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Search of human proteins with 9256618
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|9256618 protocadherin beta 6 precursor [Homo sapiens]
(794 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|9256618 protocadherin beta 6 precursor [Homo sapiens] 1563 0.0
gi|7661662 protocadherin beta 5 precursor [Homo sapiens] 1218 0.0
gi|9256614 protocadherin beta 3 precursor [Homo sapiens] 1207 0.0
gi|9256616 protocadherin beta 4 precursor [Homo sapiens] 1204 0.0
gi|9256612 protocadherin beta 2 precursor [Homo sapiens] 1183 0.0
gi|9256610 protocadherin beta 15 precursor [Homo sapiens] 1183 0.0
gi|14195605 protocadherin beta 16 precursor [Homo sapiens] 1179 0.0
gi|9256608 protocadherin beta 14 precursor [Homo sapiens] 1166 0.0
gi|11036654 protocadherin beta 13 precursor [Homo sapiens] 1152 0.0
gi|11276081 protocadherin beta 8 precursor [Homo sapiens] 1148 0.0
gi|14195616 protocadherin beta 9 precursor [Homo sapiens] 1135 0.0
gi|9256604 protocadherin beta 11 precursor [Homo sapiens] 1117 0.0
gi|9256602 protocadherin beta 10 precursor [Homo sapiens] 1114 0.0
gi|9256606 protocadherin beta 12 precursor [Homo sapiens] 1113 0.0
gi|11036656 protocadherin beta 7 precursor [Homo sapiens] 1102 0.0
gi|14195607 protocadherin beta 1 precursor [Homo sapiens] 769 0.0
gi|11056032 protocadherin gamma subfamily A, 1 isoform 1 precurs... 647 0.0
gi|14196459 protocadherin gamma subfamily A, 1 isoform 2 precurs... 647 0.0
gi|11056030 protocadherin gamma subfamily A, 2 isoform 1 precurs... 639 0.0
gi|14196462 protocadherin gamma subfamily A, 2 isoform 2 precurs... 639 0.0
gi|11128043 protocadherin gamma subfamily A, 9 isoform 1 precurs... 630 e-180
gi|14270487 protocadherin gamma subfamily A, 9 isoform 2 precurs... 630 e-180
gi|14589880 protocadherin gamma subfamily A, 3 isoform 1 precurs... 626 e-179
gi|14196465 protocadherin gamma subfamily A, 3 isoform 2 precurs... 626 e-179
gi|11128041 protocadherin gamma subfamily A, 10 isoform 1 precur... 624 e-178
gi|14196448 protocadherin gamma subfamily A, 10 isoform 2 precur... 624 e-178
gi|11056065 protocadherin gamma subfamily A, 6 isoform 1 precurs... 623 e-178
gi|14196474 protocadherin gamma subfamily A, 6 isoform 2 precurs... 623 e-178
gi|11056063 protocadherin gamma subfamily A, 7 isoform 1 precurs... 622 e-178
gi|14196477 protocadherin gamma subfamily A, 7 isoform 2 precurs... 622 e-178
>gi|9256618 protocadherin beta 6 precursor [Homo sapiens]
Length = 794
Score = 1563 bits (4046), Expect = 0.0
Identities = 794/794 (100%), Positives = 794/794 (100%)
Query: 1 MMQTKVQNKKRQVAFFILLMLWGEVGSESIQYSVLEETESGTFVANLTKDLGLRVGELAS 60
MMQTKVQNKKRQVAFFILLMLWGEVGSESIQYSVLEETESGTFVANLTKDLGLRVGELAS
Sbjct: 1 MMQTKVQNKKRQVAFFILLMLWGEVGSESIQYSVLEETESGTFVANLTKDLGLRVGELAS 60
Query: 61 RGARVVFKGNRQHLQFDPQTHDLLLNEKLDREELCGSTEPCVLPFQVLLENPLQFFQASL 120
RGARVVFKGNRQHLQFDPQTHDLLLNEKLDREELCGSTEPCVLPFQVLLENPLQFFQASL
Sbjct: 61 RGARVVFKGNRQHLQFDPQTHDLLLNEKLDREELCGSTEPCVLPFQVLLENPLQFFQASL 120
Query: 121 RVRDINDHAPEFPAREMLLKISEITMPGKIFPLKMAHDLDTGSNGLQRYTISSNPHFHVL 180
RVRDINDHAPEFPAREMLLKISEITMPGKIFPLKMAHDLDTGSNGLQRYTISSNPHFHVL
Sbjct: 121 RVRDINDHAPEFPAREMLLKISEITMPGKIFPLKMAHDLDTGSNGLQRYTISSNPHFHVL 180
Query: 181 TRNRSEGRKFPELVLDKPLDREEQPQLRLTLIALDGGSPPRSGTSEIQIQVLDINDNVPE 240
TRNRSEGRKFPELVLDKPLDREEQPQLRLTLIALDGGSPPRSGTSEIQIQVLDINDNVPE
Sbjct: 181 TRNRSEGRKFPELVLDKPLDREEQPQLRLTLIALDGGSPPRSGTSEIQIQVLDINDNVPE 240
Query: 241 FAQELYEAQVPENNPLGSLVITVSARDLDAGSFGKVSYALFQVDDVNQPFEINAITGEIR 300
FAQELYEAQVPENNPLGSLVITVSARDLDAGSFGKVSYALFQVDDVNQPFEINAITGEIR
Sbjct: 241 FAQELYEAQVPENNPLGSLVITVSARDLDAGSFGKVSYALFQVDDVNQPFEINAITGEIR 300
Query: 301 LRKALDFEEIQSYDVDVEATDGGGLSGKCSLVVRVLDVNDNAPELTMSFFISLIPENLPE 360
LRKALDFEEIQSYDVDVEATDGGGLSGKCSLVVRVLDVNDNAPELTMSFFISLIPENLPE
Sbjct: 301 LRKALDFEEIQSYDVDVEATDGGGLSGKCSLVVRVLDVNDNAPELTMSFFISLIPENLPE 360
Query: 361 ITVAVFSVSDADSGHNQQVICSIENNLPFLLRPSVENFYTLVTEGALDRESRAEYNITIT 420
ITVAVFSVSDADSGHNQQVICSIENNLPFLLRPSVENFYTLVTEGALDRESRAEYNITIT
Sbjct: 361 ITVAVFSVSDADSGHNQQVICSIENNLPFLLRPSVENFYTLVTEGALDRESRAEYNITIT 420
Query: 421 VTDLGTPRLKTQQSITVQVSDVNDNVPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGI 480
VTDLGTPRLKTQQSITVQVSDVNDNVPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGI
Sbjct: 421 VTDLGTPRLKTQQSITVQVSDVNDNVPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGI 480
Query: 481 NAQVTYSLLPPQDPHLPLSSLVSINADNGHLFALRSLDYEALQSFEFRVGATDRGSPALS 540
NAQVTYSLLPPQDPHLPLSSLVSINADNGHLFALRSLDYEALQSFEFRVGATDRGSPALS
Sbjct: 481 NAQVTYSLLPPQDPHLPLSSLVSINADNGHLFALRSLDYEALQSFEFRVGATDRGSPALS 540
Query: 541 SEALVRLLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWL 600
SEALVRLLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWL
Sbjct: 541 SEALVRLLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWL 600
Query: 601 SYQLLKATELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLL 660
SYQLLKATELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLL
Sbjct: 601 SYQLLKATELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLL 660
Query: 661 VDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASV 720
VDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASV
Sbjct: 661 VDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASV 720
Query: 721 GRYSVPEGPFPGHLVDVSGTGTLSQSYQYKVCLTGGSETNEFKFLKPIMPNFPPQGTERE 780
GRYSVPEGPFPGHLVDVSGTGTLSQSYQYKVCLTGGSETNEFKFLKPIMPNFPPQGTERE
Sbjct: 721 GRYSVPEGPFPGHLVDVSGTGTLSQSYQYKVCLTGGSETNEFKFLKPIMPNFPPQGTERE 780
Query: 781 MEETPTSRNSFPFS 794
MEETPTSRNSFPFS
Sbjct: 781 MEETPTSRNSFPFS 794
>gi|7661662 protocadherin beta 5 precursor [Homo sapiens]
Length = 795
Score = 1218 bits (3151), Expect = 0.0
Identities = 614/783 (78%), Positives = 684/783 (87%)
Query: 9 KKRQVAFFILLMLWGEVGSESIQYSVLEETESGTFVANLTKDLGLRVGELASRGARVVFK 68
+KRQV F +L+L E GSE+++YS+ EETESG VANL KDLGL VGELA+RGAR+ +K
Sbjct: 10 QKRQVMFLAILLLLWEAGSEAVRYSIPEETESGYSVANLAKDLGLGVGELATRGARMHYK 69
Query: 69 GNRQHLQFDPQTHDLLLNEKLDREELCGSTEPCVLPFQVLLENPLQFFQASLRVRDINDH 128
GN++ LQ D +T +LLL EKLDRE +CG+TEPC+L FQ+LLENP+QFFQ L++ DINDH
Sbjct: 70 GNKELLQLDIKTGNLLLYEKLDREVMCGATEPCILHFQLLLENPVQFFQTDLQLTDINDH 129
Query: 129 APEFPAREMLLKISEITMPGKIFPLKMAHDLDTGSNGLQRYTISSNPHFHVLTRNRSEGR 188
APEFP +EMLLKI E T PG +FPLK+A D D GSN +Q YTIS N HFHV T NR +GR
Sbjct: 130 APEFPEKEMLLKIPESTQPGTVFPLKIAQDFDIGSNTVQNYTISPNSHFHVATHNRGDGR 189
Query: 189 KFPELVLDKPLDREEQPQLRLTLIALDGGSPPRSGTSEIQIQVLDINDNVPEFAQELYEA 248
K+PELVLDK LDREE+P+L LTL ALDGG+PPRSGT+ I+I VLD NDN PEF Q YE
Sbjct: 190 KYPELVLDKALDREERPELSLTLTALDGGAPPRSGTTTIRIVVLDNNDNAPEFLQSFYEV 249
Query: 249 QVPENNPLGSLVITVSARDLDAGSFGKVSYALFQVDDVNQPFEINAITGEIRLRKALDFE 308
QVPEN+PL SLV+ VSARDLDAG++G V+YALFQ D+V QPF I+ T EIRL++ALDFE
Sbjct: 250 QVPENSPLNSLVVVVSARDLDAGAYGSVAYALFQGDEVTQPFVIDEKTAEIRLKRALDFE 309
Query: 309 EIQSYDVDVEATDGGGLSGKCSLVVRVLDVNDNAPELTMSFFISLIPENLPEITVAVFSV 368
Y+V++ ATDGGGLSGKC++ + V+DVNDNAPELTMS S PEN PE VAVFSV
Sbjct: 310 ATPYYNVEIVATDGGGLSGKCTVAIEVVDVNDNAPELTMSTLSSPTPENAPETVVAVFSV 369
Query: 369 SDADSGHNQQVICSIENNLPFLLRPSVENFYTLVTEGALDRESRAEYNITITVTDLGTPR 428
SD DSG N ++ICSI+N+LPFLL+P+++NFYTLVT+ LDRES+AEYNITITVTD+GTPR
Sbjct: 370 SDPDSGDNGRMICSIQNDLPFLLKPTLKNFYTLVTQRTLDRESQAEYNITITVTDMGTPR 429
Query: 429 LKTQQSITVQVSDVNDNVPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGINAQVTYSL 488
LKT+ +ITV VSDVNDN PAFTQTSYTLFVRENNSPALHIGSVSATDRDSG NAQVTYSL
Sbjct: 430 LKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSL 489
Query: 489 LPPQDPHLPLSSLVSINADNGHLFALRSLDYEALQSFEFRVGATDRGSPALSSEALVRLL 548
LPPQ+PHL L+SLVSINADNGHLFALRSLDYEALQ+FEFRVGATDRGSPALSSEALVR+L
Sbjct: 490 LPPQNPHLRLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSSEALVRVL 549
Query: 549 VLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKAT 608
VLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKAT
Sbjct: 550 VLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKAT 609
Query: 609 ELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQPY 668
E GLF +WAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQPY
Sbjct: 610 EPGLFSMWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQPY 669
Query: 669 LPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRYSVPEG 728
LPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGR SVPEG
Sbjct: 670 LPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRCSVPEG 729
Query: 729 PFPGHLVDVSGTGTLSQSYQYKVCLTGGSETNEFKFLKPIMPNFPPQGTEREMEETPTSR 788
PFPGHLVDVSGTGTLSQSY Y+VCLTG S EFKFLKPI+PN PQG E+ +T R
Sbjct: 730 PFPGHLVDVSGTGTLSQSYHYEVCLTGDSGAGEFKFLKPIIPNLLPQGAGEEIGKTAAFR 789
Query: 789 NSF 791
NSF
Sbjct: 790 NSF 792
>gi|9256614 protocadherin beta 3 precursor [Homo sapiens]
Length = 796
Score = 1207 bits (3124), Expect = 0.0
Identities = 614/787 (78%), Positives = 677/787 (86%), Gaps = 1/787 (0%)
Query: 9 KKRQVAFFILLMLWGEVGSESIQYSVLEETESGTFVANLTKDLGLRVGELASRGARVVFK 68
++RQV + + GSES +YSV EE E G +ANL KDLGLRV ELA+RGA+VV K
Sbjct: 10 RQRQVLLLFVFLGGSLAGSESRRYSVAEEKEKGFLIANLAKDLGLRVEELAARGAQVVSK 69
Query: 69 GNRQHLQFDPQTHDLLLNEKLDREELCGSTEPCVLPFQVLLENPLQFFQASLRVRDINDH 128
GN+QH Q QT DLLLNEKLDREELCG TEPC+L FQ+LL+NPLQF LR+ D+NDH
Sbjct: 70 GNKQHFQLSHQTGDLLLNEKLDREELCGPTEPCILHFQILLQNPLQFVTNELRIIDVNDH 129
Query: 129 APEFPAREMLLKISEITMPGKIFPLKMAHDLDTGSNGLQRYTISSNPHFHVLTRNRSEGR 188
+P F EM LKI E T+PG + PL A DLD G N LQ YTI+ N HFHVLTR+R +GR
Sbjct: 130 SPVFFENEMHLKILESTLPGTVIPLGNAEDLDVGRNSLQNYTITPNSHFHVLTRSRRDGR 189
Query: 189 KFPELVLDKPLDREEQPQLRLTLIALDGGSPPRSGTSEIQIQVLDINDNVPEFAQELYEA 248
K+PELVLDK LDREEQP+L LTL ALDGGSPPRSGT++I IQVLDINDN PEFAQ LYE
Sbjct: 190 KYPELVLDKALDREEQPELSLTLTALDGGSPPRSGTAQINIQVLDINDNAPEFAQPLYEV 249
Query: 249 QVPENNPLGSLVITVSARDLDAGSFGKVSYALFQV-DDVNQPFEINAITGEIRLRKALDF 307
V EN P+ S+++TVSA DLD GSFG +SYA F +++ + F++N ITG+++L K L+F
Sbjct: 250 AVLENTPVNSVIVTVSASDLDTGSFGTISYAFFHASEEIRKTFQLNPITGDMQLVKYLNF 309
Query: 308 EEIQSYDVDVEATDGGGLSGKCSLVVRVLDVNDNAPELTMSFFISLIPENLPEITVAVFS 367
E I SY+VD+EA DGGGLSGK +++V+V+DVNDN PELT+S S IPEN E +AVFS
Sbjct: 310 EAINSYEVDIEAKDGGGLSGKSTVIVQVVDVNDNPPELTLSSVNSPIPENSGETVLAVFS 369
Query: 368 VSDADSGHNQQVICSIENNLPFLLRPSVENFYTLVTEGALDRESRAEYNITITVTDLGTP 427
VSD DSG N +V+CSIENNLPF L+PSVENFYTLV+EGALDRE+R+EYNITIT+TDLGTP
Sbjct: 370 VSDLDSGDNGRVMCSIENNLPFFLKPSVENFYTLVSEGALDRETRSEYNITITITDLGTP 429
Query: 428 RLKTQQSITVQVSDVNDNVPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGINAQVTYS 487
RLKT+ +ITV VSDVNDN PAFTQ SYTLFVRENNSPALHIGSVSATDRDSG NAQVTYS
Sbjct: 430 RLKTKYNITVLVSDVNDNAPAFTQISYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYS 489
Query: 488 LLPPQDPHLPLSSLVSINADNGHLFALRSLDYEALQSFEFRVGATDRGSPALSSEALVRL 547
LLPPQDPHLPLSSLVSINADNGHLFALRSLDYEALQ+FEFRVGATDRGSPALSSEALVR+
Sbjct: 490 LLPPQDPHLPLSSLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSSEALVRV 549
Query: 548 LVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA 607
LVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA
Sbjct: 550 LVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA 609
Query: 608 TELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQP 667
TE GLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQP
Sbjct: 610 TEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQP 669
Query: 668 YLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRYSVPE 727
YLPLPEAAPAQAQAD LTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGR SVPE
Sbjct: 670 YLPLPEAAPAQAQADLLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRCSVPE 729
Query: 728 GPFPGHLVDVSGTGTLSQSYQYKVCLTGGSETNEFKFLKPIMPNFPPQGTEREMEETPTS 787
GPFPG +VDVSGTGTLSQSYQY+VCLTGGS TNEFKFLKPI+PNF QG ER E P+
Sbjct: 730 GPFPGQMVDVSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNFVAQGAERVSEANPSF 789
Query: 788 RNSFPFS 794
R SF FS
Sbjct: 790 RKSFEFS 796
