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Search of human proteins with 9256610
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|9256610 protocadherin beta 15 precursor [Homo sapiens]
(787 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|9256610 protocadherin beta 15 precursor [Homo sapiens] 1544 0.0
gi|9256614 protocadherin beta 3 precursor [Homo sapiens] 1211 0.0
gi|9256616 protocadherin beta 4 precursor [Homo sapiens] 1197 0.0
gi|7661662 protocadherin beta 5 precursor [Homo sapiens] 1194 0.0
gi|14195605 protocadherin beta 16 precursor [Homo sapiens] 1194 0.0
gi|9256618 protocadherin beta 6 precursor [Homo sapiens] 1183 0.0
gi|9256612 protocadherin beta 2 precursor [Homo sapiens] 1179 0.0
gi|9256608 protocadherin beta 14 precursor [Homo sapiens] 1179 0.0
gi|11276081 protocadherin beta 8 precursor [Homo sapiens] 1174 0.0
gi|14195616 protocadherin beta 9 precursor [Homo sapiens] 1166 0.0
gi|11036654 protocadherin beta 13 precursor [Homo sapiens] 1161 0.0
gi|11036656 protocadherin beta 7 precursor [Homo sapiens] 1159 0.0
gi|9256602 protocadherin beta 10 precursor [Homo sapiens] 1157 0.0
gi|9256604 protocadherin beta 11 precursor [Homo sapiens] 1150 0.0
gi|9256606 protocadherin beta 12 precursor [Homo sapiens] 1150 0.0
gi|14195607 protocadherin beta 1 precursor [Homo sapiens] 785 0.0
gi|11056030 protocadherin gamma subfamily A, 2 isoform 1 precurs... 673 0.0
gi|14196462 protocadherin gamma subfamily A, 2 isoform 2 precurs... 673 0.0
gi|11056032 protocadherin gamma subfamily A, 1 isoform 1 precurs... 661 0.0
gi|14196459 protocadherin gamma subfamily A, 1 isoform 2 precurs... 661 0.0
gi|11056063 protocadherin gamma subfamily A, 7 isoform 1 precurs... 657 0.0
gi|14196477 protocadherin gamma subfamily A, 7 isoform 2 precurs... 657 0.0
gi|11056065 protocadherin gamma subfamily A, 6 isoform 1 precurs... 656 0.0
gi|14196474 protocadherin gamma subfamily A, 6 isoform 2 precurs... 656 0.0
gi|11128041 protocadherin gamma subfamily A, 10 isoform 1 precur... 652 0.0
gi|14196448 protocadherin gamma subfamily A, 10 isoform 2 precur... 652 0.0
gi|14589880 protocadherin gamma subfamily A, 3 isoform 1 precurs... 650 0.0
gi|14196465 protocadherin gamma subfamily A, 3 isoform 2 precurs... 650 0.0
gi|11128043 protocadherin gamma subfamily A, 9 isoform 1 precurs... 647 0.0
gi|14270487 protocadherin gamma subfamily A, 9 isoform 2 precurs... 647 0.0
>gi|9256610 protocadherin beta 15 precursor [Homo sapiens]
Length = 787
Score = 1544 bits (3998), Expect = 0.0
Identities = 787/787 (100%), Positives = 787/787 (100%)
Query: 1 MEPAGERFPEQRQVLILLLLLEVTLAGWEPRRYSVMEETERGSFVANLANDLGLGVGELA 60
MEPAGERFPEQRQVLILLLLLEVTLAGWEPRRYSVMEETERGSFVANLANDLGLGVGELA
Sbjct: 1 MEPAGERFPEQRQVLILLLLLEVTLAGWEPRRYSVMEETERGSFVANLANDLGLGVGELA 60
Query: 61 ERGARVVSEDNEQGLQLDLQTGQLILNEKLDREKLCGPTEPCIMHFQVLLKKPLEVFRAE 120
ERGARVVSEDNEQGLQLDLQTGQLILNEKLDREKLCGPTEPCIMHFQVLLKKPLEVFRAE
Sbjct: 61 ERGARVVSEDNEQGLQLDLQTGQLILNEKLDREKLCGPTEPCIMHFQVLLKKPLEVFRAE 120
Query: 121 LLVTDINDHSPEFPEREMTLKIPETSSLGTVFPLKKARDLDVGSNNVQNYNISPNSHFHV 180
LLVTDINDHSPEFPEREMTLKIPETSSLGTVFPLKKARDLDVGSNNVQNYNISPNSHFHV
Sbjct: 121 LLVTDINDHSPEFPEREMTLKIPETSSLGTVFPLKKARDLDVGSNNVQNYNISPNSHFHV 180
Query: 181 STRTRGDGRKYPELVLDTELDREEQAELRLTLTAVDGGSPPRSGTVQILILVLDANDNAP 240
STRTRGDGRKYPELVLDTELDREEQAELRLTLTAVDGGSPPRSGTVQILILVLDANDNAP
Sbjct: 181 STRTRGDGRKYPELVLDTELDREEQAELRLTLTAVDGGSPPRSGTVQILILVLDANDNAP 240
Query: 241 EFVQALYEVQVPENSPVGSLVVKVSARDLDTGTNGEISYSLYYSSQEIDKPFELSSLSGE 300
EFVQALYEVQVPENSPVGSLVVKVSARDLDTGTNGEISYSLYYSSQEIDKPFELSSLSGE
Sbjct: 241 EFVQALYEVQVPENSPVGSLVVKVSARDLDTGTNGEISYSLYYSSQEIDKPFELSSLSGE 300
Query: 301 IRLIKKLDFETMSSYDLDIEASDGGGLSGKCSVSVKVLDVNDNFPELSISSLTSPIPENS 360
IRLIKKLDFETMSSYDLDIEASDGGGLSGKCSVSVKVLDVNDNFPELSISSLTSPIPENS
Sbjct: 301 IRLIKKLDFETMSSYDLDIEASDGGGLSGKCSVSVKVLDVNDNFPELSISSLTSPIPENS 360
Query: 361 PETEVALFRIRDRDSGENGKMICSIQDDVPFKLKPSVENFYRLVTEGALDRETRAEYNIT 420
PETEVALFRIRDRDSGENGKMICSIQDDVPFKLKPSVENFYRLVTEGALDRETRAEYNIT
Sbjct: 361 PETEVALFRIRDRDSGENGKMICSIQDDVPFKLKPSVENFYRLVTEGALDRETRAEYNIT 420
Query: 421 ITITDLGTPRLKTEQSITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDS 480
ITITDLGTPRLKTEQSITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDS
Sbjct: 421 ITITDLGTPRLKTEQSITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDS 480
Query: 481 GTNAQVTYSLLPPRDPHLPLTSLVSINTDNGHLFALQSLDYEALQAFEFRVGATDRGFPA 540
GTNAQVTYSLLPPRDPHLPLTSLVSINTDNGHLFALQSLDYEALQAFEFRVGATDRGFPA
Sbjct: 481 GTNAQVTYSLLPPRDPHLPLTSLVSINTDNGHLFALQSLDYEALQAFEFRVGATDRGFPA 540
Query: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA
Sbjct: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
Query: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDVAKHRLVVLVKDNGEPPRSATATLQV 660
WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDVAKHRLVVLVKDNGEPPRSATATLQV
Sbjct: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDVAKHRLVVLVKDNGEPPRSATATLQV 660
Query: 661 LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVFLFVAVRLCRRSRAA 720
LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVFLFVAVRLCRRSRAA
Sbjct: 661 LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVFLFVAVRLCRRSRAA 720
Query: 721 SVGRCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSESNDFKFLKPIFPNIVSQDSR 780
SVGRCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSESNDFKFLKPIFPNIVSQDSR
Sbjct: 721 SVGRCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSESNDFKFLKPIFPNIVSQDSR 780
Query: 781 RKSEFLE 787
RKSEFLE
Sbjct: 781 RKSEFLE 787
>gi|9256614 protocadherin beta 3 precursor [Homo sapiens]
Length = 796
Score = 1211 bits (3133), Expect = 0.0
Identities = 614/784 (78%), Positives = 688/784 (87%)
Query: 1 MEPAGERFPEQRQVLILLLLLEVTLAGWEPRRYSVMEETERGSFVANLANDLGLGVGELA 60
ME GERF QRQVL+L + L +LAG E RRYSV EE E+G +ANLA DLGL V ELA
Sbjct: 1 MEAGGERFLRQRQVLLLFVFLGGSLAGSESRRYSVAEEKEKGFLIANLAKDLGLRVEELA 60
Query: 61 ERGARVVSEDNEQGLQLDLQTGQLILNEKLDREKLCGPTEPCIMHFQVLLKKPLEVFRAE 120
RGA+VVS+ N+Q QL QTG L+LNEKLDRE+LCGPTEPCI+HFQ+LL+ PL+ E
Sbjct: 61 ARGAQVVSKGNKQHFQLSHQTGDLLLNEKLDREELCGPTEPCILHFQILLQNPLQFVTNE 120
Query: 121 LLVTDINDHSPEFPEREMTLKIPETSSLGTVFPLKKARDLDVGSNNVQNYNISPNSHFHV 180
L + D+NDHSP F E EM LKI E++ GTV PL A DLDVG N++QNY I+PNSHFHV
Sbjct: 121 LRIIDVNDHSPVFFENEMHLKILESTLPGTVIPLGNAEDLDVGRNSLQNYTITPNSHFHV 180
Query: 181 STRTRGDGRKYPELVLDTELDREEQAELRLTLTAVDGGSPPRSGTVQILILVLDANDNAP 240
TR+R DGRKYPELVLD LDREEQ EL LTLTA+DGGSPPRSGT QI I VLD NDNAP
Sbjct: 181 LTRSRRDGRKYPELVLDKALDREEQPELSLTLTALDGGSPPRSGTAQINIQVLDINDNAP 240
Query: 241 EFVQALYEVQVPENSPVGSLVVKVSARDLDTGTNGEISYSLYYSSQEIDKPFELSSLSGE 300
EF Q LYEV V EN+PV S++V VSA DLDTG+ G ISY+ +++S+EI K F+L+ ++G+
Sbjct: 241 EFAQPLYEVAVLENTPVNSVIVTVSASDLDTGSFGTISYAFFHASEEIRKTFQLNPITGD 300
Query: 301 IRLIKKLDFETMSSYDLDIEASDGGGLSGKCSVSVKVLDVNDNFPELSISSLTSPIPENS 360
++L+K L+FE ++SY++DIEA DGGGLSGK +V V+V+DVNDN PEL++SS+ SPIPENS
Sbjct: 301 MQLVKYLNFEAINSYEVDIEAKDGGGLSGKSTVIVQVVDVNDNPPELTLSSVNSPIPENS 360
Query: 361 PETEVALFRIRDRDSGENGKMICSIQDDVPFKLKPSVENFYRLVTEGALDRETRAEYNIT 420
ET +A+F + D DSG+NG+++CSI++++PF LKPSVENFY LV+EGALDRETR+EYNIT
Sbjct: 361 GETVLAVFSVSDLDSGDNGRVMCSIENNLPFFLKPSVENFYTLVSEGALDRETRSEYNIT 420
Query: 421 ITITDLGTPRLKTEQSITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDS 480
ITITDLGTPRLKT+ +ITVLVSDVNDNAPAFTQ SYTLFVRENNSPALHIGSVSATDRDS
Sbjct: 421 ITITDLGTPRLKTKYNITVLVSDVNDNAPAFTQISYTLFVRENNSPALHIGSVSATDRDS 480
Query: 481 GTNAQVTYSLLPPRDPHLPLTSLVSINTDNGHLFALQSLDYEALQAFEFRVGATDRGFPA 540
GTNAQVTYSLLPP+DPHLPL+SLVSIN DNGHLFAL+SLDYEALQAFEFRVGATDRG PA
Sbjct: 481 GTNAQVTYSLLPPQDPHLPLSSLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPA 540
Query: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA
Sbjct: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
Query: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDVAKHRLVVLVKDNGEPPRSATATLQV 660
WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERD AKHRLVVLVKDNGEPPRSATATL V
Sbjct: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV 660
Query: 661 LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVFLFVAVRLCRRSRAA 720
LLVDGFSQPYLPLPEAAPAQAQAD LTVYLVVALASVSSLFLFSV LFVAVRLCRRSRAA
Sbjct: 661 LLVDGFSQPYLPLPEAAPAQAQADLLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 720
Query: 721 SVGRCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSESNDFKFLKPIFPNIVSQDSR 780
SVGRCSVPEGPFPG +VDVSGTGTLSQSYQYEVCLTGGS +N+FKFLKPI PN V+Q +
Sbjct: 721 SVGRCSVPEGPFPGQMVDVSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNFVAQGAE 780
Query: 781 RKSE 784
R SE
Sbjct: 781 RVSE 784
>gi|9256616 protocadherin beta 4 precursor [Homo sapiens]
Length = 795
Score = 1197 bits (3097), Expect = 0.0
Identities = 602/776 (77%), Positives = 674/776 (86%)
Query: 7 RFPEQRQVLILLLLLEVTLAGWEPRRYSVMEETERGSFVANLANDLGLGVGELAERGARV 66
R RQVL +L++ ++ EP RYSV+EETE GSFVA+LA DLGLG+GELA R ARV
Sbjct: 6 RIHPNRQVLAFILMVFLSQVRLEPIRYSVLEETESGSFVAHLAKDLGLGIGELASRSARV 65
Query: 67 VSEDNEQGLQLDLQTGQLILNEKLDREKLCGPTEPCIMHFQVLLKKPLEVFRAELLVTDI 126
+S+D++Q LQLD QTG L+L EKLDRE+LCGP EPC++HFQV L+ P++ F+ ELL+ DI
Sbjct: 66 LSDDDKQRLQLDRQTGDLLLREKLDREELCGPIEPCVLHFQVFLEMPVQFFQGELLIQDI 125
Query: 127 NDHSPEFPEREMTLKIPETSSLGTVFPLKKARDLDVGSNNVQNYNISPNSHFHVSTRTRG 186
NDHSP FPERE+ LKI E S GT+FPL A DLDVGSN +Q Y ISPNSHFH+ TR
Sbjct: 126 NDHSPIFPEREVLLKILENSQPGTLFPLLIAEDLDVGSNGLQKYTISPNSHFHILTRNHS 185
Query: 187 DGRKYPELVLDTELDREEQAELRLTLTAVDGGSPPRSGTVQILILVLDANDNAPEFVQAL 246
+G+KYP+LV D LDREEQ E LTL A+DGGSPPRSGTV + IL++D NDNAPEFV
Sbjct: 186 EGKKYPDLVQDKPLDREEQPEFSLTLVALDGGSPPRSGTVMVRILIMDINDNAPEFVHTP 245
Query: 247 YEVQVPENSPVGSLVVKVSARDLDTGTNGEISYSLYYSSQEIDKPFELSSLSGEIRLIKK 306
Y VQV ENSP+ S +V+V ARD+D G G +SY L+ +S EI + F ++ ++GEI L KK
Sbjct: 246 YGVQVLENSPLDSPIVRVLARDIDAGNFGSVSYGLFQASDEIKQTFSINEVTGEILLKKK 305
Query: 307 LDFETMSSYDLDIEASDGGGLSGKCSVSVKVLDVNDNFPELSISSLTSPIPENSPETEVA 366
LDFE + SY ++IEA+DGGGLSGK +V ++V+DVNDN PEL ISSLTS IPEN+PET V+
Sbjct: 306 LDFEKIKSYHVEIEATDGGGLSGKGTVVIEVVDVNDNPPELIISSLTSSIPENAPETVVS 365
Query: 367 LFRIRDRDSGENGKMICSIQDDVPFKLKPSVENFYRLVTEGALDRETRAEYNITITITDL 426
+FRIRDRDSGENGKMICSI D++PF LKP+++NFY LVTE LDRET AEYNITI +TDL
Sbjct: 366 IFRIRDRDSGENGKMICSIPDNLPFILKPTLKNFYTLVTERPLDRETSAEYNITIAVTDL 425
Query: 427 GTPRLKTEQSITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQV 486
GTPRLKT+Q+ITV VSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQV
Sbjct: 426 GTPRLKTQQNITVQVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQV 485
Query: 487 TYSLLPPRDPHLPLTSLVSINTDNGHLFALQSLDYEALQAFEFRVGATDRGFPALSSEAL 546
TYSLLPP+DPHLPL SLVSIN DNGHLFAL+SLDYEALQAFEFRVGA+DRG PALSSEAL
Sbjct: 486 TYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGASDRGSPALSSEAL 545
Query: 547 VRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQL 606
VRVLVLD NDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQL
Sbjct: 546 VRVLVLDTNDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQL 605
Query: 607 LKATEPGLFGVWAHNGEVRTARLLSERDVAKHRLVVLVKDNGEPPRSATATLQVLLVDGF 666
LKATEPGLFGVWAHNGEVRTARLLSERD AKHRLVVLVKDNGEPPRSATATL VLLVDGF
Sbjct: 606 LKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGF 665
Query: 667 SQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVFLFVAVRLCRRSRAASVGRCS 726
SQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSV LFVAVRLCRRSRAASVGRCS
Sbjct: 666 SQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRCS 725
Query: 727 VPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSESNDFKFLKPIFPNIVSQDSRRK 782
VPEGPFPGHLVDVSGTGTLSQSYQYEVCLTG S + +FKFLKPIFPN++ QD+ R+
Sbjct: 726 VPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGDSGTGEFKFLKPIFPNLLVQDTGRE 781
>gi|7661662 protocadherin beta 5 precursor [Homo sapiens]
Length = 795
Score = 1194 bits (3089), Expect = 0.0
