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Search of human proteins with 9966905
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|9966905 lysozyme-like 6 [Homo sapiens]
(148 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|9966905 lysozyme-like 6 [Homo sapiens] 316 5e-87
gi|118498373 sperm acrosome associated 5 [Homo sapiens] 149 1e-36
gi|120952755 sperm acrosome associated 5B [Homo sapiens] 149 1e-36
gi|27777653 sperm acrosome associated 3 [Homo sapiens] 139 1e-33
gi|73390143 lysozyme-like 1 [Homo sapiens] 125 1e-29
gi|4557894 lysozyme precursor [Homo sapiens] 124 2e-29
gi|73088987 lysozyme-like 2 [Homo sapiens] 123 5e-29
gi|21389465 lysozyme-like 4 [Homo sapiens] 120 5e-28
gi|4504947 lactalbumin, alpha- precursor [Homo sapiens] 76 1e-14
gi|166795238 calcyphosine 2 [Homo sapiens] 28 3.7
gi|38045915 pregnancy-associated plasma protein A preproprotein ... 27 4.8
gi|5174473 intracisternal A particle-promoted polypeptide isofor... 27 8.2
gi|8923946 neutral sphingomyelin phosphodiesterase 3 [Homo sapiens] 27 8.2
gi|223890235 intracisternal A particle-promoted polypeptide isof... 27 8.2
gi|42794779 myosin 18A isoform b [Homo sapiens] 27 8.2
gi|28416946 myosin 18A isoform a [Homo sapiens] 27 8.2
>gi|9966905 lysozyme-like 6 [Homo sapiens]
Length = 148
Score = 316 bits (809), Expect = 5e-87
Identities = 148/148 (100%), Positives = 148/148 (100%)
Query: 1 MTKALLIYLVSSFLALNQASLISRCDLAQVLQLEDLDGFEGYSLSDWLCLAFVESKFNIS 60
MTKALLIYLVSSFLALNQASLISRCDLAQVLQLEDLDGFEGYSLSDWLCLAFVESKFNIS
Sbjct: 1 MTKALLIYLVSSFLALNQASLISRCDLAQVLQLEDLDGFEGYSLSDWLCLAFVESKFNIS 60
Query: 61 KINENADGSFDYGLFQINSHYWCNDYKSYSENLCHVDCQDLLNPNLLAGIHCAKRIVSGA 120
KINENADGSFDYGLFQINSHYWCNDYKSYSENLCHVDCQDLLNPNLLAGIHCAKRIVSGA
Sbjct: 61 KINENADGSFDYGLFQINSHYWCNDYKSYSENLCHVDCQDLLNPNLLAGIHCAKRIVSGA 120
Query: 121 RGMNNWVEWRLHCSGRPLFYWLTGCRLR 148
RGMNNWVEWRLHCSGRPLFYWLTGCRLR
Sbjct: 121 RGMNNWVEWRLHCSGRPLFYWLTGCRLR 148
>gi|118498373 sperm acrosome associated 5 [Homo sapiens]
Length = 159
Score = 149 bits (375), Expect = 1e-36
Identities = 63/141 (44%), Positives = 95/141 (67%)
Query: 5 LLIYLVSSFLALNQASLISRCDLAQVLQLEDLDGFEGYSLSDWLCLAFVESKFNISKINE 64
+++ L + + A + RC+LA L+ L+G++GY + DWLC+A ES F+ + ++
Sbjct: 7 VVVTLATLMVVTVDAKIYERCELAARLERAGLNGYKGYGVGDWLCMAHYESGFDTAFVDH 66
Query: 65 NADGSFDYGLFQINSHYWCNDYKSYSENLCHVDCQDLLNPNLLAGIHCAKRIVSGARGMN 124
N DGS +YG+FQ+NS +WC++ + ++NLCH+DC DLLN ++L I CAK+IVS G++
Sbjct: 67 NPDGSSEYGIFQLNSAWWCDNGITPTKNLCHMDCHDLLNRHILDDIRCAKQIVSSQNGLS 126