>gi|9256616 protocadherin beta 4 precursor [Homo sapiens]
Length = 795
Score = 1204 bits (3116), Expect = 0.0
Identities = 610/785 (77%), Positives = 677/785 (86%), Gaps = 1/785 (0%)
Query: 11 RQVAFFILLMLWGEVGSESIQYSVLEETESGTFVANLTKDLGLRVGELASRGARVVFKGN 70
RQV FIL++ +V E I+YSVLEETESG+FVA+L KDLGL +GELASR ARV+ +
Sbjct: 11 RQVLAFILMVFLSQVRLEPIRYSVLEETESGSFVAHLAKDLGLGIGELASRSARVLSDDD 70
Query: 71 RQHLQFDPQTHDLLLNEKLDREELCGSTEPCVLPFQVLLENPLQFFQASLRVRDINDHAP 130
+Q LQ D QT DLLL EKLDREELCG EPCVL FQV LE P+QFFQ L ++DINDH+P
Sbjct: 71 KQRLQLDRQTGDLLLREKLDREELCGPIEPCVLHFQVFLEMPVQFFQGELLIQDINDHSP 130
Query: 131 EFPAREMLLKISEITMPGKIFPLKMAHDLDTGSNGLQRYTISSNPHFHVLTRNRSEGRKF 190
FP RE+LLKI E + PG +FPL +A DLD GSNGLQ+YTIS N HFH+LTRN SEG+K+
Sbjct: 131 IFPEREVLLKILENSQPGTLFPLLIAEDLDVGSNGLQKYTISPNSHFHILTRNHSEGKKY 190
Query: 191 PELVLDKPLDREEQPQLRLTLIALDGGSPPRSGTSEIQIQVLDINDNVPEFAQELYEAQV 250
P+LV DKPLDREEQP+ LTL+ALDGGSPPRSGT ++I ++DINDN PEF Y QV
Sbjct: 191 PDLVQDKPLDREEQPEFSLTLVALDGGSPPRSGTVMVRILIMDINDNAPEFVHTPYGVQV 250
Query: 251 PENNPLGSLVITVSARDLDAGSFGKVSYALFQV-DDVNQPFEINAITGEIRLRKALDFEE 309
EN+PL S ++ V ARD+DAG+FG VSY LFQ D++ Q F IN +TGEI L+K LDFE+
Sbjct: 251 LENSPLDSPIVRVLARDIDAGNFGSVSYGLFQASDEIKQTFSINEVTGEILLKKKLDFEK 310
Query: 310 IQSYDVDVEATDGGGLSGKCSLVVRVLDVNDNAPELTMSFFISLIPENLPEITVAVFSVS 369
I+SY V++EATDGGGLSGK ++V+ V+DVNDN PEL +S S IPEN PE V++F +
Sbjct: 311 IKSYHVEIEATDGGGLSGKGTVVIEVVDVNDNPPELIISSLTSSIPENAPETVVSIFRIR 370
Query: 370 DADSGHNQQVICSIENNLPFLLRPSVENFYTLVTEGALDRESRAEYNITITVTDLGTPRL 429
D DSG N ++ICSI +NLPF+L+P+++NFYTLVTE LDRE+ AEYNITI VTDLGTPRL
Sbjct: 371 DRDSGENGKMICSIPDNLPFILKPTLKNFYTLVTERPLDRETSAEYNITIAVTDLGTPRL 430
Query: 430 KTQQSITVQVSDVNDNVPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGINAQVTYSLL 489
KTQQ+ITVQVSDVNDN PAFTQTSYTLFVRENNSPALHIGSVSATDRDSG NAQVTYSLL
Sbjct: 431 KTQQNITVQVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLL 490
Query: 490 PPQDPHLPLSSLVSINADNGHLFALRSLDYEALQSFEFRVGATDRGSPALSSEALVRLLV 549
PPQDPHLPL+SLVSINADNGHLFALRSLDYEALQ+FEFRVGA+DRGSPALSSEALVR+LV
Sbjct: 491 PPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGASDRGSPALSSEALVRVLV 550
Query: 550 LDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATE 609
LD NDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATE
Sbjct: 551 LDTNDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATE 610
Query: 610 LGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQPYL 669
GLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQPYL
Sbjct: 611 PGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQPYL 670
Query: 670 PLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRYSVPEGP 729
PLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGR SVPEGP
Sbjct: 671 PLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRCSVPEGP 730
Query: 730 FPGHLVDVSGTGTLSQSYQYKVCLTGGSETNEFKFLKPIMPNFPPQGTEREMEETPTSRN 789
FPGHLVDVSGTGTLSQSYQY+VCLTG S T EFKFLKPI PN Q T RE++E P RN
Sbjct: 731 FPGHLVDVSGTGTLSQSYQYEVCLTGDSGTGEFKFLKPIFPNLLVQDTGREVKENPKFRN 790
Query: 790 SFPFS 794
S FS
Sbjct: 791 SLVFS 795
>gi|9256612 protocadherin beta 2 precursor [Homo sapiens]
Length = 798
Score = 1183 bits (3060), Expect = 0.0
Identities = 600/787 (76%), Positives = 677/787 (86%), Gaps = 1/787 (0%)
Query: 9 KKRQVAFFILLMLWGEVGSESIQYSVLEETESGTFVANLTKDLGLRVGELASRGARVVFK 68
K+RQV F +L+ + + YSV EETESG+FVANL KDLGL +GELA RGARVV K
Sbjct: 12 KQRQVLIFFVLLGIAQASCQPRHYSVAEETESGSFVANLLKDLGLEIGELAVRGARVVSK 71
Query: 69 GNRQHLQFDPQTHDLLLNEKLDREELCGSTEPCVLPFQVLLENPLQFFQASLRVRDINDH 128
G + HLQFD QT DLLLNEKLDREELCG TEPCVLPFQVLLENPLQFFQA LR+RD+NDH
Sbjct: 72 GKKMHLQFDRQTGDLLLNEKLDREELCGPTEPCVLPFQVLLENPLQFFQAELRIRDVNDH 131
Query: 129 APEFPAREMLLKISEITMPGKIFPLKMAHDLDTGSNGLQRYTISSNPHFHVLTRNRSEGR 188
+P F +E+LLKI E PG F ++ A DLD G+N LQ YTIS N HFH+ ++ +G
Sbjct: 132 SPVFLDKEILLKIPESITPGTTFLIERAQDLDVGTNSLQNYTISPNFHFHLNLQDSLDGI 191
Query: 189 KFPELVLDKPLDREEQPQLRLTLIALDGGSPPRSGTSEIQIQVLDINDNVPEFAQELYEA 248
P+LVL++ LDREEQP++RLTL ALDGGSPPRSGT+ ++I+V+DINDNVPEFA+ LYE
Sbjct: 192 ILPQLVLNRALDREEQPEIRLTLTALDGGSPPRSGTALVRIEVVDINDNVPEFAKLLYEV 251
Query: 249 QVPENNPLGSLVITVSARDLDAGSFGKVSYALFQV-DDVNQPFEINAITGEIRLRKALDF 307
Q+PE++P+GS V VSARDLD G+ G++SYA Q +D+ + F ++A +GE+ LR+ LDF
Sbjct: 252 QIPEDSPVGSQVAIVSARDLDIGTNGEISYAFSQASEDIRKTFRLSAKSGELLLRQKLDF 311
Query: 308 EEIQSYDVDVEATDGGGLSGKCSLVVRVLDVNDNAPELTMSFFISLIPENLPEITVAVFS 367
E IQ+Y V+++ATDGGGLSG C + V+V+D+NDN PELTMS I+ IPENL + +AVFS
Sbjct: 312 ESIQTYTVNIQATDGGGLSGTCVVFVQVMDLNDNPPELTMSTLINQIPENLQDTLIAVFS 371
Query: 368 VSDADSGHNQQVICSIENNLPFLLRPSVENFYTLVTEGALDRESRAEYNITITVTDLGTP 427
VSD DSG N +++CSI+++LPF L+PSVENFYTLV ALDRE+R+EYNITITVTD GTP
Sbjct: 372 VSDPDSGDNGRMVCSIQDDLPFFLKPSVENFYTLVISTALDRETRSEYNITITVTDFGTP 431
Query: 428 RLKTQQSITVQVSDVNDNVPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGINAQVTYS 487
RLKT+ +ITV VSDVNDN PAFTQTSYTLFVRENNSPALHIGSVSATDRDSG NAQVTYS
Sbjct: 432 RLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYS 491
Query: 488 LLPPQDPHLPLSSLVSINADNGHLFALRSLDYEALQSFEFRVGATDRGSPALSSEALVRL 547
LLPPQDPHLPL+SLVSINADNGHLFAL+SLDYEALQ+FEFRVGA DRGSPALSSEALVR+
Sbjct: 492 LLPPQDPHLPLASLVSINADNGHLFALQSLDYEALQAFEFRVGAADRGSPALSSEALVRV 551
Query: 548 LVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA 607
LVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA
Sbjct: 552 LVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA 611
Query: 608 TELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQP 667
TE GLFGVWAHNGEVRTARLL ERDAAK RLVVLVKDNGEPPRSATATLHVLLVDGFSQP
Sbjct: 612 TEPGLFGVWAHNGEVRTARLLRERDAAKQRLVVLVKDNGEPPRSATATLHVLLVDGFSQP 671
Query: 668 YLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRYSVPE 727
YL LPEAAPAQAQAD LTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGR SVPE
Sbjct: 672 YLLLPEAAPAQAQADLLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRCSVPE 731
Query: 728 GPFPGHLVDVSGTGTLSQSYQYKVCLTGGSETNEFKFLKPIMPNFPPQGTEREMEETPTS 787
GPFPG +VDVSGTGTLSQSYQY+VCLTGGS TNEFKFLKPI+PNF QG ER E P+
Sbjct: 732 GPFPGQMVDVSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNFVAQGAERVSEANPSF 791
Query: 788 RNSFPFS 794
R SF F+
Sbjct: 792 RKSFEFT 798
>gi|9256610 protocadherin beta 15 precursor [Homo sapiens]
Length = 787
Score = 1183 bits (3060), Expect = 0.0
Identities = 599/775 (77%), Positives = 670/775 (86%), Gaps = 1/775 (0%)
Query: 9 KKRQVAFFILLMLWGEVGSESIQYSVLEETESGTFVANLTKDLGLRVGELASRGARVVFK 68
++RQV +LL+ G E +YSV+EETE G+FVANL DLGL VGELA RGARVV +
Sbjct: 10 EQRQVLILLLLLEVTLAGWEPRRYSVMEETERGSFVANLANDLGLGVGELAERGARVVSE 69
Query: 69 GNRQHLQFDPQTHDLLLNEKLDREELCGSTEPCVLPFQVLLENPLQFFQASLRVRDINDH 128
N Q LQ D QT L+LNEKLDRE+LCG TEPC++ FQVLL+ PL+ F+A L V DINDH
Sbjct: 70 DNEQGLQLDLQTGQLILNEKLDREKLCGPTEPCIMHFQVLLKKPLEVFRAELLVTDINDH 129
Query: 129 APEFPAREMLLKISEITMPGKIFPLKMAHDLDTGSNGLQRYTISSNPHFHVLTRNRSEGR 188
+PEFP REM LKI E + G +FPLK A DLD GSN +Q Y IS N HFHV TR R +GR
Sbjct: 130 SPEFPEREMTLKIPETSSLGTVFPLKKARDLDVGSNNVQNYNISPNSHFHVSTRTRGDGR 189
Query: 189 KFPELVLDKPLDREEQPQLRLTLIALDGGSPPRSGTSEIQIQVLDINDNVPEFAQELYEA 248
K+PELVLD LDREEQ +LRLTL A+DGGSPPRSGT +I I VLD NDN PEF Q LYE
Sbjct: 190 KYPELVLDTELDREEQAELRLTLTAVDGGSPPRSGTVQILILVLDANDNAPEFVQALYEV 249
Query: 249 QVPENNPLGSLVITVSARDLDAGSFGKVSYALF-QVDDVNQPFEINAITGEIRLRKALDF 307
QVPEN+P+GSLV+ VSARDLD G+ G++SY+L+ ++++PFE+++++GEIRL K LDF
Sbjct: 250 QVPENSPVGSLVVKVSARDLDTGTNGEISYSLYYSSQEIDKPFELSSLSGEIRLIKKLDF 309
Query: 308 EEIQSYDVDVEATDGGGLSGKCSLVVRVLDVNDNAPELTMSFFISLIPENLPEITVAVFS 367
E + SYD+D+EA+DGGGLSGKCS+ V+VLDVNDN PEL++S S IPEN PE VA+F
Sbjct: 310 ETMSSYDLDIEASDGGGLSGKCSVSVKVLDVNDNFPELSISSLTSPIPENSPETEVALFR 369
Query: 368 VSDADSGHNQQVICSIENNLPFLLRPSVENFYTLVTEGALDRESRAEYNITITVTDLGTP 427
+ D DSG N ++ICSI++++PF L+PSVENFY LVTEGALDRE+RAEYNITIT+TDLGTP
Sbjct: 370 IRDRDSGENGKMICSIQDDVPFKLKPSVENFYRLVTEGALDRETRAEYNITITITDLGTP 429
Query: 428 RLKTQQSITVQVSDVNDNVPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGINAQVTYS 487
RLKT+QSITV VSDVNDN PAFTQTSYTLFVRENNSPALHIGSVSATDRDSG NAQVTYS
Sbjct: 430 RLKTEQSITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYS 489
Query: 488 LLPPQDPHLPLSSLVSINADNGHLFALRSLDYEALQSFEFRVGATDRGSPALSSEALVRL 547
LLPP+DPHLPL+SLVSIN DNGHLFAL+SLDYEALQ+FEFRVGATDRG PALSSEALVR+
Sbjct: 490 LLPPRDPHLPLTSLVSINTDNGHLFALQSLDYEALQAFEFRVGATDRGFPALSSEALVRV 549
Query: 548 LVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA 607
LVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA
Sbjct: 550 LVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA 609
Query: 608 TELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQP 667
TE GLFGVWAHNGEVRTARLLSERD AKHRLVVLVKDNGEPPRSATATL VLLVDGFSQP
Sbjct: 610 TEPGLFGVWAHNGEVRTARLLSERDVAKHRLVVLVKDNGEPPRSATATLQVLLVDGFSQP 669
Query: 668 YLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRYSVPE 727
YLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSV LFVAVRLCRRSRAASVGR SVPE
Sbjct: 670 YLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVFLFVAVRLCRRSRAASVGRCSVPE 729
Query: 728 GPFPGHLVDVSGTGTLSQSYQYKVCLTGGSETNEFKFLKPIMPNFPPQGTEREME 782
GPFPGHLVDVSGTGTLSQSYQY+VCLTGGSE+N+FKFLKPI PN Q + R+ E
Sbjct: 730 GPFPGHLVDVSGTGTLSQSYQYEVCLTGGSESNDFKFLKPIFPNIVSQDSRRKSE 784
>gi|14195605 protocadherin beta 16 precursor [Homo sapiens]
Length = 776
Score = 1179 bits (3049), Expect = 0.0
Identities = 592/767 (77%), Positives = 672/767 (87%), Gaps = 1/767 (0%)
Query: 9 KKRQVAFFILLMLWGEVGSESIQYSVLEETESGTFVANLTKDLGLRVGELASRGARVVFK 68
++RQV F +L+ G+E YSV+EETE G+FVANL KDLGL + E+++R AR++ +
Sbjct: 10 RQRQVLVFFVLLSLSGAGAELGSYSVVEETERGSFVANLGKDLGLGLTEMSTRKARIISQ 69
Query: 69 GNRQHLQFDPQTHDLLLNEKLDREELCGSTEPCVLPFQVLLENPLQFFQASLRVRDINDH 128
GN+QHLQ QT DLL+NEKLDREELCG TEPC+L FQVL+ENPL+ FQA LRV DINDH
Sbjct: 70 GNKQHLQLKAQTGDLLINEKLDREELCGPTEPCILHFQVLMENPLEIFQAELRVIDINDH 129
Query: 129 APEFPAREMLLKISEITMPGKIFPLKMAHDLDTGSNGLQRYTISSNPHFHVLTRNRSEGR 188
+P F +EM+LKI E + G FPL A DLD GSN +Q Y IS + HF VL +GR
Sbjct: 130 SPMFTEKEMILKIPENSPLGTEFPLNHALDLDVGSNNVQNYKISPSSHFRVLIHEFRDGR 189
Query: 189 KFPELVLDKPLDREEQPQLRLTLIALDGGSPPRSGTSEIQIQVLDINDNVPEFAQELYEA 248
K+PELVLDK LDREE+PQLRLTL ALDGGSPPRSGT++++I+V+DINDN PEF Q +Y+
Sbjct: 190 KYPELVLDKELDREEEPQLRLTLTALDGGSPPRSGTAQVRIEVVDINDNAPEFEQPIYKV 249
Query: 249 QVPENNPLGSLVITVSARDLDAGSFGKVSYALFQV-DDVNQPFEINAITGEIRLRKALDF 307
Q+PEN+PLGSLV TVSARDLD G+ GK+SY LFQ +D+++ E+N +TGE+RLRK +DF
Sbjct: 250 QIPENSPLGSLVATVSARDLDGGANGKISYTLFQPSEDISKTLEVNPMTGEVRLRKQVDF 309
Query: 308 EEIQSYDVDVEATDGGGLSGKCSLVVRVLDVNDNAPELTMSFFISLIPENLPEITVAVFS 367
E + SY+V ++ATDGGGLSGKC+L+++V+DVNDN P++TMS S IPEN PEI VAVFS
Sbjct: 310 EMVTSYEVRIKATDGGGLSGKCTLLLQVVDVNDNPPQVTMSALTSPIPENSPEIVVAVFS 369
Query: 368 VSDADSGHNQQVICSIENNLPFLLRPSVENFYTLVTEGALDRESRAEYNITITVTDLGTP 427
VSD DSG+N + I SI+ +LPFLL+PSV+NFYTLVTE ALDRE+RAEYNIT+TVTD+GTP
Sbjct: 370 VSDPDSGNNGKTISSIQEDLPFLLKPSVKNFYTLVTERALDREARAEYNITLTVTDMGTP 429
Query: 428 RLKTQQSITVQVSDVNDNVPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGINAQVTYS 487
RLKT+ +ITVQ+SDVNDN P FTQTSYTLFVRENNSPALHIGSVSATDRDSG NAQVTYS
Sbjct: 430 RLKTEHNITVQISDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYS 489
Query: 488 LLPPQDPHLPLSSLVSINADNGHLFALRSLDYEALQSFEFRVGATDRGSPALSSEALVRL 547
LLPPQDPHLPL+SLVSINADNGHLFALRSLDYEAL+ FEFRV ATDRGSPALSSEALVR+
Sbjct: 490 LLPPQDPHLPLASLVSINADNGHLFALRSLDYEALREFEFRVSATDRGSPALSSEALVRV 549
Query: 548 LVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA 607
LVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA
Sbjct: 550 LVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA 609
Query: 608 TELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQP 667
TE GLFGVWAHNGEVRTARLLSERDAAK RLVVLVKDNGEPPRSATATLHVLLVDGFSQP
Sbjct: 610 TEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHVLLVDGFSQP 669
Query: 668 YLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRYSVPE 727
