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Search of human proteins with 91822911
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|91822911 JAZF zinc finger 1 [Homo sapiens]
(243 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|91822911 JAZF zinc finger 1 [Homo sapiens] 500 e-142
gi|112734859 zinc finger protein 654 [Homo sapiens] 55 7e-08
gi|116014328 zinc finger protein 143 [Homo sapiens] 47 2e-05
gi|21361146 zinc finger protein 76 (expressed in testis) [Homo s... 45 6e-05
gi|110347459 MYC-associated zinc finger protein isoform 2 [Homo ... 45 7e-05
gi|110347461 MYC-associated zinc finger protein isoform 1 [Homo ... 45 7e-05
gi|119393899 GLI-Kruppel family member GLI3 [Homo sapiens] 44 2e-04
gi|110431364 GLIS family zinc finger 2 [Homo sapiens] 43 3e-04
gi|14249386 zinc finger protein 496 [Homo sapiens] 42 4e-04
gi|153945755 zinc finger protein 608 [Homo sapiens] 42 6e-04
gi|71725360 zinc finger protein 609 [Homo sapiens] 41 8e-04
gi|21687161 zinc finger protein 625 [Homo sapiens] 41 8e-04
gi|229892345 GLI family zinc finger 1 isoform 2 [Homo sapiens] 41 0.001
gi|4885279 GLI family zinc finger 1 isoform 1 [Homo sapiens] 41 0.001
gi|118766337 zinc finger protein of the cerebellum 5 [Homo sapiens] 41 0.001
gi|90193619 nuclear matrix transcription factor 4 isoform c [Hom... 40 0.001
gi|90193617 nuclear matrix transcription factor 4 isoform b [Hom... 40 0.001
gi|90193615 nuclear matrix transcription factor 4 isoform b [Hom... 40 0.001
gi|90193613 nuclear matrix transcription factor 4 isoform a [Hom... 40 0.001
gi|90193611 nuclear matrix transcription factor 4 isoform a [Hom... 40 0.001
gi|36054194 nuclear matrix transcription factor 4 isoform a [Hom... 40 0.001
gi|209180475 nuclear matrix transcription factor 4 isoform d [Ho... 40 0.001
gi|56118214 zinc finger protein 161 [Homo sapiens] 40 0.001
gi|38570115 zinc finger protein 362 [Homo sapiens] 40 0.001
gi|22547182 zinc finger protein of the cerebellum 1 [Homo sapiens] 40 0.002
gi|48717244 zinc finger protein 782 [Homo sapiens] 40 0.002
gi|4507973 zinc finger protein of the cerebellum 3 [Homo sapiens] 40 0.002
gi|157276588 basonuclin 1 [Homo sapiens] 40 0.002
gi|86991432 GLI-Kruppel family member GLI2 [Homo sapiens] 40 0.002
gi|166706915 GLIS family zinc finger 1 [Homo sapiens] 40 0.002
>gi|91822911 JAZF zinc finger 1 [Homo sapiens]
Length = 243
Score = 500 bits (1288), Expect = e-142
Identities = 243/243 (100%), Positives = 243/243 (100%)
Query: 1 MTGIAAASFFSNTCRFGGCGLHFPTLADLIEHIEDNHIDTDPRVLEKQELQQPTYVALSY 60
MTGIAAASFFSNTCRFGGCGLHFPTLADLIEHIEDNHIDTDPRVLEKQELQQPTYVALSY
Sbjct: 1 MTGIAAASFFSNTCRFGGCGLHFPTLADLIEHIEDNHIDTDPRVLEKQELQQPTYVALSY 60
Query: 61 INRFMTDAARREQESLKKKIQPKLSLTLSSSVSRGNVSTPPRHSSGSLTPPVTPPITPSS 120
INRFMTDAARREQESLKKKIQPKLSLTLSSSVSRGNVSTPPRHSSGSLTPPVTPPITPSS
Sbjct: 61 INRFMTDAARREQESLKKKIQPKLSLTLSSSVSRGNVSTPPRHSSGSLTPPVTPPITPSS 120
Query: 121 SFRSSTPTGSEYDEEEVDYEESDSDESWTTESAISSEAILSSMCMNGGEEKPFACPVPGC 180
SFRSSTPTGSEYDEEEVDYEESDSDESWTTESAISSEAILSSMCMNGGEEKPFACPVPGC
Sbjct: 121 SFRSSTPTGSEYDEEEVDYEESDSDESWTTESAISSEAILSSMCMNGGEEKPFACPVPGC 180
Query: 181 KKRYKNVNGIKYHAKNGHRTQIRVRKPFKCRCGKSYKTAQGLRHHTINFHPPVSAEIIRK 240
KKRYKNVNGIKYHAKNGHRTQIRVRKPFKCRCGKSYKTAQGLRHHTINFHPPVSAEIIRK
Sbjct: 181 KKRYKNVNGIKYHAKNGHRTQIRVRKPFKCRCGKSYKTAQGLRHHTINFHPPVSAEIIRK 240
Query: 241 MQQ 243
MQQ
Sbjct: 241 MQQ 243
