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Search of human proteins with 8923226
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|8923226 protein phosphatase 1, regulatory subunit 14D
isoform 1 [Homo sapiens]
(145 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|8923226 protein phosphatase 1, regulatory subunit 14D isoform... 294 2e-80
gi|194306647 protein phosphatase 1, regulatory subunit 14D isofo... 180 4e-46
gi|15147250 protein phosphatase 1, regulatory (inhibitor) subuni... 84 5e-17
gi|19311006 protein phosphatase 1, regulatory (inhibitor) subuni... 77 4e-15
gi|239755567 PREDICTED: similar to protein phosphatase 1 regulat... 76 1e-14
gi|20162550 protein phosphatase 1 regulatory subunit 14B [Homo s... 76 1e-14
gi|73390140 LIM domain kinase 2 isoform 1 [Homo sapiens] 74 6e-14
gi|34365793 WNK lysine deficient protein kinase 4 [Homo sapiens] 35 0.029
gi|21735548 centrosomal protein 2 [Homo sapiens] 32 0.25
gi|148746195 trichohyalin [Homo sapiens] 31 0.32
gi|4502775 centromere protein A isoform a [Homo sapiens] 30 0.55
gi|67906195 ankyrin repeat and sterile alpha motif domain contai... 30 0.71
gi|95147342 chromodomain helicase DNA binding protein 9 [Homo sa... 30 0.71
gi|239756511 PREDICTED: hypothetical protein [Homo sapiens] 29 1.2
gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo s... 29 1.2
gi|149999378 inverted formin 2 isoform 2 [Homo sapiens] 29 1.2
gi|149999380 inverted formin 2 isoform 1 [Homo sapiens] 29 1.2
gi|89257348 homeo box HB9 [Homo sapiens] 29 1.2
gi|7657387 CCR4-NOT transcription complex, subunit 3 [Homo sapiens] 29 1.2
gi|239757916 PREDICTED: SAGE1-like protein-like [Homo sapiens] 29 1.6
gi|239752427 PREDICTED: SAGE1-like protein-like [Homo sapiens] 29 1.6
gi|239746945 PREDICTED: SAGE1-like protein-like [Homo sapiens] 29 1.6
gi|130977756 transmembrane anterior posterior transformation 1 [... 29 1.6
gi|48255931 hepatoma-derived growth factor-related protein 2 iso... 29 1.6
gi|14249158 hepatoma-derived growth factor-related protein 2 iso... 29 1.6
gi|52630419 sterol regulatory element binding transcription fact... 28 2.1
gi|22547195 sterol regulatory element binding transcription fact... 28 2.1
gi|109255234 centrosomal protein 290kDa [Homo sapiens] 28 2.1
gi|21040326 SON DNA-binding protein isoform F [Homo sapiens] 28 2.1
gi|21040314 SON DNA-binding protein isoform B [Homo sapiens] 28 2.1
>gi|8923226 protein phosphatase 1, regulatory subunit 14D isoform 1
[Homo sapiens]
Length = 145
Score = 294 bits (752), Expect = 2e-80