Identities = 598/777 (76%), Positives = 681/777 (87%), Gaps = 1/777 (0%)
Query: 1 MEPAGERFPEQRQVLILLLLLEVTLAGWEPRRYSVMEETERGSFVANLANDLGLGVGELA 60
ME A + P++RQV+ L +LL + AG E RYS+ EETE G VANLA DLGLGVGELA
Sbjct: 1 METALAKTPQKRQVMFLAILLLLWEAGSEAVRYSIPEETESGYSVANLAKDLGLGVGELA 60
Query: 61 ERGARVVSEDNEQGLQLDLQTGQLILNEKLDREKLCGPTEPCIMHFQVLLKKPLEVFRAE 120
RGAR+ + N++ LQLD++TG L+L EKLDRE +CG TEPCI+HFQ+LL+ P++ F+ +
Sbjct: 61 TRGARMHYKGNKELLQLDIKTGNLLLYEKLDREVMCGATEPCILHFQLLLENPVQFFQTD 120
Query: 121 LLVTDINDHSPEFPEREMTLKIPETSSLGTVFPLKKARDLDVGSNNVQNYNISPNSHFHV 180
L +TDINDH+PEFPE+EM LKIPE++ GTVFPLK A+D D+GSN VQNY ISPNSHFHV
Sbjct: 121 LQLTDINDHAPEFPEKEMLLKIPESTQPGTVFPLKIAQDFDIGSNTVQNYTISPNSHFHV 180
Query: 181 STRTRGDGRKYPELVLDTELDREEQAELRLTLTAVDGGSPPRSGTVQILILVLDANDNAP 240
+T RGDGRKYPELVLD LDREE+ EL LTLTA+DGG+PPRSGT I I+VLD NDNAP
Sbjct: 181 ATHNRGDGRKYPELVLDKALDREERPELSLTLTALDGGAPPRSGTTTIRIVVLDNNDNAP 240
Query: 241 EFVQALYEVQVPENSPVGSLVVKVSARDLDTGTNGEISYSLYYSSQEIDKPFELSSLSGE 300
EF+Q+ YEVQVPENSP+ SLVV VSARDLD G G ++Y+L+ E+ +PF + + E
Sbjct: 241 EFLQSFYEVQVPENSPLNSLVVVVSARDLDAGAYGSVAYALF-QGDEVTQPFVIDEKTAE 299
Query: 301 IRLIKKLDFETMSSYDLDIEASDGGGLSGKCSVSVKVLDVNDNFPELSISSLTSPIPENS 360
IRL + LDFE Y+++I A+DGGGLSGKC+V+++V+DVNDN PEL++S+L+SP PEN+
Sbjct: 300 IRLKRALDFEATPYYNVEIVATDGGGLSGKCTVAIEVVDVNDNAPELTMSTLSSPTPENA 359
Query: 361 PETEVALFRIRDRDSGENGKMICSIQDDVPFKLKPSVENFYRLVTEGALDRETRAEYNIT 420
PET VA+F + D DSG+NG+MICSIQ+D+PF LKP+++NFY LVT+ LDRE++AEYNIT
Sbjct: 360 PETVVAVFSVSDPDSGDNGRMICSIQNDLPFLLKPTLKNFYTLVTQRTLDRESQAEYNIT 419
Query: 421 ITITDLGTPRLKTEQSITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDS 480
IT+TD+GTPRLKTE +ITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDS
Sbjct: 420 ITVTDMGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDS 479
Query: 481 GTNAQVTYSLLPPRDPHLPLTSLVSINTDNGHLFALQSLDYEALQAFEFRVGATDRGFPA 540
GTNAQVTYSLLPP++PHL L SLVSIN DNGHLFAL+SLDYEALQAFEFRVGATDRG PA
Sbjct: 480 GTNAQVTYSLLPPQNPHLRLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPA 539
Query: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA
Sbjct: 540 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 599
Query: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDVAKHRLVVLVKDNGEPPRSATATLQV 660
WLSYQLLKATEPGLF +WAHNGEVRTARLLSERD AKHRLVVLVKDNGEPPRSATATL V
Sbjct: 600 WLSYQLLKATEPGLFSMWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV 659
Query: 661 LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVFLFVAVRLCRRSRAA 720
LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSV LFVAVRLCRRSRAA
Sbjct: 660 LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 719
Query: 721 SVGRCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSESNDFKFLKPIFPNIVSQ 777
SVGRCSVPEGPFPGHLVDVSGTGTLSQSY YEVCLTG S + +FKFLKPI PN++ Q
Sbjct: 720 SVGRCSVPEGPFPGHLVDVSGTGTLSQSYHYEVCLTGDSGAGEFKFLKPIIPNLLPQ 776
>gi|14195605 protocadherin beta 16 precursor [Homo sapiens]
Length = 776
Score = 1194 bits (3088), Expect = 0.0
Identities = 596/763 (78%), Positives = 674/763 (88%)
Query: 11 QRQVLILLLLLEVTLAGWEPRRYSVMEETERGSFVANLANDLGLGVGELAERGARVVSED 70
QRQVL+ +LL ++ AG E YSV+EETERGSFVANL DLGLG+ E++ R AR++S+
Sbjct: 11 QRQVLVFFVLLSLSGAGAELGSYSVVEETERGSFVANLGKDLGLGLTEMSTRKARIISQG 70
Query: 71 NEQGLQLDLQTGQLILNEKLDREKLCGPTEPCIMHFQVLLKKPLEVFRAELLVTDINDHS 130
N+Q LQL QTG L++NEKLDRE+LCGPTEPCI+HFQVL++ PLE+F+AEL V DINDHS
Sbjct: 71 NKQHLQLKAQTGDLLINEKLDREELCGPTEPCILHFQVLMENPLEIFQAELRVIDINDHS 130
Query: 131 PEFPEREMTLKIPETSSLGTVFPLKKARDLDVGSNNVQNYNISPNSHFHVSTRTRGDGRK 190
P F E+EM LKIPE S LGT FPL A DLDVGSNNVQNY ISP+SHF V DGRK
Sbjct: 131 PMFTEKEMILKIPENSPLGTEFPLNHALDLDVGSNNVQNYKISPSSHFRVLIHEFRDGRK 190
Query: 191 YPELVLDTELDREEQAELRLTLTAVDGGSPPRSGTVQILILVLDANDNAPEFVQALYEVQ 250
YPELVLD ELDREE+ +LRLTLTA+DGGSPPRSGT Q+ I V+D NDNAPEF Q +Y+VQ
Sbjct: 191 YPELVLDKELDREEEPQLRLTLTALDGGSPPRSGTAQVRIEVVDINDNAPEFEQPIYKVQ 250
Query: 251 VPENSPVGSLVVKVSARDLDTGTNGEISYSLYYSSQEIDKPFELSSLSGEIRLIKKLDFE 310
+PENSP+GSLV VSARDLD G NG+ISY+L+ S++I K E++ ++GE+RL K++DFE
Sbjct: 251 IPENSPLGSLVATVSARDLDGGANGKISYTLFQPSEDISKTLEVNPMTGEVRLRKQVDFE 310
Query: 311 TMSSYDLDIEASDGGGLSGKCSVSVKVLDVNDNFPELSISSLTSPIPENSPETEVALFRI 370
++SY++ I+A+DGGGLSGKC++ ++V+DVNDN P++++S+LTSPIPENSPE VA+F +
Sbjct: 311 MVTSYEVRIKATDGGGLSGKCTLLLQVVDVNDNPPQVTMSALTSPIPENSPEIVVAVFSV 370
Query: 371 RDRDSGENGKMICSIQDDVPFKLKPSVENFYRLVTEGALDRETRAEYNITITITDLGTPR 430
D DSG NGK I SIQ+D+PF LKPSV+NFY LVTE ALDRE RAEYNIT+T+TD+GTPR
Sbjct: 371 SDPDSGNNGKTISSIQEDLPFLLKPSVKNFYTLVTERALDREARAEYNITLTVTDMGTPR 430
Query: 431 LKTEQSITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSL 490
LKTE +ITV +SDVNDNAP FTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSL
Sbjct: 431 LKTEHNITVQISDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSL 490
Query: 491 LPPRDPHLPLTSLVSINTDNGHLFALQSLDYEALQAFEFRVGATDRGFPALSSEALVRVL 550
LPP+DPHLPL SLVSIN DNGHLFAL+SLDYEAL+ FEFRV ATDRG PALSSEALVRVL
Sbjct: 491 LPPQDPHLPLASLVSINADNGHLFALRSLDYEALREFEFRVSATDRGSPALSSEALVRVL 550
Query: 551 VLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKAT 610
VLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKAT
Sbjct: 551 VLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKAT 610
Query: 611 EPGLFGVWAHNGEVRTARLLSERDVAKHRLVVLVKDNGEPPRSATATLQVLLVDGFSQPY 670
EPGLFGVWAHNGEVRTARLLSERD AK RLVVLVKDNGEPPRSATATL VLLVDGFSQP+
Sbjct: 611 EPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHVLLVDGFSQPF 670
Query: 671 LPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVFLFVAVRLCRRSRAASVGRCSVPEG 730
LPLPEAAP Q QA+SLTVYLVVALASVSSLFLFSV LFVAVRLCRRSRAASVGRCS+PEG
Sbjct: 671 LPLPEAAPGQTQANSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRCSMPEG 730
Query: 731 PFPGHLVDVSGTGTLSQSYQYEVCLTGGSESNDFKFLKPIFPN 773
PFPG LVDVSGTGTLSQSYQYEVCLTGGSE+++FKFLKPI PN
Sbjct: 731 PFPGRLVDVSGTGTLSQSYQYEVCLTGGSETSEFKFLKPIIPN 773
>gi|9256618 protocadherin beta 6 precursor [Homo sapiens]
Length = 794
Score = 1183 bits (3060), Expect = 0.0
Identities = 599/775 (77%), Positives = 670/775 (86%), Gaps = 1/775 (0%)
Query: 10 EQRQVLILLLLLEVTLAGWEPRRYSVMEETERGSFVANLANDLGLGVGELAERGARVVSE 69
++RQV +LL+ G E +YSV+EETE G+FVANL DLGL VGELA RGARVV +
Sbjct: 9 KKRQVAFFILLMLWGEVGSESIQYSVLEETESGTFVANLTKDLGLRVGELASRGARVVFK 68
Query: 70 DNEQGLQLDLQTGQLILNEKLDREKLCGPTEPCIMHFQVLLKKPLEVFRAELLVTDINDH 129
N Q LQ D QT L+LNEKLDRE+LCG TEPC++ FQVLL+ PL+ F+A L V DINDH
Sbjct: 69 GNRQHLQFDPQTHDLLLNEKLDREELCGSTEPCVLPFQVLLENPLQFFQASLRVRDINDH 128
Query: 130 SPEFPEREMTLKIPETSSLGTVFPLKKARDLDVGSNNVQNYNISPNSHFHVSTRTRGDGR 189
+PEFP REM LKI E + G +FPLK A DLD GSN +Q Y IS N HFHV TR R +GR
Sbjct: 129 APEFPAREMLLKISEITMPGKIFPLKMAHDLDTGSNGLQRYTISSNPHFHVLTRNRSEGR 188
Query: 190 KYPELVLDTELDREEQAELRLTLTAVDGGSPPRSGTVQILILVLDANDNAPEFVQALYEV 249
K+PELVLD LDREEQ +LRLTL A+DGGSPPRSGT +I I VLD NDN PEF Q LYE
Sbjct: 189 KFPELVLDKPLDREEQPQLRLTLIALDGGSPPRSGTSEIQIQVLDINDNVPEFAQELYEA 248
Query: 250 QVPENSPVGSLVVKVSARDLDTGTNGEISYSLYYSSQEIDKPFELSSLSGEIRLIKKLDF 309
QVPEN+P+GSLV+ VSARDLD G+ G++SY+L+ ++++PFE+++++GEIRL K LDF
Sbjct: 249 QVPENNPLGSLVITVSARDLDAGSFGKVSYALF-QVDDVNQPFEINAITGEIRLRKALDF 307
Query: 310 ETMSSYDLDIEASDGGGLSGKCSVSVKVLDVNDNFPELSISSLTSPIPENSPETEVALFR 369
E + SYD+D+EA+DGGGLSGKCS+ V+VLDVNDN PEL++S S IPEN PE VA+F
Sbjct: 308 EEIQSYDVDVEATDGGGLSGKCSLVVRVLDVNDNAPELTMSFFISLIPENLPEITVAVFS 367
Query: 370 IRDRDSGENGKMICSIQDDVPFKLKPSVENFYRLVTEGALDRETRAEYNITITITDLGTP 429
+ D DSG N ++ICSI++++PF L+PSVENFY LVTEGALDRE+RAEYNITIT+TDLGTP
Sbjct: 368 VSDADSGHNQQVICSIENNLPFLLRPSVENFYTLVTEGALDRESRAEYNITITVTDLGTP 427
Query: 430 RLKTEQSITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYS 489
RLKT+QSITV VSDVNDN PAFTQTSYTLFVRENNSPALHIGSVSATDRDSG NAQVTYS
Sbjct: 428 RLKTQQSITVQVSDVNDNVPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGINAQVTYS 487
Query: 490 LLPPRDPHLPLTSLVSINTDNGHLFALQSLDYEALQAFEFRVGATDRGFPALSSEALVRV 549
LLPP+DPHLPL+SLVSIN DNGHLFAL+SLDYEALQ+FEFRVGATDRG PALSSEALVR+
Sbjct: 488 LLPPQDPHLPLSSLVSINADNGHLFALRSLDYEALQSFEFRVGATDRGSPALSSEALVRL 547
Query: 550 LVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA 609
LVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA
Sbjct: 548 LVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA 607
Query: 610 TEPGLFGVWAHNGEVRTARLLSERDVAKHRLVVLVKDNGEPPRSATATLQVLLVDGFSQP 669
TE GLFGVWAHNGEVRTARLLSERD AKHRLVVLVKDNGEPPRSATATL VLLVDGFSQP
Sbjct: 608 TELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQP 667
Query: 670 YLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVFLFVAVRLCRRSRAASVGRCSVPE 729
YLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSV LFVAVRLCRRSRAASVGR SVPE
Sbjct: 668 YLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRYSVPE 727
Query: 730 GPFPGHLVDVSGTGTLSQSYQYEVCLTGGSESNDFKFLKPIFPNIVSQDSRRKSE 784
GPFPGHLVDVSGTGTLSQSYQY+VCLTGGSE+N+FKFLKPI PN Q + R+ E
Sbjct: 728 GPFPGHLVDVSGTGTLSQSYQYKVCLTGGSETNEFKFLKPIMPNFPPQGTEREME 782
>gi|9256612 protocadherin beta 2 precursor [Homo sapiens]
Length = 798
Score = 1179 bits (3050), Expect = 0.0
Identities = 595/779 (76%), Positives = 673/779 (86%)
Query: 6 ERFPEQRQVLILLLLLEVTLAGWEPRRYSVMEETERGSFVANLANDLGLGVGELAERGAR 65
ER P+QRQVLI +LL + A +PR YSV EETE GSFVANL DLGL +GELA RGAR
Sbjct: 8 ERVPKQRQVLIFFVLLGIAQASCQPRHYSVAEETESGSFVANLLKDLGLEIGELAVRGAR 67
Query: 66 VVSEDNEQGLQLDLQTGQLILNEKLDREKLCGPTEPCIMHFQVLLKKPLEVFRAELLVTD 125
VVS+ + LQ D QTG L+LNEKLDRE+LCGPTEPC++ FQVLL+ PL+ F+AEL + D
Sbjct: 68 VVSKGKKMHLQFDRQTGDLLLNEKLDREELCGPTEPCVLPFQVLLENPLQFFQAELRIRD 127
Query: 126 INDHSPEFPEREMTLKIPETSSLGTVFPLKKARDLDVGSNNVQNYNISPNSHFHVSTRTR 185
+NDHSP F ++E+ LKIPE+ + GT F +++A+DLDVG+N++QNY ISPN HFH++ +
Sbjct: 128 VNDHSPVFLDKEILLKIPESITPGTTFLIERAQDLDVGTNSLQNYTISPNFHFHLNLQDS 187
Query: 186 GDGRKYPELVLDTELDREEQAELRLTLTAVDGGSPPRSGTVQILILVLDANDNAPEFVQA 245
DG P+LVL+ LDREEQ E+RLTLTA+DGGSPPRSGT + I V+D NDN PEF +
Sbjct: 188 LDGIILPQLVLNRALDREEQPEIRLTLTALDGGSPPRSGTALVRIEVVDINDNVPEFAKL 247
Query: 246 LYEVQVPENSPVGSLVVKVSARDLDTGTNGEISYSLYYSSQEIDKPFELSSLSGEIRLIK 305
LYEVQ+PE+SPVGS V VSARDLD GTNGEISY+ +S++I K F LS+ SGE+ L +
Sbjct: 248 LYEVQIPEDSPVGSQVAIVSARDLDIGTNGEISYAFSQASEDIRKTFRLSAKSGELLLRQ 307
Query: 306 KLDFETMSSYDLDIEASDGGGLSGKCSVSVKVLDVNDNFPELSISSLTSPIPENSPETEV 365
KLDFE++ +Y ++I+A+DGGGLSG C V V+V+D+NDN PEL++S+L + IPEN +T +
Sbjct: 308 KLDFESIQTYTVNIQATDGGGLSGTCVVFVQVMDLNDNPPELTMSTLINQIPENLQDTLI 367
Query: 366 ALFRIRDRDSGENGKMICSIQDDVPFKLKPSVENFYRLVTEGALDRETRAEYNITITITD 425
A+F + D DSG+NG+M+CSIQDD+PF LKPSVENFY LV ALDRETR+EYNITIT+TD
Sbjct: 368 AVFSVSDPDSGDNGRMVCSIQDDLPFFLKPSVENFYTLVISTALDRETRSEYNITITVTD 427
Query: 426 LGTPRLKTEQSITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQ 485
GTPRLKTE +ITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQ
Sbjct: 428 FGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQ 487
Query: 486 VTYSLLPPRDPHLPLTSLVSINTDNGHLFALQSLDYEALQAFEFRVGATDRGFPALSSEA 545
VTYSLLPP+DPHLPL SLVSIN DNGHLFALQSLDYEALQAFEFRVGA DRG PALSSEA
Sbjct: 488 VTYSLLPPQDPHLPLASLVSINADNGHLFALQSLDYEALQAFEFRVGAADRGSPALSSEA 547
Query: 546 LVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQ 605
LVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQ
Sbjct: 548 LVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQ 607
Query: 606 LLKATEPGLFGVWAHNGEVRTARLLSERDVAKHRLVVLVKDNGEPPRSATATLQVLLVDG 665
LLKATEPGLFGVWAHNGEVRTARLL ERD AK RLVVLVKDNGEPPRSATATL VLLVDG
Sbjct: 608 LLKATEPGLFGVWAHNGEVRTARLLRERDAAKQRLVVLVKDNGEPPRSATATLHVLLVDG 667
Query: 666 FSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVFLFVAVRLCRRSRAASVGRC 725
FSQPYL LPEAAPAQAQAD LTVYLVVALASVSSLFLFSV LFVAVRLCRRSRAASVGRC
Sbjct: 668 FSQPYLLLPEAAPAQAQADLLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRC 727
Query: 726 SVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSESNDFKFLKPIFPNIVSQDSRRKSE 784
SVPEGPFPG +VDVSGTGTLSQSYQYEVCLTGGS +N+FKFLKPI PN V+Q + R SE