>gi|112734859 zinc finger protein 654 [Homo sapiens]
Length = 581
Score = 54.7 bits (130), Expect = 7e-08
Identities = 63/241 (26%), Positives = 103/241 (42%), Gaps = 37/241 (15%)
Query: 19 CGLHFPTLADLIEHIEDNHIDTDPR---VLEKQELQQPTYVALSYINRFMTDAARREQES 75
CG F + +H++ NH+ R +Q+ Q+ T AL IN + + S
Sbjct: 30 CGRKFRNRGLMQKHLK-NHVKKIQRQQIAAAQQDDQEVT--ALEEINCSSSSISFENGNS 86
Query: 76 LKKKIQPKLSLTLSSSVSRGNVSTPPRHSSGSLTPPVTPPI----------TPSSS---- 121
K ++ + TL++S S GN P H + + P++ P +P++S
Sbjct: 87 DSKDLEVE---TLTAS-SEGNKEVIPEHVAEFIEIPISVPEDVIENVIENGSPNNSLNNV 142
Query: 122 FRSSTPTGSEYDEEEV---DYEESDSDESWTTE--SAISSEAILSSMCMNGGEEKPFACP 176
F+ T G +Y+EEE DYEE D D + T I+ +E F CP
Sbjct: 143 FKPLTECGDDYEEEEDEEGDYEEDDYDLNQETSVIHKINGTVCHPKDIYATDQEGNFKCP 202
Query: 177 VPGCKKRYKNVNGIKYHAKNGHRTQIRVRKPF------KCR-CGKSYKTAQGLRHHTINF 229
GC + +K + + HA H T + VR+ KC+ C + ++ +Q H +N
Sbjct: 203 ALGCVRIFKRIGFLNKHAMTVHPTDLNVRQTVMKWSKGKCKFCQRQFEDSQHFIDH-LNR 261
Query: 230 H 230
H
Sbjct: 262 H 262
>gi|116014328 zinc finger protein 143 [Homo sapiens]
Length = 638
Score = 46.6 bits (109), Expect = 2e-05
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 8/63 (12%)
Query: 170 EKPFACPVPGCKKRYKNVNGI-KYHAKNGHRTQIRVRKPFKC-RCGKSYKTAQGLRHHTI 227
EKP+ C VPGC KR+ + + K+H + H KP+ C CGK+YK L H
Sbjct: 384 EKPYVCTVPGCDKRFTEYSSLYKHHVVHTH------SKPYNCNHCGKTYKQISTLAMHKR 437
Query: 228 NFH 230
H
Sbjct: 438 TAH 440
Score = 38.9 bits (89), Expect = 0.004
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 8/59 (13%)
Query: 170 EKPFACPVPGCKKRYKNVNGIKYHAKNGHRTQIRVRKPFKCR---CGKSYKTAQGLRHH 225
EK F C GC K Y + +K H ++ H +P++C CGK++ T GL+ H
Sbjct: 234 EKAFRCEYDGCGKLYTTAHHLKVHERS-HTGD----RPYQCEHAGCGKAFATGYGLKSH 287
Score = 36.6 bits (83), Expect = 0.020
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 8/59 (13%)
Query: 170 EKPFACPVPGCKKRYKNVNGIKYHAKNGHRTQIRVRKPFKC---RCGKSYKTAQGLRHH 225
++P+ C GC K + G+K H + H + KP++C C KS+KT+ L+ H
Sbjct: 264 DRPYQCEHAGCGKAFATGYGLKSHVRT-HTGE----KPYRCSEDNCTKSFKTSGDLQKH 317
Score = 34.7 bits (78), Expect = 0.077
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 8/59 (13%)
Query: 170 EKPFACPVPGCKKRYKNVNGIKYHAKNGHRTQIRVRKPFKCR---CGKSYKTAQGLRHH 225
E+PF CP GC + + N K H + H + +P+ C CG+++ +A ++H
Sbjct: 324 ERPFKCPFEGCGRSFTTSNIRKVHVRT-HTGE----RPYYCTEPGCGRAFASATNYKNH 377
Score = 33.1 bits (74), Expect = 0.22
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 8/59 (13%)
Query: 170 EKPFACPVPGCKKRYKNVNGIKYHAKNGHRTQIRVRKPFKC---RCGKSYKTAQGLRHH 225
EKP+ C C K +K ++ H + H + +PFKC CG+S+ T+ + H
Sbjct: 294 EKPYRCSEDNCTKSFKTSGDLQKHIRT-HTGE----RPFKCPFEGCGRSFTTSNIRKVH 347
Score = 32.3 bits (72), Expect = 0.38
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 9/65 (13%)
Query: 170 EKPFACPVPGCKKRYKNVNGIKYHAKNGHRTQIRVRKPFKCR---CGKSYKTAQGL-RHH 225
E+P+ C PGC + + + K H + H + KP+ C C K + L +HH
Sbjct: 354 ERPYYCTEPGCGRAFASATNYKNHVRI-HTGE----KPYVCTVPGCDKRFTEYSSLYKHH 408
Query: 226 TINFH 230
++ H
Sbjct: 409 VVHTH 413
>gi|21361146 zinc finger protein 76 (expressed in testis) [Homo
sapiens]
Length = 570
Score = 45.1 bits (105), Expect = 6e-05
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 8/68 (11%)
Query: 170 EKPFACPVPGCKKRYKNVNGI-KYHAKNGHRTQIRVRKPFKC-RCGKSYKTAQGLRHHTI 227
EKP+ C VPGC KR+ + + K+H + H KP+ C CGK+Y+ L H
Sbjct: 312 EKPYVCTVPGCGKRFTEYSSLYKHHVVHTH------CKPYTCSTCGKTYRQTSTLAMHKR 365
Query: 228 NFHPPVSA 235
+ H + A
Sbjct: 366 SAHGELEA 373