Identities = 145/145 (100%), Positives = 145/145 (100%)
Query: 1 MLSSSPASCTSPSPDGENPCKKVHWASGRRRTSSTDSESKSHPDSSKIPRSRRPSRLTVK 60
MLSSSPASCTSPSPDGENPCKKVHWASGRRRTSSTDSESKSHPDSSKIPRSRRPSRLTVK
Sbjct: 1 MLSSSPASCTSPSPDGENPCKKVHWASGRRRTSSTDSESKSHPDSSKIPRSRRPSRLTVK 60
Query: 61 YDRGQLQRWLEMEQWVDAQVQELFQDQATPSEPEIDLEALMDLSTEEQKTQLEAILGNCP 120
YDRGQLQRWLEMEQWVDAQVQELFQDQATPSEPEIDLEALMDLSTEEQKTQLEAILGNCP
Sbjct: 61 YDRGQLQRWLEMEQWVDAQVQELFQDQATPSEPEIDLEALMDLSTEEQKTQLEAILGNCP 120
Query: 121 RPTEAFISELLSQLKKLRRLSRPQK 145
RPTEAFISELLSQLKKLRRLSRPQK
Sbjct: 121 RPTEAFISELLSQLKKLRRLSRPQK 145
>gi|194306647 protein phosphatase 1, regulatory subunit 14D
isoform 2 [Homo sapiens]
Length = 200
Score = 180 bits (456), Expect = 4e-46
Identities = 86/88 (97%), Positives = 86/88 (97%)
Query: 1 MLSSSPASCTSPSPDGENPCKKVHWASGRRRTSSTDSESKSHPDSSKIPRSRRPSRLTVK 60
MLSSSPASCTSPSPDGENPCKKVHWASGRRRTSSTDSESKSHPDSSKIPRSRRPSRLTVK
Sbjct: 1 MLSSSPASCTSPSPDGENPCKKVHWASGRRRTSSTDSESKSHPDSSKIPRSRRPSRLTVK 60
Query: 61 YDRGQLQRWLEMEQWVDAQVQELFQDQA 88
YDRGQLQRWLEMEQWVDAQVQELFQ A
Sbjct: 61 YDRGQLQRWLEMEQWVDAQVQELFQSLA 88
>gi|15147250 protein phosphatase 1, regulatory (inhibitor) subunit
14A [Homo sapiens]
Length = 147
Score = 83.6 bits (205), Expect = 5e-17
Identities = 42/114 (36%), Positives = 76/114 (66%), Gaps = 2/114 (1%)
Query: 28 GRRRTSSTDSESKSH-PDSSKIPRSRRPSRLTVKYDRGQLQRWLEMEQWVDAQVQELFQD 86
G+R S S S++ P S +R +R+TVKYDR +LQR L++E+W+D +++EL++
Sbjct: 7 GKRVLSKLQSPSRARGPGGSPGGLQKRHARVTVKYDRRELQRRLDVEKWIDGRLEELYRG 66
Query: 87 QATPSEPEIDLEALMDLSTEEQKT-QLEAILGNCPRPTEAFISELLSQLKKLRR 139
EI+++ L++L +EE+++ +++ +L +C +P E FI ELL++L+ L R
Sbjct: 67 MEADMPDEINIDELLELESEEERSRKIQGLLKSCGKPVEDFIQELLAKLQGLHR 120
>gi|19311006 protein phosphatase 1, regulatory (inhibitor) subunit
14C [Homo sapiens]
Length = 165
Score = 77.4 bits (189), Expect = 4e-15
Identities = 41/99 (41%), Positives = 70/99 (70%), Gaps = 4/99 (4%)
Query: 50 RSRRPSRLTVKYDRGQLQRWLEMEQWVDAQVQELF--QDQATPSEPEIDLEALMDL-STE 106
R + ++TVKYDR +L++ L +E+W+ Q+ +L+ +++ P E EID++ L+D S E
Sbjct: 65 RRHQQGKVTVKYDRKELRKRLVLEEWIVEQLGQLYGCEEEEMP-EVEIDIDDLLDADSDE 123
Query: 107 EQKTQLEAILGNCPRPTEAFISELLSQLKKLRRLSRPQK 145
E+ ++L+ L +C +PTE FI ELLS+++ +R+LS PQK
Sbjct: 124 ERASKLQEALVDCYKPTEEFIKELLSRIRGMRKLSPPQK 162
>gi|239755567 PREDICTED: similar to protein phosphatase 1 regulatory
subunit 14B [Homo sapiens]
Length = 147
Score = 75.9 bits (185), Expect = 1e-14
Identities = 38/97 (39%), Positives = 70/97 (72%), Gaps = 4/97 (4%)
Query: 52 RRPSRLTVKYDRGQLQRWLEMEQWVDAQVQELF--QDQATPSEPEIDLEALMDLSTEEQK 109