+LPLPEAAP Q QA+SLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGR S+PE
Sbjct: 670 FLPLPEAAPGQTQANSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRCSMPE 729
Query: 728 GPFPGHLVDVSGTGTLSQSYQYKVCLTGGSETNEFKFLKPIMPNFPP 774
GPFPG LVDVSGTGTLSQSYQY+VCLTGGSET+EFKFLKPI+PNF P
Sbjct: 730 GPFPGRLVDVSGTGTLSQSYQYEVCLTGGSETSEFKFLKPIIPNFSP 776
>gi|9256608 protocadherin beta 14 precursor [Homo sapiens]
Length = 798
Score = 1166 bits (3016), Expect = 0.0
Identities = 591/784 (75%), Positives = 670/784 (85%), Gaps = 1/784 (0%)
Query: 9 KKRQVAFFILLMLWGEVGSESIQYSVLEETESGTFVANLTKDLGLRVGELASRGARVVFK 68
+KRQV F++L+ G+ES YSV EETE G+FVANL +DLGL V EL+SR ARVV
Sbjct: 10 RKRQVLIFLVLLGLSRAGTESAHYSVAEETEIGSFVANLARDLGLGVEELSSREARVVSD 69
Query: 69 GNRQHLQFDPQTHDLLLNEKLDREELCGSTEPCVLPFQVLLENPLQFFQASLRVRDINDH 128
N+++L D T +LLLNEKLDR+ELCGSTEPCVL FQV+LENPLQFF+ L V+DINDH
Sbjct: 70 DNKKYLHLDLLTGNLLLNEKLDRDELCGSTEPCVLHFQVVLENPLQFFRFELCVKDINDH 129
Query: 129 APEFPAREMLLKISEITMPGKIFPLKMAHDLDTGSNGLQRYTISSNPHFHVLTRNRSEGR 188
+P F +E+L+KISE T G F ++ A DLD GSN LQ YTIS N HF++ + S+ +
Sbjct: 130 SPTFLDKEILIKISEGTTVGATFLMESAQDLDVGSNSLQNYTISPNSHFYIKIPDSSDRK 189
Query: 189 KFPELVLDKPLDREEQPQLRLTLIALDGGSPPRSGTSEIQIQVLDINDNVPEFAQELYEA 248
+PELVLD+ LD E++ +LRLTL A+DGGSPP+SGT+ + I+VLDINDN PEF Q LYE
Sbjct: 190 IYPELVLDRALDYEQEAELRLTLTAVDGGSPPKSGTTLVLIKVLDINDNAPEFPQSLYEV 249
Query: 249 QVPENNPLGSLVITVSARDLDAGSFGKVSYALFQV-DDVNQPFEINAITGEIRLRKALDF 307
QVPE+ PLGS + T+SA+DLDAG++GK+SY F +D+ + FEIN I+GE+ LR LDF
Sbjct: 250 QVPEDRPLGSWIATISAKDLDAGNYGKISYTFFHASEDIRKTFEINPISGEVNLRSPLDF 309
Query: 308 EEIQSYDVDVEATDGGGLSGKCSLVVRVLDVNDNAPELTMSFFISLIPENLPEITVAVFS 367
E IQSY ++++ATDGGGLSGKC+L+V+V+D+NDN PE+T+S IPEN E VA+FS
Sbjct: 310 EVIQSYTINIQATDGGGLSGKCTLLVKVMDINDNPPEVTISSITKRIPENASETLVALFS 369
Query: 368 VSDADSGHNQQVICSIENNLPFLLRPSVENFYTLVTEGALDRESRAEYNITITVTDLGTP 427
+ D DSG N ++ICSI++NLPF L+P+ +NF+TLV+E ALDRES+AEYNITITVTDLGTP
Sbjct: 370 ILDQDSGDNGRMICSIQDNLPFFLKPTFKNFFTLVSEKALDRESQAEYNITITVTDLGTP 429
Query: 428 RLKTQQSITVQVSDVNDNVPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGINAQVTYS 487
RLKT+ +ITV +SDVNDN P FTQTSYTLFVRENNSPALHIGSVSATDRDSG NAQV YS
Sbjct: 430 RLKTEYNITVLLSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVNYS 489
Query: 488 LLPPQDPHLPLSSLVSINADNGHLFALRSLDYEALQSFEFRVGATDRGSPALSSEALVRL 547
LLPPQD HLPL+SLVSINADNGHLFALRSLDYEALQ FEFRVGATDRGSPALSSEALVR+
Sbjct: 490 LLPPQDRHLPLASLVSINADNGHLFALRSLDYEALQEFEFRVGATDRGSPALSSEALVRV 549
Query: 548 LVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA 607
LVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA
Sbjct: 550 LVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA 609
Query: 608 TELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQP 667
TE GLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQP
Sbjct: 610 TEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQP 669
Query: 668 YLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRYSVPE 727
YLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGR SVPE
Sbjct: 670 YLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRCSVPE 729
Query: 728 GPFPGHLVDVSGTGTLSQSYQYKVCLTGGSETNEFKFLKPIMPNFPPQGTEREMEETPTS 787
GPFPGHLVDVSGTGTLSQSYQY+VCLTGGS TNEFKFLKPI+PNF T R M E
Sbjct: 730 GPFPGHLVDVSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNFQVHDTGRNMGEIENF 789
Query: 788 RNSF 791
RNSF
Sbjct: 790 RNSF 793
>gi|11036654 protocadherin beta 13 precursor [Homo sapiens]
Length = 798
Score = 1152 bits (2980), Expect = 0.0
Identities = 584/788 (74%), Positives = 670/788 (85%), Gaps = 3/788 (0%)
Query: 9 KKRQVAF-FILLMLWGEVGSESIQYSVLEETESGTFVANLTKDLGLRVGELASRGARVVF 67
++RQV F F+LL L +E YSV+EETE +FV NL KDLGL E + RG RVV
Sbjct: 10 RQRQVLFSFLLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREFSRRGVRVVS 69
Query: 68 KGNRQHLQFDPQTHDLLLNEKLDREELCGSTEPCVLPFQVLLENPLQFFQASLRVRDIND 127
+GN+ HLQ + +T DLLLNEKLDRE+LCG TEPCVL FQVLLE+P +FFQA L+V DIND
Sbjct: 70 RGNKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQAELQVIDIND 129
Query: 128 HAPEFPAREMLLKISEITMPGKIFPLKMAHDLDTGSNGLQRYTISSNPHFHVLTRNRSEG 187
H+P F ++ML+K+SE + PG FPLK A DLD G N ++ Y IS N +F VLTR RS+G
Sbjct: 130 HSPVFLDKQMLVKVSESSPPGTTFPLKNAEDLDVGQNNIENYIISPNSYFRVLTRKRSDG 189
Query: 188 RKFPELVLDKPLDREEQPQLRLTLIALDGGSPPRSGTSEIQIQVLDINDNVPEFAQELYE 247
RK+PELVLDK LDREE+ +LRLTL ALDGGSPPRSGT+++ I+VLD+NDN PEF Q Y
Sbjct: 190 RKYPELVLDKALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVLDVNDNAPEFEQPFYR 249
Query: 248 AQVPENNPLGSLVITVSARDLDAGSFGKVSYALFQV-DDVNQPFEINAITGEIRLRKALD 306
Q+ E++P+G LV+ VSA D+D G G++SY+LFQ +++ + F+IN +TGEI L+K LD
Sbjct: 250 VQISEDSPVGFLVVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTGEIELKKQLD 309
Query: 307 FEEIQSYDVDVEATDGGGLSGKCSLVVRVLDVNDNAPELTMSFFISLIPENLPEITVAVF 366
FE++QSY+V++EA D G SGKC+++++V+DVND+APE+TMS F S IPEN PE VA+F
Sbjct: 310 FEKLQSYEVNIEARDAGTFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENAPETVVALF 369
Query: 367 SVSDADSGHNQQVICSIENNLPFLLRPSVENFYTLVTEGALDRESRAEYNITITVTDLGT 426
SVSD DSG N ++ CSI+ +LPFLL+ S ENFYTL+TE LDRESRAEYNITITVTDLGT
Sbjct: 370 SVSDLDSGENGKISCSIQEDLPFLLK-SAENFYTLLTERPLDRESRAEYNITITVTDLGT 428
Query: 427 PRLKTQQSITVQVSDVNDNVPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGINAQVTY 486
P L TQ ++TV ++DVNDN PAFTQTSYTLFVRENNSPALHI SVSATDRDSG NAQVTY
Sbjct: 429 PMLITQLNMTVLIADVNDNAPAFTQTSYTLFVRENNSPALHIRSVSATDRDSGTNAQVTY 488
Query: 487 SLLPPQDPHLPLSSLVSINADNGHLFALRSLDYEALQSFEFRVGATDRGSPALSSEALVR 546
SLLPPQDPHLPL+SLVSINADNGHLFALRSLDYEALQ F+FRVGA+D GSPALSSEALVR
Sbjct: 489 SLLPPQDPHLPLTSLVSINADNGHLFALRSLDYEALQGFQFRVGASDHGSPALSSEALVR 548
Query: 547 LLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK 606
++VLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK
Sbjct: 549 VVVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK 608
Query: 607 ATELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQ 666
ATELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQ
Sbjct: 609 ATELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQ 668
Query: 667 PYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRYSVP 726
PYLPLPEAAP QAQAD LTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGR VP
Sbjct: 669 PYLPLPEAAPTQAQADLLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRCLVP 728
Query: 727 EGPFPGHLVDVSGTGTLSQSYQYKVCLTGGSETNEFKFLKPIMPNFPPQGTEREMEETPT 786
EGP PGHLVD+SGT TLSQSYQY+VCL GGS TNEFKFLKPI+PNFPPQ +E++ T
Sbjct: 729 EGPLPGHLVDMSGTRTLSQSYQYEVCLAGGSGTNEFKFLKPIIPNFPPQCPGKEIQGNST 788
Query: 787 SRNSFPFS 794
N+F F+
Sbjct: 789 FPNNFGFN 796
>gi|11276081 protocadherin beta 8 precursor [Homo sapiens]
Length = 801
Score = 1148 bits (2970), Expect = 0.0
Identities = 580/788 (73%), Positives = 666/788 (84%), Gaps = 2/788 (0%)
Query: 9 KKRQVAF-FILLMLWGEVGSESIQYSVLEETESGTFVANLTKDLGLRVGELASRGARVVF 67
++RQV F F+LL L +E YSV+EETE +FV NL KDLGL E + RG RVV
Sbjct: 10 RQRQVLFSFLLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREFSRRGVRVVS 69
Query: 68 KGNRQHLQFDPQTHDLLLNEKLDREELCGSTEPCVLPFQVLLENPLQFFQASLRVRDIND 127
+GN+ HLQ + +T DLLLNEKLDRE+LCG TEPCVL FQVLLE+P +FFQA L+V DIND
Sbjct: 70 RGNKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQAELQVIDIND 129
Query: 128 HAPEFPAREMLLKISEITMPGKIFPLKMAHDLDTGSNGLQRYTISSNPHFHVLTRNRSEG 187
H+P F ++ML+K+SE + PG FPLK A DLD G N ++ Y IS N +F VLTR RS+G
Sbjct: 130 HSPVFLDKQMLVKVSESSPPGTAFPLKNAEDLDIGQNNIENYIISPNSYFRVLTRKRSDG 189
Query: 188 RKFPELVLDKPLDREEQPQLRLTLIALDGGSPPRSGTSEIQIQVLDINDNVPEFAQELYE 247
RK+PELVLD LDREE+ +LRLTL ALDGGSPPRSGT+++ I+V+D+NDN PEF Q Y
Sbjct: 190 RKYPELVLDNALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVVDVNDNAPEFQQPFYR 249
Query: 248 AQVPENNPLGSLVITVSARDLDAGSFGKVSYALFQV-DDVNQPFEINAITGEIRLRKALD 306
Q+ E++P+ LV+ VSA D+D G G++SY+LFQ D++++ F+++ +TGEIRL+K LD
Sbjct: 250 VQISEDSPISFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDFLTGEIRLKKQLD 309
Query: 307 FEEIQSYDVDVEATDGGGLSGKCSLVVRVLDVNDNAPELTMSFFISLIPENLPEITVAVF 366
FE+ QSY+V++EA D GG SGKC+++++V+DVND+APE+TMS F S IPEN PE VA+F
Sbjct: 310 FEKFQSYEVNIEARDAGGFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENAPETVVALF 369
Query: 367 SVSDADSGHNQQVICSIENNLPFLLRPSVENFYTLVTEGALDRESRAEYNITITVTDLGT 426
SVSD DSG N ++ CSI+ +LPFLL+ SV NFYTL+TE LDRESRAEYN+TITVTDLGT
Sbjct: 370 SVSDLDSGENGKISCSIQEDLPFLLKSSVGNFYTLLTETPLDRESRAEYNVTITVTDLGT 429
Query: 427 PRLKTQQSITVQVSDVNDNVPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGINAQVTY 486
PRL T ++TV VSDVNDN PAFTQTSYTLFVRENNSPALHIGSVSATDRDSG NAQVTY
Sbjct: 430 PRLTTHLNMTVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTY 489
Query: 487 SLLPPQDPHLPLSSLVSINADNGHLFALRSLDYEALQSFEFRVGATDRGSPALSSEALVR 546
SLLPPQDPHLPL+SLVSIN DNGHLFALRSLDYEALQ+FEFRVGA+DRGSPALSSEALVR
Sbjct: 490 SLLPPQDPHLPLASLVSINTDNGHLFALRSLDYEALQAFEFRVGASDRGSPALSSEALVR 549
Query: 547 LLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK 606
+LVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK
Sbjct: 550 VLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK 609
Query: 607 ATELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQ 666
ATE GLFGVWAHNGEVRTARLLSERDAAK RLVVLVKDNGEPP SATATLH+LLVDGFSQ
Sbjct: 610 ATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPCSATATLHLLLVDGFSQ 669
Query: 667 PYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRYSVP 726
PYLPLPEAAPAQ QADSLTVYLVVALASVSSLFLFSVLLFVAV LCRRSRAASVGR SVP
Sbjct: 670 PYLPLPEAAPAQGQADSLTVYLVVALASVSSLFLFSVLLFVAVLLCRRSRAASVGRCSVP 729
Query: 727 EGPFPGHLVDVSGTGTLSQSYQYKVCLTGGSETNEFKFLKPIMPNFPPQGTEREMEETPT 786
EGPFPGHLVDV GTG+LSQ+YQY+VCL GGS TNEF+FLKP++PN EME+
Sbjct: 730 EGPFPGHLVDVRGTGSLSQNYQYEVCLAGGSGTNEFQFLKPVLPNIQGHSFGPEMEQNSN 789
Query: 787 SRNSFPFS 794
RN F FS
Sbjct: 790 FRNGFGFS 797
>gi|14195616 protocadherin beta 9 precursor [Homo sapiens]
Length = 797
Score = 1135 bits (2937), Expect = 0.0
Identities = 579/789 (73%), Positives = 656/789 (83%), Gaps = 5/789 (0%)
Query: 9 KKRQVAFFILLMLWGE--VGSESIQYSVLEETESGTFVANLTKDLGLRVGELASRGARVV 66
++RQV F L + WG GS +YSV EETE G+FV NL KDLGL GELA+RG RVV
Sbjct: 10 RQRQVLF--LFLFWGVSLAGSGFGRYSVTEETEKGSFVVNLAKDLGLAEGELAARGTRVV 67
Query: 67 FKGNRQHLQFDPQTHDLLLNEKLDREELCGSTEPCVLPFQVLLENPLQFFQASLRVRDIN 126
N+Q+L D T +LL NEKLDRE+LCG EPC+L FQ+L+++P Q ++A LRVRDIN
Sbjct: 68 SDDNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAELRVRDIN 127
Query: 127 DHAPEFPAREMLLKISEITMPGKIFPLKMAHDLDTGSNGLQRYTISSNPHFHVLTRNRSE 186
DH+P F +EM+LKISE T G F L+ A D D G N +Q YTISSN FH+ E
Sbjct: 128 DHSPVFRHKEMVLKISENTAEGTAFRLERAQDPDEGHNSIQNYTISSNSFFHIKISGSDE 187
Query: 187 GRKFPELVLDKPLDREEQPQLRLTLIALDGGSPPRSGTSEIQIQVLDINDNVPEFAQELY 246
G +PELVLDK LDREEQ +L LTL ALDGGSP RSGTS I+I VLD+NDN P+FAQ LY
Sbjct: 188 GMIYPELVLDKALDREEQEELSLTLTALDGGSPSRSGTSTIRIVVLDVNDNAPQFAQALY 247
Query: 247 EAQVPENNPLGSLVITVSARDLDAGSFGKVSYALFQV-DDVNQPFEINAITGEIRLRKAL 305
E Q PEN+P+GSL++ VSA D D+G +VSY+ F +D+ F+IN +GEI LR+ L
Sbjct: 248 ETQAPENSPVGSLIVKVSAGDADSGVNAEVSYSFFDASEDILTTFQINPFSGEIFLRELL 307
Query: 306 DFEEIQSYDVDVEATDGGGLSGKCSLVVRVLDVNDNAPELTMSFFISLIPENLPEITVAV 365
D+E + SY ++++A DGGGLS +C+++++VLD NDN PEL +S + + EN P I +AV
Sbjct: 308 DYELVNSYKINIQAMDGGGLSARCTVLIKVLDSNDNPPELIISSLSNSVAENSPGIVLAV 367
Query: 366 FSVSDADSGHNQQVICSIENNLPFLLRPSVENFYTLVTEGALDRESRAEYNITITVTDLG 425
F + D DSG N + IC +++NLPF L+PSV+NFY L+TEGALDRES+AEYNITITVTDLG
Sbjct: 368 FKIKDRDSGENGKTICYVQDNLPFFLKPSVDNFYILMTEGALDRESKAEYNITITVTDLG 427
Query: 426 TPRLKTQQSITVQVSDVNDNVPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGINAQVT 485
TPRLKT+ SIT+QVSDVNDN PAFTQTSYTLFVRENNSPALHIGSVSATDRDSG NAQVT
Sbjct: 428 TPRLKTEHSITLQVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVT 487
Query: 486 YSLLPPQDPHLPLSSLVSINADNGHLFALRSLDYEALQSFEFRVGATDRGSPALSSEALV 545
YSLLPPQDPHLPL+SLVSINADNGHLFALRSLDYEALQ+F+FRVGA+DRGSPALSSEALV