Score = 38.1 bits (87), Expect = 0.007
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 8/59 (13%)
Query: 170 EKPFACPVPGCKKRYKNVNGIKYHAKNGHRTQIRVRKPFKC---RCGKSYKTAQGLRHH 225
++P+ C P C K + G+K H + H + KP+KC C K++KT+ L+ H
Sbjct: 192 DRPYRCDFPSCGKAFATGYGLKSHVRT-HTGE----KPYKCPEELCSKAFKTSGDLQKH 245
Score = 37.7 bits (86), Expect = 0.009
Identities = 29/122 (23%), Positives = 50/122 (40%), Gaps = 17/122 (13%)
Query: 114 PPITPSSSFRSSTPTGSEYDEEEVDYEESDSDESWTTESAISSEAILSSMCMNGGE---- 169
P PS S + T ++ + +E S ++ +S+ + S G+
Sbjct: 101 PVAVPSESTILAVQTEVGLEDLAAEDDEGFSADAVVALEQYASKVLHDSQIPRNGKGQQV 160
Query: 170 -EKPFACPVPGCKKRYKNVNGIKYH--AKNGHRTQIRVRKPFKC---RCGKSYKTAQGLR 223
++ F C GC + Y + +K H A G R P++C CGK++ T GL+
Sbjct: 161 GDRAFRCGYKGCGRLYTTAHHLKVHERAHTGDR-------PYRCDFPSCGKAFATGYGLK 213
Query: 224 HH 225
H
Sbjct: 214 SH 215
Score = 35.4 bits (80), Expect = 0.045
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 9/65 (13%)
Query: 170 EKPFACPVPGCKKRYKNVNGIKYHAKNGHRTQIRVRKPFKCR---CGKSYKTAQGL-RHH 225
E+P+ CP P C + + + K H + H + KP+ C CGK + L +HH
Sbjct: 282 ERPYTCPEPHCGRGFTSATNYKNHVRI-HTGE----KPYVCTVPGCGKRFTEYSSLYKHH 336
Query: 226 TINFH 230
++ H
Sbjct: 337 VVHTH 341
Score = 35.0 bits (79), Expect = 0.059
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 8/59 (13%)
Query: 170 EKPFACPVPGCKKRYKNVNGIKYHAKNGHRTQIRVRKPFKC---RCGKSYKTAQGLRHH 225
E+PF CP GC + + N K H + H + +P+ C CG+ + +A ++H
Sbjct: 252 ERPFQCPFEGCGRSFTTSNIRKVHVRT-HTGE----RPYTCPEPHCGRGFTSATNYKNH 305
Score = 33.9 bits (76), Expect = 0.13
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 8/59 (13%)
Query: 170 EKPFACPVPGCKKRYKNVNGIKYHAKNGHRTQIRVRKPFKC---RCGKSYKTAQGLRHH 225
EKP+ CP C K +K ++ H + H + +PF+C CG+S+ T+ + H
Sbjct: 222 EKPYKCPEELCSKAFKTSGDLQKHVRT-HTGE----RPFQCPFEGCGRSFTTSNIRKVH 275
>gi|110347459 MYC-associated zinc finger protein isoform 2 [Homo
sapiens]
Length = 493
Score = 44.7 bits (104), Expect = 7e-05
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
Query: 165 MNGGEEKPFACPVPGCKKRYKNVNGIKYHAKNGHRTQIRVRKPFKC-RCGKSYKTAQGLR 223
++ +EKP+ CPV C++R+K + + YH ++ V KP+ C CGKS+ L
Sbjct: 299 LSHSDEKPYQCPV--CQQRFKRKDRMSYHVRSHDGA---VHKPYNCSHCGKSFSRPDHLN 353
Query: 224 HHTINFH 230
H H
Sbjct: 354 SHVRQVH 360
>gi|110347461 MYC-associated zinc finger protein isoform 1 [Homo
sapiens]
Length = 477
Score = 44.7 bits (104), Expect = 7e-05
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
Query: 165 MNGGEEKPFACPVPGCKKRYKNVNGIKYHAKNGHRTQIRVRKPFKC-RCGKSYKTAQGLR 223
++ +EKP+ CPV C++R+K + + YH ++ V KP+ C CGKS+ L
Sbjct: 299 LSHSDEKPYQCPV--CQQRFKRKDRMSYHVRSHDGA---VHKPYNCSHCGKSFSRPDHLN 353
Query: 224 HHTINFH 230
H H
Sbjct: 354 SHVRQVH 360
>gi|119393899 GLI-Kruppel family member GLI3 [Homo sapiens]
Length = 1580
Score = 43.5 bits (101), Expect = 2e-04
Identities = 43/197 (21%), Positives = 75/197 (38%), Gaps = 34/197 (17%)
Query: 10 FSNTCRFGGCGLHFPTLADLIEHIEDNHIDTDPRVLEKQELQQPTYVALSYINRFMTDAA 69
+ C + GC F T L+ HI ++HI EK+E ++ R++
Sbjct: 478 YETNCHWEGCAREFDTQEQLVHHINNDHIHG-----EKKE----------FVCRWLD--C 520
Query: 70 RREQESLKKKIQPKLSLTLSSSVSRGNVSTPPRHSSGSLTPPVTPPITPSSSFRSSTPTG 129
REQ+ K + L + R P + + T + + RS T
Sbjct: 521 SREQKPFKAQYM------LVVHMRRHTGEKPHKCTFEGCTKAYSRLENLKTHLRSHT--- 571
Query: 130 SEYDEEEVDYEESDSDESWTTESAISSEAILSSMCMNGGEEKPFACPVPGCKKRYKNVNG 189
E+ E +++++ S + + EKP+ C +PGC KRY + +
Sbjct: 572 ---GEKPYVCEHEGCNKAFSNASDRAKHQNRTH-----SNEKPYVCKIPGCTKRYTDPSS 623
