Guide to the Human Genome
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Name: CHCHD6 Sequence: fasta or formatted (235aa) NCBI GI: 14150134
Description:

coiled-coil-helix-coiled-coil-helix domain containing 6

Referenced in:

Coiled-Coil Proteins
Mitochondria

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         17           2
 C cysteine            1.7          4           1
 D aspartate           2.6          6           1
 E glutamate          12.3         29           3
 F phenylalanine       2.1          5           1
 G glycine             6.4         15           2
 H histidine           3.4          8           1
 I isoleucine          2.1          5           1
 K lysine              6.8         16           1
 L leucine             7.2         17           2
 M methionine          2.1          5           1
 N asparagine          1.7          4           1
 P proline             5.1         12           3
 Q glutamine           5.5         13           2
 R arginine           10.2         24           3
 S serine             11.5         27           2
 T threonine           3.4          8           1
 V valine              6.4         15           2
 W tryptophan          0.0          0           0
 Y tyrosine            2.1          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   coiled-coil-helix-coiled-coil-helix domain containin... 
CHCHD3                0.268   coiled-coil-helix-coiled-coil-helix domain containing...
NUMA1                 0.034   nuclear mitotic apparatus protein 1 
MYH7                  0.034   myosin, heavy chain 7, cardiac muscle, beta 
MYH4                  0.034   myosin, heavy polypeptide 4, skeletal muscle 
ANKRD17               0.032   ankyrin repeat domain protein 17 isoform a 
ANKRD17               0.032   ankyrin repeat domain protein 17 isoform b 
MYH14                 0.032   myosin, heavy chain 14 isoform 1 
MYH14                 0.032   myosin, heavy chain 14 isoform 2 
MYH14                 0.032   myosin, heavy chain 14 isoform 3 
MYH13                 0.032   myosin, heavy polypeptide 13, skeletal muscle [Homo...
MYH8                  0.032   myosin, heavy chain 8, skeletal muscle, perinatal [...
CGNL1                 0.029   cingulin-like 1 
LOC283767             0.029   golgi autoantigen, golgin subfamily a-like 
MYH1                  0.027   myosin, heavy chain 1, skeletal muscle, adult [Homo...
CDC2L1                0.027   cell division cycle 2-like 1 (PITSLRE proteins) isof...
GEFT                  0.027   RhoA/RAC/CDC42 exchange factor isoform 3 
CDK5RAP2              0.027   CDK5 regulatory subunit associated protein 2 isoform...
CDK5RAP2              0.027   CDK5 regulatory subunit associated protein 2 isoform...
MYH2                  0.027   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH2                  0.027   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH6                  0.027   myosin heavy chain 6 
GOLGA6D               0.025   golgi autoantigen, golgin subfamily a, 6D 
GOLGA6C               0.025   PREDICTED: golgi autoantigen, golgin subfamily a, 6C...
LOC645202             0.025   PREDICTED: hypothetical protein LOC645202 
CROCC                 0.025   ciliary rootlet coiled-coil 
CDC2L1                0.025   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.025   cell division cycle 2-like 1 (PITSLRE proteins) isof...
GOLGA6                0.025   golgi autoantigen, golgin subfamily a, 6 
LOC283685             0.025   PREDICTED: golgi autoantigen, golgin subfamily a-li...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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