Sbjct: 488 YSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFDFRVGASDRGSPALSSEALV 547
Query: 546 RLLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLL 605
R+LVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLL
Sbjct: 548 RVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLL 607
Query: 606 KATELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFS 665
KATE GLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFS
Sbjct: 608 KATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFS 667
Query: 666 QPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRYSV 725
QPYLPLPEAAPAQAQAD LTVYLVVALASVSSLFL SVLLFVAVRLCRRSRAASVGR SV
Sbjct: 668 QPYLPLPEAAPAQAQADLLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAASVGRCSV 727
Query: 726 PEGPFPGHLVDVSGTGTLSQSYQYKVCLTGGSETNEFKFLKPIMPNFPPQGTEREMEETP 785
PEGPFPGHLVDVSGTGTL QSYQY+VCLTGGSET EFKFLKPI P+ PP +E+EE
Sbjct: 728 PEGPFPGHLVDVSGTGTLFQSYQYEVCLTGGSETGEFKFLKPITPHLPPHRGGKEIEENS 787
Query: 786 TSRNSFPFS 794
T NSF F+
Sbjct: 788 TLPNSFGFN 796
>gi|9256604 protocadherin beta 11 precursor [Homo sapiens]
Length = 797
Score = 1117 bits (2889), Expect = 0.0
Identities = 570/785 (72%), Positives = 647/785 (82%), Gaps = 1/785 (0%)
Query: 11 RQVAFFILLMLWGEVGSESIQYSVLEETESGTFVANLTKDLGLRVGELASRGARVVFKGN 70
RQV +L+ + GSE+ +SV EE +SG+FV NL KDLGL+V EL+SRGARVV
Sbjct: 12 RQVLLLFVLLGMSQAGSETWSFSVAEEMQSGSFVGNLAKDLGLKVRELSSRGARVVSNDK 71
Query: 71 RQHLQFDPQTHDLLLNEKLDREELCGSTEPCVLPFQVLLENPLQFFQASLRVRDINDHAP 130
+Q LQ D T DLLL+E LDREELCGS EPCVL QVL++NP QF Q L+VRDINDH+P
Sbjct: 72 KQRLQLDINTGDLLLSETLDREELCGSIEPCVLHLQVLMQNPTQFLQIELQVRDINDHSP 131
Query: 131 EFPAREMLLKISEITMPGKIFPLKMAHDLDTGSNGLQRYTISSNPHFHVLTRNRSEGRKF 190
F ++MLL+I E + G +F L+ A DLD G N ++ YTIS N HFH+ R + RK+
Sbjct: 132 IFSEKQMLLEIPENSPVGAVFLLESAKDLDVGINAVKSYTISPNSHFHIKMRVIPDNRKY 191
Query: 191 PELVLDKPLDREEQPQLRLTLIALDGGSPPRSGTSEIQIQVLDINDNVPEFAQELYEAQV 250
PELVLDK LD EE P+L L ALDGGSPPRSGT+ +++ V+DINDN PEF Q YE ++
Sbjct: 192 PELVLDKALDYEELPELSFILSALDGGSPPRSGTALVRVVVVDINDNSPEFEQAFYEVKI 251
Query: 251 PENNPLGSLVITVSARDLDAGSFGKVSYALFQV-DDVNQPFEINAITGEIRLRKALDFEE 309
EN+ LGSL++ VSA DLD+G+ G++ Y +D+ + FEIN +GEI LR LDFE
Sbjct: 252 RENSILGSLILIVSAWDLDSGTNGEICYTFSHASEDIRKTFEINQKSGEITLRAPLDFET 311
Query: 310 IQSYDVDVEATDGGGLSGKCSLVVRVLDVNDNAPELTMSFFISLIPENLPEITVAVFSVS 369
I+SY + ++ATDGGGL GK ++++ V+DVNDNAPE+T+S S IPEN PE V VFS+
Sbjct: 312 IESYSIIIQATDGGGLFGKSTVIIHVIDVNDNAPEITVSSITSPIPENTPETVVMVFSIQ 371
Query: 370 DADSGHNQQVICSIENNLPFLLRPSVENFYTLVTEGALDRESRAEYNITITVTDLGTPRL 429
D DSG N +++CSI +LPF+L+ SVEN+YTL TE LDRES AEYNITITVTDLG PRL
Sbjct: 372 DIDSGDNGRIVCSIPEDLPFVLKSSVENYYTLETERPLDRESTAEYNITITVTDLGIPRL 431
Query: 430 KTQQSITVQVSDVNDNVPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGINAQVTYSLL 489
KT+ + TV VSDVNDN P FTQTSYTLFVRENNSPALHIGSVSATDRDSG NAQV YSLL
Sbjct: 432 KTEHNTTVLVSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVNYSLL 491
Query: 490 PPQDPHLPLSSLVSINADNGHLFALRSLDYEALQSFEFRVGATDRGSPALSSEALVRLLV 549
PPQD HLPL+SLVSIN DNGHLFALRSLDYEALQ+F+FRVGATDRGSPALSSEALVR+LV
Sbjct: 492 PPQDLHLPLASLVSINTDNGHLFALRSLDYEALQAFDFRVGATDRGSPALSSEALVRVLV 551
Query: 550 LDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATE 609
LDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATE
Sbjct: 552 LDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATE 611
Query: 610 LGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQPYL 669
GLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATL VLLVDGFSQPYL
Sbjct: 612 PGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLQVLLVDGFSQPYL 671
Query: 670 PLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRYSVPEGP 729
PLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVG SVP+GP
Sbjct: 672 PLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGSCSVPKGP 731
Query: 730 FPGHLVDVSGTGTLSQSYQYKVCLTGGSETNEFKFLKPIMPNFPPQGTEREMEETPTSRN 789
FPGHLVDVSGTGTLSQSYQY+VCLTGGSETNEFKFLKP++PN +G + EE T RN
Sbjct: 732 FPGHLVDVSGTGTLSQSYQYEVCLTGGSETNEFKFLKPVIPNIQAKGLGKNSEENSTFRN 791
Query: 790 SFPFS 794
SF F+
Sbjct: 792 SFGFN 796
>gi|9256602 protocadherin beta 10 precursor [Homo sapiens]
Length = 800
Score = 1114 bits (2882), Expect = 0.0
Identities = 573/791 (72%), Positives = 649/791 (82%), Gaps = 7/791 (0%)
Query: 9 KKRQVAFFILLMLWGE--VGSESIQYSVLEETESGTFVANLTKDLGLRVGELASRGARVV 66
++RQV F L + WG GS +YSV EETE G+FV NL KDLGL GELA+RG RVV
Sbjct: 10 RQRQVLF--LFLFWGVSLAGSGFGRYSVTEETEKGSFVVNLAKDLGLAEGELAARGTRVV 67
Query: 67 FKGNRQHLQFDPQTHDLLLNEKLDREELCGSTEPCVLPFQVLLENPLQFFQASLRVRDIN 126
N+Q+L D T +LL NEKLDRE+LCG EPC+L FQ+L+++P Q ++A LRVRDIN
Sbjct: 68 SDDNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAELRVRDIN 127
Query: 127 DHAPEFPAREMLLKISEITMPGKIFPLKMAHDLDTGSNGLQRYTISSNPHFHVLTRNRSE 186
DHAP F +E +LKISE T G F L+ A D D G NG+Q YTIS N FH+ E
Sbjct: 128 DHAPVFQDKETVLKISENTAEGTAFRLERAQDPDGGLNGIQNYTISPNSFFHINISGGDE 187
Query: 187 GRKFPELVLDKPLDREEQPQLRLTLIALDGGSPPRSGTSEIQIQVLDINDNVPEFAQELY 246
G +PELVLDK LDREEQ +L LTL ALDGGSP RSGTS ++I VLD+NDN P+FAQ LY
Sbjct: 188 GMIYPELVLDKALDREEQGELSLTLTALDGGSPSRSGTSTVRIVVLDVNDNAPQFAQALY 247
Query: 247 EAQVPENNPLGSLVITVSARDLDAGSFGKVSYALFQV-DDVNQPFEINAITGEIRLRKAL 305
E Q PEN+P+G L++ V A D+D+G +VSY+ F +++ F+IN +GEI LR+ L
Sbjct: 248 ETQAPENSPIGFLIVKVWAEDVDSGVNAEVSYSFFDASENIRTTFQINPFSGEIFLRELL 307
Query: 306 DFEEIQSYDVDVEATDGGGLSGKCSLVVRVLDVNDNAPELTMSFFISLIPENLPEITVAV 365
D+E + SY ++++A DGGGLS +C ++V VLD NDN PEL +S F + + EN PE +AV
Sbjct: 308 DYELVNSYKINIQAMDGGGLSARCRVLVEVLDTNDNPPELIVSSFSNSVAENSPETPLAV 367
Query: 366 FSVSDADSGHNQQVICSIENNLPFLLRPSVENFYTLVTEGALDRESRAEYNITITVTDLG 425
F ++D DSG N +++C I+ NLPFLL+PSVENFY L+TEGALDRE RAEYNITITVTDLG
Sbjct: 368 FKINDRDSGENGKMVCYIQENLPFLLKPSVENFYILITEGALDREIRAEYNITITVTDLG 427
Query: 426 TPRLKTQQSITVQVSDVNDNVPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGINAQVT 485
TPRLKT+ +ITV VSDVNDN PAFTQTSYTLFVRENNSPALHIGSVSATDRDSG NAQVT
Sbjct: 428 TPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVT 487
Query: 486 YSLLPPQDPHLPLSSLVSINADNGHLFALRSLDYEALQSFEFRVGATDRGSPALSSEALV 545
YSLLPPQDPHLPL+SLVSINADNGHLFALRSLDYEALQ+FEFRVGATDRGSPALS EALV
Sbjct: 488 YSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSREALV 547
Query: 546 RLLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLL 605
R+LVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLL
Sbjct: 548 RVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLL 607
Query: 606 KATELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFS 665
KATE GLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLH+LLVDGFS
Sbjct: 608 KATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHLLLVDGFS 667
Query: 666 QPYLPLPEAAPAQAQ--ADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRY 723
QPYLPLPEAAPAQAQ AD LTVYLVVALASVSSLFL SVLLFVAVRLCRRSRAASVGR
Sbjct: 668 QPYLPLPEAAPAQAQAEADLLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAASVGRC 727
Query: 724 SVPEGPFPGHLVDVSGTGTLSQSYQYKVCLTGGSETNEFKFLKPIMPNFPPQGTEREMEE 783
SVPEGPFPGHLVDV G TLSQSYQY+VCLTGG T+EFKFLKP++ + QG R+ EE
Sbjct: 728 SVPEGPFPGHLVDVRGAETLSQSYQYEVCLTGGPGTSEFKFLKPVISDIQAQGPGRKGEE 787
Query: 784 TPTSRNSFPFS 794
T RNSF F+
Sbjct: 788 NSTFRNSFGFN 798
>gi|9256606 protocadherin beta 12 precursor [Homo sapiens]
Length = 795
Score = 1113 bits (2880), Expect = 0.0
Identities = 568/784 (72%), Positives = 647/784 (82%), Gaps = 1/784 (0%)
Query: 11 RQVAFFILLMLWGEVGSESIQYSVLEETESGTFVANLTKDLGLRVGELASRGARVVFKGN 70
RQV F +L+ + GSE+ + V+EE +SG+FV NL K LGL V EL+SRGARVV N
Sbjct: 12 RQVLLFFVLLGMSQAGSETGNFLVMEELQSGSFVGNLAKTLGLEVSELSSRGARVVSNDN 71
Query: 71 RQHLQFDPQTHDLLLNEKLDREELCGSTEPCVLPFQVLLENPLQFFQASLRVRDINDHAP 130
++ LQ D T DLLL E LDREELCGS EPCVL FQVL++NP QF Q L+VRDINDH+P
Sbjct: 72 KECLQLDTNTGDLLLREMLDREELCGSNEPCVLYFQVLMKNPTQFLQIELQVRDINDHSP 131
Query: 131 EFPAREMLLKISEITMPGKIFPLKMAHDLDTGSNGLQRYTISSNPHFHVLTRNRSEGRKF 190
F +EMLL+I E + G +F L+ A DLD G N ++ YTI+ N HFHV R + RK+
Sbjct: 132 VFLEKEMLLEIPENSPVGAVFLLESAKDLDVGINAVKSYTINPNSHFHVKIRVNPDNRKY 191
Query: 191 PELVLDKPLDREEQPQLRLTLIALDGGSPPRSGTSEIQIQVLDINDNVPEFAQELYEAQV 250
PELVLDK LD EE+P+L L ALDGGSPPRSGT+ +++ V+DINDN PEF Q YE ++
Sbjct: 192 PELVLDKALDYEERPELSFILTALDGGSPPRSGTALVRVVVVDINDNSPEFEQAFYEVKI 251
Query: 251 PENNPLGSLVITVSARDLDAGSFGKVSYALFQV-DDVNQPFEINAITGEIRLRKALDFEE 309
EN+ LGSLV+TVSA DLD+G+ ++SY +D+ + FEIN +G+I L LDFE
Sbjct: 252 LENSILGSLVVTVSAWDLDSGTNSELSYTFSHASEDIRKTFEINQKSGDITLTAPLDFEA 311
Query: 310 IQSYDVDVEATDGGGLSGKCSLVVRVLDVNDNAPELTMSFFISLIPENLPEITVAVFSVS 369
I+SY + ++ATDGGGL GK ++ ++V+DVNDNAPE+T+S S IPEN PE V VF +
Sbjct: 312 IESYSIIIQATDGGGLFGKSTVRIQVMDVNDNAPEITVSSITSPIPENTPETVVMVFRIR 371
Query: 370 DADSGHNQQVICSIENNLPFLLRPSVENFYTLVTEGALDRESRAEYNITITVTDLGTPRL 429
D DSG N +++CSI ++PF+L+ SV N+YTL TE LDRESRAEYNITITVTDLGTPRL
Sbjct: 372 DRDSGDNGKMVCSIPEDIPFVLKSSVNNYYTLETERPLDRESRAEYNITITVTDLGTPRL 431
Query: 430 KTQQSITVQVSDVNDNVPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGINAQVTYSLL 489
KT+ +ITV VSDVNDN PAFTQTSY LFVRENNSPALHIGS+SATDRDSG NAQV YSLL
Sbjct: 432 KTEHNITVLVSDVNDNAPAFTQTSYALFVRENNSPALHIGSISATDRDSGTNAQVNYSLL 491
Query: 490 PPQDPHLPLSSLVSINADNGHLFALRSLDYEALQSFEFRVGATDRGSPALSSEALVRLLV 549
P QDPHLPL+SLVSINADNGHLFALRSLDYEALQ F+FRVGATD GSPALSSEALVR+LV
Sbjct: 492 PSQDPHLPLASLVSINADNGHLFALRSLDYEALQGFQFRVGATDHGSPALSSEALVRVLV 551
Query: 550 LDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATE 609
LDANDNSPFVLYPLQNGSAPCTELVP AAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATE
Sbjct: 552 LDANDNSPFVLYPLQNGSAPCTELVPWAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATE 611
Query: 610 LGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQPYL 669
GLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQPYL
Sbjct: 612 PGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQPYL 671
Query: 670 PLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRYSVPEGP 729
PLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA VGR SVPEGP
Sbjct: 672 PLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAAPVGRCSVPEGP 731
Query: 730 FPGHLVDVSGTGTLSQSYQYKVCLTGGSETNEFKFLKPIMPNFPPQGTEREMEETPTSRN 789
FPGHLVDVSGTGTLSQSY Y+VC+TGGS +N+FKFLKPI+PNF PQ T E+EE P +N
Sbjct: 732 FPGHLVDVSGTGTLSQSYHYEVCVTGGSRSNKFKFLKPIIPNFLPQSTGSEVEENPPFQN 791
Query: 790 SFPF 793
+ F
Sbjct: 792 NLGF 795
>gi|11036656 protocadherin beta 7 precursor [Homo sapiens]
Length = 793
Score = 1102 bits (2850), Expect = 0.0
Identities = 568/795 (71%), Positives = 647/795 (81%), Gaps = 5/795 (0%)
Query: 2 MQTKVQN--KKRQVAFFILLMLWGEVGSESIQYSVLEETESGTFVANLTKDLGLRVGELA 59
M+ +V+ +KRQV F + + G+E ++Y V EETE GTF+ NL KDLGL VGEL
Sbjct: 1 MEARVERAVQKRQVLFLCVFLGMSWAGAEPLRYFVAEETERGTFLTNLAKDLGLGVGELR 60
Query: 60 SRGARVVFKGNRQHLQFDPQTHDLLLNEKLDREELCGSTEPCVLPFQVLLENPLQFFQAS 119
+RG R+V N Q L T DLLLNEKLDREELCG EPCVLPFQ+LLE P Q F+A
Sbjct: 61 ARGTRIVSDQNMQILLLSSLTGDLLLNEKLDREELCGPREPCVLPFQLLLEKPFQIFRAE 120
Query: 120 LRVRDINDHAPEFPAREMLLKISEITMPGKIFPLKMAHDLDTGSNGLQRYTISSNPHFHV 179
L VRDINDHAP F RE+ LKI E T PG F L+ A D D G+N L YTIS N +FH+
Sbjct: 121 LWVRDINDHAPVFLDREISLKILESTTPGAAFLLESAQDSDVGTNSLSNYTISPNAYFHI 180
Query: 180 LTRNRSEGRKFPELVLDKPLDREEQPQLRLTLIALDGGSPPRSGTSEIQIQVLDINDNVP 239
+ EG +PELVL++ LDREE P+ LTL ALDGGSPPRSGT+ ++I VLD+NDN P
Sbjct: 181 NVHDSGEGNIYPELVLNQVLDREEIPEFSLTLTALDGGSPPRSGTALVRILVLDVNDNAP 240
Query: 240 EFAQELYEAQVPENNPLGSLVITVSARDLDAGSFGKVSYAL-FQVDDVNQPFEINAITGE 298
+F + LY+ QVPEN+P+GS+V++VSARDLD GS G+++YA + + + + F+IN +G
Sbjct: 241 DFVRSLYKVQVPENSPVGSMVVSVSARDLDTGSNGEIAYAFSYATERILKTFQINPTSGS 300
Query: 299 IRLRKALDFEEIQSYDVDVEATDGGGLSGKCSLVVRVLDVNDNAPELTMSFFISLIPENL 358
+ L+ LD+E IQ+Y + ++A DGGGLSGKC++VV V D+NDN PEL +S S I EN
Sbjct: 301 LHLKAQLDYEAIQTYTLTIQAKDGGGLSGKCTVVVDVTDINDNRPELLLSSLTSPIAENS 360