Query: 190 IKYHAKNGHRTQIRVRK 206
++ H K H + V K
Sbjct: 624 LRKHVKTVHGPEAHVTK 640
Score = 35.0 bits (79), Expect = 0.059
Identities = 27/103 (26%), Positives = 36/103 (34%), Gaps = 32/103 (31%)
Query: 170 EKPFACPVPGCKKRYKNVNGIKYH---------------------------AKNGHRTQI 202
EKP C GC K Y + +K H AK+ +RT
Sbjct: 543 EKPHKCTFEGCTKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHS 602
Query: 203 RVRKPFKCR---CGKSYKTAQGLRHHTINFHPPVSAEIIRKMQ 242
KP+ C+ C K Y LR H H P A + +K +
Sbjct: 603 N-EKPYVCKIPGCTKRYTDPSSLRKHVKTVHGP-EAHVTKKQR 643
Score = 30.0 bits (66), Expect = 1.9
Identities = 31/140 (22%), Positives = 47/140 (33%), Gaps = 17/140 (12%)
Query: 101 PRHSSGSLTPPVTPPITPSSSFRSSTPTGSEYDEEEVDYEESDSDESWTTESAISSEAIL 160
P H+ S P +P + + P G+ +EE D +ES + E+ E
Sbjct: 429 PMHNKRSKIKPDEDLPSPGARGQQEQPEGTTLVKEEGDKDESKQEPEVIYETNCHWEGCA 488
Query: 161 SSMCMN------------GGEEKPFACPVPGCKKRYKNVNGIKYHAKNGHRTQIRVRKPF 208
GE+K F C C + K + H + KP
Sbjct: 489 REFDTQEQLVHHINNDHIHGEKKEFVCRWLDCSREQKPFKA--QYMLVVHMRRHTGEKPH 546
Query: 209 KCR---CGKSYKTAQGLRHH 225
KC C K+Y + L+ H
Sbjct: 547 KCTFEGCTKAYSRLENLKTH 566
>gi|110431364 GLIS family zinc finger 2 [Homo sapiens]
Length = 524
Score = 42.7 bits (99), Expect = 3e-04
Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 8/59 (13%)
Query: 170 EKPFACPVPGCKKRYKNVNGIKYHAKNGHRTQIRVRKPFKCR---CGKSYKTAQGLRHH 225
EKP+ CP GC KRY N + H + + V KP+ C+ C K Y LR H
Sbjct: 260 EKPYVCPYEGCNKRYSNSSDRFKHTRTHY-----VDKPYYCKMPGCHKRYTDPSSLRKH 313
Score = 34.7 bits (78), Expect = 0.077
Identities = 13/30 (43%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query: 170 EKPFACPVPGCKKRYKNVNGIKYHAK-NGH 198
+KP+ C +PGC KRY + + ++ H K +GH
Sbjct: 290 DKPYYCKMPGCHKRYTDPSSLRKHIKAHGH 319
Score = 29.6 bits (65), Expect = 2.5
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 14 CRFGGCGLHFPTLADLIEHIEDNHI 38
CR+ C F L DL++H+ D H+
Sbjct: 170 CRWAKCNQLFELLQDLVDHVNDYHV 194
>gi|14249386 zinc finger protein 496 [Homo sapiens]
Length = 587
Score = 42.4 bits (98), Expect = 4e-04
Identities = 56/225 (24%), Positives = 87/225 (38%), Gaps = 43/225 (19%)
Query: 39 DTDPRVLEKQELQQPTYVALSYINR-----FMTDAARREQESLKKKIQ--PKLSLTLSSS 91
+ +PRV E Q+LQ +SY++ F + R+ +E + Q P+ + ++
Sbjct: 275 ENEPRVPELQDLQGKEVPQVSYLDSPSLQPFQVEERRKREELQVPEFQACPQTVVPQNTY 334
Query: 92 VSRGNVSTPPRHSSGSLTPPVTPPITPSSSFRSSTPTGSEYDEE-----EVDYEESDSDE 146
+ GN PR SL VT I SSS + G EE E S
Sbjct: 335 PAGGN----PRSLENSLDEEVTIEIVLSSSGDEDSQHGPYCTEELGSPTEKQRSLPASHR 390
Query: 147 SWTTESAISSEAILSSMCMNGG------------------EEKPFACPVPGCKKRYKNVN 188
S T + S +C N G +EKP C V C + + +
Sbjct: 391 SSTEAGGEVQTSKKSYVCPNCGKIFRWRVNFIRHLRSRREQEKPHECSV--CGELFSDSE 448
Query: 189 GIKYHAKNGHRTQIRVRKPFKC-RCGKSYK-TAQGLRHHTINFHP 231
+ +GH +KP++C CGKS++ + L H I+ P
Sbjct: 449 DL-----DGHLESHEAQKPYRCGACGKSFRLNSHLLSHRRIHLQP 488
>gi|153945755 zinc finger protein 608 [Homo sapiens]
Length = 1512
Score = 41.6 bits (96), Expect = 6e-04
Identities = 26/118 (22%), Positives = 50/118 (42%), Gaps = 12/118 (10%)
Query: 93 SRGNVSTPPRHSSGSLTPPVTPPITPSSSFRSS-TPTGSEYDEEEVDYEESDSDESWTTE 151
+RG + R S + + TPP + ++S + T ++ ++ + + S E
Sbjct: 461 NRGGANGKGRRGSLNASGRRTPPNCAAEDIKASPSSTNKRKNKPPMELDLNSSSEDNKPG 520
Query: 152 SAISSEAILSSMCMNGGEEKPFA-----------CPVPGCKKRYKNVNGIKYHAKNGH 198
+ + + + G E F CP P C K+YK++NG++YH + H
Sbjct: 521 KRVRTNSRSTPTTPQGKPETTFLDQGCSSPVLIDCPHPNCNKKYKHINGLRYHQAHAH 578
