLNGLQNYTLSANGYFHLHTRFCSHGPKYAELVLNKPLDREEQPEVNL 210
R L A D D+ +N +++Y +++N YF L R S G KY EL L K LDREEQ +L
Sbjct: 151 RLSLDPATDPDININSIKDYKINSNPYFSLMVRVNSDGGKYPELSLEKLLDREEQRSHSL 210
Query: 211 TITAVDGGSPPKSGTAHIHVVVLDVNDHVPQFSRLVYRAQVSENSPNGSLVATVTAVDLD 270
+TA+DGG PP+S TAHI + V D ND+ P FSR YR +SEN P GS V VTA D D
Sbjct: 211 ILTALDGGDPPRSATAHIEISVKDTNDNPPVFSRDEYRISLSENLPPGSPVLQVTATDQD 270
Query: 271 EGTNKAITYSLAQNPEAILKTFQIDPQNGEVRLRGPLDFEAIETYDIDIQATDGGGLSAH 330
EG N I Y ++ F +D + G ++ DFE +E Y ++++A DGGGLS
Sbjct: 271 EGVNAEINYYFRSTAQSTKHMFSLDEKTGMIKNNQSFDFEDVERYTMEVEAKDGGGLSTQ 330
Query: 331 SKVLVEVVDVNDNPPEVMVSSVSSPLPEDSPPQTVVALFTIRDRDIRVGGKVTCFLREDL 390
KV++E++D NDN PE++++S+S + E+SPP VVALF RD D G+V C + D+
Sbjct: 331 CKVIIEILDENDNSPEIIITSLSDQILENSPPGMVVALFKTRDLDFGGNGEVRCNIETDI 390
Query: 391 PFVIKPTFGNSYSLVTDRSLDREEVSGYNITIVAMDTGPPSLSAETMIEVLISDVNDNPP 450
PF I + N Y LVTD +LDRE+ YN+TIVA D G P LS+ I + ++D+NDN P
Sbjct: 391 PFKIYSSSNNYYKLVTDGALDREQTPEYNVTIVATDRGKPPLSSSRSITLYVADINDNAP 450
Query: 451 IFREDSYILTVRENNSPAVFIGKVHAEDLDLGENAQITYSLLPPKNGDLSVFAYISINSG 510
+F + SY++ V ENN P I +V A D DLG N I+YS++ L+V +Y+S+++
Sbjct: 451 VFDQTSYVVHVAENNPPGASIAQVSASDPDLGLNGHISYSIVASDLEPLAVSSYVSVSAQ 510
Query: 511 NGKLYALRTMDYEAIQDFQFVVKATDGGFLSLSSQVTVRVVVLDDNDNRPMILYP-LQNG 569
+G ++A R D+E ++ F ++A D G +LS+ V++RV+V D NDN P +LYP L
Sbjct: 511 SGVVFAQRAFDHEQLRAFALTLQARDHGSPTLSANVSLRVLVGDRNDNAPRVLYPALGPD 570
Query: 570 TLPCNDLVPRSAEAGYLVTKVVAVDGDSGQNSWLSYHLLKATDLGLFSVQRQNGEIHTLR 629
D+VPRSAE GYLVTKVVAVD DSG N+WLSYH+L+A++ GLFS+ + GE+ T R
Sbjct: 571 GSAFFDMVPRSAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEPGLFSLGLRTGEVRTAR 630
Query: 630 QISERDPMMQKLIILVQDHGQPALSTTVSLNILLVDGFSEPYLQFQDPTKHSRKVNPSTK 689
+ +RD Q+L++ V+D GQP LS T +L+++ D E D S
Sbjct: 631 ALGDRDAARQRLLVAVRDGGQPPLSATATLHLVFADNLQEILPDLSDRPVLSDPQAELQF 690
Query: 690 YLVISLVILSFLFLLSVIVIFIIHVYQKIKYREKFTIQEHFYDDCNFSNNLVQGQGNGSL 749
YLV++L ++S LFLL+VI+ + + + + + F+ + V
Sbjct: 691 YLVVALALISVLFLLAVILAIALRLRRSLSP----ATWDCFHPGLCVKSGPVVPPNYSEG 746
Query: 750 SRPCPYEMCSATGTGNSEFRFLKRFMPNFPFPHATGEI--KMEAGSSLPPNSDRNKSQRL 807
+ P Y +C A TG EF FLK +P H+ ++ + G+ +PP+ + +
Sbjct: 747 TLPYSYNLCIA-HTGTKEFNFLKCSVP----LHSNEDMVCSVSPGALIPPHGGEDLTSHP 801
Query: 808 E 808
E
Sbjct: 802 E 802
>gi|11056063 protocadherin gamma subfamily A, 7 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 580 bits (1496), Expect = e-165
Identities = 318/696 (45%), Positives = 435/696 (62%), Gaps = 2/696 (0%)
Query: 28 ATTIRYSVAEEMESGSFVANVAKDLGLEVGKLAARGARLVSEGNKMHFRLHRKTGDLFVK 87
A I YSV+EE + GSFV ++AKDLGLE +LA RG R++S G F L++++G L
Sbjct: 28 AGRILYSVSEETDKGSFVGDIAKDLGLEPRELAERGVRIISRGRTQLFALNQRSGSLVTA 87
Query: 88 EKLDRESLCGKADPCVLHFEVVLVEPLQSFRAEVRVFDINDNAPVFLNKEPLLKIPESTP 147
++DRE +C ++ C+++F +++ + + + +V + DINDN P FL +E +KI E+T
Sbjct: 88 GRIDREEICAQSARCLVNFNILMEDKMNLYPIDVEIIDINDNVPRFLTEEINVKIMENTA 147