Sbjct: 728 SVPEGPFPGQMVDVSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNFVAQGAERVSE 786
>gi|9256608 protocadherin beta 14 precursor [Homo sapiens]
Length = 798
Score = 1179 bits (3049), Expect = 0.0
Identities = 594/787 (75%), Positives = 679/787 (86%)
Query: 1 MEPAGERFPEQRQVLILLLLLEVTLAGWEPRRYSVMEETERGSFVANLANDLGLGVGELA 60
ME G +RQVLI L+LL ++ AG E YSV EETE GSFVANLA DLGLGV EL+
Sbjct: 1 MEIRGALDLRKRQVLIFLVLLGLSRAGTESAHYSVAEETEIGSFVANLARDLGLGVEELS 60
Query: 61 ERGARVVSEDNEQGLQLDLQTGQLILNEKLDREKLCGPTEPCIMHFQVLLKKPLEVFRAE 120
R ARVVS+DN++ L LDL TG L+LNEKLDR++LCG TEPC++HFQV+L+ PL+ FR E
Sbjct: 61 SREARVVSDDNKKYLHLDLLTGNLLLNEKLDRDELCGSTEPCVLHFQVVLENPLQFFRFE 120
Query: 121 LLVTDINDHSPEFPEREMTLKIPETSSLGTVFPLKKARDLDVGSNNVQNYNISPNSHFHV 180
L V DINDHSP F ++E+ +KI E +++G F ++ A+DLDVGSN++QNY ISPNSHF++
Sbjct: 121 LCVKDINDHSPTFLDKEILIKISEGTTVGATFLMESAQDLDVGSNSLQNYTISPNSHFYI 180
Query: 181 STRTRGDGRKYPELVLDTELDREEQAELRLTLTAVDGGSPPRSGTVQILILVLDANDNAP 240
D + YPELVLD LD E++AELRLTLTAVDGGSPP+SGT +LI VLD NDNAP
Sbjct: 181 KIPDSSDRKIYPELVLDRALDYEQEAELRLTLTAVDGGSPPKSGTTLVLIKVLDINDNAP 240
Query: 241 EFVQALYEVQVPENSPVGSLVVKVSARDLDTGTNGEISYSLYYSSQEIDKPFELSSLSGE 300
EF Q+LYEVQVPE+ P+GS + +SA+DLD G G+ISY+ +++S++I K FE++ +SGE
Sbjct: 241 EFPQSLYEVQVPEDRPLGSWIATISAKDLDAGNYGKISYTFFHASEDIRKTFEINPISGE 300
Query: 301 IRLIKKLDFETMSSYDLDIEASDGGGLSGKCSVSVKVLDVNDNFPELSISSLTSPIPENS 360
+ L LDFE + SY ++I+A+DGGGLSGKC++ VKV+D+NDN PE++ISS+T IPEN+
Sbjct: 301 VNLRSPLDFEVIQSYTINIQATDGGGLSGKCTLLVKVMDINDNPPEVTISSITKRIPENA 360
Query: 361 PETEVALFRIRDRDSGENGKMICSIQDDVPFKLKPSVENFYRLVTEGALDRETRAEYNIT 420
ET VALF I D+DSG+NG+MICSIQD++PF LKP+ +NF+ LV+E ALDRE++AEYNIT
Sbjct: 361 SETLVALFSILDQDSGDNGRMICSIQDNLPFFLKPTFKNFFTLVSEKALDRESQAEYNIT 420
Query: 421 ITITDLGTPRLKTEQSITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDS 480
IT+TDLGTPRLKTE +ITVL+SDVNDNAP FTQTSYTLFVRENNSPALHIGSVSATDRDS
Sbjct: 421 ITVTDLGTPRLKTEYNITVLLSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDS 480
Query: 481 GTNAQVTYSLLPPRDPHLPLTSLVSINTDNGHLFALQSLDYEALQAFEFRVGATDRGFPA 540
GTNAQV YSLLPP+D HLPL SLVSIN DNGHLFAL+SLDYEALQ FEFRVGATDRG PA
Sbjct: 481 GTNAQVNYSLLPPQDRHLPLASLVSINADNGHLFALRSLDYEALQEFEFRVGATDRGSPA 540
Query: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA
Sbjct: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
Query: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDVAKHRLVVLVKDNGEPPRSATATLQV 660
WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERD AKHRLVVLVKDNGEPPRSATATL V
Sbjct: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV 660
Query: 661 LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVFLFVAVRLCRRSRAA 720
LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSV LFVAVRLCRRSRAA
Sbjct: 661 LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 720
Query: 721 SVGRCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSESNDFKFLKPIFPNIVSQDSR 780
SVGRCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGS +N+FKFLKPI PN D+
Sbjct: 721 SVGRCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNFQVHDTG 780
Query: 781 RKSEFLE 787
R +E
Sbjct: 781 RNMGEIE 787
>gi|11276081 protocadherin beta 8 precursor [Homo sapiens]
Length = 801
Score = 1174 bits (3038), Expect = 0.0
Identities = 594/775 (76%), Positives = 665/775 (85%), Gaps = 1/775 (0%)
Query: 1 MEPAGERFPEQRQVLILLLLLEVTLAGW-EPRRYSVMEETERGSFVANLANDLGLGVGEL 59
ME +G+ QRQVL LLL ++LAG EPR YSV+EETE SFV NLA DLGL E
Sbjct: 1 MEASGKLICRQRQVLFSFLLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREF 60
Query: 60 AERGARVVSEDNEQGLQLDLQTGQLILNEKLDREKLCGPTEPCIMHFQVLLKKPLEVFRA 119
+ RG RVVS N+ LQL+ +T L+LNEKLDRE LCG TEPC++ FQVLL+ P E F+A
Sbjct: 61 SRRGVRVVSRGNKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQA 120
Query: 120 ELLVTDINDHSPEFPEREMTLKIPETSSLGTVFPLKKARDLDVGSNNVQNYNISPNSHFH 179
EL V DINDHSP F +++M +K+ E+S GT FPLK A DLD+G NN++NY ISPNS+F
Sbjct: 121 ELQVIDINDHSPVFLDKQMLVKVSESSPPGTAFPLKNAEDLDIGQNNIENYIISPNSYFR 180
Query: 180 VSTRTRGDGRKYPELVLDTELDREEQAELRLTLTAVDGGSPPRSGTVQILILVLDANDNA 239
V TR R DGRKYPELVLD LDREE+AELRLTLTA+DGGSPPRSGT Q+ I V+D NDNA
Sbjct: 181 VLTRKRSDGRKYPELVLDNALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVVDVNDNA 240
Query: 240 PEFVQALYEVQVPENSPVGSLVVKVSARDLDTGTNGEISYSLYYSSQEIDKPFELSSLSG 299
PEF Q Y VQ+ E+SP+ LVVKVSA D+DTG NGEISYSL+ +S EI K F++ L+G
Sbjct: 241 PEFQQPFYRVQISEDSPISFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDFLTG 300
Query: 300 EIRLIKKLDFETMSSYDLDIEASDGGGLSGKCSVSVKVLDVNDNFPELSISSLTSPIPEN 359
EIRL K+LDFE SY+++IEA D GG SGKC+V ++V+DVND+ PE+++S+ TSPIPEN
Sbjct: 301 EIRLKKQLDFEKFQSYEVNIEARDAGGFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPEN 360
Query: 360 SPETEVALFRIRDRDSGENGKMICSIQDDVPFKLKPSVENFYRLVTEGALDRETRAEYNI 419
+PET VALF + D DSGENGK+ CSIQ+D+PF LK SV NFY L+TE LDRE+RAEYN+
Sbjct: 361 APETVVALFSVSDLDSGENGKISCSIQEDLPFLLKSSVGNFYTLLTETPLDRESRAEYNV 420
Query: 420 TITITDLGTPRLKTEQSITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRD 479
TIT+TDLGTPRL T ++TVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRD
Sbjct: 421 TITVTDLGTPRLTTHLNMTVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRD 480
Query: 480 SGTNAQVTYSLLPPRDPHLPLTSLVSINTDNGHLFALQSLDYEALQAFEFRVGATDRGFP 539
SGTNAQVTYSLLPP+DPHLPL SLVSINTDNGHLFAL+SLDYEALQAFEFRVGA+DRG P
Sbjct: 481 SGTNAQVTYSLLPPQDPHLPLASLVSINTDNGHLFALRSLDYEALQAFEFRVGASDRGSP 540
Query: 540 ALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN 599
ALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN
Sbjct: 541 ALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN 600
Query: 600 AWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDVAKHRLVVLVKDNGEPPRSATATLQ 659
AWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERD AK RLVVLVKDNGEPP SATATL
Sbjct: 601 AWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPCSATATLH 660
Query: 660 VLLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVFLFVAVRLCRRSRA 719
+LLVDGFSQPYLPLPEAAPAQ QADSLTVYLVVALASVSSLFLFSV LFVAV LCRRSRA
Sbjct: 661 LLLVDGFSQPYLPLPEAAPAQGQADSLTVYLVVALASVSSLFLFSVLLFVAVLLCRRSRA 720
Query: 720 ASVGRCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSESNDFKFLKPIFPNI 774
ASVGRCSVPEGPFPGHLVDV GTG+LSQ+YQYEVCL GGS +N+F+FLKP+ PNI
Sbjct: 721 ASVGRCSVPEGPFPGHLVDVRGTGSLSQNYQYEVCLAGGSGTNEFQFLKPVLPNI 775
>gi|14195616 protocadherin beta 9 precursor [Homo sapiens]
Length = 797
Score = 1166 bits (3017), Expect = 0.0
Identities = 591/774 (76%), Positives = 662/774 (85%)
Query: 1 MEPAGERFPEQRQVLILLLLLEVTLAGWEPRRYSVMEETERGSFVANLANDLGLGVGELA 60
M+ G FP QRQVL L L V+LAG RYSV EETE+GSFV NLA DLGL GELA
Sbjct: 1 MKTRGFSFPRQRQVLFLFLFWGVSLAGSGFGRYSVTEETEKGSFVVNLAKDLGLAEGELA 60
Query: 61 ERGARVVSEDNEQGLQLDLQTGQLILNEKLDREKLCGPTEPCIMHFQVLLKKPLEVFRAE 120
RG RVVS+DN+Q L LD TG L+ NEKLDREKLCGP EPC+++FQ+L+ P +++RAE
Sbjct: 61 ARGTRVVSDDNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAE 120
Query: 121 LLVTDINDHSPEFPEREMTLKIPETSSLGTVFPLKKARDLDVGSNNVQNYNISPNSHFHV 180
L V DINDHSP F +EM LKI E ++ GT F L++A+D D G N++QNY IS NS FH+
Sbjct: 121 LRVRDINDHSPVFRHKEMVLKISENTAEGTAFRLERAQDPDEGHNSIQNYTISSNSFFHI 180
Query: 181 STRTRGDGRKYPELVLDTELDREEQAELRLTLTAVDGGSPPRSGTVQILILVLDANDNAP 240
+G YPELVLD LDREEQ EL LTLTA+DGGSP RSGT I I+VLD NDNAP
Sbjct: 181 KISGSDEGMIYPELVLDKALDREEQEELSLTLTALDGGSPSRSGTSTIRIVVLDVNDNAP 240
Query: 241 EFVQALYEVQVPENSPVGSLVVKVSARDLDTGTNGEISYSLYYSSQEIDKPFELSSLSGE 300
+F QALYE Q PENSPVGSL+VKVSA D D+G N E+SYS + +S++I F+++ SGE
Sbjct: 241 QFAQALYETQAPENSPVGSLIVKVSAGDADSGVNAEVSYSFFDASEDILTTFQINPFSGE 300
Query: 301 IRLIKKLDFETMSSYDLDIEASDGGGLSGKCSVSVKVLDVNDNFPELSISSLTSPIPENS 360
I L + LD+E ++SY ++I+A DGGGLS +C+V +KVLD NDN PEL ISSL++ + ENS
Sbjct: 301 IFLRELLDYELVNSYKINIQAMDGGGLSARCTVLIKVLDSNDNPPELIISSLSNSVAENS 360
Query: 361 PETEVALFRIRDRDSGENGKMICSIQDDVPFKLKPSVENFYRLVTEGALDRETRAEYNIT 420
P +A+F+I+DRDSGENGK IC +QD++PF LKPSV+NFY L+TEGALDRE++AEYNIT
Sbjct: 361 PGIVLAVFKIKDRDSGENGKTICYVQDNLPFFLKPSVDNFYILMTEGALDRESKAEYNIT 420
Query: 421 ITITDLGTPRLKTEQSITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDS 480
IT+TDLGTPRLKTE SIT+ VSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDS
Sbjct: 421 ITVTDLGTPRLKTEHSITLQVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDS 480
Query: 481 GTNAQVTYSLLPPRDPHLPLTSLVSINTDNGHLFALQSLDYEALQAFEFRVGATDRGFPA 540
GTNAQVTYSLLPP+DPHLPL SLVSIN DNGHLFAL+SLDYEALQAF+FRVGA+DRG PA
Sbjct: 481 GTNAQVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFDFRVGASDRGSPA 540
Query: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA
Sbjct: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
Query: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDVAKHRLVVLVKDNGEPPRSATATLQV 660
WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERD AKHRLVVLVKDNGEPPRSATATL V
Sbjct: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV 660
Query: 661 LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVFLFVAVRLCRRSRAA 720
LLVDGFSQPYLPLPEAAPAQAQAD LTVYLVVALASVSSLFL SV LFVAVRLCRRSRAA
Sbjct: 661 LLVDGFSQPYLPLPEAAPAQAQADLLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAA 720
Query: 721 SVGRCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSESNDFKFLKPIFPNI 774
SVGRCSVPEGPFPGHLVDVSGTGTL QSYQYEVCLTGGSE+ +FKFLKPI P++
Sbjct: 721 SVGRCSVPEGPFPGHLVDVSGTGTLFQSYQYEVCLTGGSETGEFKFLKPITPHL 774
>gi|11036654 protocadherin beta 13 precursor [Homo sapiens]
Length = 798
Score = 1161 bits (3003), Expect = 0.0
Identities = 592/778 (76%), Positives = 663/778 (85%), Gaps = 2/778 (0%)
Query: 1 MEPAGERFPEQRQVLILLLLLEVTLAGW-EPRRYSVMEETERGSFVANLANDLGLGVGEL 59
ME +G+ QRQVL LLL ++LAG EPR YSV+EETE SFV NLA DLGL E
Sbjct: 1 MEASGKLICRQRQVLFSFLLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREF 60
Query: 60 AERGARVVSEDNEQGLQLDLQTGQLILNEKLDREKLCGPTEPCIMHFQVLLKKPLEVFRA 119
+ RG RVVS N+ LQL+ +T L+LNEKLDRE LCG TEPC++ FQVLL+ P E F+A
Sbjct: 61 SRRGVRVVSRGNKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQA 120
Query: 120 ELLVTDINDHSPEFPEREMTLKIPETSSLGTVFPLKKARDLDVGSNNVQNYNISPNSHFH 179
EL V DINDHSP F +++M +K+ E+S GT FPLK A DLDVG NN++NY ISPNS+F
Sbjct: 121 ELQVIDINDHSPVFLDKQMLVKVSESSPPGTTFPLKNAEDLDVGQNNIENYIISPNSYFR 180
Query: 180 VSTRTRGDGRKYPELVLDTELDREEQAELRLTLTAVDGGSPPRSGTVQILILVLDANDNA 239
V TR R DGRKYPELVLD LDREE+AELRLTLTA+DGGSPPRSGT Q+ I VLD NDNA
Sbjct: 181 VLTRKRSDGRKYPELVLDKALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVLDVNDNA 240
Query: 240 PEFVQALYEVQVPENSPVGSLVVKVSARDLDTGTNGEISYSLYYSSQEIDKPFELSSLSG 299
PEF Q Y VQ+ E+SPVG LVVKVSA D+DTG NGEISYSL+ +S+EI K F+++ L+G
Sbjct: 241 PEFEQPFYRVQISEDSPVGFLVVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTG 300
Query: 300 EIRLIKKLDFETMSSYDLDIEASDGGGLSGKCSVSVKVLDVNDNFPELSISSLTSPIPEN 359
EI L K+LDFE + SY+++IEA D G SGKC+V ++V+DVND+ PE+++S+ TSPIPEN
Sbjct: 301 EIELKKQLDFEKLQSYEVNIEARDAGTFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPEN 360
Query: 360 SPETEVALFRIRDRDSGENGKMICSIQDDVPFKLKPSVENFYRLVTEGALDRETRAEYNI 419
+PET VALF + D DSGENGK+ CSIQ+D+PF LK S ENFY L+TE LDRE+RAEYNI
Sbjct: 361 APETVVALFSVSDLDSGENGKISCSIQEDLPFLLK-SAENFYTLLTERPLDRESRAEYNI 419
Query: 420 TITITDLGTPRLKTEQSITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRD 479
TIT+TDLGTP L T+ ++TVL++DVNDNAPAFTQTSYTLFVRENNSPALHI SVSATDRD
Sbjct: 420 TITVTDLGTPMLITQLNMTVLIADVNDNAPAFTQTSYTLFVRENNSPALHIRSVSATDRD 479
Query: 480 SGTNAQVTYSLLPPRDPHLPLTSLVSINTDNGHLFALQSLDYEALQAFEFRVGATDRGFP 539
SGTNAQVTYSLLPP+DPHLPLTSLVSIN DNGHLFAL+SLDYEALQ F+FRVGA+D G P
Sbjct: 480 SGTNAQVTYSLLPPQDPHLPLTSLVSINADNGHLFALRSLDYEALQGFQFRVGASDHGSP 539
Query: 540 ALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN 599
ALSSEALVRV+VLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN
Sbjct: 540 ALSSEALVRVVVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN 599
Query: 600 AWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDVAKHRLVVLVKDNGEPPRSATATLQ 659