RR ++TVKYDR +L++ L +E+W+ Q+ L+ Q++ P E EID++ L+D+ +++ +
Sbjct: 51 RRQGKVTVKYDRKELRKRLNLEEWILEQLTRLYDCQEEEIP-ELEIDVDELLDMESDDAR 109
Query: 110 T-QLEAILGNCPRPTEAFISELLSQLKKLRRLSRPQK 145
+++ +L +C +PTEAFIS LL +++ +++LS PQK
Sbjct: 110 AARVKELLVDCYKPTEAFISGLLDKIRGMQKLSTPQK 146
>gi|20162550 protein phosphatase 1 regulatory subunit 14B [Homo
sapiens]
Length = 147
Score = 75.9 bits (185), Expect = 1e-14
Identities = 38/97 (39%), Positives = 70/97 (72%), Gaps = 4/97 (4%)
Query: 52 RRPSRLTVKYDRGQLQRWLEMEQWVDAQVQELF--QDQATPSEPEIDLEALMDLSTEEQK 109
RR ++TVKYDR +L++ L +E+W+ Q+ L+ Q++ P E EID++ L+D+ +++ +
Sbjct: 51 RRQGKVTVKYDRKELRKRLNLEEWILEQLTRLYDCQEEEIP-ELEIDVDELLDMESDDAR 109
Query: 110 T-QLEAILGNCPRPTEAFISELLSQLKKLRRLSRPQK 145
+++ +L +C +PTEAFIS LL +++ +++LS PQK
Sbjct: 110 AARVKELLVDCYKPTEAFISGLLDKIRGMQKLSTPQK 146
>gi|73390140 LIM domain kinase 2 isoform 1 [Homo sapiens]
Length = 686
Score = 73.6 bits (179), Expect = 6e-14
Identities = 36/96 (37%), Positives = 67/96 (69%), Gaps = 2/96 (2%)
Query: 52 RRPSRLTVKYDRGQLQRWLEMEQWVDAQVQELFQDQATP-SEPEIDLEALMDLSTEEQ-K 109
RR ++T+KYD +L++ L +E+W+ Q+ L+ Q SE EID++ L+D+ +++
Sbjct: 590 RRQGKVTIKYDPKELRKHLNLEEWILEQLTRLYDCQEEEISELEIDVDELLDMESDDAWA 649
Query: 110 TQLEAILGNCPRPTEAFISELLSQLKKLRRLSRPQK 145
++++ +L +C +PTEAFIS LL +++ +++LS PQK
Sbjct: 650 SRVKELLVDCYKPTEAFISGLLDKIRAMQKLSTPQK 685
>gi|34365793 WNK lysine deficient protein kinase 4 [Homo sapiens]
Length = 1243
Score = 34.7 bits (78), Expect = 0.029
Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Query: 3 SSSPASCTSPSPDGENPCKKVHWASGRRRTSSTDSESKSHPDSSKIPRSRRPSRLTVKYD 62
S+ P SP P + P + W G ++ DS PDS+ P SR P R+ +
Sbjct: 89 SAGPGPARSPPPSSKEPPEGT-WTEGAPVKAAEDSARPELPDSAVGPGSREPLRVP---E 144
Query: 63 RGQLQRWLEMEQWVDAQVQ 81
L+R E E+ D + Q
Sbjct: 145 AVALERRREQEEKEDMETQ 163
>gi|21735548 centrosomal protein 2 [Homo sapiens]
Length = 2442
Score = 31.6 bits (70), Expect = 0.25
Identities = 22/110 (20%), Positives = 52/110 (47%), Gaps = 1/110 (0%)
Query: 30 RRTSSTDSESKSHPDSSKIPRSRRPSRLTVKYDRGQLQRWLEMEQWVDAQVQELFQDQAT 89
R+ + + E K+ + K + ++L K+++ + E+ + +++ +E + +
Sbjct: 831 RQLAQAEQEGKTALEQQKAAHEKEVNQLREKWEKERSWHQQELAKALESLEREKMELEMR 890
Query: 90 PSEPEIDLEALMDLSTEEQKTQLEAILGNCPRPTEAFISELLSQLKKLRR 139
E + ++EA+ EE++TQ E+ L TE LL L + ++
Sbjct: 891 LKEQQTEMEAI-QAQREEERTQAESALCQMQLETEKERVSLLETLLQTQK 939
>gi|148746195 trichohyalin [Homo sapiens]
Length = 1943
Score = 31.2 bits (69), Expect = 0.32
Identities = 27/113 (23%), Positives = 46/113 (40%), Gaps = 2/113 (1%)