>gi|71725360 zinc finger protein 609 [Homo sapiens]
Length = 1411
Score = 41.2 bits (95), Expect = 8e-04
Identities = 29/126 (23%), Positives = 57/126 (45%), Gaps = 14/126 (11%)
Query: 87 TLSSSVSRGNVSTPPRHSSGSLTPPVTPPITPSSSFRSSTPTGSEYDEEEV-DYEESDSD 145
T +SS +R ++ R S + + P + S ++S + ++ + + D E + S
Sbjct: 395 TSNSSKTRAGANSKGRRGSQNSSEHRPPASSTSEDVKASPSSANKRKNKPLSDMELNSSS 454
Query: 146 ESWTTESAISSEAILSSMC-MNGGEEKPFA------------CPVPGCKKRYKNVNGIKY 192
E + + ++ S+ + G + +P CP P C K+YK++NG+KY
Sbjct: 455 EDSKGSKRVRTNSMGSATGPLPGTKVEPTVLDRNCPSPVLIDCPHPNCNKKYKHINGLKY 514
Query: 193 HAKNGH 198
H + H
Sbjct: 515 HQAHAH 520
>gi|21687161 zinc finger protein 625 [Homo sapiens]
Length = 306
Score = 41.2 bits (95), Expect = 8e-04
Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 13/81 (16%)
Query: 151 ESAISSEAILSSMCMNGGE-----EKPFACPVPGCKKRYKNVNGIKYHAKNGHRTQIRVR 205
E + +A SS C++ + EKP+ C C K + + N ++YH + H +
Sbjct: 182 ECSECGKAFHSSTCLHAHKITHTGEKPYECKQ--CGKAFVSFNSVRYHERT-HTGE---- 234
Query: 206 KPFKCR-CGKSYKTAQGLRHH 225
KP++C+ CGK++++A LR H
Sbjct: 235 KPYECKQCGKAFRSASHLRTH 255
Score = 29.6 bits (65), Expect = 2.5
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 12/61 (19%)
Query: 170 EKPFACPVPGCKKRYKNVNGIKYH--AKNGHRTQIRVRKPFKCR-CGKSYKTAQGLRHHT 226
+KP+ C CKK + ++ + H A G KP+ C CGKS+ + +R H
Sbjct: 66 QKPYKCTY--CKKAFSDLPYFRTHEWAHTGG-------KPYDCEECGKSFISRSSIRRHR 116
Query: 227 I 227
I
Sbjct: 117 I 117
>gi|229892345 GLI family zinc finger 1 isoform 2 [Homo sapiens]
Length = 978
Score = 40.8 bits (94), Expect = 0.001
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 7/66 (10%)
Query: 170 EKPFACPVPGCKKRYKNVNGIKYHAKNGHRTQIRVRKPFKCR---CGKSYKTAQGLRHHT 226
EKP+ C GC K + N + H H + KP+ C+ C K Y LR H
Sbjct: 200 EKPYMCEHEGCSKAFSNASDRAKHQNRTHSNE----KPYVCKLPGCTKRYTDPSSLRKHV 255
Query: 227 INFHPP 232
H P
Sbjct: 256 KTVHGP 261
Score = 39.3 bits (90), Expect = 0.003
Identities = 15/37 (40%), Positives = 21/37 (56%)
Query: 170 EKPFACPVPGCKKRYKNVNGIKYHAKNGHRTQIRVRK 206
EKP+ C +PGC KRY + + ++ H K H V K
Sbjct: 231 EKPYVCKLPGCTKRYTDPSSLRKHVKTVHGPDAHVTK 267
Score = 35.8 bits (81), Expect = 0.035
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 8/64 (12%)
Query: 170 EKPFACPVPGCKKRYKNVNGIKYHAKNGHRTQIRVRKPFKCR---CGKSYKTAQGLRHHT 226
EKP C GC+K Y + +K H ++ H + KP+ C C K++ A H
Sbjct: 170 EKPHKCTFEGCRKSYSRLENLKTHLRS-HTGE----KPYMCEHEGCSKAFSNASDRAKHQ 224
Query: 227 INFH 230
H
Sbjct: 225 NRTH 228
Score = 30.0 bits (66), Expect = 1.9
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 8 SFFSNTCRFGGCGLHFPTLADLIEHIEDNHI 38
S + CR+ GC F + L+ HI HI
Sbjct: 103 SVYETDCRWDGCSQEFDSQEQLVHHINSEHI 133
>gi|4885279 GLI family zinc finger 1 isoform 1 [Homo sapiens]
Length = 1106
Score = 40.8 bits (94), Expect = 0.001
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 7/66 (10%)
Query: 170 EKPFACPVPGCKKRYKNVNGIKYHAKNGHRTQIRVRKPFKCR---CGKSYKTAQGLRHHT 226
EKP+ C GC K + N + H H + KP+ C+ C K Y LR H
Sbjct: 328 EKPYMCEHEGCSKAFSNASDRAKHQNRTHSNE----KPYVCKLPGCTKRYTDPSSLRKHV 383
Query: 227 INFHPP 232
H P
Sbjct: 384 KTVHGP 389
Score = 39.3 bits (90), Expect = 0.003
Identities = 15/37 (40%), Positives = 21/37 (56%)
Query: 170 EKPFACPVPGCKKRYKNVNGIKYHAKNGHRTQIRVRK 206
EKP+ C +PGC KRY + + ++ H K H V K
Sbjct: 359 EKPYVCKLPGCTKRYTDPSSLRKHVKTVHGPDAHVTK 395
Score = 35.8 bits (81), Expect = 0.035
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 8/64 (12%)