AWLSYQLLKATE GLFGVWAHNGEVRTARLLSERD AKHRLVVLVKDNGEPPRSATATL
Sbjct: 600 AWLSYQLLKATELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLH 659
Query: 660 VLLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVFLFVAVRLCRRSRA 719
VLLVDGFSQPYLPLPEAAP QAQAD LTVYLVVALASVSSLFLFSV LFVAVRLCRRSRA
Sbjct: 660 VLLVDGFSQPYLPLPEAAPTQAQADLLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRA 719
Query: 720 ASVGRCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSESNDFKFLKPIFPNIVSQ 777
ASVGRC VPEGP PGHLVD+SGT TLSQSYQYEVCL GGS +N+FKFLKPI PN Q
Sbjct: 720 ASVGRCLVPEGPLPGHLVDMSGTRTLSQSYQYEVCLAGGSGTNEFKFLKPIIPNFPPQ 777
>gi|11036656 protocadherin beta 7 precursor [Homo sapiens]
Length = 793
Score = 1159 bits (2999), Expect = 0.0
Identities = 591/784 (75%), Positives = 666/784 (84%), Gaps = 2/784 (0%)
Query: 1 MEPAGERFPEQRQVLILLLLLEVTLAGWEPRRYSVMEETERGSFVANLANDLGLGVGELA 60
ME ER ++RQVL L + L ++ AG EP RY V EETERG+F+ NLA DLGLGVGEL
Sbjct: 1 MEARVERAVQKRQVLFLCVFLGMSWAGAEPLRYFVAEETERGTFLTNLAKDLGLGVGELR 60
Query: 61 ERGARVVSEDNEQGLQLDLQTGQLILNEKLDREKLCGPTEPCIMHFQVLLKKPLEVFRAE 120
RG R+VS+ N Q L L TG L+LNEKLDRE+LCGP EPC++ FQ+LL+KP ++FRAE
Sbjct: 61 ARGTRIVSDQNMQILLLSSLTGDLLLNEKLDREELCGPREPCVLPFQLLLEKPFQIFRAE 120
Query: 121 LLVTDINDHSPEFPEREMTLKIPETSSLGTVFPLKKARDLDVGSNNVQNYNISPNSHFHV 180
L V DINDH+P F +RE++LKI E+++ G F L+ A+D DVG+N++ NY ISPN++FH+
Sbjct: 121 LWVRDINDHAPVFLDREISLKILESTTPGAAFLLESAQDSDVGTNSLSNYTISPNAYFHI 180
Query: 181 STRTRGDGRKYPELVLDTELDREEQAELRLTLTAVDGGSPPRSGTVQILILVLDANDNAP 240
+ G+G YPELVL+ LDREE E LTLTA+DGGSPPRSGT + ILVLD NDNAP
Sbjct: 181 NVHDSGEGNIYPELVLNQVLDREEIPEFSLTLTALDGGSPPRSGTALVRILVLDVNDNAP 240
Query: 241 EFVQALYEVQVPENSPVGSLVVKVSARDLDTGTNGEISYSLYYSSQEIDKPFELSSLSGE 300
+FV++LY+VQVPENSPVGS+VV VSARDLDTG+NGEI+Y+ Y+++ I K F+++ SG
Sbjct: 241 DFVRSLYKVQVPENSPVGSMVVSVSARDLDTGSNGEIAYAFSYATERILKTFQINPTSGS 300
Query: 301 IRLIKKLDFETMSSYDLDIEASDGGGLSGKCSVSVKVLDVNDNFPELSISSLTSPIPENS 360
+ L +LD+E + +Y L I+A DGGGLSGKC+V V V D+NDN PEL +SSLTSPI ENS
Sbjct: 301 LHLKAQLDYEAIQTYTLTIQAKDGGGLSGKCTVVVDVTDINDNRPELLLSSLTSPIAENS 360
Query: 361 PETEVALFRIRDRDSGENGKMICSIQDDVPFKLKPSVENFYRLVTEGALDRETRAEYNIT 420
PET VA+FRIRDRDSG NGK +CSIQDDVPF LKPSVENFY LVTE LDRE EYNIT
Sbjct: 361 PETVVAVFRIRDRDSGNNGKTVCSIQDDVPFILKPSVENFYTLVTEKPLDRERNTEYNIT 420
Query: 421 ITITDLGTPRLKTEQSITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDS 480
IT+TDLGTPRLKTE +ITVLVSDVNDNAPAFTQTSYTLFVRENNSPAL IGSVSATDRDS
Sbjct: 421 ITVTDLGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALPIGSVSATDRDS 480
Query: 481 GTNAQVTYSLLPPRDPHLPLTSLVSINTDNGHLFALQSLDYEALQAFEFRVGATDRGFPA 540
GTNAQV YSLLP +DPHLPL SLVSIN DNGHLFAL+SLDYEALQAFEFRVGATDRG PA
Sbjct: 481 GTNAQVIYSLLPSQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPA 540
Query: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
LSSEALVRVLVLDANDNSPFVLYPLQN SAPCTE +PRAAEPGYLVTKVVAVDGDSGQNA
Sbjct: 541 LSSEALVRVLVLDANDNSPFVLYPLQNSSAPCTEPLPRAAEPGYLVTKVVAVDGDSGQNA 600
Query: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDVAKHRLVVLVKDNGEPPRSATATLQV 660
WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERD AK RLVVLVKDNGEPPRSATATL V
Sbjct: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHV 660
Query: 661 LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVFLFVAVRLCRRSRAA 720
LLVDGFSQPYL LPEAAP QA+SLTVYLVVALASVSSLFL SV LFVAVRLCRRSRAA
Sbjct: 661 LLVDGFSQPYLRLPEAAP--DQANSLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAA 718
Query: 721 SVGRCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSESNDFKFLKPIFPNIVSQDSR 780
VGRCSVPEGPFP HLVD+SGTGTLSQSYQYEVCLTGGS +N+FKFLKPI PN++ Q +
Sbjct: 719 PVGRCSVPEGPFPRHLVDLSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNLLPQSTG 778
Query: 781 RKSE 784
R+ E
Sbjct: 779 REVE 782
>gi|9256602 protocadherin beta 10 precursor [Homo sapiens]
Length = 800
Score = 1157 bits (2992), Expect = 0.0
Identities = 586/779 (75%), Positives = 658/779 (84%), Gaps = 2/779 (0%)
Query: 8 FPEQRQVLILLLLLEVTLAGWEPRRYSVMEETERGSFVANLANDLGLGVGELAERGARVV 67
FP QRQVL L L V+LAG RYSV EETE+GSFV NLA DLGL GELA RG RVV
Sbjct: 8 FPRQRQVLFLFLFWGVSLAGSGFGRYSVTEETEKGSFVVNLAKDLGLAEGELAARGTRVV 67
Query: 68 SEDNEQGLQLDLQTGQLILNEKLDREKLCGPTEPCIMHFQVLLKKPLEVFRAELLVTDIN 127
S+DN+Q L LD TG L+ NEKLDREKLCGP EPC+++FQ+L+ P +++RAEL V DIN
Sbjct: 68 SDDNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAELRVRDIN 127
Query: 128 DHSPEFPEREMTLKIPETSSLGTVFPLKKARDLDVGSNNVQNYNISPNSHFHVSTRTRGD 187
DH+P F ++E LKI E ++ GT F L++A+D D G N +QNY ISPNS FH++ +
Sbjct: 128 DHAPVFQDKETVLKISENTAEGTAFRLERAQDPDGGLNGIQNYTISPNSFFHINISGGDE 187
Query: 188 GRKYPELVLDTELDREEQAELRLTLTAVDGGSPPRSGTVQILILVLDANDNAPEFVQALY 247
G YPELVLD LDREEQ EL LTLTA+DGGSP RSGT + I+VLD NDNAP+F QALY
Sbjct: 188 GMIYPELVLDKALDREEQGELSLTLTALDGGSPSRSGTSTVRIVVLDVNDNAPQFAQALY 247
Query: 248 EVQVPENSPVGSLVVKVSARDLDTGTNGEISYSLYYSSQEIDKPFELSSLSGEIRLIKKL 307
E Q PENSP+G L+VKV A D+D+G N E+SYS + +S+ I F+++ SGEI L + L
Sbjct: 248 ETQAPENSPIGFLIVKVWAEDVDSGVNAEVSYSFFDASENIRTTFQINPFSGEIFLRELL 307
Query: 308 DFETMSSYDLDIEASDGGGLSGKCSVSVKVLDVNDNFPELSISSLTSPIPENSPETEVAL 367
D+E ++SY ++I+A DGGGLS +C V V+VLD NDN PEL +SS ++ + ENSPET +A+
Sbjct: 308 DYELVNSYKINIQAMDGGGLSARCRVLVEVLDTNDNPPELIVSSFSNSVAENSPETPLAV 367
Query: 368 FRIRDRDSGENGKMICSIQDDVPFKLKPSVENFYRLVTEGALDRETRAEYNITITITDLG 427
F+I DRDSGENGKM+C IQ+++PF LKPSVENFY L+TEGALDRE RAEYNITIT+TDLG
Sbjct: 368 FKINDRDSGENGKMVCYIQENLPFLLKPSVENFYILITEGALDREIRAEYNITITVTDLG 427
Query: 428 TPRLKTEQSITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVT 487
TPRLKTE +ITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVT
Sbjct: 428 TPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVT 487
Query: 488 YSLLPPRDPHLPLTSLVSINTDNGHLFALQSLDYEALQAFEFRVGATDRGFPALSSEALV 547
YSLLPP+DPHLPL SLVSIN DNGHLFAL+SLDYEALQAFEFRVGATDRG PALS EALV
Sbjct: 488 YSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSREALV 547
Query: 548 RVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLL 607
RVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLL
Sbjct: 548 RVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLL 607
Query: 608 KATEPGLFGVWAHNGEVRTARLLSERDVAKHRLVVLVKDNGEPPRSATATLQVLLVDGFS 667
KATEPGLFGVWAHNGEVRTARLLSERD AKHRLVVLVKDNGEPPRSATATL +LLVDGFS
Sbjct: 608 KATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHLLLVDGFS 667
Query: 668 QPYLPLPEAAPAQAQ--ADSLTVYLVVALASVSSLFLFSVFLFVAVRLCRRSRAASVGRC 725
QPYLPLPEAAPAQAQ AD LTVYLVVALASVSSLFL SV LFVAVRLCRRSRAASVGRC
Sbjct: 668 QPYLPLPEAAPAQAQAEADLLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAASVGRC 727
Query: 726 SVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSESNDFKFLKPIFPNIVSQDSRRKSE 784
SVPEGPFPGHLVDV G TLSQSYQYEVCLTGG +++FKFLKP+ +I +Q RK E
Sbjct: 728 SVPEGPFPGHLVDVRGAETLSQSYQYEVCLTGGPGTSEFKFLKPVISDIQAQGPGRKGE 786
>gi|9256604 protocadherin beta 11 precursor [Homo sapiens]
Length = 797
Score = 1150 bits (2975), Expect = 0.0
Identities = 582/784 (74%), Positives = 664/784 (84%)
Query: 1 MEPAGERFPEQRQVLILLLLLEVTLAGWEPRRYSVMEETERGSFVANLANDLGLGVGELA 60
ME G R + RQVL+L +LL ++ AG E +SV EE + GSFV NLA DLGL V EL+
Sbjct: 1 MENQGTRTQQIRQVLLLFVLLGMSQAGSETWSFSVAEEMQSGSFVGNLAKDLGLKVRELS 60
Query: 61 ERGARVVSEDNEQGLQLDLQTGQLILNEKLDREKLCGPTEPCIMHFQVLLKKPLEVFRAE 120
RGARVVS D +Q LQLD+ TG L+L+E LDRE+LCG EPC++H QVL++ P + + E
Sbjct: 61 SRGARVVSNDKKQRLQLDINTGDLLLSETLDREELCGSIEPCVLHLQVLMQNPTQFLQIE 120
Query: 121 LLVTDINDHSPEFPEREMTLKIPETSSLGTVFPLKKARDLDVGSNNVQNYNISPNSHFHV 180
L V DINDHSP F E++M L+IPE S +G VF L+ A+DLDVG N V++Y ISPNSHFH+
Sbjct: 121 LQVRDINDHSPIFSEKQMLLEIPENSPVGAVFLLESAKDLDVGINAVKSYTISPNSHFHI 180
Query: 181 STRTRGDGRKYPELVLDTELDREEQAELRLTLTAVDGGSPPRSGTVQILILVLDANDNAP 240
R D RKYPELVLD LD EE EL L+A+DGGSPPRSGT + ++V+D NDN+P
Sbjct: 181 KMRVIPDNRKYPELVLDKALDYEELPELSFILSALDGGSPPRSGTALVRVVVVDINDNSP 240
Query: 241 EFVQALYEVQVPENSPVGSLVVKVSARDLDTGTNGEISYSLYYSSQEIDKPFELSSLSGE 300
EF QA YEV++ ENS +GSL++ VSA DLD+GTNGEI Y+ ++S++I K FE++ SGE
Sbjct: 241 EFEQAFYEVKIRENSILGSLILIVSAWDLDSGTNGEICYTFSHASEDIRKTFEINQKSGE 300
Query: 301 IRLIKKLDFETMSSYDLDIEASDGGGLSGKCSVSVKVLDVNDNFPELSISSLTSPIPENS 360
I L LDFET+ SY + I+A+DGGGL GK +V + V+DVNDN PE+++SS+TSPIPEN+
Sbjct: 301 ITLRAPLDFETIESYSIIIQATDGGGLFGKSTVIIHVIDVNDNAPEITVSSITSPIPENT 360
Query: 361 PETEVALFRIRDRDSGENGKMICSIQDDVPFKLKPSVENFYRLVTEGALDRETRAEYNIT 420
PET V +F I+D DSG+NG+++CSI +D+PF LK SVEN+Y L TE LDRE+ AEYNIT
Sbjct: 361 PETVVMVFSIQDIDSGDNGRIVCSIPEDLPFVLKSSVENYYTLETERPLDRESTAEYNIT 420
Query: 421 ITITDLGTPRLKTEQSITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDS 480
IT+TDLG PRLKTE + TVLVSDVNDNAP FTQTSYTLFVRENNSPALHIGSVSATDRDS
Sbjct: 421 ITVTDLGIPRLKTEHNTTVLVSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDS 480
Query: 481 GTNAQVTYSLLPPRDPHLPLTSLVSINTDNGHLFALQSLDYEALQAFEFRVGATDRGFPA 540
GTNAQV YSLLPP+D HLPL SLVSINTDNGHLFAL+SLDYEALQAF+FRVGATDRG PA
Sbjct: 481 GTNAQVNYSLLPPQDLHLPLASLVSINTDNGHLFALRSLDYEALQAFDFRVGATDRGSPA 540
Query: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA
Sbjct: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
Query: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDVAKHRLVVLVKDNGEPPRSATATLQV 660
WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERD AKHRLVVLVKDNGEPPRSATATLQV
Sbjct: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLQV 660
Query: 661 LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVFLFVAVRLCRRSRAA 720
LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSV LFVAVRLCRRSRAA
Sbjct: 661 LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 720
Query: 721 SVGRCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSESNDFKFLKPIFPNIVSQDSR 780
SVG CSVP+GPFPGHLVDVSGTGTLSQSYQYEVCLTGGSE+N+FKFLKP+ PNI ++
Sbjct: 721 SVGSCSVPKGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSETNEFKFLKPVIPNIQAKGLG 780
Query: 781 RKSE 784
+ SE
Sbjct: 781 KNSE 784
>gi|9256606 protocadherin beta 12 precursor [Homo sapiens]
Length = 795
Score = 1150 bits (2974), Expect = 0.0
Identities = 581/784 (74%), Positives = 657/784 (83%)
Query: 1 MEPAGERFPEQRQVLILLLLLEVTLAGWEPRRYSVMEETERGSFVANLANDLGLGVGELA 60
ME G + RQVL+ +LL ++ AG E + VMEE + GSFV NLA LGL V EL+
Sbjct: 1 MENGGAGTLQIRQVLLFFVLLGMSQAGSETGNFLVMEELQSGSFVGNLAKTLGLEVSELS 60
Query: 61 ERGARVVSEDNEQGLQLDLQTGQLILNEKLDREKLCGPTEPCIMHFQVLLKKPLEVFRAE 120
RGARVVS DN++ LQLD TG L+L E LDRE+LCG EPC+++FQVL+K P + + E
Sbjct: 61 SRGARVVSNDNKECLQLDTNTGDLLLREMLDREELCGSNEPCVLYFQVLMKNPTQFLQIE 120
Query: 121 LLVTDINDHSPEFPEREMTLKIPETSSLGTVFPLKKARDLDVGSNNVQNYNISPNSHFHV 180
L V DINDHSP F E+EM L+IPE S +G VF L+ A+DLDVG N V++Y I+PNSHFHV
Sbjct: 121 LQVRDINDHSPVFLEKEMLLEIPENSPVGAVFLLESAKDLDVGINAVKSYTINPNSHFHV 180
Query: 181 STRTRGDGRKYPELVLDTELDREEQAELRLTLTAVDGGSPPRSGTVQILILVLDANDNAP 240
R D RKYPELVLD LD EE+ EL LTA+DGGSPPRSGT + ++V+D NDN+P
Sbjct: 181 KIRVNPDNRKYPELVLDKALDYEERPELSFILTALDGGSPPRSGTALVRVVVVDINDNSP 240
Query: 241 EFVQALYEVQVPENSPVGSLVVKVSARDLDTGTNGEISYSLYYSSQEIDKPFELSSLSGE 300
EF QA YEV++ ENS +GSLVV VSA DLD+GTN E+SY+ ++S++I K FE++ SG+
Sbjct: 241 EFEQAFYEVKILENSILGSLVVTVSAWDLDSGTNSELSYTFSHASEDIRKTFEINQKSGD 300
Query: 301 IRLIKKLDFETMSSYDLDIEASDGGGLSGKCSVSVKVLDVNDNFPELSISSLTSPIPENS 360
I L LDFE + SY + I+A+DGGGL GK +V ++V+DVNDN PE+++SS+TSPIPEN+
Sbjct: 301 ITLTAPLDFEAIESYSIIIQATDGGGLFGKSTVRIQVMDVNDNAPEITVSSITSPIPENT 360
Query: 361 PETEVALFRIRDRDSGENGKMICSIQDDVPFKLKPSVENFYRLVTEGALDRETRAEYNIT 420
PET V +FRIRDRDSG+NGKM+CSI +D+PF LK SV N+Y L TE LDRE+RAEYNIT
Sbjct: 361 PETVVMVFRIRDRDSGDNGKMVCSIPEDIPFVLKSSVNNYYTLETERPLDRESRAEYNIT 420
Query: 421 ITITDLGTPRLKTEQSITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDS 480
IT+TDLGTPRLKTE +ITVLVSDVNDNAPAFTQTSY LFVRENNSPALHIGS+SATDRDS
Sbjct: 421 ITVTDLGTPRLKTEHNITVLVSDVNDNAPAFTQTSYALFVRENNSPALHIGSISATDRDS 480
Query: 481 GTNAQVTYSLLPPRDPHLPLTSLVSINTDNGHLFALQSLDYEALQAFEFRVGATDRGFPA 540