Query: 30 RRTSSTDSESKSHPDSSKIPRSRRPSRLTVKYDRGQLQRWLEMEQWVDAQVQELFQDQAT 89
RR E + K + RR RL K ++ + + WL+ E+ + QE + Q
Sbjct: 420 RREQQLRREQEEERHEQKHEQERREQRL--KREQEERRDWLKREEETERHEQERRKQQLK 477
Query: 90 PSEPEIDLEALMDLSTEEQKTQLEAILGNCPRPTEAFISELLSQLKKLRRLSR 142
+ E E + L EE++ Q E R E + L + ++ RL +
Sbjct: 478 RDQEEERRERWLKLEEEERREQQERREQQLRREQEERREQRLKRQEEEERLQQ 530
>gi|4502775 centromere protein A isoform a [Homo sapiens]
Length = 140
Score = 30.4 bits (67), Expect = 0.55
Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 8/92 (8%)
Query: 3 SSSPASCTSPSPDGENPCKKVHWASGRRR---TSSTDSESKSHPDSSKIPRSRRPSRLTV 59
S SP PS G + H S RR+ + +H K+P SR + V
Sbjct: 17 SPSPTPTPGPSRRGPSLGASSHQHSRRRQGWLKEIRKLQKSTHLLIRKLPFSRLAREICV 76
Query: 60 KYDRG-----QLQRWLEMEQWVDAQVQELFQD 86
K+ RG Q Q L +++ +A + LF+D
Sbjct: 77 KFTRGVDFNWQAQALLALQEAAEAFLVHLFED 108
>gi|67906195 ankyrin repeat and sterile alpha motif domain
containing 6 [Homo sapiens]
Length = 871
Score = 30.0 bits (66), Expect = 0.71
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 25/107 (23%)
Query: 3 SSSPASCTSPSPDGENPCKKVHWASGRRRTSSTDSESKSHPDSSKIPRSRRPSRLTVKYD 62
S+SP SPSP G H A +SS+ +SKS SS +T + +
Sbjct: 732 STSPTLTPSPSPKG-------HTAESSVSSSSSHRQSKSSGGSSS-------GTITDEDE 777
Query: 63 RGQLQRWLEMEQWVDAQVQELFQDQATPSEPEIDLEALMDLSTEEQK 109
+ + L +E++ Q +F++Q E+D+EA + L+ + K
Sbjct: 778 LTGILKKLSLEKY-----QPIFEEQ------EVDMEAFLTLTDGDLK 813
>gi|95147342 chromodomain helicase DNA binding protein 9 [Homo
sapiens]
Length = 2881
Score = 30.0 bits (66), Expect = 0.71
Identities = 30/124 (24%), Positives = 49/124 (39%), Gaps = 15/124 (12%)
Query: 4 SSPASCTSPSPDGENPCKKVHWASGRRRTSSTDSESKSHPDSSKIPRSRRPSRLTVKYDR 63
S +SC+S S + H SG +SS+ S S SS S S + +
Sbjct: 2138 SERSSCSSRSSSSSSSSSCSHSRSGSSSSSSSSCSSASSSSSSSTSSSSSSSSSSSEES- 2196
Query: 64 GQLQRWLEMEQWVDAQVQELFQDQATPSEPEIDLEALMDLSTEEQKTQLEAILGNCPRPT 123
D+ +E + ++T D E++ LST + +TQ ++ N P
Sbjct: 2197 -------------DSDEEEAQKRESTTHMKAYDEESVASLSTTQDETQ-DSFQMNNGTPE 2242
Query: 124 EAFI 127
A+I
Sbjct: 2243 SAYI 2246
>gi|239756511 PREDICTED: hypothetical protein [Homo sapiens]
Length = 139
Score = 29.3 bits (64), Expect = 1.2
Identities = 19/61 (31%), Positives = 24/61 (39%), Gaps = 15/61 (24%)
Query: 11 SPSPDGENPCKKV---------------HWASGRRRTSSTDSESKSHPDSSKIPRSRRPS 55
+PSP G C KV WASG RR+ S H +++ R RP
Sbjct: 60 TPSPHGAPDCLKVALARATSGTEAVAGRSWASGLRRSGRVSSAQWRHRCFTRVCREMRPL 119
Query: 56 R 56
R
Sbjct: 120 R 120
>gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo
sapiens]
Length = 4911
Score = 29.3 bits (64), Expect = 1.2
Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 7/92 (7%)
Query: 31 RTSSTDSESKSHPDSSKIPRS----RRPSRLTVKYDRGQLQRWLEME---QWVDAQVQEL 83
+TS + + S S P IP++ R L ++ LQ L+ E Q Q+Q +
Sbjct: 3016 QTSQSGTSSMSGPQQLMIPQTLAQQNRERPLLLEEQPLLLQDLLDQERQEQQQQRQMQAM 3075
Query: 84 FQDQATPSEPEIDLEALMDLSTEEQKTQLEAI 115
+ ++ P P ID +A+ D + + L+ I
Sbjct: 3076 IRQRSEPFFPNIDFDAITDPIMKAKMVALKGI 3107
>gi|149999378 inverted formin 2 isoform 2 [Homo sapiens]
Length = 1240
Score = 29.3 bits (64), Expect = 1.2
Identities = 29/114 (25%), Positives = 51/114 (44%), Gaps = 9/114 (7%)
Query: 36 DSESKSHPDSSKIPRS-RRPSR---LTVKYDRGQ----LQRWLEMEQWVDAQVQELFQDQ 87
+ KSHPD ++PR +PS+ + ++ R + L++ LE E+ V A V E+ +
Sbjct: 806 EEAEKSHPDLLQLPRDLEQPSQAAGINLEIIRSEASSNLKKLLETERKVSASVAEVQEQY 865
Query: 88 ATPSEPEID-LEALMDLSTEEQKTQLEAILGNCPRPTEAFISELLSQLKKLRRL 140
+ I AL +L ++ Q E C + + + S +K R L
Sbjct: 866 TERLQASISAFRALDELFEAIEQKQRELADYLCEDAQQLSLEDTFSTMKAFRDL 919
>gi|149999380 inverted formin 2 isoform 1 [Homo sapiens]
Length = 1249
Score = 29.3 bits (64), Expect = 1.2
Identities = 29/114 (25%), Positives = 51/114 (44%), Gaps = 9/114 (7%)
Query: 36 DSESKSHPDSSKIPRS-RRPSR---LTVKYDRGQ----LQRWLEMEQWVDAQVQELFQDQ 87
+ KSHPD ++PR +PS+ + ++ R + L++ LE E+ V A V E+ +
Sbjct: 806 EEAEKSHPDLLQLPRDLEQPSQAAGINLEIIRSEASSNLKKLLETERKVSASVAEVQEQY 865
Query: 88 ATPSEPEID-LEALMDLSTEEQKTQLEAILGNCPRPTEAFISELLSQLKKLRRL 140
+ I AL +L ++ Q E C + + + S +K R L
Sbjct: 866 TERLQASISAFRALDELFEAIEQKQRELADYLCEDAQQLSLEDTFSTMKAFRDL 919
>gi|89257348 homeo box HB9 [Homo sapiens]
Length = 401
Score = 29.3 bits (64), Expect = 1.2
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 20/79 (25%)
Query: 71 EMEQWVDAQVQELFQDQATPSEPEIDLEALMDLSTEEQKTQLEAILGNCPRPTEAFIS-- 128
+++QW+ A + P P+ + +A +L LG C RP AF S
Sbjct: 209 QLDQWLRASTAGMI----LPKMPDFNSQAQSNL------------LGKCRRPRTAFTSQQ 252
Query: 129 --ELLSQLKKLRRLSRPQK 145
EL Q K + LSRP++
Sbjct: 253 LLELEHQFKLNKYLSRPKR 271
>gi|7657387 CCR4-NOT transcription complex, subunit 3 [Homo sapiens]
Length = 753
Score = 29.3 bits (64), Expect = 1.2
Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 16/63 (25%)
Query: 3 SSSPASCTSPSPDGENP--CKKVHWASGRRRTSSTDSE--------------SKSHPDSS 46
SS+P S TS SP +P C + ++R STDSE S HP S
Sbjct: 258 SSTPTSTTSSSPIPPSPANCTTENSEDDKKRGRSTDSEVSQSPAKNGSKPVHSNQHPQSP 317
Query: 47 KIP 49
+P
Sbjct: 318 AVP 320
>gi|239757916 PREDICTED: SAGE1-like protein-like [Homo sapiens]
Length = 944
Score = 28.9 bits (63), Expect = 1.6
Identities = 23/95 (24%), Positives = 40/95 (42%), Gaps = 8/95 (8%)