Query: 170 EKPFACPVPGCKKRYKNVNGIKYHAKNGHRTQIRVRKPFKCR---CGKSYKTAQGLRHHT 226
EKP C GC+K Y + +K H ++ H + KP+ C C K++ A H
Sbjct: 298 EKPHKCTFEGCRKSYSRLENLKTHLRS-HTGE----KPYMCEHEGCSKAFSNASDRAKHQ 352
Query: 227 INFH 230
H
Sbjct: 353 NRTH 356
Score = 30.0 bits (66), Expect = 1.9
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 8 SFFSNTCRFGGCGLHFPTLADLIEHIEDNHI 38
S + CR+ GC F + L+ HI HI
Sbjct: 231 SVYETDCRWDGCSQEFDSQEQLVHHINSEHI 261
>gi|118766337 zinc finger protein of the cerebellum 5 [Homo sapiens]
Length = 663
Score = 40.8 bits (94), Expect = 0.001
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 8/60 (13%)
Query: 170 EKPFACPVPGCKKRYKNVNGIKYHAKNGHRTQIRVRKPFKCR---CGKSYKTAQGLRHHT 226
EKPF CP PGC K + +K H K H + KPFKC C + + + + H+
Sbjct: 488 EKPFPCPFPGCGKVFARSENLKIH-KRTHTGE----KPFKCEFDGCDRKFANSSDRKKHS 542
Score = 28.5 bits (62), Expect = 5.5
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 170 EKPFACPVPGCKKRYKNVNGIKYHAK 195
+KP+ C + GC K Y + + ++ H K
Sbjct: 548 DKPYYCKIRGCDKSYTHPSSLRKHMK 573
>gi|90193619 nuclear matrix transcription factor 4 isoform c [Homo
sapiens]
Length = 461
Score = 40.4 bits (93), Expect = 0.001
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 6/57 (10%)
Query: 170 EKPFACPVPGCKKRYKNVNGIKYHAKNGHRTQIRVRKPFKC-RCGKSYKTAQGLRHH 225
++P+ C PGC+K + ++ ++ HR Q KPFKC C ++Y A L H
Sbjct: 254 DRPYKCAHPGCEKAFTQLSNLQ-----SHRRQHNKDKPFKCHNCHRAYTDAASLEVH 305
>gi|90193617 nuclear matrix transcription factor 4 isoform b [Homo
sapiens]
Length = 500
Score = 40.4 bits (93), Expect = 0.001
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 6/57 (10%)
Query: 170 EKPFACPVPGCKKRYKNVNGIKYHAKNGHRTQIRVRKPFKC-RCGKSYKTAQGLRHH 225
++P+ C PGC+K + ++ ++ HR Q KPFKC C ++Y A L H
Sbjct: 293 DRPYKCAHPGCEKAFTQLSNLQ-----SHRRQHNKDKPFKCHNCHRAYTDAASLEVH 344
>gi|90193615 nuclear matrix transcription factor 4 isoform b [Homo
sapiens]
Length = 500
Score = 40.4 bits (93), Expect = 0.001
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 6/57 (10%)
Query: 170 EKPFACPVPGCKKRYKNVNGIKYHAKNGHRTQIRVRKPFKC-RCGKSYKTAQGLRHH 225
++P+ C PGC+K + ++ ++ HR Q KPFKC C ++Y A L H
Sbjct: 293 DRPYKCAHPGCEKAFTQLSNLQ-----SHRRQHNKDKPFKCHNCHRAYTDAASLEVH 344
>gi|90193613 nuclear matrix transcription factor 4 isoform a [Homo
sapiens]
Length = 516
Score = 40.4 bits (93), Expect = 0.001
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 6/57 (10%)
Query: 170 EKPFACPVPGCKKRYKNVNGIKYHAKNGHRTQIRVRKPFKC-RCGKSYKTAQGLRHH 225
++P+ C PGC+K + ++ ++ HR Q KPFKC C ++Y A L H
Sbjct: 309 DRPYKCAHPGCEKAFTQLSNLQ-----SHRRQHNKDKPFKCHNCHRAYTDAASLEVH 360
>gi|90193611 nuclear matrix transcription factor 4 isoform a [Homo
sapiens]
Length = 516
Score = 40.4 bits (93), Expect = 0.001
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 6/57 (10%)
Query: 170 EKPFACPVPGCKKRYKNVNGIKYHAKNGHRTQIRVRKPFKC-RCGKSYKTAQGLRHH 225
++P+ C PGC+K + ++ ++ HR Q KPFKC C ++Y A L H
Sbjct: 309 DRPYKCAHPGCEKAFTQLSNLQ-----SHRRQHNKDKPFKCHNCHRAYTDAASLEVH 360
>gi|36054194 nuclear matrix transcription factor 4 isoform a [Homo
sapiens]
Length = 516
Score = 40.4 bits (93), Expect = 0.001
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 6/57 (10%)
Query: 170 EKPFACPVPGCKKRYKNVNGIKYHAKNGHRTQIRVRKPFKC-RCGKSYKTAQGLRHH 225
++P+ C PGC+K + ++ ++ HR Q KPFKC C ++Y A L H
Sbjct: 309 DRPYKCAHPGCEKAFTQLSNLQ-----SHRRQHNKDKPFKCHNCHRAYTDAASLEVH 360
>gi|209180475 nuclear matrix transcription factor 4 isoform d [Homo
