Guide to the Human Genome
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Name: NRF1 Sequence: fasta or formatted (503aa) NCBI GI: 93141039
Description:

nuclear respiratory factor 1

Referenced in:

Mitochondria

Other entries for this name:
alt mRNA [503aa] nuclear respiratory factor 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            13.9         70           5
 C cysteine            0.6          3           1
 D aspartate           4.2         21           2
 E glutamate           7.0         35           2
 F phenylalanine       1.2          6           1
 G glycine             5.8         29           3
 H histidine           2.4         12           1
 I isoleucine          3.6         18           1
 K lysine              3.4         17           2
 L leucine             6.6         33           2
 M methionine          2.6         13           1
 N asparagine          2.6         13           1
 P proline             5.0         25           2
 Q glutamine           8.2         41           2
 R arginine            3.4         17           1
 S serine              7.0         35           2
 T threonine           9.7         49           2
 V valine             10.1         51           2
 W tryptophan          1.2          6           2
 Y tyrosine            1.8          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nuclear respiratory factor 1 
NRF1                  1.000   nuclear respiratory factor 1 
LOC729792             0.017   PREDICTED: hypothetical protein 
LOC729792             0.017   PREDICTED: hypothetical protein 
LOC729792             0.017   PREDICTED: hypothetical protein 
LOC100294249          0.017   PREDICTED: hypothetical protein XP_002344067 
LOC100294238          0.017   PREDICTED: hypothetical protein 
LOC100294204          0.017   PREDICTED: hypothetical protein 
LOC100294136          0.017   PREDICTED: hypothetical protein 
LOC100294091          0.017   PREDICTED: hypothetical protein 
LOC730401             0.017   PREDICTED: hypothetical protein 
LOC100294501          0.015   PREDICTED: hypothetical protein 
MUC17                 0.015   mucin 17 
HCFC1                 0.010   host cell factor 1 
LOC727962             0.009   PREDICTED: similar to collagen, type I, alpha 2 [Ho...
LOC653203             0.008   PREDICTED: hypothetical protein 
EHBP1L1               0.008   tangerin 
REPS1                 0.008   RALBP1 associated Eps domain containing 1 isoform a...
REPS1                 0.008   RALBP1 associated Eps domain containing 1 isoform b...
AKD1                  0.007   adenylate kinase domain containing 1 isoform 1 [Hom...
AKD1                  0.007   adenylate kinase domain containing 1 isoform 2 [Homo...
NAB1                  0.007   NGFI-A binding protein 1 
CCT8L2                0.007   T-complex protein 1 
GAB3                  0.007   Gab3 protein isoform 2 
HOMER2                0.007   homer 2 isoform 4 
ADC                   0.007   ODC antizyme inhibitor-2 
GMEB1                 0.007   glucocorticoid modulatory element binding protein 1 ...
GMEB1                 0.007   glucocorticoid modulatory element binding protein 1 ...
FAM71B                0.006   family with sequence similarity 71, member B 
GBX2                  0.006   gastrulation brain homeo box 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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