Query: 148 LGSRFPLQSAQDLDVGLNGLQNYTLSANGYFHLHTRFCSHGPKYAELVLNKPLDREEQPE 207
G RFPL A D DVG N LQ+Y LS N +F L + KY ELVL + LDREE+
Sbjct: 148 PGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSGDDETKYPELVLERVLDREEERV 207
Query: 208 VNLTITAVDGGSPPKSGTAHIHVVVLDVNDHVPQFSRLVYRAQVSENSPNGSLVATVTAV 267
+L +TA DGG PP+S TAHI V V+DVNDH P FS Y+ V EN P G+ + TV A+
Sbjct: 208 HHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLPQYQVTVPENVPVGTRLLTVHAI 267
Query: 268 DLDEGTNKAITYSLAQNPEAILKTFQIDPQNGEVRLRGPLDFEAIETYDIDIQATDGGGL 327
DLDEG N +TYS + + K F ++ GE+ LD+E Y++++QA DG G
Sbjct: 268 DLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEISTLEGLDYEETAFYEMEVQAQDGPGS 327
Query: 328 SAHSKVLVEVVDVNDNPPEVMVSSVSSPLPEDSPPQTVVALFTIRDRDIRVGGKVTCFLR 387
+KVL+ V+DVNDN PEV ++S+SS +PED+P TV+ALF ++DRD G+VTC +
Sbjct: 328 LTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTVIALFYLQDRDSGKNGEVTCTIP 387
Query: 388 EDLPFVIKPTFGNSYSLVTDRSLDREEVSGYNITIVAMDTGPPSLSAETMIEVLISDVND 447
E+LPF ++ + N Y LVT ++LDRE +S YNIT+ A D G P LS ET I + ++D ND
Sbjct: 388 ENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGGTPPLSRETHIFMQVADTND 447
Query: 448 NPPIFREDSYILTVRENNSPAVFIGKVHAEDLDLGENAQITYSLLPPKNGDLSVFAYISI 507
NPP F SY + + ENN I V A+D D +NAQITYSL V +Y+SI
Sbjct: 448 NPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQITYSLAEDTIQGAPVSSYVSI 507
Query: 508 NSGNGKLYALRTMDYEAIQDFQFVVKATDGGFLSLSSQVTVRVVVLDDNDNRPMILYP-L 566
NS G LYAL++ DYE +++ Q V A D G LSS +++ + VLD NDN P ILYP L
Sbjct: 508 NSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPLSSNMSLSLFVLDQNDNPPEILYPAL 567
Query: 567 QNGTLPCNDLVPRSAEAGYLVTKVVAVDGDSGQNSWLSYHLLKATDLGLFSVQRQNGEIH 626
+L PRSAE GYLVTKVVAVD DSGQN+WLSY LLKA++ GLF+V GE+
Sbjct: 568 PTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLLLKASEPGLFAVGLYTGEVR 627
Query: 627 TLRQISERDPMMQKLIILVQDHGQPALSTTVSLNILLVDGFSEPYLQFQDPTKHSRKVN- 685
T R + +RD + Q L++ VQDHGQP LS TV+L + + D E N
Sbjct: 628 TARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVLADLGSLEPSDGPYNY 687
Query: 686 PSTKYLVISLVILSFLFLLSVIVIFIIHVYQKIKYR 721
T YLV+++ +S +FL V+V+ + + + K R
Sbjct: 688 DLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKSR 723
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.136 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,381,664
Number of Sequences: 37866
Number of extensions: 1446952
Number of successful extensions: 9949
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 191
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 3213
Number of HSP's gapped (non-prelim): 685
length of query: 818
length of database: 18,247,518
effective HSP length: 111
effective length of query: 707
effective length of database: 14,044,392
effective search space: 9929385144
effective search space used: 9929385144
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.