sapiens]
Length = 577
Score = 40.4 bits (93), Expect = 0.001
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 6/57 (10%)
Query: 170 EKPFACPVPGCKKRYKNVNGIKYHAKNGHRTQIRVRKPFKC-RCGKSYKTAQGLRHH 225
++P+ C PGC+K + ++ ++ HR Q KPFKC C ++Y A L H
Sbjct: 370 DRPYKCAHPGCEKAFTQLSNLQ-----SHRRQHNKDKPFKCHNCHRAYTDAASLEVH 421
Score = 31.2 bits (69), Expect = 0.85
Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Query: 171 KPFACPVPGCKKRYKNVNGIKYHAKNGHRTQIRVRKPFKC-RCGKSYKTAQGLRHH 225
KP++C C+K ++ ++ ++ H + + KP KC C K++ L H
Sbjct: 282 KPYSCNF--CEKSFRQLSHLQQHTRIHSKMHTETIKPHKCPHCSKTFANTSYLAQH 335
>gi|56118214 zinc finger protein 161 [Homo sapiens]
Length = 521
Score = 40.4 bits (93), Expect = 0.001
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
Query: 165 MNGGEEKPFACPVPGCKKRYKNVNGIKYHAKNGHRTQIRVRKPFKCR-CGKSYKTAQGLR 223
++ +EKPF CP+ C +R+K + + YH ++ + + KP+ C CGK + L
Sbjct: 194 LSHSDEKPFECPI--CNQRFKRKDRMTYHVRS---HEGGITKPYTCSVCGKGFSRPDHLS 248
Query: 224 HHTINFH 230
H + H
Sbjct: 249 CHVKHVH 255
>gi|38570115 zinc finger protein 362 [Homo sapiens]
Length = 420
Score = 40.4 bits (93), Expect = 0.001
Identities = 16/57 (28%), Positives = 33/57 (57%), Gaps = 6/57 (10%)
Query: 170 EKPFACPVPGCKKRYKNVNGIKYHAKNGHRTQIRVRKPFKC-RCGKSYKTAQGLRHH 225
++P+ CP PGC+K + ++ ++ H + ++ KP+KC C ++Y + L+ H
Sbjct: 308 DRPYKCPHPGCEKAFTQLSNLQSHQRQHNKD-----KPYKCPNCYRAYSDSASLQIH 359
>gi|22547182 zinc finger protein of the cerebellum 1 [Homo sapiens]
Length = 447
Score = 40.0 bits (92), Expect = 0.002
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 8/59 (13%)
Query: 170 EKPFACPVPGCKKRYKNVNGIKYHAKNGHRTQIRVRKPFKCR---CGKSYKTAQGLRHH 225
EKPF CP PGC K + +K H K H + KPFKC C + + + + H
Sbjct: 299 EKPFPCPFPGCGKVFARSENLKIH-KRTHTGE----KPFKCEFEGCDRRFANSSDRKKH 352
Score = 30.4 bits (67), Expect = 1.5
Identities = 31/109 (28%), Positives = 46/109 (42%), Gaps = 16/109 (14%)
Query: 14 CRFGGCGLHFPTLADLIEHIEDNHIDTDPRVLEKQELQQPTYVALSYINRFMTDAARREQ 73
C F GC F +D +H+ H+ T + ++ +Y S + + M +
Sbjct: 334 CEFEGCDRRFANSSDRKKHM---HVHTSDKPY-LCKMCDKSYTHPSSLRKHM-----KVH 384
Query: 74 ESLKKKIQPKLSLTLSSSVSRG-NVSTPPRHSSGSLTPPVTPPITPSSS 121
ES + QP S + S G STPP S S P T ++PSSS
Sbjct: 385 ESSSQGSQP------SPAASSGYESSTPPTIVSPSTDNPTTSSLSPSSS 427
>gi|48717244 zinc finger protein 782 [Homo sapiens]
Length = 699
Score = 40.0 bits (92), Expect = 0.002
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 8/57 (14%)
Query: 170 EKPFACPVPGCKKRYKNVNGIKYHAKNGHRTQIRVRKPFKC-RCGKSYKTAQGLRHH 225
EKPF C C K + +++G++ HR +P+KC CGK++K GLR H
Sbjct: 475 EKPFECNE--CGKSFSHMSGLR-----NHRRTHTGERPYKCDECGKAFKLKSGLRKH 524
>gi|4507973 zinc finger protein of the cerebellum 3 [Homo sapiens]
Length = 467
Score = 40.0 bits (92), Expect = 0.002
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 8/59 (13%)
Query: 170 EKPFACPVPGCKKRYKNVNGIKYHAKNGHRTQIRVRKPFKCR---CGKSYKTAQGLRHH 225
EKPF CP PGC K + +K H K H + KPFKC C + + + + H
Sbjct: 325 EKPFPCPFPGCGKIFARSENLKIH-KRTHTGE----KPFKCEFEGCDRRFANSSDRKKH 378
>gi|157276588 basonuclin 1 [Homo sapiens]
Length = 994
Score = 40.0 bits (92), Expect = 0.002
Identities = 48/239 (20%), Positives = 92/239 (38%), Gaps = 29/239 (12%)
Query: 12 NTCRFGGCGLHFPTLADLIEHIEDNHIDTDPRVLEKQELQ------QPTYVALSYINRFM 65
+TC GC FP+ H ++++ + L ++ L+ + Y+
Sbjct: 748 HTCTVEGCNATFPSRRSRDRH--SSNLNLHQKALSQEALESSEDHFRAAYLLKDVAKEAY 805
Query: 66 TDAARREQESLKKKIQPKLSL--TLSSSVSRGNVSTPPRHSSGSLTPPVTPPITPSSSFR 123
