Guide to the Human Genome
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Name: C7orf44 Sequence: fasta or formatted (146aa) NCBI GI: 90855771
Description:

hypothetical protein LOC55744

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2          9           1
 C cysteine            0.0          0           0
 D aspartate           4.1          6           1
 E glutamate           6.8         10           1
 F phenylalanine       5.5          8           1
 G glycine             8.9         13           2
 H histidine           4.1          6           1
 I isoleucine          5.5          8           1
 K lysine              7.5         11           2
 L leucine            11.6         17           2
 M methionine          2.1          3           2
 N asparagine          2.1          3           1
 P proline             4.8          7           2
 Q glutamine           5.5          8           2
 R arginine            4.8          7           2
 S serine              6.8         10           2
 T threonine           0.0          0           0
 V valine              6.8         10           1
 W tryptophan          1.4          2           1
 Y tyrosine            5.5          8           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC55744 
RNFT1                 0.011   PTD016 protein 
CACNA1G               0.007   voltage-dependent calcium channel alpha 1G subunit i...
LOC727838             0.007   PREDICTED: similar to cancer/testis antigen family ...
LOC727838             0.007   PREDICTED: similar to cancer/testis antigen family ...
WWP1                  0.007   WW domain containing E3 ubiquitin protein ligase 1 [...
CACNA1G               0.007   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.007   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.007   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.007   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.007   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.007   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.007   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.007   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.007   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.007   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.007   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.007   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.007   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.007   voltage-dependent calcium channel alpha 1G subunit i...
C14orf109             0.007   hypothetical protein LOC26175 isoform 1 
C14orf109             0.007   hypothetical protein LOC26175 isoform 2 
LOC100287062          0.007   PREDICTED: hypothetical protein XP_002343629 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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