Query: 125 NWVEWRLHCSGRPLFYWLTGC 145
W WRLHCSG L WL GC
Sbjct: 127 AWTSWRLHCSGHDLSEWLKGC 147
>gi|120952755 sperm acrosome associated 5B [Homo sapiens]
Length = 159
Score = 149 bits (375), Expect = 1e-36
Identities = 63/141 (44%), Positives = 95/141 (67%)
Query: 5 LLIYLVSSFLALNQASLISRCDLAQVLQLEDLDGFEGYSLSDWLCLAFVESKFNISKINE 64
+++ L + + A + RC+LA L+ L+G++GY + DWLC+A ES F+ + ++
Sbjct: 7 VVVTLATLMVVTVDAKIYERCELAARLERAGLNGYKGYGVGDWLCMAHYESGFDTAFVDH 66
Query: 65 NADGSFDYGLFQINSHYWCNDYKSYSENLCHVDCQDLLNPNLLAGIHCAKRIVSGARGMN 124
N DGS +YG+FQ+NS +WC++ + ++NLCH+DC DLLN ++L I CAK+IVS G++
Sbjct: 67 NPDGSSEYGIFQLNSAWWCDNGITPTKNLCHMDCHDLLNRHILDDIRCAKQIVSSQNGLS 126
Query: 125 NWVEWRLHCSGRPLFYWLTGC 145
W WRLHCSG L WL GC
Sbjct: 127 AWTSWRLHCSGHDLSEWLKGC 147
>gi|27777653 sperm acrosome associated 3 [Homo sapiens]
Length = 215
Score = 139 bits (349), Expect = 1e-33
Identities = 63/140 (45%), Positives = 88/140 (62%)
Query: 6 LIYLVSSFLALNQASLISRCDLAQVLQLEDLDGFEGYSLSDWLCLAFVESKFNISKINEN 65
L+ L+S L ++A L RC+LA+VL LDG+ GYSL+DW+CLA+ S FN + ++
Sbjct: 74 LVCLLSCLLPSSEAKLYGRCELARVLHDFGLDGYRGYSLADWVCLAYFTSGFNAAALDYE 133
Query: 66 ADGSFDYGLFQINSHYWCNDYKSYSENLCHVDCQDLLNPNLLAGIHCAKRIVSGARGMNN 125
ADGS + G+FQINS WC++ N+C + C DLLNPNL + CA +I +G+
Sbjct: 134 ADGSTNNGIFQINSRRWCSNLTPNVPNVCRMYCSDLLNPNLKDTVICAMKITQEPQGLGY 193
Query: 126 WVEWRLHCSGRPLFYWLTGC 145
W WR HC G+ L W+ GC
Sbjct: 194 WEAWRHHCQGKDLTEWVDGC 213
>gi|73390143 lysozyme-like 1 [Homo sapiens]
Length = 194
Score = 125 bits (315), Expect = 1e-29
Identities = 57/147 (38%), Positives = 83/147 (56%)
Query: 1 MTKALLIYLVSSFLALNQASLISRCDLAQVLQLEDLDGFEGYSLSDWLCLAFVESKFNIS 60
M A ++ L+ + ++ + +RC LA++ LD + G+SL +W+C+A+ ES +N +
Sbjct: 47 MKAAGILTLIGCLVTGAESKIYTRCKLAKIFSRAGLDNYWGFSLGNWICMAYYESGYNTT 106
Query: 61 KINENADGSFDYGLFQINSHYWCNDYKSYSENLCHVDCQDLLNPNLLAGIHCAKRIVSGA 120
DGS DYG+FQINS WC K N CHV C L+ +L I CA++IV
Sbjct: 107 AQTVLDDGSIDYGIFQINSFAWCRRGKLKENNHCHVACSALITDDLTDAIICARKIVKET 166
Query: 121 RGMNNWVEWRLHCSGRPLFYWLTGCRL 147
+GMN W W+ HC GR L W GC +
Sbjct: 167 QGMNYWQGWKKHCEGRDLSEWKKGCEV 193
>gi|4557894 lysozyme precursor [Homo sapiens]
Length = 148
Score = 124 bits (312), Expect = 2e-29
Identities = 61/145 (42%), Positives = 85/145 (58%), Gaps = 2/145 (1%)
Query: 3 KALLIYLVSSFLALNQASLISRCDLAQVLQLEDLDGFEGYSLSDWLCLAFVESKFNISKI 62
KAL++ + Q + RC+LA+ L+ +DG+ G SL++W+CLA ES +N
Sbjct: 2 KALIVLGLVLLSVTVQGKVFERCELARTLKRLGMDGYRGISLANWMCLAKWESGYNTRAT 61
Query: 63 NENA-DGSFDYGLFQINSHYWCNDYKSYSE-NLCHVDCQDLLNPNLLAGIHCAKRIVSGA 120