D A +Q S I S +L +++ + ++ ++SG L+ ++ +SS +
Sbjct: 806 QDVAFTQQASQTSVIFKGTSRMGSLVYPITQVHSASLESYNSGPLSEGTILDLSTTSSMK 865
Query: 124 SSTPTGSEYDEEEVDYEES----DSDESWTTESAISSE-----AILSSMCMNGGEEKPFA 174
S + + S +D + V E + DSD + S + E +L P
Sbjct: 866 SESSSHSSWDSDGVSEEGTVLMEDSDGNCEGSSLVPGEDEYPICVLMEKADQSLASLPSG 925
Query: 175 CPVPG--CKKRYKNVNGIKYHAKNGHRTQIRVRKPFKCR---CGKSYKTAQGLRHHTIN 228
P+ C+K Y N + H K H Q+ KC+ C + + + H+ N
Sbjct: 926 LPITCHLCQKTYSNKGTFRAHYKTVHLRQLH-----KCKVPGCNTMFSSVRSRNRHSQN 979
Score = 32.3 bits (72), Expect = 0.38
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 10/65 (15%)
Query: 169 EEKPFACPVPGCKKRYKNVNGIKYHAKNGHRTQIRVRKPFKCR---CGKSYKTAQGLRHH 225
EE F C + CKK +KN +K H KN H V++ C C ++ + + H
Sbjct: 716 EENRFQCDI--CKKTFKNACSVKIHHKNMH-----VKEMHTCTVEGCNATFPSRRSRDRH 768
Query: 226 TINFH 230
+ N +
Sbjct: 769 SSNLN 773
>gi|86991432 GLI-Kruppel family member GLI2 [Homo sapiens]
Length = 1586
Score = 39.7 bits (91), Expect = 0.002
Identities = 15/37 (40%), Positives = 21/37 (56%)
Query: 170 EKPFACPVPGCKKRYKNVNGIKYHAKNGHRTQIRVRK 206
EKP+ C +PGC KRY + + ++ H K H V K
Sbjct: 561 EKPYICKIPGCTKRYTDPSSLRKHVKTVHGPDAHVTK 597
Score = 35.0 bits (79), Expect = 0.059
Identities = 27/103 (26%), Positives = 36/103 (34%), Gaps = 32/103 (31%)
Query: 170 EKPFACPVPGCKKRYKNVNGIKYH---------------------------AKNGHRTQI 202
EKP C GC K Y + +K H AK+ +RT
Sbjct: 500 EKPHKCTFEGCSKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHS 559
Query: 203 RVRKPFKCR---CGKSYKTAQGLRHHTINFHPPVSAEIIRKMQ 242
KP+ C+ C K Y LR H H P A + +K +
Sbjct: 560 N-EKPYICKIPGCTKRYTDPSSLRKHVKTVHGP-DAHVTKKQR 600
>gi|166706915 GLIS family zinc finger 1 [Homo sapiens]
Length = 620
Score = 39.7 bits (91), Expect = 0.002
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 169 EEKPFACPVPGCKKRYKNVNGIKYHAKNGHRTQIRVRK 206
+ KP+AC +PGC KRY + + ++ H K + +VRK
Sbjct: 318 DTKPYACQIPGCSKRYTDPSSLRKHVKAHSAKEQQVRK 355
Score = 38.9 bits (89), Expect = 0.004
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 9/75 (12%)
Query: 170 EKPFACPVPGCKKRYKNVNGIKYHAKNGHRTQIRVRKPFKCR---CGKSYKTAQGLRHHT 226
EKP+ C PGC+K + N + H + T KP+ C+ C K Y LR H
Sbjct: 289 EKPYLCQHPGCQKAFSNSSDRAKHQRTHLDT-----KPYACQIPGCSKRYTDPSSLRKH- 342
Query: 227 INFHPPVSAEIIRKM 241
+ H ++ +K+
Sbjct: 343 VKAHSAKEQQVRKKL 357
Score = 30.4 bits (67), Expect = 1.5
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 9/70 (12%)
Query: 159 ILSSMCMNGGEEKPFACPVPGCKKRYKNVNGIKYHAKNGHRTQIRVRKPFKCR---CGKS 215
+L M ++ GE KP C GC K + + +K H ++ H + KP+ C+ C K+
Sbjct: 249 LLIHMRVHSGE-KPNKCMFEGCSKAFSRLENLKIHLRS-HTGE----KPYLCQHPGCQKA 302
Query: 216 YKTAQGLRHH 225
+ + H
Sbjct: 303 FSNSSDRAKH 312
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.129 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,745,139
Number of Sequences: 37866
Number of extensions: 535336
Number of successful extensions: 4810
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 151
Number of HSP's successfully gapped in prelim test: 403
Number of HSP's that attempted gapping in prelim test: 3855
Number of HSP's gapped (non-prelim): 1378
length of query: 243
length of database: 18,247,518
effective HSP length: 99
effective length of query: 144
effective length of database: 14,498,784
effective search space: 2087824896
effective search space used: 2087824896
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.