Query: 359 PEITVAVFSVSDADSGHNQQVICSIENNLPFLLRPSVENFYTLVTEGALDRESRAEYNIT 418
PE VAVF + D DSG+N + +CSI++++PF+L+PSVENFYTLVTE LDRE EYNIT
Sbjct: 361 PETVVAVFRIRDRDSGNNGKTVCSIQDDVPFILKPSVENFYTLVTEKPLDRERNTEYNIT 420
Query: 419 ITVTDLGTPRLKTQQSITVQVSDVNDNVPAFTQTSYTLFVRENNSPALHIGSVSATDRDS 478
ITVTDLGTPRLKT+ +ITV VSDVNDN PAFTQTSYTLFVRENNSPAL IGSVSATDRDS
Sbjct: 421 ITVTDLGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALPIGSVSATDRDS 480
Query: 479 GINAQVTYSLLPPQDPHLPLSSLVSINADNGHLFALRSLDYEALQSFEFRVGATDRGSPA 538
G NAQV YSLLP QDPHLPL+SLVSINADNGHLFALRSLDYEALQ+FEFRVGATDRGSPA
Sbjct: 481 GTNAQVIYSLLPSQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPA 540
Query: 539 LSSEALVRLLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 598
LSSEALVR+LVLDANDNSPFVLYPLQN SAPCTE +PRAAEPGYLVTKVVAVDGDSGQNA
Sbjct: 541 LSSEALVRVLVLDANDNSPFVLYPLQNSSAPCTEPLPRAAEPGYLVTKVVAVDGDSGQNA 600
Query: 599 WLSYQLLKATELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV 658
WLSYQLLKATE GLFGVWAHNGEVRTARLLSERDAAK RLVVLVKDNGEPPRSATATLHV
Sbjct: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHV 660
Query: 659 LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 718
LLVDGFSQPYL LPEAAP QA+SLTVYLVVALASVSSLFL SVLLFVAVRLCRRSRAA
Sbjct: 661 LLVDGFSQPYLRLPEAAP--DQANSLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAA 718
Query: 719 SVGRYSVPEGPFPGHLVDVSGTGTLSQSYQYKVCLTGGSETNEFKFLKPIMPNFPPQGTE 778
VGR SVPEGPFP HLVD+SGTGTLSQSYQY+VCLTGGS TNEFKFLKPI+PN PQ T
Sbjct: 719 PVGRCSVPEGPFPRHLVDLSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNLLPQSTG 778
Query: 779 REMEETPTSRNSFPF 793
RE+EE +N+ F
Sbjct: 779 REVEENRPFQNNLGF 793
>gi|14195607 protocadherin beta 1 precursor [Homo sapiens]
Length = 818
Score = 769 bits (1985), Expect = 0.0
Identities = 401/781 (51%), Positives = 547/781 (70%), Gaps = 7/781 (0%)
Query: 9 KKRQVAFFILLMLWGEVGSESIQYSVLEETESGTFVANLTKDLGLRVGELASRGARVVFK 68
+ RQV ++ + + +I+YSV EE ESG+FVAN+ KDLGL VG+LA+RGAR+V +
Sbjct: 10 QNRQVGSLLIFLCISVGDATTIRYSVAEEMESGSFVANVAKDLGLEVGKLAARGARLVSE 69
Query: 69 GNRQHLQFDPQTHDLLLNEKLDREELCGSTEPCVLPFQVLLENPLQFFQASLRVRDINDH 128
GN+ H + +T DL + EKLDRE LCG +PCVL F+V+L PLQ F+A +RV DIND+
Sbjct: 70 GNKMHFRLHRKTGDLFVKEKLDRESLCGKADPCVLHFEVVLVEPLQSFRAEVRVFDINDN 129
Query: 129 APEFPAREMLLKISEITMPGKIFPLKMAHDLDTGSNGLQRYTISSNPHFHVLTRNRSEGR 188
AP F +E LLKI E T G FPL+ A DLD G NGLQ YT+S+N +FH+ TR S G
Sbjct: 130 APVFLNKEPLLKIPESTPLGSRFPLQSAQDLDVGLNGLQNYTLSANGYFHLHTRFCSHGP 189
Query: 189 KFPELVLDKPLDREEQPQLRLTLIALDGGSPPRSGTSEIQIQVLDINDNVPEFAQELYEA 248
K+ ELVL+KPLDREEQP++ LT+ A+DGGSPP+SGT+ I + VLD+ND+VP+F++ +Y A
Sbjct: 190 KYAELVLNKPLDREEQPEVNLTITAVDGGSPPKSGTAHIHVVVLDVNDHVPQFSRLVYRA 249
Query: 249 QVPENNPLGSLVITVSARDLDAGSFGKVSYALFQVDD-VNQPFEINAITGEIRLRKALDF 307
QV EN+P GSLV TV+A DLD G+ ++Y+L Q + + + F+I+ GE+RLR LDF
Sbjct: 250 QVSENSPNGSLVATVTAVDLDEGTNKAITYSLAQNPEAILKTFQIDPQNGEVRLRGPLDF 309
Query: 308 EEIQSYDVDVEATDGGGLSGKCSLVVRVLDVNDNAPELTMSFFISLIPENLPEITV-AVF 366
E I++YD+D++ATDGGGLS ++V V+DVNDN PE+ +S S +PE+ P TV A+F
Sbjct: 310 EAIETYDIDIQATDGGGLSAHSKVLVEVVDVNDNPPEVMVSSVSSPLPEDSPPQTVVALF 369
Query: 367 SVSDADSGHNQQVICSIENNLPFLLRPSVENFYTLVTEGALDRESRAEYNITITVTDLGT 426
++ D D +V C + +LPF+++P+ N Y+LVT+ +LDRE + YNITI D G
Sbjct: 370 TIRDRDIRVGGKVTCFLREDLPFVIKPTFGNSYSLVTDRSLDREEVSGYNITIVAMDTGP 429
Query: 427 PRLKTQQSITVQVSDVNDNVPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGINAQVTY 486
P L + I V +SDVNDN P F + SY L VRENNSPA+ IG V A D D G NAQ+TY
Sbjct: 430 PSLSAETMIEVLISDVNDNPPIFREDSYILTVRENNSPAVFIGKVHAEDLDLGENAQITY 489
Query: 487 SLLPPQDPHLPLSSLVSINADNGHLFALRSLDYEALQSFEFRVGATDRGSPALSSEALVR 546
SLLPP++ L + + +SIN+ NG L+ALR++DYEA+Q F+F V ATD G +LSS+ VR
Sbjct: 490 SLLPPKNGDLSVFAYISINSGNGKLYALRTMDYEAIQDFQFVVKATDGGFLSLSSQVTVR 549
Query: 547 LLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK 606
++VLD NDN P +LYPLQNG+ PC +LVPR+AE GYLVTKVVAVDGDSGQN+WLSY LLK
Sbjct: 550 VVVLDDNDNRPMILYPLQNGTLPCNDLVPRSAEAGYLVTKVVAVDGDSGQNSWLSYHLLK 609
Query: 607 ATELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQ 666
AT+LGLF V NGE+ T R +SERD +L++LV+D+G+P S T +L++LLVDGFS+
Sbjct: 610 ATDLGLFSVQRQNGEIHTLRQISERDPMMQKLIILVQDHGQPALSTTVSLNILLVDGFSE 669
Query: 667 PYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSR---AASVGRY 723
PYL + + + T YLV++L +S LFL SV++ + + ++ + ++ +
Sbjct: 670 PYLQFQDPTKHSRKVNPSTKYLVISLVILSFLFLLSVIVIFIIHVYQKIKYREKFTIQEH 729
Query: 724 SVPEGPFPGHLVDVSGTGTLSQSYQYKVCLTGGSETNEFKFLKPIMPNFP-PQGT-EREM 781
+ F +LV G G+LS+ Y++C G+ +EF+FLK MPNFP P T E +M
Sbjct: 730 FYDDCNFSNNLVQGQGNGSLSRPCPYEMCSATGTGNSEFRFLKRFMPNFPFPHATGEIKM 789
Query: 782 E 782
E
Sbjct: 790 E 790
>gi|11056032 protocadherin gamma subfamily A, 1 isoform 1 precursor
[Homo sapiens]
Length = 931
Score = 647 bits (1670), Expect = 0.0
Identities = 360/771 (46%), Positives = 478/771 (61%), Gaps = 5/771 (0%)
Query: 2 MQTKVQNKKRQVAFFILLMLWGEVGSESIQYSVLEETESGTFVANLTKDLGLRVGELASR 61
+Q K+ R + + L L E G+ +I YSV EET+ G+FV N+ KDLGL+ ELA
Sbjct: 3 IQKKLTGCSRLMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADG 62
Query: 62 GARVVFKGNRQHLQFDPQTHDLLLNEKLDREELCGSTEPCVLPFQVLLENPLQFFQASLR 121
G R+V +G +P++ L+ ++DREELC + PC++ F +L+E+ ++ F +
Sbjct: 63 GVRIVSRGRMPLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVE 122
Query: 122 VRDINDHAPEFPAREMLLKISEITMPGKIFPLKMAHDLDTGSNGLQRYTISSNPHFHVLT 181
+ DIND+ P+F E+ K++EIT PG L DLD G N LQ Y +SSNPHF +
Sbjct: 123 IIDINDNTPQFQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDV 182
Query: 182 RNRSEGRKFPELVLDKPLDREEQPQLRLTLIALDGGSPPRSGTSEIQIQVLDINDNVPEF 241
+ ++G + PE+VL PLDREE+ L L A DGG P RSGT I IQV+D NDN P F
Sbjct: 183 QQGADGPQHPEMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAF 242
Query: 242 AQELYEAQVPENNPLGSLVITVSARDLDAGSFGKVSYALFQVDD-VNQPFEINAITGEIR 300
Q Y VPEN PLG+ ++ V+A D D G+ G+V+Y+ VD V Q F +++ TGEI
Sbjct: 243 TQAQYHINVPENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEIS 302
Query: 301 LRKALDFEEIQSYDVDVEATDGGGLSGKCSLVVRVLDVNDNAPELTMSFFISLIPENLPE 360
++ LDFEE + Y ++V+A DG GL K ++++VLDVNDNAPE+T++ + +PEN P
Sbjct: 303 NKEPLDFEEYKMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPP 362
Query: 361 IT-VAVFSVSDADSGHNQQVICSIENNLPFLLRPSVENFYTLVTEGALDRESRAEYNITI 419
T +A+ SV D DSG N C I NLPF L V+N+Y LVTE LDRE + YNITI
Sbjct: 363 GTIIALISVHDQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITI 422
Query: 420 TVTDLGTPRLKTQQSITVQVSDVNDNVPAFTQTSYTLFVRENNSPALHIGSVSATDRDSG 479
T D GTP L T+ I++ V+D+NDN P F Q SY+ ++ ENN I SV A D DS
Sbjct: 423 TAIDQGTPALSTETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSN 482
Query: 480 INAQVTYSLLPPQDPHLPLSSLVSINADNGHLFALRSLDYEALQSFEFRVGATDRGSPAL 539
NAQ+TYSL+ PLS+ +SIN+D G L+ALRS DYE + + +V A D G P L
Sbjct: 483 ENAQITYSLIEDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPL 542
Query: 540 SSEALVRLLVLDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 598
SS + L +LD NDN+P +LYP L + EL P +AEPGYLVTKVVAVD DSGQNA
Sbjct: 543 SSNVSLSLFLLDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNA 602
Query: 599 WLSYQLLKATELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV 658
WLSY+LLKA+E GLF V H GEVRTAR L +RDA K LVV V+D+G+PP SAT TL V
Sbjct: 603 WLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTV 662
Query: 659 LLVDGFSQPYLPLPEAAPAQAQADS-LTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRA 717
+ D S L P+ DS LT+YLVVA A+VS +FL V++ +A RL R ++
Sbjct: 663 AVADRISDILADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKS 722
Query: 718 ASVGRYSVPEGPFPG-HLVDVSGTGTLSQSYQYKVCLTGGSETNEFKFLKP 767
+ PG H V V G Q+Y ++V LT S + F +P
Sbjct: 723 RLLQASGGGLASMPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQP 773
>gi|14196459 protocadherin gamma subfamily A, 1 isoform 2 precursor
[Homo sapiens]
Length = 823
Score = 647 bits (1670), Expect = 0.0
Identities = 360/771 (46%), Positives = 478/771 (61%), Gaps = 5/771 (0%)
Query: 2 MQTKVQNKKRQVAFFILLMLWGEVGSESIQYSVLEETESGTFVANLTKDLGLRVGELASR 61
+Q K+ R + + L L E G+ +I YSV EET+ G+FV N+ KDLGL+ ELA
Sbjct: 3 IQKKLTGCSRLMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADG 62
Query: 62 GARVVFKGNRQHLQFDPQTHDLLLNEKLDREELCGSTEPCVLPFQVLLENPLQFFQASLR 121
G R+V +G +P++ L+ ++DREELC + PC++ F +L+E+ ++ F +
Sbjct: 63 GVRIVSRGRMPLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVE 122
Query: 122 VRDINDHAPEFPAREMLLKISEITMPGKIFPLKMAHDLDTGSNGLQRYTISSNPHFHVLT 181
+ DIND+ P+F E+ K++EIT PG L DLD G N LQ Y +SSNPHF +
Sbjct: 123 IIDINDNTPQFQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDV 182
Query: 182 RNRSEGRKFPELVLDKPLDREEQPQLRLTLIALDGGSPPRSGTSEIQIQVLDINDNVPEF 241
+ ++G + PE+VL PLDREE+ L L A DGG P RSGT I IQV+D NDN P F
Sbjct: 183 QQGADGPQHPEMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAF 242
Query: 242 AQELYEAQVPENNPLGSLVITVSARDLDAGSFGKVSYALFQVDD-VNQPFEINAITGEIR 300
Q Y VPEN PLG+ ++ V+A D D G+ G+V+Y+ VD V Q F +++ TGEI
Sbjct: 243 TQAQYHINVPENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEIS 302
Query: 301 LRKALDFEEIQSYDVDVEATDGGGLSGKCSLVVRVLDVNDNAPELTMSFFISLIPENLPE 360
++ LDFEE + Y ++V+A DG GL K ++++VLDVNDNAPE+T++ + +PEN P
Sbjct: 303 NKEPLDFEEYKMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPP 362
Query: 361 IT-VAVFSVSDADSGHNQQVICSIENNLPFLLRPSVENFYTLVTEGALDRESRAEYNITI 419
T +A+ SV D DSG N C I NLPF L V+N+Y LVTE LDRE + YNITI
Sbjct: 363 GTIIALISVHDQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITI 422
Query: 420 TVTDLGTPRLKTQQSITVQVSDVNDNVPAFTQTSYTLFVRENNSPALHIGSVSATDRDSG 479
T D GTP L T+ I++ V+D+NDN P F Q SY+ ++ ENN I SV A D DS
Sbjct: 423 TAIDQGTPALSTETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSN 482
Query: 480 INAQVTYSLLPPQDPHLPLSSLVSINADNGHLFALRSLDYEALQSFEFRVGATDRGSPAL 539
NAQ+TYSL+ PLS+ +SIN+D G L+ALRS DYE + + +V A D G P L
Sbjct: 483 ENAQITYSLIEDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPL 542
Query: 540 SSEALVRLLVLDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 598
SS + L +LD NDN+P +LYP L + EL P +AEPGYLVTKVVAVD DSGQNA
Sbjct: 543 SSNVSLSLFLLDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNA 602
Query: 599 WLSYQLLKATELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV 658
WLSY+LLKA+E GLF V H GEVRTAR L +RDA K LVV V+D+G+PP SAT TL V
Sbjct: 603 WLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTV 662
Query: 659 LLVDGFSQPYLPLPEAAPAQAQADS-LTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRA 717
+ D S L P+ DS LT+YLVVA A+VS +FL V++ +A RL R ++
Sbjct: 663 AVADRISDILADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKS 722
Query: 718 ASVGRYSVPEGPFPG-HLVDVSGTGTLSQSYQYKVCLTGGSETNEFKFLKP 767
+ PG H V V G Q+Y ++V LT S + F +P
Sbjct: 723 RLLQASGGGLASMPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQP 773
>gi|11056030 protocadherin gamma subfamily A, 2 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 639 bits (1648), Expect = 0.0
Identities = 355/765 (46%), Positives = 475/765 (62%), Gaps = 8/765 (1%)
Query: 9 KKRQVAFFILLMLWGEVGSESIQYSVLEETESGTFVANLTKDLGLRVGELASRGARVVFK 68
+K + F+L LW E + I+YSV EE + G+FV N+ KDLGL LA +G R+V +
Sbjct: 11 RKLVLLCFLLATLW-EARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALAEQGVRIVSR 69
Query: 69 GNRQHLQFDPQTHDLLLNEKLDREELCGSTEPCVLPFQVLLENPLQFFQASLRVRDINDH 128
G Q +P++ L+ ++DREELC + PC+L F +LLE+ L + + + DIND+
Sbjct: 70 GRSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVEVEITDINDN 129
Query: 129 APEFPAREMLLKISEITMPGKIFPLKMAHDLDTGSNGLQRYTISSNPHFHVLTRNRSEGR 188
AP F E+ LKISE T PG PLK AHD D G N LQ+Y ++ N HF + R ++G
Sbjct: 130 APRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSLDVRRGADGN 189
Query: 189 KFPELVLDKPLDREEQPQLRLTLIALDGGSPPRSGTSEIQIQVLDINDNVPEFAQELYEA 248
K+PELVL++ LDREE+ L L+A DGG P SGTS I ++VLD NDN P F Q Y
Sbjct: 190 KYPELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAPVFTQPEYRI 249
Query: 249 QVPENNPLGSLVITVSARDLDAGSFGKVSYALFQ-VDDVNQPFEINAITGEIRLRKALDF 307