GTNAQV YSLLP +DPHLPL SLVSIN DNGHLFAL+SLDYEALQ F+FRVGATD G PA
Sbjct: 481 GTNAQVNYSLLPSQDPHLPLASLVSINADNGHLFALRSLDYEALQGFQFRVGATDHGSPA 540
Query: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVP AAEPGYLVTKVVAVDGDSGQNA
Sbjct: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPWAAEPGYLVTKVVAVDGDSGQNA 600
Query: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDVAKHRLVVLVKDNGEPPRSATATLQV 660
WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERD AKHRLVVLVKDNGEPPRSATATL V
Sbjct: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV 660
Query: 661 LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVFLFVAVRLCRRSRAA 720
LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSV LFVAVRLCRRSRAA
Sbjct: 661 LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 720
Query: 721 SVGRCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSESNDFKFLKPIFPNIVSQDSR 780
VGRCSVPEGPFPGHLVDVSGTGTLSQSY YEVC+TGGS SN FKFLKPI PN + Q +
Sbjct: 721 PVGRCSVPEGPFPGHLVDVSGTGTLSQSYHYEVCVTGGSRSNKFKFLKPIIPNFLPQSTG 780
Query: 781 RKSE 784
+ E
Sbjct: 781 SEVE 784
>gi|14195607 protocadherin beta 1 precursor [Homo sapiens]
Length = 818
Score = 785 bits (2028), Expect = 0.0
Identities = 406/768 (52%), Positives = 540/768 (70%), Gaps = 4/768 (0%)
Query: 10 EQRQVLILLLLLEVTLAGWEPRRYSVMEETERGSFVANLANDLGLGVGELAERGARVVSE 69
+ RQV LL+ L +++ RYSV EE E GSFVAN+A DLGL VG+LA RGAR+VSE
Sbjct: 10 QNRQVGSLLIFLCISVGDATTIRYSVAEEMESGSFVANVAKDLGLEVGKLAARGARLVSE 69
Query: 70 DNEQGLQLDLQTGQLILNEKLDREKLCGPTEPCIMHFQVLLKKPLEVFRAELLVTDINDH 129
N+ +L +TG L + EKLDRE LCG +PC++HF+V+L +PL+ FRAE+ V DIND+
Sbjct: 70 GNKMHFRLHRKTGDLFVKEKLDRESLCGKADPCVLHFEVVLVEPLQSFRAEVRVFDINDN 129
Query: 130 SPEFPEREMTLKIPETSSLGTVFPLKKARDLDVGSNNVQNYNISPNSHFHVSTRTRGDGR 189
+P F +E LKIPE++ LG+ FPL+ A+DLDVG N +QNY +S N +FH+ TR G
Sbjct: 130 APVFLNKEPLLKIPESTPLGSRFPLQSAQDLDVGLNGLQNYTLSANGYFHLHTRFCSHGP 189
Query: 190 KYPELVLDTELDREEQAELRLTLTAVDGGSPPRSGTVQILILVLDANDNAPEFVQALYEV 249
KY ELVL+ LDREEQ E+ LT+TAVDGGSPP+SGT I ++VLD ND+ P+F + +Y
Sbjct: 190 KYAELVLNKPLDREEQPEVNLTITAVDGGSPPKSGTAHIHVVVLDVNDHVPQFSRLVYRA 249
Query: 250 QVPENSPVGSLVVKVSARDLDTGTNGEISYSLYYSSQEIDKPFELSSLSGEIRLIKKLDF 309
QV ENSP GSLV V+A DLD GTN I+YSL + + I K F++ +GE+RL LDF
Sbjct: 250 QVSENSPNGSLVATVTAVDLDEGTNKAITYSLAQNPEAILKTFQIDPQNGEVRLRGPLDF 309
Query: 310 ETMSSYDLDIEASDGGGLSGKCSVSVKVLDVNDNFPELSISSLTSPIPENSP-ETEVALF 368
E + +YD+DI+A+DGGGLS V V+V+DVNDN PE+ +SS++SP+PE+SP +T VALF
Sbjct: 310 EAIETYDIDIQATDGGGLSAHSKVLVEVVDVNDNPPEVMVSSVSSPLPEDSPPQTVVALF 369
Query: 369 RIRDRDSGENGKMICSIQDDVPFKLKPSVENFYRLVTEGALDRETRAEYNITITITDLGT 428
IRDRD GK+ C +++D+PF +KP+ N Y LVT+ +LDRE + YNITI D G
Sbjct: 370 TIRDRDIRVGGKVTCFLREDLPFVIKPTFGNSYSLVTDRSLDREEVSGYNITIVAMDTGP 429
Query: 429 PRLKTEQSITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTY 488
P L E I VL+SDVNDN P F + SY L VRENNSPA+ IG V A D D G NAQ+TY
Sbjct: 430 PSLSAETMIEVLISDVNDNPPIFREDSYILTVRENNSPAVFIGKVHAEDLDLGENAQITY 489
Query: 489 SLLPPRDPHLPLTSLVSINTDNGHLFALQSLDYEALQAFEFRVGATDRGFPALSSEALVR 548
SLLPP++ L + + +SIN+ NG L+AL+++DYEA+Q F+F V ATD GF +LSS+ VR
Sbjct: 490 SLLPPKNGDLSVFAYISINSGNGKLYALRTMDYEAIQDFQFVVKATDGGFLSLSSQVTVR 549
Query: 549 VLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK 608
V+VLD NDN P +LYPLQNG+ PC +LVPR+AE GYLVTKVVAVDGDSGQN+WLSY LLK
Sbjct: 550 VVVLDDNDNRPMILYPLQNGTLPCNDLVPRSAEAGYLVTKVVAVDGDSGQNSWLSYHLLK 609
Query: 609 ATEPGLFGVWAHNGEVRTARLLSERDVAKHRLVVLVKDNGEPPRSATATLQVLLVDGFSQ 668
AT+ GLF V NGE+ T R +SERD +L++LV+D+G+P S T +L +LLVDGFS+
Sbjct: 610 ATDLGLFSVQRQNGEIHTLRQISERDPMMQKLIILVQDHGQPALSTTVSLNILLVDGFSE 669
Query: 669 PYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVFLFVAVRLCRRSR---AASVGRC 725
PYL + + + T YLV++L +S LFL SV + + + ++ + ++
Sbjct: 670 PYLQFQDPTKHSRKVNPSTKYLVISLVILSFLFLLSVIVIFIIHVYQKIKYREKFTIQEH 729
Query: 726 SVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSESNDFKFLKPIFPN 773
+ F +LV G G+LS+ YE+C G+ +++F+FLK PN
Sbjct: 730 FYDDCNFSNNLVQGQGNGSLSRPCPYEMCSATGTGNSEFRFLKRFMPN 777
>gi|11056030 protocadherin gamma subfamily A, 2 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 673 bits (1736), Expect = 0.0
Identities = 376/791 (47%), Positives = 499/791 (63%), Gaps = 14/791 (1%)
Query: 6 ERFPEQRQVLILLLLLEVTLAGWEPR----RYSVMEETERGSFVANLANDLGLGVGELAE 61
++ P R++++L LL WE R RYSV EE +RGSFV N+A DLGL LAE
Sbjct: 5 QKLPHCRKLVLLCFLLATL---WEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALAE 61
Query: 62 RGARVVSEDNEQGLQLDLQTGQLILNEKLDREKLCGPTEPCIMHFQVLLKKPLEVFRAEL 121
+G R+VS Q L+ ++G L+ ++DRE+LC + PC+++F +LL+ L ++ E+
Sbjct: 62 QGVRIVSRGRSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVEV 121
Query: 122 LVTDINDHSPEFPEREMTLKIPETSSLGTVFPLKKARDLDVGSNNVQNYNISPNSHFHVS 181
+TDIND++P F E+ LKI ET++ G PLK A D DVG N +Q Y ++PN HF +
Sbjct: 122 EITDINDNAPRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSLD 181
Query: 182 TRTRGDGRKYPELVLDTELDREEQAELRLTLTAVDGGSPPRSGTVQILILVLDANDNAPE 241
R DG KYPELVL+ LDREE+A L L A DGG P SGT +I + VLDANDNAP
Sbjct: 182 VRRGADGNKYPELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAPV 241
Query: 242 FVQALYEVQVPENSPVGSLVVKVSARDLDTGTNGEISYSLYYSSQEIDKPFELSSLSGEI 301
F Q Y + +PEN+ VG+ ++ V+A D D G ++ Y L S E + FEL S SGE+
Sbjct: 242 FTQPEYRISIPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGEL 301
Query: 302 RLIKKLDFETMSSYDLDIEASDGGGLSGKCSVSVKVLDVNDNFPELSISSLTSPIPENS- 360
+IK LD+E + +++DIEA DG GL + V V VLDVNDN PE ++S TS + E+S
Sbjct: 302 TIIKDLDYEDATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDSL 361
Query: 361 PETEVALFRIRDRDSGENGKMICSIQDDVPFKLKPSVENFYRLVTEGALDRETRAEYNIT 420
P T + LF + DRDSG+N CS+ +D+PFKL+ SV+N+YRLVT ALDRE + YNIT
Sbjct: 362 PGTIIGLFNVHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNIT 421
Query: 421 ITITDLGTPRLKTEQSITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDS 480
+T D G P L T+ I + V+D+NDNAPAF++TSY+ ++ ENN + SV+A D DS
Sbjct: 422 LTAKDGGNPSLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPDS 481
Query: 481 GTNAQVTYSLLPPRDPHLPLTSLVSINTDNGHLFALQSLDYEALQAFEFRVGATDRGFPA 540
NA VTYS PL+S +SIN+D G L+AL+S DYE L+ + V A D G P
Sbjct: 482 NDNAHVTYSFAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNPP 541
Query: 541 LSSEALVRVLVLDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN 599
LSS + + VLD NDN+P +LYP + EL PR+AEPGYLVTKVVAVD DSGQN
Sbjct: 542 LSSNVSLSLFVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQN 601
Query: 600 AWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDVAKHRLVVLVKDNGEPPRSATATLQ 659
AWLSY LLKA+EPGLF V H GEVRTAR L +RD K LVV ++D+G+PP SAT TL
Sbjct: 602 AWLSYHLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTLT 661
Query: 660 VLLVDGFSQPYLPLPEAAPAQAQADS-LTVYLVVALASVSSLFLFSVFLFVAVRLCR--R 716
V + D L P+ DS LT+YLVVA+A+VS +FL V + +A RL R +
Sbjct: 662 VAVADRIPDILADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHK 721
Query: 717 SRAASVGRCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSESNDFKFLKPIFPN-IV 775
SR S+ G H V V G Q+Y +EV LT S + F +P + + ++
Sbjct: 722 SRLLQASGGSL-TGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
Query: 776 SQDSRRKSEFL 786
SQ+S K +FL
Sbjct: 781 SQESCEKKDFL 791
>gi|14196462 protocadherin gamma subfamily A, 2 isoform 2 precursor
[Homo sapiens]
Length = 823
Score = 673 bits (1736), Expect = 0.0
Identities = 376/791 (47%), Positives = 499/791 (63%), Gaps = 14/791 (1%)
Query: 6 ERFPEQRQVLILLLLLEVTLAGWEPR----RYSVMEETERGSFVANLANDLGLGVGELAE 61
++ P R++++L LL WE R RYSV EE +RGSFV N+A DLGL LAE
Sbjct: 5 QKLPHCRKLVLLCFLLATL---WEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALAE 61
Query: 62 RGARVVSEDNEQGLQLDLQTGQLILNEKLDREKLCGPTEPCIMHFQVLLKKPLEVFRAEL 121
+G R+VS Q L+ ++G L+ ++DRE+LC + PC+++F +LL+ L ++ E+
Sbjct: 62 QGVRIVSRGRSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVEV 121
Query: 122 LVTDINDHSPEFPEREMTLKIPETSSLGTVFPLKKARDLDVGSNNVQNYNISPNSHFHVS 181
+TDIND++P F E+ LKI ET++ G PLK A D DVG N +Q Y ++PN HF +
Sbjct: 122 EITDINDNAPRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSLD 181
Query: 182 TRTRGDGRKYPELVLDTELDREEQAELRLTLTAVDGGSPPRSGTVQILILVLDANDNAPE 241
R DG KYPELVL+ LDREE+A L L A DGG P SGT +I + VLDANDNAP
Sbjct: 182 VRRGADGNKYPELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAPV 241
Query: 242 FVQALYEVQVPENSPVGSLVVKVSARDLDTGTNGEISYSLYYSSQEIDKPFELSSLSGEI 301
F Q Y + +PEN+ VG+ ++ V+A D D G ++ Y L S E + FEL S SGE+
Sbjct: 242 FTQPEYRISIPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGEL 301
Query: 302 RLIKKLDFETMSSYDLDIEASDGGGLSGKCSVSVKVLDVNDNFPELSISSLTSPIPENS- 360
+IK LD+E + +++DIEA DG GL + V V VLDVNDN PE ++S TS + E+S
Sbjct: 302 TIIKDLDYEDATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDSL 361
Query: 361 PETEVALFRIRDRDSGENGKMICSIQDDVPFKLKPSVENFYRLVTEGALDRETRAEYNIT 420
P T + LF + DRDSG+N CS+ +D+PFKL+ SV+N+YRLVT ALDRE + YNIT
Sbjct: 362 PGTIIGLFNVHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNIT 421
Query: 421 ITITDLGTPRLKTEQSITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDS 480
+T D G P L T+ I + V+D+NDNAPAF++TSY+ ++ ENN + SV+A D DS
Sbjct: 422 LTAKDGGNPSLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPDS 481
Query: 481 GTNAQVTYSLLPPRDPHLPLTSLVSINTDNGHLFALQSLDYEALQAFEFRVGATDRGFPA 540
NA VTYS PL+S +SIN+D G L+AL+S DYE L+ + V A D G P
Sbjct: 482 NDNAHVTYSFAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNPP 541
Query: 541 LSSEALVRVLVLDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN 599
LSS + + VLD NDN+P +LYP + EL PR+AEPGYLVTKVVAVD DSGQN
Sbjct: 542 LSSNVSLSLFVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQN 601
Query: 600 AWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDVAKHRLVVLVKDNGEPPRSATATLQ 659
AWLSY LLKA+EPGLF V H GEVRTAR L +RD K LVV ++D+G+PP SAT TL
Sbjct: 602 AWLSYHLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTLT 661
Query: 660 VLLVDGFSQPYLPLPEAAPAQAQADS-LTVYLVVALASVSSLFLFSVFLFVAVRLCR--R 716
V + D L P+ DS LT+YLVVA+A+VS +FL V + +A RL R +
Sbjct: 662 VAVADRIPDILADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHK 721
Query: 717 SRAASVGRCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSESNDFKFLKPIFPN-IV 775
SR S+ G H V V G Q+Y +EV LT S + F +P + + ++
Sbjct: 722 SRLLQASGGSL-TGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
Query: 776 SQDSRRKSEFL 786
SQ+S K +FL
Sbjct: 781 SQESCEKKDFL 791
>gi|11056032 protocadherin gamma subfamily A, 1 isoform 1 precursor
[Homo sapiens]
Length = 931
Score = 661 bits (1705), Expect = 0.0
Identities = 369/784 (47%), Positives = 503/784 (64%), Gaps = 14/784 (1%)
Query: 13 QVLILLLLLEVTL-AGWEPRRYSVMEETERGSFVANLANDLGLGVGELAERGARVVSEDN 71
++++L L LE+ L AG YSV EET++GSFV N+A DLGL ELA+ G R+VS
Sbjct: 12 RLMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGVRIVSRGR 71
Query: 72 EQGLQLDLQTGQLILNEKLDREKLCGPTEPCIMHFQVLLKKPLEVFRAELLVTDINDHSP 131
L+ ++G LI ++DRE+LC + PC++ F +L++ +++F E+ + DIND++P
Sbjct: 72 MPLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEIIDINDNTP 131
Query: 132 EFPEREMTLKIPETSSLGTVFPLKKARDLDVGSNNVQNYNISPNSHFHVSTRTRGDGRKY 191
+F E+ K+ E ++ GT L +DLDVG N++Q+Y +S N HF + + DG ++
Sbjct: 132 QFQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQGADGPQH 191
Query: 192 PELVLDTELDREEQAELRLTLTAVDGGSPPRSGTVQILILVLDANDNAPEFVQALYEVQV 251
PE+VL + LDREE+A L LTA DGG P RSGT++I I V+DANDN P F QA Y + V
Sbjct: 192 PEMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQAQYHINV 251
Query: 252 PENSPVGSLVVKVSARDLDTGTNGEISYSLYYSSQEIDKPFELSSLSGEIRLIKKLDFET 311
PEN P+G+ ++ V+A D D G NGE++YS + + + F L S +GEI + LDFE
Sbjct: 252 PENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNKEPLDFEE 311
Query: 312 MSSYDLDIEASDGGGLSGKCSVSVKVLDVNDNFPELSISSLTSPIPEN-SPETEVALFRI 370
Y ++++A DG GL K V +KVLDVNDN PE++I+S+T+ +PEN P T +AL +
Sbjct: 312 YKMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGTIIALISV 371
Query: 371 RDRDSGENGKMICSIQDDVPFKLKPSVENFYRLVTEGALDRETRAEYNITITITDLGTPR 430