N NA D S DYG+FQINS YWCND K+ N CH+ C LL N+ + CAKR+V
Sbjct: 62 NYNAGDRSTDYGIFQINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDP 121
Query: 121 RGMNNWVEWRLHCSGRPLFYWLTGC 145
+G+ WV WR C R + ++ GC
Sbjct: 122 QGIRAWVAWRNRCQNRDVRQYVQGC 146
>gi|73088987 lysozyme-like 2 [Homo sapiens]
Length = 194
Score = 123 bits (309), Expect = 5e-29
Identities = 57/147 (38%), Positives = 82/147 (55%)
Query: 1 MTKALLIYLVSSFLALNQASLISRCDLAQVLQLEDLDGFEGYSLSDWLCLAFVESKFNIS 60
M A ++ L+ + ++ + +RC LA++ LD + G+SL +W+C+A+ ES +N +
Sbjct: 47 MKAAGILTLIGCLVTGAESKIYTRCKLAKIFSRAGLDNYWGFSLGNWICMAYYESGYNTT 106
Query: 61 KINENADGSFDYGLFQINSHYWCNDYKSYSENLCHVDCQDLLNPNLLAGIHCAKRIVSGA 120
DGS DYG+FQINS WC K N CHV C L+ +L I CAK+IV
Sbjct: 107 AQTVLDDGSIDYGIFQINSFAWCRRGKLKENNHCHVACSALVTDDLTDAIICAKKIVKET 166
Query: 121 RGMNNWVEWRLHCSGRPLFYWLTGCRL 147
+GMN W W+ HC GR L W C +
Sbjct: 167 QGMNYWQGWKKHCEGRDLSDWKKDCEV 193
>gi|21389465 lysozyme-like 4 [Homo sapiens]
Length = 146
Score = 120 bits (300), Expect = 5e-28
Identities = 63/149 (42%), Positives = 84/149 (56%), Gaps = 5/149 (3%)
Query: 1 MTKALLIYLVSSFLALNQASLISRCDLAQVLQLEDLDGFEGYSLSDWLCLAFVESKFNIS 60
M ++++ L+ + + A ++ RC +A+ L LD FEGYSL +W+CLA+ ESKFN
Sbjct: 1 MKASVVLSLLGYLVVPSGAYILGRCTVAKKLHDGGLDYFEGYSLENWVCLAYFESKFNPM 60
Query: 61 KINENA-DGSFDYGLFQINSHYWCNDYKSYSENLCHVDCQDLLNPNLLAGIHCAKRIVSG 119
I EN +G +GLFQ+ WC D + N CH+ C LLNPNL I CAK IV G
Sbjct: 61 AIYENTREGYTGFGLFQMRGSDWCGD---HGRNRCHMSCSALLNPNLEKTIKCAKTIVKG 117
Query: 120 ARGMNNWVEWRLHCS-GRPLFYWLTGCRL 147
GM W W +C L WL GC+L
Sbjct: 118 KEGMGAWPTWSRYCQYSDTLARWLDGCKL 146
>gi|4504947 lactalbumin, alpha- precursor [Homo sapiens]
Length = 142
Score = 75.9 bits (185), Expect = 1e-14
Identities = 43/137 (31%), Positives = 77/137 (56%), Gaps = 6/137 (4%)
Query: 7 IYLVSSFLALNQASLISRCDLAQVLQLEDLDGFEGYSLSDWLCLAFVESKFNISKINENA 66
++LV A ++C+L+Q+L+ D+DG+ G +L + +C F S ++ I EN
Sbjct: 7 LFLVGILFPAILAKQFTKCELSQLLK--DIDGYGGIALPELICTMFHTSGYDTQAIVENN 64
Query: 67 DGSFDYGLFQINSHYWCNDYK-SYSENLCHVDCQDLLNPNLLAGIHCAKRIVSGARGMNN 125
+ S +YGLFQI++ WC + S N+C + C L+ ++ I CAK+I+ +G++
Sbjct: 65 E-STEYGLFQISNKLWCKSSQVPQSRNICDISCDKFLDDDITDDIMCAKKILD-IKGIDY 122
Query: 126 WVEWRLHCSGRPLFYWL 142
W+ + C+ + L WL
Sbjct: 123 WLAHKALCTEK-LEQWL 138
>gi|166795238 calcyphosine 2 [Homo sapiens]
Length = 557
Score = 27.7 bits (60), Expect = 3.7
Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 13/70 (18%)
Query: 21 LISRCDLAQVLQLEDLDGFEGYSLSDWLCLAFVESKFNISKINENADGSFDYGLFQINSH 80