+PEN +G+ ++TV+A D D G + +V Y L + + ++ FE+ + +GE+ + K LD+
Sbjct: 250 SIPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGELTIIKDLDY 309
Query: 308 EEIQSYDVDVEATDGGGLSGKCSLVVRVLDVNDNAPELTMSFFISLIPE-NLPEITVAVF 366
E+ +++D+EA DG GL + ++V VLDVNDNAPE M+ S + E +LP + +F
Sbjct: 310 EDATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDSLPGTIIGLF 369
Query: 367 SVSDADSGHNQQVICSIENNLPFLLRPSVENFYTLVTEGALDRESRAEYNITITVTDLGT 426
+V D DSG N CS+ +LPF L SV+N+Y LVT ALDRE + YNIT+T D G
Sbjct: 370 NVHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNITLTAKDGGN 429
Query: 427 PRLKTQQSITVQVSDVNDNVPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGINAQVTY 486
P L T I +QV+D+NDN PAF++TSY+ ++ ENN + SV+A D DS NA VTY
Sbjct: 430 PSLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPDSNDNAHVTY 489
Query: 487 SLLPPQDPHLPLSSLVSINADNGHLFALRSLDYEALQSFEFRVGATDRGSPALSSEALVR 546
S PLSS +SIN+D G L+ALRS DYE L+ + V A D G+P LSS +
Sbjct: 490 SFAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNPPLSSNVSLS 549
Query: 547 LLVLDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLL 605
L VLD NDN+P +LYP + EL PR+AEPGYLVTKVVAVD DSGQNAWLSY LL
Sbjct: 550 LFVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYHLL 609
Query: 606 KATELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFS 665
KA+E GLF V H GEVRTAR L +RDA K LVV ++D+G+PP SAT TL V + D
Sbjct: 610 KASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTLTVAVADRIP 669
Query: 666 QPYLPLPEAAPAQAQADS-LTVYLVVALASVSSLFLFSVLLFVAVRLCR--RSRAASVGR 722
L P+ DS LT+YLVVA+A+VS +FL V++ +A RL R +SR
Sbjct: 670 DILADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASG 729
Query: 723 YSVPEGPFPGHLVDVSGTGTLSQSYQYKVCLTGGSETNEFKFLKP 767
S+ G H V V G Q+Y ++V LT S + F +P
Sbjct: 730 GSL-TGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQP 773
>gi|14196462 protocadherin gamma subfamily A, 2 isoform 2 precursor
[Homo sapiens]
Length = 823
Score = 639 bits (1648), Expect = 0.0
Identities = 355/765 (46%), Positives = 475/765 (62%), Gaps = 8/765 (1%)
Query: 9 KKRQVAFFILLMLWGEVGSESIQYSVLEETESGTFVANLTKDLGLRVGELASRGARVVFK 68
+K + F+L LW E + I+YSV EE + G+FV N+ KDLGL LA +G R+V +
Sbjct: 11 RKLVLLCFLLATLW-EARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALAEQGVRIVSR 69
Query: 69 GNRQHLQFDPQTHDLLLNEKLDREELCGSTEPCVLPFQVLLENPLQFFQASLRVRDINDH 128
G Q +P++ L+ ++DREELC + PC+L F +LLE+ L + + + DIND+
Sbjct: 70 GRSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVEVEITDINDN 129
Query: 129 APEFPAREMLLKISEITMPGKIFPLKMAHDLDTGSNGLQRYTISSNPHFHVLTRNRSEGR 188
AP F E+ LKISE T PG PLK AHD D G N LQ+Y ++ N HF + R ++G
Sbjct: 130 APRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSLDVRRGADGN 189
Query: 189 KFPELVLDKPLDREEQPQLRLTLIALDGGSPPRSGTSEIQIQVLDINDNVPEFAQELYEA 248
K+PELVL++ LDREE+ L L+A DGG P SGTS I ++VLD NDN P F Q Y
Sbjct: 190 KYPELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAPVFTQPEYRI 249
Query: 249 QVPENNPLGSLVITVSARDLDAGSFGKVSYALFQ-VDDVNQPFEINAITGEIRLRKALDF 307
+PEN +G+ ++TV+A D D G + +V Y L + + ++ FE+ + +GE+ + K LD+
Sbjct: 250 SIPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGELTIIKDLDY 309
Query: 308 EEIQSYDVDVEATDGGGLSGKCSLVVRVLDVNDNAPELTMSFFISLIPE-NLPEITVAVF 366
E+ +++D+EA DG GL + ++V VLDVNDNAPE M+ S + E +LP + +F
Sbjct: 310 EDATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDSLPGTIIGLF 369
Query: 367 SVSDADSGHNQQVICSIENNLPFLLRPSVENFYTLVTEGALDRESRAEYNITITVTDLGT 426
+V D DSG N CS+ +LPF L SV+N+Y LVT ALDRE + YNIT+T D G
Sbjct: 370 NVHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNITLTAKDGGN 429
Query: 427 PRLKTQQSITVQVSDVNDNVPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGINAQVTY 486
P L T I +QV+D+NDN PAF++TSY+ ++ ENN + SV+A D DS NA VTY
Sbjct: 430 PSLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPDSNDNAHVTY 489
Query: 487 SLLPPQDPHLPLSSLVSINADNGHLFALRSLDYEALQSFEFRVGATDRGSPALSSEALVR 546
S PLSS +SIN+D G L+ALRS DYE L+ + V A D G+P LSS +
Sbjct: 490 SFAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNPPLSSNVSLS 549
Query: 547 LLVLDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLL 605
L VLD NDN+P +LYP + EL PR+AEPGYLVTKVVAVD DSGQNAWLSY LL
Sbjct: 550 LFVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYHLL 609
Query: 606 KATELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFS 665
KA+E GLF V H GEVRTAR L +RDA K LVV ++D+G+PP SAT TL V + D
Sbjct: 610 KASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTLTVAVADRIP 669
Query: 666 QPYLPLPEAAPAQAQADS-LTVYLVVALASVSSLFLFSVLLFVAVRLCR--RSRAASVGR 722
L P+ DS LT+YLVVA+A+VS +FL V++ +A RL R +SR
Sbjct: 670 DILADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASG 729
Query: 723 YSVPEGPFPGHLVDVSGTGTLSQSYQYKVCLTGGSETNEFKFLKP 767
S+ G H V V G Q+Y ++V LT S + F +P
Sbjct: 730 GSL-TGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQP 773
>gi|11128043 protocadherin gamma subfamily A, 9 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 630 bits (1626), Expect = e-180
Identities = 362/774 (46%), Positives = 478/774 (61%), Gaps = 15/774 (1%)
Query: 4 TKVQNKKRQVAFFILL-MLWGEVGSESIQYSVLEETESGTFVANLTKDLGLRVGELASRG 62
TK Q + R V LL MLW E + I+YSV EETE G V N++KDL L ELA R
Sbjct: 5 TKCQLRGRLVLLCSLLGMLW-EARASQIRYSVPEETEKGYIVGNISKDLALEPRELAERR 63
Query: 63 ARVVFKGNRQHLQFDPQTHDLLLNEKLDREELCGSTEPCVLPFQVLLENPLQFFQASLRV 122
R+V +G Q +P++ L+ ++DREELC + C++ F+VL+E+ ++ + + V
Sbjct: 64 VRIVSRGRTQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIEIEV 123
Query: 123 RDINDHAPEFPAREMLLKISEITMPGKIFPLKMAHDLDTGSNGLQRYTISSNPHFHVLTR 182
DIND AP+F A + +KI+EI +PG +PL A D D G N LQ Y +S N HF + +
Sbjct: 124 TDINDSAPKFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSLNVQ 183
Query: 183 NRSEGRKFPELVLDKPLDREEQPQLRLTLIALDGGSPPRSGTSEIQIQVLDINDNVPEFA 242
G PELVL++ LDREE L L A DGG P RS T I + VLD NDN P FA
Sbjct: 184 TGDNGAINPELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPVFA 243
Query: 243 QELYEAQVPENNPLGSLVITVSARDLDAGSFGKVSYALFQVDDVNQ-PFEINAITGEIRL 301
Q +Y +V EN P G+ ++T +A DLD G GKV+Y +++++ F++N TGEI
Sbjct: 244 QRIYRVKVLENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGEIST 303
Query: 302 RKALDFEEIQSYDVDVEATDGGGLSGKCSLVVRVLDVNDNAPELTMSFFISLIPENLPEI 361
K+LD+EE Y+++++A DGGGL G +++ V DVNDN PE+T++ S + E+ P+
Sbjct: 304 AKSLDYEECSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDAPQG 363
Query: 362 TV-AVFSVSDADSGHNQQVICSIENNLPFLLRPSVENFYTLVTEGALDRESRAEYNITIT 420
TV +F+ D DSG N QV+CSI+ NL F L S E++Y L+T LDRE +EYNIT+T
Sbjct: 364 TVILLFNAHDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNITVT 423
Query: 421 VTDLGTPRLKTQQSITVQVSDVNDNVPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGI 480
TD GTP L T+ IT+QV+D+NDN PAF+Q SY++++ ENN+ I SV A D DS
Sbjct: 424 ATDRGTPPLSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPDSNE 483
Query: 481 NAQVTYSLLPPQDPHLPLSSLVSINADNGHLFALRSLDYEALQSFEFRVGATDRGSPALS 540
N++V YSL PLS+ VSIN+D G L+AL S DYE + + +V A+D GSP LS
Sbjct: 484 NSRVIYSLAEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSPPLS 543
Query: 541 SEALVRLLVLDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAW 599
S +RL VLD NDN+P +LYP L + EL PR+AEPGYLVTKVVAVD DSGQNAW
Sbjct: 544 SNVSLRLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAW 603
Query: 600 LSYQLLKATELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVL 659
LSY+L KA+E GLF V H GEVRTAR L +RDA K LVV V+D+G+PP SAT TL V
Sbjct: 604 LSYRLFKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVA 663
Query: 660 LVDGFSQPYLPLPE-AAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRL-----CR 713
+ D L PA +A LT+YLVVA+A VS +FL V+ +A+RL
Sbjct: 664 IADSIPDILADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWHSSH 723
Query: 714 RSRAASVGRYSVPEGPFPGHLVDVSGTGTLSQSYQYKVCLTGGSETNEFKFLKP 767
RA S G VP H V V G Q+Y + LT S + F +P
Sbjct: 724 LLRATSDGLAGVP----TSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQP 773
>gi|14270487 protocadherin gamma subfamily A, 9 isoform 2 precursor
[Homo sapiens]
Length = 828
Score = 630 bits (1626), Expect = e-180
Identities = 362/774 (46%), Positives = 478/774 (61%), Gaps = 15/774 (1%)
Query: 4 TKVQNKKRQVAFFILL-MLWGEVGSESIQYSVLEETESGTFVANLTKDLGLRVGELASRG 62
TK Q + R V LL MLW E + I+YSV EETE G V N++KDL L ELA R
Sbjct: 5 TKCQLRGRLVLLCSLLGMLW-EARASQIRYSVPEETEKGYIVGNISKDLALEPRELAERR 63
Query: 63 ARVVFKGNRQHLQFDPQTHDLLLNEKLDREELCGSTEPCVLPFQVLLENPLQFFQASLRV 122
R+V +G Q +P++ L+ ++DREELC + C++ F+VL+E+ ++ + + V
Sbjct: 64 VRIVSRGRTQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIEIEV 123
Query: 123 RDINDHAPEFPAREMLLKISEITMPGKIFPLKMAHDLDTGSNGLQRYTISSNPHFHVLTR 182
DIND AP+F A + +KI+EI +PG +PL A D D G N LQ Y +S N HF + +
Sbjct: 124 TDINDSAPKFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSLNVQ 183
Query: 183 NRSEGRKFPELVLDKPLDREEQPQLRLTLIALDGGSPPRSGTSEIQIQVLDINDNVPEFA 242
G PELVL++ LDREE L L A DGG P RS T I + VLD NDN P FA
Sbjct: 184 TGDNGAINPELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPVFA 243
Query: 243 QELYEAQVPENNPLGSLVITVSARDLDAGSFGKVSYALFQVDDVNQ-PFEINAITGEIRL 301
Q +Y +V EN P G+ ++T +A DLD G GKV+Y +++++ F++N TGEI
Sbjct: 244 QRIYRVKVLENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGEIST 303
Query: 302 RKALDFEEIQSYDVDVEATDGGGLSGKCSLVVRVLDVNDNAPELTMSFFISLIPENLPEI 361
K+LD+EE Y+++++A DGGGL G +++ V DVNDN PE+T++ S + E+ P+
Sbjct: 304 AKSLDYEECSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDAPQG 363
Query: 362 TV-AVFSVSDADSGHNQQVICSIENNLPFLLRPSVENFYTLVTEGALDRESRAEYNITIT 420
TV +F+ D DSG N QV+CSI+ NL F L S E++Y L+T LDRE +EYNIT+T
Sbjct: 364 TVILLFNAHDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNITVT 423
Query: 421 VTDLGTPRLKTQQSITVQVSDVNDNVPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGI 480
TD GTP L T+ IT+QV+D+NDN PAF+Q SY++++ ENN+ I SV A D DS
Sbjct: 424 ATDRGTPPLSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPDSNE 483
Query: 481 NAQVTYSLLPPQDPHLPLSSLVSINADNGHLFALRSLDYEALQSFEFRVGATDRGSPALS 540
N++V YSL PLS+ VSIN+D G L+AL S DYE + + +V A+D GSP LS
Sbjct: 484 NSRVIYSLAEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSPPLS 543
Query: 541 SEALVRLLVLDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAW 599
S +RL VLD NDN+P +LYP L + EL PR+AEPGYLVTKVVAVD DSGQNAW
Sbjct: 544 SNVSLRLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAW 603
Query: 600 LSYQLLKATELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVL 659
LSY+L KA+E GLF V H GEVRTAR L +RDA K LVV V+D+G+PP SAT TL V
Sbjct: 604 LSYRLFKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVA 663
Query: 660 LVDGFSQPYLPLPE-AAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRL-----CR 713
+ D L PA +A LT+YLVVA+A VS +FL V+ +A+RL
Sbjct: 664 IADSIPDILADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWHSSH 723
Query: 714 RSRAASVGRYSVPEGPFPGHLVDVSGTGTLSQSYQYKVCLTGGSETNEFKFLKP 767
RA S G VP H V V G Q+Y + LT S + F +P
Sbjct: 724 LLRATSDGLAGVP----TSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQP 773
>gi|14589880 protocadherin gamma subfamily A, 3 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 626 bits (1615), Expect = e-179
Identities = 347/753 (46%), Positives = 472/753 (62%), Gaps = 13/753 (1%)
Query: 24 EVGSESIQYSVLEETESGTFVANLTKDLGLRVGELASRGARVVFKGNRQHLQFDPQTHDL 83
E GS I+YSV EE + G+FV N+ DLGL ELA RG R+V +G Q +PQ+ L
Sbjct: 25 ETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRGRTQLFSLNPQSGSL 84
Query: 84 LLNEKLDREELCGSTEPCVLPFQVLLENPLQFFQASLRVRDINDHAPEFPAREMLLKISE 143
+ E++DREELC C++ +L+E+ L+ F+ + ++DIND+AP FP E+ +KI E
Sbjct: 85 VTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNAPNFPTEELEIKIGE 144
Query: 144 ITMPGKIFPLKMAHDLDTGSNGLQRYTISSNPHFHVLTRNRSEGRKFPELVLDKPLDREE 203
+T+PG FP+K A D D G N LQ Y +S N +F + + SEG K+PELVL++ LDRE+
Sbjct: 145 LTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAKYPELVLERALDREK 204