D+DSG+NG C I ++PFKL+ V+N+YRLVTE LDRE + YNITIT D GTP
Sbjct: 372 HDQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITAIDQGTPA 431
Query: 431 LKTEQSITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSL 490
L TE I++LV+D+NDN+P F Q SY+ ++ ENN I SV A D DS NAQ+TYSL
Sbjct: 432 LSTETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNENAQITYSL 491
Query: 491 LPPRDPHLPLTSLVSINTDNGHLFALQSLDYEALQAFEFRVGATDRGFPALSSEALVRVL 550
+ PL++ +SIN+D G L+AL+S DYE + + +V A D G P LSS + +
Sbjct: 492 IEDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSSNVSLSLF 551
Query: 551 VLDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA 609
+LD NDN+P +LYP L + EL P +AEPGYLVTKVVAVD DSGQNAWLSY+LLKA
Sbjct: 552 LLDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKA 611
Query: 610 TEPGLFGVWAHNGEVRTARLLSERDVAKHRLVVLVKDNGEPPRSATATLQVLLVDGFSQP 669
+EPGLF V H GEVRTAR L +RD K LVV V+D+G+PP SAT TL V + D S
Sbjct: 612 SEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRISDI 671
Query: 670 YLPLPEAAPAQAQADS-LTVYLVVALASVSSLFLFSVFLFVAVRLCR--RSR---AASVG 723
L P+ DS LT+YLVVA A+VS +FL V + +A RL R +SR A+ G
Sbjct: 672 LADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGG 731
Query: 724 RCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSESNDFKFLKPIFPN-IVSQDSRRK 782
S+P H V V G Q+Y +EV LT S + F +P + + ++SQ+S K
Sbjct: 732 LASMP----GSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEK 787
Query: 783 SEFL 786
FL
Sbjct: 788 KGFL 791
>gi|14196459 protocadherin gamma subfamily A, 1 isoform 2 precursor
[Homo sapiens]
Length = 823
Score = 661 bits (1705), Expect = 0.0
Identities = 369/784 (47%), Positives = 503/784 (64%), Gaps = 14/784 (1%)
Query: 13 QVLILLLLLEVTL-AGWEPRRYSVMEETERGSFVANLANDLGLGVGELAERGARVVSEDN 71
++++L L LE+ L AG YSV EET++GSFV N+A DLGL ELA+ G R+VS
Sbjct: 12 RLMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGVRIVSRGR 71
Query: 72 EQGLQLDLQTGQLILNEKLDREKLCGPTEPCIMHFQVLLKKPLEVFRAELLVTDINDHSP 131
L+ ++G LI ++DRE+LC + PC++ F +L++ +++F E+ + DIND++P
Sbjct: 72 MPLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEIIDINDNTP 131
Query: 132 EFPEREMTLKIPETSSLGTVFPLKKARDLDVGSNNVQNYNISPNSHFHVSTRTRGDGRKY 191
+F E+ K+ E ++ GT L +DLDVG N++Q+Y +S N HF + + DG ++
Sbjct: 132 QFQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQGADGPQH 191
Query: 192 PELVLDTELDREEQAELRLTLTAVDGGSPPRSGTVQILILVLDANDNAPEFVQALYEVQV 251
PE+VL + LDREE+A L LTA DGG P RSGT++I I V+DANDN P F QA Y + V
Sbjct: 192 PEMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQAQYHINV 251
Query: 252 PENSPVGSLVVKVSARDLDTGTNGEISYSLYYSSQEIDKPFELSSLSGEIRLIKKLDFET 311
PEN P+G+ ++ V+A D D G NGE++YS + + + F L S +GEI + LDFE
Sbjct: 252 PENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNKEPLDFEE 311
Query: 312 MSSYDLDIEASDGGGLSGKCSVSVKVLDVNDNFPELSISSLTSPIPEN-SPETEVALFRI 370
Y ++++A DG GL K V +KVLDVNDN PE++I+S+T+ +PEN P T +AL +
Sbjct: 312 YKMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGTIIALISV 371
Query: 371 RDRDSGENGKMICSIQDDVPFKLKPSVENFYRLVTEGALDRETRAEYNITITITDLGTPR 430
D+DSG+NG C I ++PFKL+ V+N+YRLVTE LDRE + YNITIT D GTP
Sbjct: 372 HDQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITAIDQGTPA 431
Query: 431 LKTEQSITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSL 490
L TE I++LV+D+NDN+P F Q SY+ ++ ENN I SV A D DS NAQ+TYSL
Sbjct: 432 LSTETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNENAQITYSL 491
Query: 491 LPPRDPHLPLTSLVSINTDNGHLFALQSLDYEALQAFEFRVGATDRGFPALSSEALVRVL 550
+ PL++ +SIN+D G L+AL+S DYE + + +V A D G P LSS + +
Sbjct: 492 IEDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSSNVSLSLF 551
Query: 551 VLDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA 609
+LD NDN+P +LYP L + EL P +AEPGYLVTKVVAVD DSGQNAWLSY+LLKA
Sbjct: 552 LLDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKA 611
Query: 610 TEPGLFGVWAHNGEVRTARLLSERDVAKHRLVVLVKDNGEPPRSATATLQVLLVDGFSQP 669
+EPGLF V H GEVRTAR L +RD K LVV V+D+G+PP SAT TL V + D S
Sbjct: 612 SEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRISDI 671
Query: 670 YLPLPEAAPAQAQADS-LTVYLVVALASVSSLFLFSVFLFVAVRLCR--RSR---AASVG 723
L P+ DS LT+YLVVA A+VS +FL V + +A RL R +SR A+ G
Sbjct: 672 LADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGG 731
Query: 724 RCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSESNDFKFLKPIFPN-IVSQDSRRK 782
S+P H V V G Q+Y +EV LT S + F +P + + ++SQ+S K
Sbjct: 732 LASMP----GSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEK 787
Query: 783 SEFL 786
FL
Sbjct: 788 KGFL 791
>gi|11056063 protocadherin gamma subfamily A, 7 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 657 bits (1696), Expect = 0.0
Identities = 364/793 (45%), Positives = 510/793 (64%), Gaps = 14/793 (1%)
Query: 4 AGERFPEQRQVLILLLLLEVTLAGWEPR-RYSVMEETERGSFVANLANDLGLGVGELAER 62
A R + R +L +LL W R YSV EET++GSFV ++A DLGL ELAER
Sbjct: 3 AQPRGGDYRGFFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAER 62
Query: 63 GARVVSEDNEQGLQLDLQTGQLILNEKLDREKLCGPTEPCIMHFQVLLKKPLEVFRAELL 122
G R++S Q L+ ++G L+ ++DRE++C + C+++F +L++ + ++ ++
Sbjct: 63 GVRIISRGRTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVE 122
Query: 123 VTDINDHSPEFPEREMTLKIPETSSLGTVFPLKKARDLDVGSNNVQNYNISPNSHFHVST 182
+ DIND+ P F E+ +KI E ++ G FPL +A D DVG+N++Q+Y +SPN HF ++
Sbjct: 123 IIDINDNVPRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAV 182
Query: 183 RTRGDGRKYPELVLDTELDREEQAELRLTLTAVDGGSPPRSGTVQILILVLDANDNAPEF 242
++ D KYPELVL+ LDREE+ L LTA DGG PPRS T I + V+D ND+ P F
Sbjct: 183 QSGDDETKYPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVF 242
Query: 243 VQALYEVQVPENSPVGSLVVKVSARDLDTGTNGEISYSLYYSSQEIDKPFELSSLSGEIR 302
Y+V VPEN PVG+ ++ V A DLD G NGE++YS + ++ K F L+SL+GEI
Sbjct: 243 SLPQYQVTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEIS 302
Query: 303 LIKKLDFETMSSYDLDIEASDGGGLSGKCSVSVKVLDVNDNFPELSISSLTSPIPENSP- 361
++ LD+E + Y+++++A DG G K V + VLDVNDN PE++++SL+S IPE++P
Sbjct: 303 TLEGLDYEETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPL 362
Query: 362 ETEVALFRIRDRDSGENGKMICSIQDDVPFKLKPSVENFYRLVTEGALDRETRAEYNITI 421
T +ALF ++DRDSG+NG++ C+I +++PFKL+ S++N+YRLVT LDRET + YNIT+
Sbjct: 363 GTVIALFYLQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITL 422
Query: 422 TITDLGTPRLKTEQSITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSG 481
TD GTP L E I + V+D NDN P F +SY++++ ENN I V+A D DS
Sbjct: 423 KATDGGTPPLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSE 482
Query: 482 TNAQVTYSLLPPRDPHLPLTSLVSINTDNGHLFALQSLDYEALQAFEFRVGATDRGFPAL 541
NAQ+TYSL P++S VSIN+D G L+ALQS DYE L+ + RV A D G P L
Sbjct: 483 DNAQITYSLAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPL 542
Query: 542 SSEALVRVLVLDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
SS + + VLD NDN P +LYP L + EL PR+AEPGYLVTKVVAVD DSGQNA
Sbjct: 543 SSNMSLSLFVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNA 602
Query: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDVAKHRLVVLVKDNGEPPRSATATLQV 660
WLSY LLKA+EPGLF V + GEVRTAR L +RD K LVV V+D+G+PP SAT TL V
Sbjct: 603 WLSYLLLKASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTV 662
Query: 661 LLVDGFSQPYLPLPEAAPAQAQAD-SLTVYLVVALASVSSLFLFSVFLFVAVRLCR--RS 717
+ D + L P+ + LT+YLVVA+A+VS +FL V + +A+RL R +S
Sbjct: 663 AVADSIPEVLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKS 722
Query: 718 R---AASVGRCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSESNDFKFLKPIFPN- 773
R A+ G +VP H V + G Q+Y +EV LT S + F +P + +
Sbjct: 723 RLLQASEGGLANVP----TSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDM 778
Query: 774 IVSQDSRRKSEFL 786
++SQ+S K++ L
Sbjct: 779 LISQESCEKNDSL 791
>gi|14196477 protocadherin gamma subfamily A, 7 isoform 2 precursor
[Homo sapiens]
Length = 817
Score = 657 bits (1696), Expect = 0.0
Identities = 364/793 (45%), Positives = 510/793 (64%), Gaps = 14/793 (1%)
Query: 4 AGERFPEQRQVLILLLLLEVTLAGWEPR-RYSVMEETERGSFVANLANDLGLGVGELAER 62
A R + R +L +LL W R YSV EET++GSFV ++A DLGL ELAER
Sbjct: 3 AQPRGGDYRGFFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAER 62
Query: 63 GARVVSEDNEQGLQLDLQTGQLILNEKLDREKLCGPTEPCIMHFQVLLKKPLEVFRAELL 122
G R++S Q L+ ++G L+ ++DRE++C + C+++F +L++ + ++ ++
Sbjct: 63 GVRIISRGRTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVE 122
Query: 123 VTDINDHSPEFPEREMTLKIPETSSLGTVFPLKKARDLDVGSNNVQNYNISPNSHFHVST 182
+ DIND+ P F E+ +KI E ++ G FPL +A D DVG+N++Q+Y +SPN HF ++
Sbjct: 123 IIDINDNVPRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAV 182
Query: 183 RTRGDGRKYPELVLDTELDREEQAELRLTLTAVDGGSPPRSGTVQILILVLDANDNAPEF 242
++ D KYPELVL+ LDREE+ L LTA DGG PPRS T I + V+D ND+ P F
Sbjct: 183 QSGDDETKYPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVF 242
Query: 243 VQALYEVQVPENSPVGSLVVKVSARDLDTGTNGEISYSLYYSSQEIDKPFELSSLSGEIR 302
Y+V VPEN PVG+ ++ V A DLD G NGE++YS + ++ K F L+SL+GEI
Sbjct: 243 SLPQYQVTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEIS 302
Query: 303 LIKKLDFETMSSYDLDIEASDGGGLSGKCSVSVKVLDVNDNFPELSISSLTSPIPENSP- 361
++ LD+E + Y+++++A DG G K V + VLDVNDN PE++++SL+S IPE++P
Sbjct: 303 TLEGLDYEETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPL 362
Query: 362 ETEVALFRIRDRDSGENGKMICSIQDDVPFKLKPSVENFYRLVTEGALDRETRAEYNITI 421
T +ALF ++DRDSG+NG++ C+I +++PFKL+ S++N+YRLVT LDRET + YNIT+
Sbjct: 363 GTVIALFYLQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITL 422
Query: 422 TITDLGTPRLKTEQSITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSG 481
TD GTP L E I + V+D NDN P F +SY++++ ENN I V+A D DS
Sbjct: 423 KATDGGTPPLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSE 482
Query: 482 TNAQVTYSLLPPRDPHLPLTSLVSINTDNGHLFALQSLDYEALQAFEFRVGATDRGFPAL 541
NAQ+TYSL P++S VSIN+D G L+ALQS DYE L+ + RV A D G P L
Sbjct: 483 DNAQITYSLAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPL 542
Query: 542 SSEALVRVLVLDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
SS + + VLD NDN P +LYP L + EL PR+AEPGYLVTKVVAVD DSGQNA
Sbjct: 543 SSNMSLSLFVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNA 602
Query: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDVAKHRLVVLVKDNGEPPRSATATLQV 660
WLSY LLKA+EPGLF V + GEVRTAR L +RD K LVV V+D+G+PP SAT TL V
Sbjct: 603 WLSYLLLKASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTV 662
Query: 661 LLVDGFSQPYLPLPEAAPAQAQAD-SLTVYLVVALASVSSLFLFSVFLFVAVRLCR--RS 717
+ D + L P+ + LT+YLVVA+A+VS +FL V + +A+RL R +S
Sbjct: 663 AVADSIPEVLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKS 722
Query: 718 R---AASVGRCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSESNDFKFLKPIFPN- 773
R A+ G +VP H V + G Q+Y +EV LT S + F +P + +
Sbjct: 723 RLLQASEGGLANVP----TSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDM 778
Query: 774 IVSQDSRRKSEFL 786
++SQ+S K++ L
Sbjct: 779 LISQESCEKNDSL 791
>gi|11056065 protocadherin gamma subfamily A, 6 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 656 bits (1692), Expect = 0.0
Identities = 374/789 (47%), Positives = 502/789 (63%), Gaps = 14/789 (1%)
Query: 6 ERFPEQ-RQVLILLLLLEVTLAGWEPRRYSVMEETERGSFVANLANDLGLGVGELAERGA 64
+R P++ QVL+L LL + A RYS+ EE E+GSFV N+ DLGL ELAE G
Sbjct: 5 QRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELAEHGV 64
Query: 65 RVVSEDNEQGLQLDLQTGQLILNEKLDREKLCGPTEPCIMHFQVLLKKPLEVFRAELLVT 124
R+VS Q L+ + G L+ ++DRE+LC + C++ F +L++ L ++ E+ +
Sbjct: 65 RIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVEVEIV 124
Query: 125 DINDHSPEFPEREMTLKIPETSSLGTVFPLKKARDLDVGSNNVQNYNISPNSHFHVSTRT 184
DIND++P F + E+ +KI E ++ + FPL + D DVG N++Q + +S NSHF V ++
Sbjct: 125 DINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSVDVQS 184
Query: 185 RGDGRKYPELVLDTELDREEQAELRLTLTAVDGGSPPRSGTVQILILVLDANDNAPEFVQ 244
G KYPELVL+ LDRE +A RL LTA+DGG P RS QIL+ VLD NDN P F Q
Sbjct: 185 EAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTPMFTQ 244
Query: 245 ALYEVQVPENSPVGSLVVKVSARDLDTGTNGEISYSLYYSSQEIDKPFELSSLSGEIRLI 304