L+ + D Q L++ L+ E S WL L N+N +G DYG F+
Sbjct: 464 LLDKADFKQALKVFHLEVSEKDFESAWLIL------------NDNGNGKVDYGEFKRGII 511
Query: 81 YWCNDY-KSY 89
N+Y KSY
Sbjct: 512 GEMNEYRKSY 521
>gi|38045915 pregnancy-associated plasma protein A preproprotein
[Homo sapiens]
Length = 1627
Score = 27.3 bits (59), Expect = 4.8
Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 4/29 (13%)
Query: 84 NDYKSYSENLCHVDCQDLLNPNLLAGIHC 112
N++ SY+++ DC D PN +A +HC
Sbjct: 633 NNFMSYADD----DCTDSFTPNQVARMHC 657
>gi|5174473 intracisternal A particle-promoted polypeptide isoform 1
[Homo sapiens]
Length = 584
Score = 26.6 bits (57), Expect = 8.2
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 73 GLFQINSHYWCNDYKSYSENLCHV 96
G+FQ + C+D +SEN HV
Sbjct: 141 GIFQFSEQIACHDLLEFSENYIHV 164
>gi|8923946 neutral sphingomyelin phosphodiesterase 3 [Homo sapiens]
Length = 655
Score = 26.6 bits (57), Expect = 8.2
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 46 DWLCLAFVESKFNISKINENADGSFDYGLFQINSHYWCNDYKSY 89
D+LCL V K +K+ E G F+Y L+ + Y C S+
Sbjct: 358 DFLCLQEVFDKRAATKLKEQLHGYFEYILYDVGV-YGCQGCCSF 400
>gi|223890235 intracisternal A particle-promoted polypeptide isoform
2 [Homo sapiens]
Length = 582
Score = 26.6 bits (57), Expect = 8.2
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 73 GLFQINSHYWCNDYKSYSENLCHV 96
G+FQ + C+D +SEN HV
Sbjct: 141 GIFQFSEQIACHDLLEFSENYIHV 164
>gi|42794779 myosin 18A isoform b [Homo sapiens]
Length = 2039
Score = 26.6 bits (57), Expect = 8.2
Identities = 9/29 (31%), Positives = 17/29 (58%)
Query: 110 IHCAKRIVSGARGMNNWVEWRLHCSGRPL 138
I C ++ + +G+ +W W+L + RPL
Sbjct: 1218 IRCVQKNIKKNKGVKDWPWWKLFTTVRPL 1246
>gi|28416946 myosin 18A isoform a [Homo sapiens]
Length = 2054
Score = 26.6 bits (57), Expect = 8.2
Identities = 9/29 (31%), Positives = 17/29 (58%)
Query: 110 IHCAKRIVSGARGMNNWVEWRLHCSGRPL 138
I C ++ + +G+ +W W+L + RPL
Sbjct: 1218 IRCVQKNIKKNKGVKDWPWWKLFTTVRPL 1246
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.325 0.139 0.463
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,528,164
Number of Sequences: 37866
Number of extensions: 227165
Number of successful extensions: 555
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 536
Number of HSP's gapped (non-prelim): 16
length of query: 148
length of database: 18,247,518
effective HSP length: 93
effective length of query: 55
effective length of database: 14,725,980
effective search space: 809928900
effective search space used: 809928900
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.