Query: 204 QPQLRLTLIALDGGSPPRSGTSEIQIQVLDINDNVPEFAQELYEAQVPENNPLGSLVITV 263
+ +L L+A DGG P SG IQ+ VLD NDN P F Q Y V EN P+G+ ++TV
Sbjct: 205 KEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVWENVPVGTRLLTV 264
Query: 264 SARDLDAGSFGKVSYALFQV-DDVNQPFEINAITGEIRLRKALDFEEIQSYDVDVEATDG 322
+A D D G +VSY L ++ + + F +N+++GE+ + K+LD+E+ Y++ +EA DG
Sbjct: 265 NATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDAMFYEIKIEAQDG 324
Query: 323 GGLSGKCSLVVRVLDVNDNAPELTMSFFISLIP-ENLPEITVAVFSVSDADSGHNQQVIC 381
GL + ++V VLDVNDNAPE+T++ S +P E +A+ V D DSG N QV
Sbjct: 325 PGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALIDVHDRDSGQNGQVEV 384
Query: 382 SIENNLPFLLRPSVENFYTLVTEGALDRESRAEYNITITVTDLGTPRLKTQQSITVQVSD 441
+ NLPF L S++ +Y LVT +LDRE +EYNI++ +D G+P L T+ IT+ V D
Sbjct: 385 FVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSPPLSTETHITLHVID 444
Query: 442 VNDNVPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGINAQVTYSLLPPQDPHLPLSSL 501
+NDN P F SY+ ++ ENN I SV+A D DS NA++TY+L PLSS
Sbjct: 445 INDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYALTEDTLQGAPLSSF 504
Query: 502 VSINADNGHLFALRSLDYEALQSFEFRVGATDRGSPALSSEALVRLLVLDANDNSPFVLY 561
VSIN++ G L+ALRS DYE + + V A+D G+P LSS + L VLD NDN+P +LY
Sbjct: 505 VSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNLFVLDQNDNAPEILY 564
Query: 562 P-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATELGLFGVWAHNG 620
P L + EL PR+AEPGYLVTKVVAVD DSGQNAWLSY+LLKA+E GLF V H G
Sbjct: 565 PALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFSVGLHTG 624
Query: 621 EVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQPYLPLPEAAPAQAQ 680
EVRTAR L +RDA K LVV V+D+G+PP SAT TL V + D L P+
Sbjct: 625 EVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDILADLGSLEPSAKP 684
Query: 681 ADS-LTVYLVVALASVSSLFLFSVLLFVAVRLCR--RSR---AASVGRYSVPEGPFPGHL 734
DS LT+YLVVA+A+VS +FL V++ +A+RL R +SR A+ G S P H
Sbjct: 685 NDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGGGLASTP----GSHF 740
Query: 735 VDVSGTGTLSQSYQYKVCLTGGSETNEFKFLKP 767
V G Q+Y ++V LT S + F +P
Sbjct: 741 VGADGVRAFLQTYSHEVSLTADSRKSHLIFPQP 773
>gi|14196465 protocadherin gamma subfamily A, 3 isoform 2 precursor
[Homo sapiens]
Length = 829
Score = 626 bits (1615), Expect = e-179
Identities = 347/753 (46%), Positives = 472/753 (62%), Gaps = 13/753 (1%)
Query: 24 EVGSESIQYSVLEETESGTFVANLTKDLGLRVGELASRGARVVFKGNRQHLQFDPQTHDL 83
E GS I+YSV EE + G+FV N+ DLGL ELA RG R+V +G Q +PQ+ L
Sbjct: 25 ETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRGRTQLFSLNPQSGSL 84
Query: 84 LLNEKLDREELCGSTEPCVLPFQVLLENPLQFFQASLRVRDINDHAPEFPAREMLLKISE 143
+ E++DREELC C++ +L+E+ L+ F+ + ++DIND+AP FP E+ +KI E
Sbjct: 85 VTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNAPNFPTEELEIKIGE 144
Query: 144 ITMPGKIFPLKMAHDLDTGSNGLQRYTISSNPHFHVLTRNRSEGRKFPELVLDKPLDREE 203
+T+PG FP+K A D D G N LQ Y +S N +F + + SEG K+PELVL++ LDRE+
Sbjct: 145 LTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAKYPELVLERALDREK 204
Query: 204 QPQLRLTLIALDGGSPPRSGTSEIQIQVLDINDNVPEFAQELYEAQVPENNPLGSLVITV 263
+ +L L+A DGG P SG IQ+ VLD NDN P F Q Y V EN P+G+ ++TV
Sbjct: 205 KEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVWENVPVGTRLLTV 264
Query: 264 SARDLDAGSFGKVSYALFQV-DDVNQPFEINAITGEIRLRKALDFEEIQSYDVDVEATDG 322
+A D D G +VSY L ++ + + F +N+++GE+ + K+LD+E+ Y++ +EA DG
Sbjct: 265 NATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDAMFYEIKIEAQDG 324
Query: 323 GGLSGKCSLVVRVLDVNDNAPELTMSFFISLIP-ENLPEITVAVFSVSDADSGHNQQVIC 381
GL + ++V VLDVNDNAPE+T++ S +P E +A+ V D DSG N QV
Sbjct: 325 PGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALIDVHDRDSGQNGQVEV 384
Query: 382 SIENNLPFLLRPSVENFYTLVTEGALDRESRAEYNITITVTDLGTPRLKTQQSITVQVSD 441
+ NLPF L S++ +Y LVT +LDRE +EYNI++ +D G+P L T+ IT+ V D
Sbjct: 385 FVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSPPLSTETHITLHVID 444
Query: 442 VNDNVPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGINAQVTYSLLPPQDPHLPLSSL 501
+NDN P F SY+ ++ ENN I SV+A D DS NA++TY+L PLSS
Sbjct: 445 INDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYALTEDTLQGAPLSSF 504
Query: 502 VSINADNGHLFALRSLDYEALQSFEFRVGATDRGSPALSSEALVRLLVLDANDNSPFVLY 561
VSIN++ G L+ALRS DYE + + V A+D G+P LSS + L VLD NDN+P +LY
Sbjct: 505 VSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNLFVLDQNDNAPEILY 564
Query: 562 P-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATELGLFGVWAHNG 620
P L + EL PR+AEPGYLVTKVVAVD DSGQNAWLSY+LLKA+E GLF V H G
Sbjct: 565 PALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFSVGLHTG 624
Query: 621 EVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQPYLPLPEAAPAQAQ 680
EVRTAR L +RDA K LVV V+D+G+PP SAT TL V + D L P+
Sbjct: 625 EVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDILADLGSLEPSAKP 684
Query: 681 ADS-LTVYLVVALASVSSLFLFSVLLFVAVRLCR--RSR---AASVGRYSVPEGPFPGHL 734
DS LT+YLVVA+A+VS +FL V++ +A+RL R +SR A+ G S P H
Sbjct: 685 NDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGGGLASTP----GSHF 740
Query: 735 VDVSGTGTLSQSYQYKVCLTGGSETNEFKFLKP 767
V G Q+Y ++V LT S + F +P
Sbjct: 741 VGADGVRAFLQTYSHEVSLTADSRKSHLIFPQP 773
>gi|11128041 protocadherin gamma subfamily A, 10 isoform 1 precursor
[Homo sapiens]
Length = 936
Score = 624 bits (1608), Expect = e-178
Identities = 348/752 (46%), Positives = 468/752 (62%), Gaps = 11/752 (1%)
Query: 24 EVGSESIQYSVLEETESGTFVANLTKDLGLRVGELASRGARVVFKGNRQHLQFDPQTHDL 83
E G+ I YS+ EE E G+FV N++KDLGL ELA RG R+V +G Q +P++ L
Sbjct: 29 EAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVSRGRTQLFSLNPRSGSL 88
Query: 84 LLNEKLDREELCGSTEPCVLPFQVLLENPLQFFQASLRVRDINDHAPEFPAREMLLKISE 143
+ ++DREELC + CV+ F +L+E+ ++ F + V DIND+AP+F A + +KI+E
Sbjct: 89 ITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDINDNAPKFQAENLDVKINE 148
Query: 144 ITMPGKIFPLKMAHDLDTGSNGLQRYTISSNPHFHVLTRNRSEGRKFPELVLDKPLDREE 203
G FPL A D D G N LQ Y +S N HF + ++R+ G K+PELVL+ LDREE
Sbjct: 149 NVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANGVKYPELVLEHSLDREE 208
Query: 204 QPQLRLTLIALDGGSPPRSGTSEIQIQVLDINDNVPEFAQELYEAQVPENNPLGSLVITV 263
+ L L A DGG P RSGT + + V D NDN P F Y VPEN P+G+ ++TV
Sbjct: 209 EAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYRVSVPENLPVGTQLLTV 268
Query: 264 SARDLDAGSFGKVSYALFQVDDVN-QPFEINAITGEIRLRKALDFEEIQSYDVDVEATDG 322
+A D D G+ G+V+Y+ ++ D F++N TGEI++ + LD+EE Y+++++A DG
Sbjct: 269 TATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLDYEETGFYEIEIQAEDG 328
Query: 323 GGLSGKCSLVVRVLDVNDNAPELTMSFFISLIPENLPEIT-VAVFSVSDADSGHNQQVIC 381
G +++ V DVNDN+PELT++ S + E+ P T VA+ +V D DS N QV C
Sbjct: 329 GAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVALLNVHDLDSEQNGQVTC 388
Query: 382 SIENNLPFLLRPSVENFYTLVTEGALDRESRAEYNITITVTDLGTPRLKTQQSITVQVSD 441
SI LPF L S++++Y LV ALDRE + YNIT+T TD G+P L T+ +QV+D
Sbjct: 389 SILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGGSPPLSTEAHFMLQVAD 448
Query: 442 VNDNVPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGINAQVTYSLLPPQDPHLPLSSL 501
+NDN P F+Q SY ++ ENN+ I SV+A D DS NAQ+ YSL +PLSS
Sbjct: 449 INDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQIIYSLAEDTIQGVPLSSY 508
Query: 502 VSINADNGHLFALRSLDYEALQSFEFRVGATDRGSPALSSEALVRLLVLDANDNSPFVLY 561
+SIN+D G L+ALRS DYE + +V A+D G P LSS + L VLD NDN+P +LY
Sbjct: 509 ISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSLSLFVLDQNDNAPEILY 568
Query: 562 P-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATELGLFGVWAHNG 620
P L + EL PR+AEPGYLVTKVVAVD DSGQNAWLSY+LLKA+E GLF V H G
Sbjct: 569 PALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFAVGEHTG 628
Query: 621 EVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQPYLPLPE-AAPAQA 679
EVRTAR L +RDA K LVV V+D+G+PP SAT TL V + D Q L +PA +
Sbjct: 629 EVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVLADLGSFESPANS 688
Query: 680 QADSLTVYLVVALASVSSLFLFSVLLFVAVRLCR----RSRAASVGRYSVPEGPFPGHLV 735
+ LT+YLVVA+A+VS +FL V++ +A RL R R AS G + G H V
Sbjct: 689 ETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGGLTGVSG---SHFV 745
Query: 736 DVSGTGTLSQSYQYKVCLTGGSETNEFKFLKP 767
V G Q+Y ++V LT S + F +P
Sbjct: 746 GVDGVRAFLQTYSHEVSLTADSRKSHLIFPQP 777
>gi|14196448 protocadherin gamma subfamily A, 10 isoform 2 precursor
[Homo sapiens]
Length = 850
Score = 624 bits (1608), Expect = e-178
Identities = 348/752 (46%), Positives = 468/752 (62%), Gaps = 11/752 (1%)
Query: 24 EVGSESIQYSVLEETESGTFVANLTKDLGLRVGELASRGARVVFKGNRQHLQFDPQTHDL 83
E G+ I YS+ EE E G+FV N++KDLGL ELA RG R+V +G Q +P++ L
Sbjct: 29 EAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVSRGRTQLFSLNPRSGSL 88
Query: 84 LLNEKLDREELCGSTEPCVLPFQVLLENPLQFFQASLRVRDINDHAPEFPAREMLLKISE 143
+ ++DREELC + CV+ F +L+E+ ++ F + V DIND+AP+F A + +KI+E
Sbjct: 89 ITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDINDNAPKFQAENLDVKINE 148
Query: 144 ITMPGKIFPLKMAHDLDTGSNGLQRYTISSNPHFHVLTRNRSEGRKFPELVLDKPLDREE 203
G FPL A D D G N LQ Y +S N HF + ++R+ G K+PELVL+ LDREE
Sbjct: 149 NVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANGVKYPELVLEHSLDREE 208
Query: 204 QPQLRLTLIALDGGSPPRSGTSEIQIQVLDINDNVPEFAQELYEAQVPENNPLGSLVITV 263
+ L L A DGG P RSGT + + V D NDN P F Y VPEN P+G+ ++TV
Sbjct: 209 EAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYRVSVPENLPVGTQLLTV 268
Query: 264 SARDLDAGSFGKVSYALFQVDDVN-QPFEINAITGEIRLRKALDFEEIQSYDVDVEATDG 322
+A D D G+ G+V+Y+ ++ D F++N TGEI++ + LD+EE Y+++++A DG
Sbjct: 269 TATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLDYEETGFYEIEIQAEDG 328
Query: 323 GGLSGKCSLVVRVLDVNDNAPELTMSFFISLIPENLPEIT-VAVFSVSDADSGHNQQVIC 381
G +++ V DVNDN+PELT++ S + E+ P T VA+ +V D DS N QV C
Sbjct: 329 GAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVALLNVHDLDSEQNGQVTC 388
Query: 382 SIENNLPFLLRPSVENFYTLVTEGALDRESRAEYNITITVTDLGTPRLKTQQSITVQVSD 441
SI LPF L S++++Y LV ALDRE + YNIT+T TD G+P L T+ +QV+D
Sbjct: 389 SILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGGSPPLSTEAHFMLQVAD 448
Query: 442 VNDNVPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGINAQVTYSLLPPQDPHLPLSSL 501
+NDN P F+Q SY ++ ENN+ I SV+A D DS NAQ+ YSL +PLSS
Sbjct: 449 INDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQIIYSLAEDTIQGVPLSSY 508
Query: 502 VSINADNGHLFALRSLDYEALQSFEFRVGATDRGSPALSSEALVRLLVLDANDNSPFVLY 561
+SIN+D G L+ALRS DYE + +V A+D G P LSS + L VLD NDN+P +LY
Sbjct: 509 ISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSLSLFVLDQNDNAPEILY 568
Query: 562 P-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATELGLFGVWAHNG 620
P L + EL PR+AEPGYLVTKVVAVD DSGQNAWLSY+LLKA+E GLF V H G
Sbjct: 569 PALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFAVGEHTG 628
Query: 621 EVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQPYLPLPE-AAPAQA 679
EVRTAR L +RDA K LVV V+D+G+PP SAT TL V + D Q L +PA +
Sbjct: 629 EVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVLADLGSFESPANS 688
Query: 680 QADSLTVYLVVALASVSSLFLFSVLLFVAVRLCR----RSRAASVGRYSVPEGPFPGHLV 735
+ LT+YLVVA+A+VS +FL V++ +A RL R R AS G + G H V
Sbjct: 689 ETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGGLTGVSG---SHFV 745
Query: 736 DVSGTGTLSQSYQYKVCLTGGSETNEFKFLKP 767
V G Q+Y ++V LT S + F +P
Sbjct: 746 GVDGVRAFLQTYSHEVSLTADSRKSHLIFPQP 777
>gi|11056065 protocadherin gamma subfamily A, 6 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 623 bits (1607), Expect = e-178
Identities = 351/770 (45%), Positives = 470/770 (61%), Gaps = 6/770 (0%)
Query: 3 QTKVQNKKRQVAFFILLMLWGEVGSESIQYSVLEETESGTFVANLTKDLGLRVGELASRG 62
Q Q ++ + +L LWG ++ I+YS+ EE E G+FV N+ KDLGL ELA G
Sbjct: 5 QRHPQRSEQVLLLTLLGTLWGAAAAQ-IRYSIPEELEKGSFVGNIVKDLGLEPQELAEHG 63
Query: 63 ARVVFKGNRQHLQFDPQTHDLLLNEKLDREELCGSTEPCVLPFQVLLENPLQFFQASLRV 122
R+V +G Q +P+ L+ ++DREELC + C++ F +L+E+ L + + +
Sbjct: 64 VRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVEVEI 123