+Y V VPEN PVG+ V+ V+A D D G +GE++YS +++I + F L+ L+GEI
Sbjct: 245 PVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGEISTS 304
Query: 305 KKLDFETMSSYDLDIEASDGGGLSGKCSVSVKVLDVNDNFPELSISSLTSPIPENSPE-T 363
LD+E S Y+L +EA DG GL + V + +LDVNDN PE+ ++S + I E++P T
Sbjct: 305 ANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESAPPGT 364
Query: 364 EVALFRIRDRDSGENGKMICSIQDDVPFKLKPSVENFYRLVTEGALDRETRAEYNITITI 423
+ALF++ DRDSG NG + CSI +PF+L+ SV N+YRLVT ALDRE YNIT+T
Sbjct: 365 VIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNITVTA 424
Query: 424 TDLGTPRLKTEQSITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTN 483
TD GTP L TE I++ V+D NDN P F +SY+++V ENN I SV+A D D N
Sbjct: 425 TDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPDVDQN 484
Query: 484 AQVTYSLLPPRDPHLPLTSLVSINTDNGHLFALQSLDYEALQAFEFRVGATDRGFPALSS 543
AQV+YSL PL+S VSIN+D G L+AL+S DYE L+ + V A+D G P LSS
Sbjct: 485 AQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDPPLSS 544
Query: 544 EALVRVLVLDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWL 602
+ + VLD NDN+P +LYP L + EL PR+AEPGYLVTKVVAVD DSGQNAWL
Sbjct: 545 NVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWL 604
Query: 603 SYQLLKATEPGLFGVWAHNGEVRTARLLSERDVAKHRLVVLVKDNGEPPRSATATLQVLL 662
SY+LLKA+EPGLF V H GEVRTAR L +RD K LVV V+D+G+PP SAT TL V +
Sbjct: 605 SYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAV 664
Query: 663 VDGFSQPYLPLPEAAPAQAQADS-LTVYLVVALASVSSLFLFSVFLFVAVRLCR--RSR- 718
D L P+ DS LT+YLVVA+A+VS +FL V + +A+RL R +SR
Sbjct: 665 ADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWHKSRL 724
Query: 719 --AASVGRCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSESNDFKFLKPIFPN-IV 775
A+ G S+P H V V G Q+Y +EV LT S + F +P + + ++
Sbjct: 725 LQASGGGLASMP----GSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
Query: 776 SQDSRRKSE 784
+Q+S KSE
Sbjct: 781 NQESYEKSE 789
>gi|14196474 protocadherin gamma subfamily A, 6 isoform 2 precursor
[Homo sapiens]
Length = 818
Score = 656 bits (1692), Expect = 0.0
Identities = 374/789 (47%), Positives = 502/789 (63%), Gaps = 14/789 (1%)
Query: 6 ERFPEQ-RQVLILLLLLEVTLAGWEPRRYSVMEETERGSFVANLANDLGLGVGELAERGA 64
+R P++ QVL+L LL + A RYS+ EE E+GSFV N+ DLGL ELAE G
Sbjct: 5 QRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELAEHGV 64
Query: 65 RVVSEDNEQGLQLDLQTGQLILNEKLDREKLCGPTEPCIMHFQVLLKKPLEVFRAELLVT 124
R+VS Q L+ + G L+ ++DRE+LC + C++ F +L++ L ++ E+ +
Sbjct: 65 RIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVEVEIV 124
Query: 125 DINDHSPEFPEREMTLKIPETSSLGTVFPLKKARDLDVGSNNVQNYNISPNSHFHVSTRT 184
DIND++P F + E+ +KI E ++ + FPL + D DVG N++Q + +S NSHF V ++
Sbjct: 125 DINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSVDVQS 184
Query: 185 RGDGRKYPELVLDTELDREEQAELRLTLTAVDGGSPPRSGTVQILILVLDANDNAPEFVQ 244
G KYPELVL+ LDRE +A RL LTA+DGG P RS QIL+ VLD NDN P F Q
Sbjct: 185 EAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTPMFTQ 244
Query: 245 ALYEVQVPENSPVGSLVVKVSARDLDTGTNGEISYSLYYSSQEIDKPFELSSLSGEIRLI 304
+Y V VPEN PVG+ V+ V+A D D G +GE++YS +++I + F L+ L+GEI
Sbjct: 245 PVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGEISTS 304
Query: 305 KKLDFETMSSYDLDIEASDGGGLSGKCSVSVKVLDVNDNFPELSISSLTSPIPENSPE-T 363
LD+E S Y+L +EA DG GL + V + +LDVNDN PE+ ++S + I E++P T
Sbjct: 305 ANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESAPPGT 364
Query: 364 EVALFRIRDRDSGENGKMICSIQDDVPFKLKPSVENFYRLVTEGALDRETRAEYNITITI 423
+ALF++ DRDSG NG + CSI +PF+L+ SV N+YRLVT ALDRE YNIT+T
Sbjct: 365 VIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNITVTA 424
Query: 424 TDLGTPRLKTEQSITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTN 483
TD GTP L TE I++ V+D NDN P F +SY+++V ENN I SV+A D D N
Sbjct: 425 TDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPDVDQN 484
Query: 484 AQVTYSLLPPRDPHLPLTSLVSINTDNGHLFALQSLDYEALQAFEFRVGATDRGFPALSS 543
AQV+YSL PL+S VSIN+D G L+AL+S DYE L+ + V A+D G P LSS
Sbjct: 485 AQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDPPLSS 544
Query: 544 EALVRVLVLDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWL 602
+ + VLD NDN+P +LYP L + EL PR+AEPGYLVTKVVAVD DSGQNAWL
Sbjct: 545 NVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWL 604
Query: 603 SYQLLKATEPGLFGVWAHNGEVRTARLLSERDVAKHRLVVLVKDNGEPPRSATATLQVLL 662
SY+LLKA+EPGLF V H GEVRTAR L +RD K LVV V+D+G+PP SAT TL V +
Sbjct: 605 SYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAV 664
Query: 663 VDGFSQPYLPLPEAAPAQAQADS-LTVYLVVALASVSSLFLFSVFLFVAVRLCR--RSR- 718
D L P+ DS LT+YLVVA+A+VS +FL V + +A+RL R +SR
Sbjct: 665 ADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWHKSRL 724
Query: 719 --AASVGRCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSESNDFKFLKPIFPN-IV 775
A+ G S+P H V V G Q+Y +EV LT S + F +P + + ++
Sbjct: 725 LQASGGGLASMP----GSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
Query: 776 SQDSRRKSE 784
+Q+S KSE
Sbjct: 781 NQESYEKSE 789
>gi|11128041 protocadherin gamma subfamily A, 10 isoform 1 precursor
[Homo sapiens]
Length = 936
Score = 652 bits (1683), Expect = 0.0
Identities = 362/767 (47%), Positives = 489/767 (63%), Gaps = 11/767 (1%)
Query: 26 AGWEPRRYSVMEETERGSFVANLANDLGLGVGELAERGARVVSEDNEQGLQLDLQTGQLI 85
AG YS+ EE E+GSFV N++ DLGL ELAERG R+VS Q L+ ++G LI
Sbjct: 30 AGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVSRGRTQLFSLNPRSGSLI 89
Query: 86 LNEKLDREKLCGPTEPCIMHFQVLLKKPLEVFRAELLVTDINDHSPEFPEREMTLKIPET 145
++DRE+LC + C++ F +L++ +++F E+ VTDIND++P+F + +KI E
Sbjct: 90 TAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDINDNAPKFQAENLDVKINEN 149
Query: 146 SSLGTVFPLKKARDLDVGSNNVQNYNISPNSHFHVSTRTRGDGRKYPELVLDTELDREEQ 205
+ G FPL +A D DVG N++Q+Y +SPN HF + ++R +G KYPELVL+ LDREE+
Sbjct: 150 VAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANGVKYPELVLEHSLDREEE 209
Query: 206 AELRLTLTAVDGGSPPRSGTVQILILVLDANDNAPEFVQALYEVQVPENSPVGSLVVKVS 265
A L LTA DGG P RSGTV + + V DANDNAP F Y V VPEN PVG+ ++ V+
Sbjct: 210 AIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYRVSVPENLPVGTQLLTVT 269
Query: 266 ARDLDTGTNGEISYSLYYSSQEIDKPFELSSLSGEIRLIKKLDFETMSSYDLDIEASDGG 325
A D D G NGE++YS F+L+ +GEI++ + LD+E Y+++I+A DGG
Sbjct: 270 ATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLDYEETGFYEIEIQAEDGG 329
Query: 326 GLSGKCSVSVKVLDVNDNFPELSISSLTSPIPENSP-ETEVALFRIRDRDSGENGKMICS 384
V + V DVNDN PEL+I+SL SP+ E+SP T VAL + D DS +NG++ CS
Sbjct: 330 AYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVALLNVHDLDSEQNGQVTCS 389
Query: 385 IQDDVPFKLKPSVENFYRLVTEGALDRETRAEYNITITITDLGTPRLKTEQSITVLVSDV 444
I +PFKL+ S++++YRLV ALDRE + YNIT+T TD G+P L TE + V+D+
Sbjct: 390 ILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGGSPPLSTEAHFMLQVADI 449
Query: 445 NDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPRDPHLPLTSLV 504
NDN P F+Q SY ++ ENN+ I SV+A D DS NAQ+ YSL +PL+S +
Sbjct: 450 NDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQIIYSLAEDTIQGVPLSSYI 509
Query: 505 SINTDNGHLFALQSLDYEALQAFEFRVGATDRGFPALSSEALVRVLVLDANDNSPFVLYP 564
SIN+D G L+AL+S DYE + +V A+D G P LSS + + VLD NDN+P +LYP
Sbjct: 510 SINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSLSLFVLDQNDNAPEILYP 569
Query: 565 -LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFGVWAHNGE 623
L + EL PR+AEPGYLVTKVVAVD DSGQNAWLSY+LLKA+EPGLF V H GE
Sbjct: 570 ALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFAVGEHTGE 629
Query: 624 VRTARLLSERDVAKHRLVVLVKDNGEPPRSATATLQVLLVDGFSQPYLPLPE-AAPAQAQ 682
VRTAR L +RD K LVV V+D+G+PP SAT TL V + D Q L +PA ++
Sbjct: 630 VRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVLADLGSFESPANSE 689
Query: 683 ADSLTVYLVVALASVSSLFLFSVFLFVAVRLCR----RSRAASVGRCSVPEGPFPGHLVD 738
LT+YLVVA+A+VS +FL V + +A RL R R AS G + G H V
Sbjct: 690 TSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGGLTGVSG---SHFVG 746
Query: 739 VSGTGTLSQSYQYEVCLTGGSESNDFKFLKPIFPN-IVSQDSRRKSE 784
V G Q+Y +EV LT S + F +P + + ++SQ+S K++
Sbjct: 747 VDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKND 793
>gi|14196448 protocadherin gamma subfamily A, 10 isoform 2 precursor
[Homo sapiens]
Length = 850
Score = 652 bits (1683), Expect = 0.0
Identities = 362/767 (47%), Positives = 489/767 (63%), Gaps = 11/767 (1%)
Query: 26 AGWEPRRYSVMEETERGSFVANLANDLGLGVGELAERGARVVSEDNEQGLQLDLQTGQLI 85
AG YS+ EE E+GSFV N++ DLGL ELAERG R+VS Q L+ ++G LI
Sbjct: 30 AGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVSRGRTQLFSLNPRSGSLI 89
Query: 86 LNEKLDREKLCGPTEPCIMHFQVLLKKPLEVFRAELLVTDINDHSPEFPEREMTLKIPET 145
++DRE+LC + C++ F +L++ +++F E+ VTDIND++P+F + +KI E
Sbjct: 90 TAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDINDNAPKFQAENLDVKINEN 149
Query: 146 SSLGTVFPLKKARDLDVGSNNVQNYNISPNSHFHVSTRTRGDGRKYPELVLDTELDREEQ 205
+ G FPL +A D DVG N++Q+Y +SPN HF + ++R +G KYPELVL+ LDREE+
Sbjct: 150 VAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANGVKYPELVLEHSLDREEE 209
Query: 206 AELRLTLTAVDGGSPPRSGTVQILILVLDANDNAPEFVQALYEVQVPENSPVGSLVVKVS 265
A L LTA DGG P RSGTV + + V DANDNAP F Y V VPEN PVG+ ++ V+
Sbjct: 210 AIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYRVSVPENLPVGTQLLTVT 269
Query: 266 ARDLDTGTNGEISYSLYYSSQEIDKPFELSSLSGEIRLIKKLDFETMSSYDLDIEASDGG 325
A D D G NGE++YS F+L+ +GEI++ + LD+E Y+++I+A DGG
Sbjct: 270 ATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLDYEETGFYEIEIQAEDGG 329
Query: 326 GLSGKCSVSVKVLDVNDNFPELSISSLTSPIPENSP-ETEVALFRIRDRDSGENGKMICS 384
V + V DVNDN PEL+I+SL SP+ E+SP T VAL + D DS +NG++ CS
Sbjct: 330 AYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVALLNVHDLDSEQNGQVTCS 389
Query: 385 IQDDVPFKLKPSVENFYRLVTEGALDRETRAEYNITITITDLGTPRLKTEQSITVLVSDV 444
I +PFKL+ S++++YRLV ALDRE + YNIT+T TD G+P L TE + V+D+
Sbjct: 390 ILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGGSPPLSTEAHFMLQVADI 449
Query: 445 NDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPRDPHLPLTSLV 504
NDN P F+Q SY ++ ENN+ I SV+A D DS NAQ+ YSL +PL+S +
Sbjct: 450 NDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQIIYSLAEDTIQGVPLSSYI 509
Query: 505 SINTDNGHLFALQSLDYEALQAFEFRVGATDRGFPALSSEALVRVLVLDANDNSPFVLYP 564
SIN+D G L+AL+S DYE + +V A+D G P LSS + + VLD NDN+P +LYP
Sbjct: 510 SINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSLSLFVLDQNDNAPEILYP 569
Query: 565 -LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFGVWAHNGE 623
L + EL PR+AEPGYLVTKVVAVD DSGQNAWLSY+LLKA+EPGLF V H GE
Sbjct: 570 ALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFAVGEHTGE 629
Query: 624 VRTARLLSERDVAKHRLVVLVKDNGEPPRSATATLQVLLVDGFSQPYLPLPE-AAPAQAQ 682
VRTAR L +RD K LVV V+D+G+PP SAT TL V + D Q L +PA ++
Sbjct: 630 VRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVLADLGSFESPANSE 689
Query: 683 ADSLTVYLVVALASVSSLFLFSVFLFVAVRLCR----RSRAASVGRCSVPEGPFPGHLVD 738
LT+YLVVA+A+VS +FL V + +A RL R R AS G + G H V
Sbjct: 690 TSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGGLTGVSG---SHFVG 746
Query: 739 VSGTGTLSQSYQYEVCLTGGSESNDFKFLKPIFPN-IVSQDSRRKSE 784
V G Q+Y +EV LT S + F +P + + ++SQ+S K++
Sbjct: 747 VDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKND 793
>gi|14589880 protocadherin gamma subfamily A, 3 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 650 bits (1677), Expect = 0.0
Identities = 364/779 (46%), Positives = 496/779 (63%), Gaps = 13/779 (1%)
Query: 15 LILLLLLEVTLAGWEPRRYSVMEETERGSFVANLANDLGLGVGELAERGARVVSEDNEQG 74
L+ LL + G RYSV EE ++GSFV N+ANDLGL ELAERG R+VS Q
Sbjct: 15 LLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRGRTQL 74
Query: 75 LQLDLQTGQLILNEKLDREKLCGPTEPCIMHFQVLLKKPLEVFRAELLVTDINDHSPEFP 134
L+ Q+G L+ E++DRE+LC C++ +L++ L++F E+ + DIND++P FP
Sbjct: 75 FSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNAPNFP 134
Query: 135 EREMTLKIPETSSLGTVFPLKKARDLDVGSNNVQNYNISPNSHFHVSTRTRGDGRKYPEL 194
E+ +KI E + GT FP+K A D DVG N++QNY +SPN +F ++ + +G KYPEL
Sbjct: 135 TEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAKYPEL 194