Query: 2 LSSSPASCTSPSPDGENPCKKVHWASGRRRTSSTDSESKSHPDSSKIPRSRRPSRLTVKY 61
+ +SP + P+P E + + ++T S + + SK RSR R +
Sbjct: 42 IQASPLQTSQPTPPEELHTVGYVFTNDGQQTRSDEVNQVATGHQSKQKRSRESKRHSSSK 101
Query: 62 DRGQLQRWLEMEQWVDAQV------QELFQDQATP 90
R + RWL ++ DA V +++ DQ P
Sbjct: 102 RRKSMSRWLNKQE--DAAVTHIVCEEKINNDQPAP 134
>gi|239752427 PREDICTED: SAGE1-like protein-like [Homo sapiens]
Length = 944
Score = 28.9 bits (63), Expect = 1.6
Identities = 23/95 (24%), Positives = 40/95 (42%), Gaps = 8/95 (8%)
Query: 2 LSSSPASCTSPSPDGENPCKKVHWASGRRRTSSTDSESKSHPDSSKIPRSRRPSRLTVKY 61
+ +SP + P+P E + + ++T S + + SK RSR R +
Sbjct: 42 IQASPLQTSQPTPPEELHTVGYVFTNDGQQTRSDEVNQVATGHQSKQKRSRESKRHSSSK 101
Query: 62 DRGQLQRWLEMEQWVDAQV------QELFQDQATP 90
R + RWL ++ DA V +++ DQ P
Sbjct: 102 RRKSMSRWLNKQE--DAAVTHIVCEEKINNDQPAP 134
>gi|239746945 PREDICTED: SAGE1-like protein-like [Homo sapiens]
Length = 990
Score = 28.9 bits (63), Expect = 1.6
Identities = 23/95 (24%), Positives = 40/95 (42%), Gaps = 8/95 (8%)
Query: 2 LSSSPASCTSPSPDGENPCKKVHWASGRRRTSSTDSESKSHPDSSKIPRSRRPSRLTVKY 61
+ +SP + P+P E + + ++T S + + SK RSR R +
Sbjct: 42 IQASPLQTSQPTPPEELHTVGYVFTNDGQQTRSDEVNQVATGHQSKQKRSRESKRHSSSK 101
Query: 62 DRGQLQRWLEMEQWVDAQV------QELFQDQATP 90
R + RWL ++ DA V +++ DQ P
Sbjct: 102 RRKSMSRWLNKQE--DAAVTHIVCEEKINNDQPAP 134
>gi|130977756 transmembrane anterior posterior transformation 1
[Homo sapiens]
Length = 567
Score = 28.9 bits (63), Expect = 1.6
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Query: 2 LSSSPASCT--SPSPDGENPCKKVHWASGRRRTSSTDSESKSHPDSSKIP 49
LS+ PA+CT PS +N CK S S++ ++ H + IP
Sbjct: 467 LSNPPATCTPGKPSSKSQNKCKPSQGLSTEENLSASITKQPIHQKENIIP 516
>gi|48255931 hepatoma-derived growth factor-related protein 2
isoform 1 [Homo sapiens]
Length = 671
Score = 28.9 bits (63), Expect = 1.6
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 5 SPASCTSPSPDGENPCKKVHWASGRRRTSSTDSESKSHPDSS--KIPRSRRPSRLTVKYD 62
+P++ S S + K A R +SS+ S S S D S K PR R+P+ +
Sbjct: 228 APSASDSDSKADSDGAKPEPVAMARSASSSSSSSSSSDSDVSVKKPPRGRKPAEKPLPKP 287
Query: 63 RGQ 65
RG+
Sbjct: 288 RGR 290
>gi|14249158 hepatoma-derived growth factor-related protein 2
isoform 2 [Homo sapiens]
Length = 670
Score = 28.9 bits (63), Expect = 1.6
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 5 SPASCTSPSPDGENPCKKVHWASGRRRTSSTDSESKSHPDSS--KIPRSRRPSRLTVKYD 62
+P++ S S + K A R +SS+ S S S D S K PR R+P+ +
Sbjct: 228 APSASDSDSKADSDGAKPEPVAMARSASSSSSSSSSSDSDVSVKKPPRGRKPAEKPLPKP 287
Query: 63 RGQ 65
RG+
Sbjct: 288 RGR 290
>gi|52630419 sterol regulatory element binding transcription factor