Query: 123 RDINDHAPEFPAREMLLKISEITMPGKIFPLKMAHDLDTGSNGLQRYTISSNPHFHVLTR 182
DIND+ P F E+ +KI E P FPL +D D G N LQ + +S N HF V +
Sbjct: 124 VDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSVDVQ 183
Query: 183 NRSEGRKFPELVLDKPLDREEQPQLRLTLIALDGGSPPRSGTSEIQIQVLDINDNVPEFA 242
+ + G K+PELVL+ LDRE + RL L A+DGG P RS ++I + VLD+NDN P F
Sbjct: 184 SEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTPMFT 243
Query: 243 QELYEAQVPENNPLGSLVITVSARDLDAGSFGKVSYALFQV-DDVNQPFEINAITGEIRL 301
Q +Y VPEN P+G+ V+ V+A D D G G+V+Y+ ++ + ++Q F +N +TGEI
Sbjct: 244 QPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGEIST 303
Query: 302 RKALDFEEIQSYDVDVEATDGGGLSGKCSLVVRVLDVNDNAPELTMSFFISLIPENLPEI 361
LD+E+ Y++ VEA DG GL + +++ +LDVNDN PE+ ++ I E+ P
Sbjct: 304 SANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESAPPG 363
Query: 362 TV-AVFSVSDADSGHNQQVICSIENNLPFLLRPSVENFYTLVTEGALDRESRAEYNITIT 420
TV A+F V D DSG N V CSI +LPF L SV N+Y LVT ALDRE YNIT+T
Sbjct: 364 TVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNITVT 423
Query: 421 VTDLGTPRLKTQQSITVQVSDVNDNVPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGI 480
TD GTP L T+ I++ V+D NDN P F +SY+++V ENN I SV+A D D
Sbjct: 424 ATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPDVDQ 483
Query: 481 NAQVTYSLLPPQDPHLPLSSLVSINADNGHLFALRSLDYEALQSFEFRVGATDRGSPALS 540
NAQV+YSL PLSS VSIN+D G L+ALRS DYE L+ + V A+D G P LS
Sbjct: 484 NAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDPPLS 543
Query: 541 SEALVRLLVLDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAW 599
S + L VLD NDN+P +LYP L + EL PR+AEPGYLVTKVVAVD DSGQNAW
Sbjct: 544 SNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAW 603
Query: 600 LSYQLLKATELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVL 659
LSY+LLKA+E GLF V H GEVRTAR L +RDA K LVV V+D+G+PP SAT TL V
Sbjct: 604 LSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVA 663
Query: 660 LVDGFSQPYLPLPEAAPAQAQADS-LTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 718
+ D L P+ DS LT+YLVVA+A+VS +FL V++ +A+RL R ++
Sbjct: 664 VADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWHKSR 723
Query: 719 SVGRYSVPEGPFPG-HLVDVSGTGTLSQSYQYKVCLTGGSETNEFKFLKP 767
+ PG H V V G Q+Y ++V LT S + F +P
Sbjct: 724 LLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQP 773
>gi|14196474 protocadherin gamma subfamily A, 6 isoform 2 precursor
[Homo sapiens]
Length = 818
Score = 623 bits (1607), Expect = e-178
Identities = 351/770 (45%), Positives = 470/770 (61%), Gaps = 6/770 (0%)
Query: 3 QTKVQNKKRQVAFFILLMLWGEVGSESIQYSVLEETESGTFVANLTKDLGLRVGELASRG 62
Q Q ++ + +L LWG ++ I+YS+ EE E G+FV N+ KDLGL ELA G
Sbjct: 5 QRHPQRSEQVLLLTLLGTLWGAAAAQ-IRYSIPEELEKGSFVGNIVKDLGLEPQELAEHG 63
Query: 63 ARVVFKGNRQHLQFDPQTHDLLLNEKLDREELCGSTEPCVLPFQVLLENPLQFFQASLRV 122
R+V +G Q +P+ L+ ++DREELC + C++ F +L+E+ L + + +
Sbjct: 64 VRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVEVEI 123
Query: 123 RDINDHAPEFPAREMLLKISEITMPGKIFPLKMAHDLDTGSNGLQRYTISSNPHFHVLTR 182
DIND+ P F E+ +KI E P FPL +D D G N LQ + +S N HF V +
Sbjct: 124 VDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSVDVQ 183
Query: 183 NRSEGRKFPELVLDKPLDREEQPQLRLTLIALDGGSPPRSGTSEIQIQVLDINDNVPEFA 242
+ + G K+PELVL+ LDRE + RL L A+DGG P RS ++I + VLD+NDN P F
Sbjct: 184 SEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTPMFT 243
Query: 243 QELYEAQVPENNPLGSLVITVSARDLDAGSFGKVSYALFQV-DDVNQPFEINAITGEIRL 301
Q +Y VPEN P+G+ V+ V+A D D G G+V+Y+ ++ + ++Q F +N +TGEI
Sbjct: 244 QPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGEIST 303
Query: 302 RKALDFEEIQSYDVDVEATDGGGLSGKCSLVVRVLDVNDNAPELTMSFFISLIPENLPEI 361
LD+E+ Y++ VEA DG GL + +++ +LDVNDN PE+ ++ I E+ P
Sbjct: 304 SANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESAPPG 363
Query: 362 TV-AVFSVSDADSGHNQQVICSIENNLPFLLRPSVENFYTLVTEGALDRESRAEYNITIT 420
TV A+F V D DSG N V CSI +LPF L SV N+Y LVT ALDRE YNIT+T
Sbjct: 364 TVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNITVT 423
Query: 421 VTDLGTPRLKTQQSITVQVSDVNDNVPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGI 480
TD GTP L T+ I++ V+D NDN P F +SY+++V ENN I SV+A D D
Sbjct: 424 ATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPDVDQ 483
Query: 481 NAQVTYSLLPPQDPHLPLSSLVSINADNGHLFALRSLDYEALQSFEFRVGATDRGSPALS 540
NAQV+YSL PLSS VSIN+D G L+ALRS DYE L+ + V A+D G P LS
Sbjct: 484 NAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDPPLS 543
Query: 541 SEALVRLLVLDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAW 599
S + L VLD NDN+P +LYP L + EL PR+AEPGYLVTKVVAVD DSGQNAW
Sbjct: 544 SNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAW 603
Query: 600 LSYQLLKATELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVL 659
LSY+LLKA+E GLF V H GEVRTAR L +RDA K LVV V+D+G+PP SAT TL V
Sbjct: 604 LSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVA 663
Query: 660 LVDGFSQPYLPLPEAAPAQAQADS-LTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 718
+ D L P+ DS LT+YLVVA+A+VS +FL V++ +A+RL R ++
Sbjct: 664 VADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWHKSR 723
Query: 719 SVGRYSVPEGPFPG-HLVDVSGTGTLSQSYQYKVCLTGGSETNEFKFLKP 767
+ PG H V V G Q+Y ++V LT S + F +P
Sbjct: 724 LLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQP 773
>gi|11056063 protocadherin gamma subfamily A, 7 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 622 bits (1603), Expect = e-178
Identities = 351/765 (45%), Positives = 480/765 (62%), Gaps = 16/765 (2%)
Query: 15 FFILLMLWG---EVGSESIQYSVLEETESGTFVANLTKDLGLRVGELASRGARVVFKGNR 71
FF+L +L G E + I YSV EET+ G+FV ++ KDLGL ELA RG R++ +G
Sbjct: 13 FFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAERGVRIISRGRT 72
Query: 72 QHLQFDPQTHDLLLNEKLDREELCGSTEPCVLPFQVLLENPLQFFQASLRVRDINDHAPE 131
Q + ++ L+ ++DREE+C + C++ F +L+E+ + + + + DIND+ P
Sbjct: 73 QLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVEIIDINDNVPR 132
Query: 132 FPAREMLLKISEITMPGKIFPLKMAHDLDTGSNGLQRYTISSNPHFHVLTRNRSEGRKFP 191
F E+ +KI E T PG FPL A D D G+N LQ Y +S N HF + ++ + K+P
Sbjct: 133 FLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSGDDETKYP 192
Query: 192 ELVLDKPLDREEQPQLRLTLIALDGGSPPRSGTSEIQIQVLDINDNVPEFAQELYEAQVP 251
ELVL++ LDREE+ L L A DGG PPRS T+ IQ+ V+D+ND+ P F+ Y+ VP
Sbjct: 193 ELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLPQYQVTVP 252
Query: 252 ENNPLGSLVITVSARDLDAGSFGKVSYALFQV-DDVNQPFEINAITGEIRLRKALDFEEI 310
EN P+G+ ++TV A DLD G G+V+Y+ ++ + + F +N++TGEI + LD+EE
Sbjct: 253 ENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEISTLEGLDYEET 312
Query: 311 QSYDVDVEATDGGGLSGKCSLVVRVLDVNDNAPELTMSFFISLIPENLPEITV-AVFSVS 369
Y+++V+A DG G K +++ VLDVNDNAPE+TM+ S IPE+ P TV A+F +
Sbjct: 313 AFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTVIALFYLQ 372
Query: 370 DADSGHNQQVICSIENNLPFLLRPSVENFYTLVTEGALDRESRAEYNITITVTDLGTPRL 429
D DSG N +V C+I NLPF L S++N+Y LVT LDRE+ + YNIT+ TD GTP L
Sbjct: 373 DRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGGTPPL 432
Query: 430 KTQQSITVQVSDVNDNVPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGINAQVTYSLL 489
+ I +QV+D NDN P F +SY++++ ENN I V+A D DS NAQ+TYSL
Sbjct: 433 SRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQITYSLA 492
Query: 490 PPQDPHLPLSSLVSINADNGHLFALRSLDYEALQSFEFRVGATDRGSPALSSEALVRLLV 549
P+SS VSIN+D G L+AL+S DYE L+ + RV A D G P LSS + L V
Sbjct: 493 EDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPLSSNMSLSLFV 552
Query: 550 LDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKAT 608
LD NDN P +LYP L + EL PR+AEPGYLVTKVVAVD DSGQNAWLSY LLKA+
Sbjct: 553 LDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLLLKAS 612
Query: 609 ELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQPY 668
E GLF V + GEVRTAR L +RDA K LVV V+D+G+PP SAT TL V + D +
Sbjct: 613 EPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVL 672
Query: 669 LPLPEAAPAQAQAD-SLTVYLVVALASVSSLFLFSVLLFVAVRLCR--RSR---AASVGR 722
L P+ + LT+YLVVA+A+VS +FL VL+ +A+RL R +SR A+ G
Sbjct: 673 ADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKSRLLQASEGGL 732
Query: 723 YSVPEGPFPGHLVDVSGTGTLSQSYQYKVCLTGGSETNEFKFLKP 767
+VP H V + G Q+Y ++V LT S + F +P
Sbjct: 733 ANVP----TSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQP 773
>gi|14196477 protocadherin gamma subfamily A, 7 isoform 2 precursor
[Homo sapiens]
Length = 817
Score = 622 bits (1603), Expect = e-178
Identities = 351/765 (45%), Positives = 480/765 (62%), Gaps = 16/765 (2%)
Query: 15 FFILLMLWG---EVGSESIQYSVLEETESGTFVANLTKDLGLRVGELASRGARVVFKGNR 71
FF+L +L G E + I YSV EET+ G+FV ++ KDLGL ELA RG R++ +G
Sbjct: 13 FFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAERGVRIISRGRT 72
Query: 72 QHLQFDPQTHDLLLNEKLDREELCGSTEPCVLPFQVLLENPLQFFQASLRVRDINDHAPE 131
Q + ++ L+ ++DREE+C + C++ F +L+E+ + + + + DIND+ P
Sbjct: 73 QLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVEIIDINDNVPR 132
Query: 132 FPAREMLLKISEITMPGKIFPLKMAHDLDTGSNGLQRYTISSNPHFHVLTRNRSEGRKFP 191
F E+ +KI E T PG FPL A D D G+N LQ Y +S N HF + ++ + K+P
Sbjct: 133 FLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSGDDETKYP 192
Query: 192 ELVLDKPLDREEQPQLRLTLIALDGGSPPRSGTSEIQIQVLDINDNVPEFAQELYEAQVP 251
ELVL++ LDREE+ L L A DGG PPRS T+ IQ+ V+D+ND+ P F+ Y+ VP
Sbjct: 193 ELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLPQYQVTVP 252
Query: 252 ENNPLGSLVITVSARDLDAGSFGKVSYALFQV-DDVNQPFEINAITGEIRLRKALDFEEI 310
EN P+G+ ++TV A DLD G G+V+Y+ ++ + + F +N++TGEI + LD+EE
Sbjct: 253 ENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEISTLEGLDYEET 312
Query: 311 QSYDVDVEATDGGGLSGKCSLVVRVLDVNDNAPELTMSFFISLIPENLPEITV-AVFSVS 369
Y+++V+A DG G K +++ VLDVNDNAPE+TM+ S IPE+ P TV A+F +
Sbjct: 313 AFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTVIALFYLQ 372
Query: 370 DADSGHNQQVICSIENNLPFLLRPSVENFYTLVTEGALDRESRAEYNITITVTDLGTPRL 429
D DSG N +V C+I NLPF L S++N+Y LVT LDRE+ + YNIT+ TD GTP L
Sbjct: 373 DRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGGTPPL 432
Query: 430 KTQQSITVQVSDVNDNVPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGINAQVTYSLL 489
+ I +QV+D NDN P F +SY++++ ENN I V+A D DS NAQ+TYSL
Sbjct: 433 SRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQITYSLA 492
Query: 490 PPQDPHLPLSSLVSINADNGHLFALRSLDYEALQSFEFRVGATDRGSPALSSEALVRLLV 549
P+SS VSIN+D G L+AL+S DYE L+ + RV A D G P LSS + L V
Sbjct: 493 EDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPLSSNMSLSLFV 552
Query: 550 LDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKAT 608
LD NDN P +LYP L + EL PR+AEPGYLVTKVVAVD DSGQNAWLSY LLKA+
Sbjct: 553 LDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLLLKAS 612
Query: 609 ELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQPY 668
E GLF V + GEVRTAR L +RDA K LVV V+D+G+PP SAT TL V + D +
Sbjct: 613 EPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVL 672
Query: 669 LPLPEAAPAQAQAD-SLTVYLVVALASVSSLFLFSVLLFVAVRLCR--RSR---AASVGR 722
L P+ + LT+YLVVA+A+VS +FL VL+ +A+RL R +SR A+ G
Sbjct: 673 ADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKSRLLQASEGGL 732
Query: 723 YSVPEGPFPGHLVDVSGTGTLSQSYQYKVCLTGGSETNEFKFLKP 767
+VP H V + G Q+Y ++V LT S + F +P
Sbjct: 733 ANVP----TSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQP 773
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.134 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,871,749
Number of Sequences: 37866
Number of extensions: 1349672
Number of successful extensions: 10197
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 189
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 3065
Number of HSP's gapped (non-prelim): 661
length of query: 794
length of database: 18,247,518
effective HSP length: 110
effective length of query: 684
effective length of database: 14,082,258
effective search space: 9632264472
effective search space used: 9632264472
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.