Query: 195 VLDTELDREEQAELRLTLTAVDGGSPPRSGTVQILILVLDANDNAPEFVQALYEVQVPEN 254
VL+ LDRE++ +L L A DGG P SG + I ++VLDANDN P F Q Y V V EN
Sbjct: 195 VLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVWEN 254
Query: 255 SPVGSLVVKVSARDLDTGTNGEISYSLYYSSQEIDKPFELSSLSGEIRLIKKLDFETMSS 314
PVG+ ++ V+A D D G N ++SY L +I + F L+S+SGE+ ++K LD+E
Sbjct: 255 VPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDAMF 314
Query: 315 YDLDIEASDGGGLSGKCSVSVKVLDVNDNFPELSISSLTSPIP-ENSPETEVALFRIRDR 373
Y++ IEA DG GL + + V VLDVNDN PE++I+SLTS +P E + E+AL + DR
Sbjct: 315 YEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALIDVHDR 374
Query: 374 DSGENGKMICSIQDDVPFKLKPSVENFYRLVTEGALDRETRAEYNITITITDLGTPRLKT 433
DSG+NG++ + ++PFKL+ S++ +YRLVT +LDRE +EYNI++ +D G+P L T
Sbjct: 375 DSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSPPLST 434
Query: 434 EQSITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPP 493
E IT+ V D+NDN P F SY+ ++ ENN I SV+A D DS NA++TY+L
Sbjct: 435 ETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYALTED 494
Query: 494 RDPHLPLTSLVSINTDNGHLFALQSLDYEALQAFEFRVGATDRGFPALSSEALVRVLVLD 553
PL+S VSIN++ G L+AL+S DYE + + V A+D G P LSS + + VLD
Sbjct: 495 TLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNLFVLD 554
Query: 554 ANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEP 612
NDN+P +LYP L + EL PR+AEPGYLVTKVVAVD DSGQNAWLSY+LLKA+EP
Sbjct: 555 QNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEP 614
Query: 613 GLFGVWAHNGEVRTARLLSERDVAKHRLVVLVKDNGEPPRSATATLQVLLVDGFSQPYLP 672
GLF V H GEVRTAR L +RD K LVV V+D+G+PP SAT TL V + D
Sbjct: 615 GLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDILAD 674
Query: 673 LPEAAPAQAQADS-LTVYLVVALASVSSLFLFSVFLFVAVRLCR--RSR---AASVGRCS 726
L P+ DS LT+YLVVA+A+VS +FL V + +A+RL R +SR A+ G S
Sbjct: 675 LGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGGGLAS 734
Query: 727 VPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSESNDFKFLKPIFPN-IVSQDSRRKSE 784
P H V G Q+Y +EV LT S + F +P + + ++SQ+S KSE
Sbjct: 735 TP----GSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSE 789
>gi|14196465 protocadherin gamma subfamily A, 3 isoform 2 precursor
[Homo sapiens]
Length = 829
Score = 650 bits (1677), Expect = 0.0
Identities = 364/779 (46%), Positives = 496/779 (63%), Gaps = 13/779 (1%)
Query: 15 LILLLLLEVTLAGWEPRRYSVMEETERGSFVANLANDLGLGVGELAERGARVVSEDNEQG 74
L+ LL + G RYSV EE ++GSFV N+ANDLGL ELAERG R+VS Q
Sbjct: 15 LLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRGRTQL 74
Query: 75 LQLDLQTGQLILNEKLDREKLCGPTEPCIMHFQVLLKKPLEVFRAELLVTDINDHSPEFP 134
L+ Q+G L+ E++DRE+LC C++ +L++ L++F E+ + DIND++P FP
Sbjct: 75 FSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNAPNFP 134
Query: 135 EREMTLKIPETSSLGTVFPLKKARDLDVGSNNVQNYNISPNSHFHVSTRTRGDGRKYPEL 194
E+ +KI E + GT FP+K A D DVG N++QNY +SPN +F ++ + +G KYPEL
Sbjct: 135 TEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAKYPEL 194
Query: 195 VLDTELDREEQAELRLTLTAVDGGSPPRSGTVQILILVLDANDNAPEFVQALYEVQVPEN 254
VL+ LDRE++ +L L A DGG P SG + I ++VLDANDN P F Q Y V V EN
Sbjct: 195 VLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVWEN 254
Query: 255 SPVGSLVVKVSARDLDTGTNGEISYSLYYSSQEIDKPFELSSLSGEIRLIKKLDFETMSS 314
PVG+ ++ V+A D D G N ++SY L +I + F L+S+SGE+ ++K LD+E
Sbjct: 255 VPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDAMF 314
Query: 315 YDLDIEASDGGGLSGKCSVSVKVLDVNDNFPELSISSLTSPIP-ENSPETEVALFRIRDR 373
Y++ IEA DG GL + + V VLDVNDN PE++I+SLTS +P E + E+AL + DR
Sbjct: 315 YEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALIDVHDR 374
Query: 374 DSGENGKMICSIQDDVPFKLKPSVENFYRLVTEGALDRETRAEYNITITITDLGTPRLKT 433
DSG+NG++ + ++PFKL+ S++ +YRLVT +LDRE +EYNI++ +D G+P L T
Sbjct: 375 DSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSPPLST 434
Query: 434 EQSITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPP 493
E IT+ V D+NDN P F SY+ ++ ENN I SV+A D DS NA++TY+L
Sbjct: 435 ETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYALTED 494
Query: 494 RDPHLPLTSLVSINTDNGHLFALQSLDYEALQAFEFRVGATDRGFPALSSEALVRVLVLD 553
PL+S VSIN++ G L+AL+S DYE + + V A+D G P LSS + + VLD
Sbjct: 495 TLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNLFVLD 554
Query: 554 ANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEP 612
NDN+P +LYP L + EL PR+AEPGYLVTKVVAVD DSGQNAWLSY+LLKA+EP
Sbjct: 555 QNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEP 614
Query: 613 GLFGVWAHNGEVRTARLLSERDVAKHRLVVLVKDNGEPPRSATATLQVLLVDGFSQPYLP 672
GLF V H GEVRTAR L +RD K LVV V+D+G+PP SAT TL V + D
Sbjct: 615 GLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDILAD 674
Query: 673 LPEAAPAQAQADS-LTVYLVVALASVSSLFLFSVFLFVAVRLCR--RSR---AASVGRCS 726
L P+ DS LT+YLVVA+A+VS +FL V + +A+RL R +SR A+ G S
Sbjct: 675 LGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGGGLAS 734
Query: 727 VPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSESNDFKFLKPIFPN-IVSQDSRRKSE 784
P H V G Q+Y +EV LT S + F +P + + ++SQ+S KSE
Sbjct: 735 TP----GSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSE 789
>gi|11128043 protocadherin gamma subfamily A, 9 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 647 bits (1670), Expect = 0.0
Identities = 364/781 (46%), Positives = 496/781 (63%), Gaps = 17/781 (2%)
Query: 17 LLLLLEVTLAGWEPR----RYSVMEETERGSFVANLANDLGLGVGELAERGARVVSEDNE 72
L+LL + WE R RYSV EETE+G V N++ DL L ELAER R+VS
Sbjct: 13 LVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELAERRVRIVSRGRT 72
Query: 73 QGLQLDLQTGQLILNEKLDREKLCGPTEPCIMHFQVLLKKPLEVFRAELLVTDINDHSPE 132
Q L+ ++G L+ ++DRE+LC + C+++F+VL++ ++++ E+ VTDIND +P+
Sbjct: 73 QLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIEIEVTDINDSAPK 132
Query: 133 FPEREMTLKIPETSSLGTVFPLKKARDLDVGSNNVQNYNISPNSHFHVSTRTRGDGRKYP 192
F + +KI E + G +PL +A D DVG N++Q+Y +SPN HF ++ +T +G P
Sbjct: 133 FQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSLNVQTGDNGAINP 192
Query: 193 ELVLDTELDREEQAELRLTLTAVDGGSPPRSGTVQILILVLDANDNAPEFVQALYEVQVP 252
ELVL+ LDREE L LTA DGG P RS TV+I + VLD NDNAP F Q +Y V+V
Sbjct: 193 ELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPVFAQRIYRVKVL 252
Query: 253 ENSPVGSLVVKVSARDLDTGTNGEISYSLYYSSQEIDKPFELSSLSGEIRLIKKLDFETM 312
EN P G+ ++ +A DLD G NG+++Y + +++ F+L+ +GEI K LD+E
Sbjct: 253 ENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGEISTAKSLDYEEC 312
Query: 313 SSYDLDIEASDGGGLSGKCSVSVKVLDVNDNFPELSISSLTSPIPENSPE-TEVALFRIR 371
S Y+++I+A DGGGL G V + V DVNDN PE++I+SL SP+ E++P+ T + LF
Sbjct: 313 SFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDAPQGTVILLFNAH 372
Query: 372 DRDSGENGKMICSIQDDVPFKLKPSVENFYRLVTEGALDRETRAEYNITITITDLGTPRL 431
DRDSG+NG+++CSIQ+++ F L+ S E++YRL+T LDRE +EYNIT+T TD GTP L
Sbjct: 373 DRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNITVTATDRGTPPL 432
Query: 432 KTEQSITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLL 491
TE IT+ V+D+NDN PAF+Q SY++++ ENN+ I SV A D DS N++V YSL
Sbjct: 433 STEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPDSNENSRVIYSLA 492
Query: 492 PPRDPHLPLTSLVSINTDNGHLFALQSLDYEALQAFEFRVGATDRGFPALSSEALVRVLV 551
PL++ VSIN+D G L+AL S DYE + + +V A+D G P LSS +R+ V
Sbjct: 493 EDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSPPLSSNVSLRLFV 552
Query: 552 LDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKAT 610
LD NDN+P +LYP L + EL PR+AEPGYLVTKVVAVD DSGQNAWLSY+L KA+
Sbjct: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLFKAS 612
Query: 611 EPGLFGVWAHNGEVRTARLLSERDVAKHRLVVLVKDNGEPPRSATATLQVLLVDGFSQPY 670
EPGLF V H GEVRTAR L +RD K LVV V+D+G+PP SAT TL V + D
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAIADSIPDIL 672
Query: 671 LPLPE-AAPAQAQADSLTVYLVVALASVSSLFLFSVFLFVAVRL-----CRRSRAASVGR 724
L PA +A LT+YLVVA+A VS +FL V +A+RL RA S G
Sbjct: 673 ADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWHSSHLLRATSDGL 732
Query: 725 CSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSESNDFKFLKPIFPN-IVSQDSRRKS 783
VP H V V G Q+Y E LT S + F +P + + ++SQ S K+
Sbjct: 733 AGVP----TSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLISQQSCEKN 788
Query: 784 E 784
E
Sbjct: 789 E 789
>gi|14270487 protocadherin gamma subfamily A, 9 isoform 2 precursor
[Homo sapiens]
Length = 828
Score = 647 bits (1670), Expect = 0.0
Identities = 364/781 (46%), Positives = 496/781 (63%), Gaps = 17/781 (2%)
Query: 17 LLLLLEVTLAGWEPR----RYSVMEETERGSFVANLANDLGLGVGELAERGARVVSEDNE 72
L+LL + WE R RYSV EETE+G V N++ DL L ELAER R+VS
Sbjct: 13 LVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELAERRVRIVSRGRT 72
Query: 73 QGLQLDLQTGQLILNEKLDREKLCGPTEPCIMHFQVLLKKPLEVFRAELLVTDINDHSPE 132
Q L+ ++G L+ ++DRE+LC + C+++F+VL++ ++++ E+ VTDIND +P+
Sbjct: 73 QLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIEIEVTDINDSAPK 132
Query: 133 FPEREMTLKIPETSSLGTVFPLKKARDLDVGSNNVQNYNISPNSHFHVSTRTRGDGRKYP 192
F + +KI E + G +PL +A D DVG N++Q+Y +SPN HF ++ +T +G P
Sbjct: 133 FQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSLNVQTGDNGAINP 192
Query: 193 ELVLDTELDREEQAELRLTLTAVDGGSPPRSGTVQILILVLDANDNAPEFVQALYEVQVP 252
ELVL+ LDREE L LTA DGG P RS TV+I + VLD NDNAP F Q +Y V+V
Sbjct: 193 ELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPVFAQRIYRVKVL 252
Query: 253 ENSPVGSLVVKVSARDLDTGTNGEISYSLYYSSQEIDKPFELSSLSGEIRLIKKLDFETM 312
EN P G+ ++ +A DLD G NG+++Y + +++ F+L+ +GEI K LD+E
Sbjct: 253 ENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGEISTAKSLDYEEC 312
Query: 313 SSYDLDIEASDGGGLSGKCSVSVKVLDVNDNFPELSISSLTSPIPENSPE-TEVALFRIR 371
S Y+++I+A DGGGL G V + V DVNDN PE++I+SL SP+ E++P+ T + LF
Sbjct: 313 SFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDAPQGTVILLFNAH 372
Query: 372 DRDSGENGKMICSIQDDVPFKLKPSVENFYRLVTEGALDRETRAEYNITITITDLGTPRL 431
DRDSG+NG+++CSIQ+++ F L+ S E++YRL+T LDRE +EYNIT+T TD GTP L
Sbjct: 373 DRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNITVTATDRGTPPL 432
Query: 432 KTEQSITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLL 491
TE IT+ V+D+NDN PAF+Q SY++++ ENN+ I SV A D DS N++V YSL
Sbjct: 433 STEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPDSNENSRVIYSLA 492
Query: 492 PPRDPHLPLTSLVSINTDNGHLFALQSLDYEALQAFEFRVGATDRGFPALSSEALVRVLV 551
PL++ VSIN+D G L+AL S DYE + + +V A+D G P LSS +R+ V
Sbjct: 493 EDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSPPLSSNVSLRLFV 552
Query: 552 LDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKAT 610
LD NDN+P +LYP L + EL PR+AEPGYLVTKVVAVD DSGQNAWLSY+L KA+
Sbjct: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLFKAS 612
Query: 611 EPGLFGVWAHNGEVRTARLLSERDVAKHRLVVLVKDNGEPPRSATATLQVLLVDGFSQPY 670
EPGLF V H GEVRTAR L +RD K LVV V+D+G+PP SAT TL V + D
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAIADSIPDIL 672
Query: 671 LPLPE-AAPAQAQADSLTVYLVVALASVSSLFLFSVFLFVAVRL-----CRRSRAASVGR 724
L PA +A LT+YLVVA+A VS +FL V +A+RL RA S G
Sbjct: 673 ADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWHSSHLLRATSDGL 732
Query: 725 CSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSESNDFKFLKPIFPN-IVSQDSRRKS 783
VP H V V G Q+Y E LT S + F +P + + ++SQ S K+
Sbjct: 733 AGVP----TSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLISQQSCEKN 788
Query: 784 E 784
E
Sbjct: 789 E 789
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.134 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,745,680
Number of Sequences: 37866
Number of extensions: 1359678
Number of successful extensions: 10308
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 187
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 3188
Number of HSP's gapped (non-prelim): 709
length of query: 787
length of database: 18,247,518
effective HSP length: 110
effective length of query: 677
effective length of database: 14,082,258
effective search space: 9533688666
effective search space used: 9533688666
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.