1 isoform a [Homo sapiens]
Length = 1177
Score = 28.5 bits (62), Expect = 2.1
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Query: 10 TSPSPDGENPCKKVHWASGRRRTSSTDSESKSHPDSSKIPRSR-RPSRLTVKYDRGQLQR 68
T P D +P + + G R + S S S S PDS S+ +P + + RG L R
Sbjct: 456 TPPPSDAGSPFQSSPLSLGSRGSGSGGSGSDSEPDSPVFEDSKAKPEQRPSLHSRGMLDR 515
>gi|22547195 sterol regulatory element binding transcription factor
1 isoform b [Homo sapiens]
Length = 1147
Score = 28.5 bits (62), Expect = 2.1
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Query: 10 TSPSPDGENPCKKVHWASGRRRTSSTDSESKSHPDSSKIPRSR-RPSRLTVKYDRGQLQR 68
T P D +P + + G R + S S S S PDS S+ +P + + RG L R
Sbjct: 426 TPPPSDAGSPFQSSPLSLGSRGSGSGGSGSDSEPDSPVFEDSKAKPEQRPSLHSRGMLDR 485
>gi|109255234 centrosomal protein 290kDa [Homo sapiens]
Length = 2479
Score = 28.5 bits (62), Expect = 2.1
Identities = 18/78 (23%), Positives = 35/78 (44%)
Query: 48 IPRSRRPSRLTVKYDRGQLQRWLEMEQWVDAQVQELFQDQATPSEPEIDLEALMDLSTEE 107
+ R + L K + + LE+ + A +E + E ++++ ++D T E
Sbjct: 1727 VERLKSQLALKEKQQKALSRALLELRAEMTAAAEERIISATSQKEAHLNVQQIVDRHTRE 1786
Query: 108 QKTQLEAILGNCPRPTEA 125
KTQ+E + N + EA
Sbjct: 1787 LKTQVEDLNENLLKLKEA 1804
>gi|21040326 SON DNA-binding protein isoform F [Homo sapiens]
Length = 2426
Score = 28.5 bits (62), Expect = 2.1
Identities = 17/46 (36%), Positives = 21/46 (45%)
Query: 11 SPSPDGENPCKKVHWASGRRRTSSTDSESKSHPDSSKIPRSRRPSR 56
SPS P ++ S R RT S S + S + RSR PSR
Sbjct: 1952 SPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSR 1997
>gi|21040314 SON DNA-binding protein isoform B [Homo sapiens]
Length = 2303
Score = 28.5 bits (62), Expect = 2.1
Identities = 17/46 (36%), Positives = 21/46 (45%)
Query: 11 SPSPDGENPCKKVHWASGRRRTSSTDSESKSHPDSSKIPRSRRPSR 56
SPS P ++ S R RT S S + S + RSR PSR
Sbjct: 1952 SPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSR 1997
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.125 0.362
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,298,296
Number of Sequences: 37866
Number of extensions: 276865
Number of successful extensions: 1238
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 47
Number of HSP's that attempted gapping in prelim test: 1181
Number of HSP's gapped (non-prelim): 98
length of query: 145
length of database: 18,247,518
effective HSP length: 92
effective length of query: 53
effective length of database: 14,763,846
effective search space: 782483838
effective search space used: 782483838
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.